Psyllid ID: psy3446

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Secondary Structure (PSIPRED)
cHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccccccccEEEEcccccccccccHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHccHHHcEEEEEccccccccccccHHHHHHHHHccEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHccEEEEcEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
lflrlktevPHFLEKISAVagdvslpglglsetDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVagdvslpglglsetDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Flexible Loop (DISEMBL)
lflrlkteVPHFLEKIsavagdvslpglgLSETDRELLRTNVNVIFHGaatvrfdekIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKIsavagdvslpglgLSETDRELLRTNVNVIFHGaatvrfdeKIQLAVAINVLGVRAMLELAREIRQLK
Low Complexity Region (SEG)
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Disordered region (IsUnstruct)
****LKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAR******
Disordered Region (DISOPRED)
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Disordered Region (DISEMBL)
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Disordered Region (DISPRO)
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQL*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.542	0.174	0.444	1e-16
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.542	0.174	0.433	2e-16
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.542	0.174	0.433	2e-16
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.542	0.174	0.433	2e-16
A1ZAI5	625	Putative fatty acyl-CoA r	no	N/A	0.542	0.144	0.433	2e-15
Q5ZM72	515	Fatty acyl-CoA reductase	no	N/A	0.542	0.174	0.422	5e-14
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.542	0.174	0.344	1e-12
Q0P5J1	515	Fatty acyl-CoA reductase	no	N/A	0.542	0.174	0.355	5e-11
Q96K12	515	Fatty acyl-CoA reductase	no	N/A	0.542	0.174	0.366	5e-11
Q960W6	516	Putative fatty acyl-CoA r	no	N/A	0.578	0.186	0.360	4e-10

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/90 (44%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RL+ E P F EKI A+  +++ P L LSE D+E++  + NVIFH AATVRF+E ++ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV+  R ++ LA++++ L++F+ + T
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RL+ E P F EKI A+  +++ P L LSE D+E++  + N+IFH AATVRF+E ++ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIESTNIIFHCAATVRFNENLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV+  R ++ LA++++ L++F+ + T
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RL+ E P F EKI A+  +++ P L LSE D+E++  + N+IFH AATVRF+E ++ 
Sbjct: 64  LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV+  R ++ LA++++ L++F+ + T
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RL+ E P F +KI A+  +++ P L LSE D+E++  + NVIFH AATVRF+E ++ 
Sbjct: 64  LFDRLRDENPDFRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV+  R ++ LA++++ L++F+ + T
Sbjct: 124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 60/90 (66%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF  L+ E P  L K+  ++GD++   LG+SE D+ LL  NV+V+FH AATV+FDEK++L
Sbjct: 179 LFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKL 238

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           +V IN+LG + ++EL   +  L   + + T
Sbjct: 239 SVTINMLGTKRLVELCHRMLSLDALIHVST 268

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score = 77.0 bits (188), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/90 (42%), Positives = 59/90 (65%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RL+ E P F EKI  +  +++ P L LS   +E L   +N+IFH AATVRF+E ++ 
Sbjct: 64  LFDRLREEQPDFKEKIIVITSELTQPELDLSNPVKEKLIECINIIFHCAATVRFNETLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NVL  + +L LA+++  L++F+ + T
Sbjct: 124 AVQLNVLSTKQLLSLAQQMTNLEVFMHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF +L+ E P   +K+ A++ +++ P L +S+ D++ L   ++++FH AATVRF+E ++ 
Sbjct: 64  LFDKLRDEQPDCAQKVIAISSELTQPELDMSKEDQDTLIDCIDIVFHCAATVRFNESLRD 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           A+ +NV+  R +L LA+++++L++F+ + T
Sbjct: 124 AMQLNVIATRQLLYLAQKMKKLEVFIHVST 153

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 58/90 (64%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF ++K   P+  EKI A++ D++     +S+ D + L ++ N+IFH AATVRFD+ ++ 
Sbjct: 64  LFEKVKEVCPNVHEKIRAISADLNQNDFAISKEDMKELLSHTNIIFHCAATVRFDDHLRH 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV   + +L +A ++ +L+ F+ + T
Sbjct: 124 AVQLNVTATQQLLLMASQMPKLEAFIHIST 153

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 56/90 (62%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF ++K   P+  EKI A+  D++     +S+ D + L +  N+IFH AATVRFD+ ++ 
Sbjct: 64  LFEKVKEVCPNVHEKIRAIYADLNQNDFAISKEDMQELLSCTNIIFHCAATVRFDDTLRH 123

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AV +NV   R +L +A ++ +L+ F+ + T
Sbjct: 124 AVQLNVTATRQLLLMASQMPKLEAFIHIST 153

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 70  RAMLELAREIRQLKLFLRLKT-EVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVI 128
           +++ E   E+++  +F + K  ++   L KI  + GDV L  LG+S  DR+ L  NVNV+
Sbjct: 52  KSVQERLEELKKNSVFDKFKELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVV 111

Query: 129 FHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQL 165
           FH AAT+ F + ++    IN+ G R ++EL ++I+ L
Sbjct: 112 FHSAATLDFFQSLKETTNINLRGTRRVVELCQQIKNL 148

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
328720030	552	PREDICTED: putative fatty acyl-CoA reduc	0.506	0.152	0.595	1e-22
326510115	552	predicted protein [Hordeum vulgare subsp	0.506	0.152	0.595	2e-22
193622556	551	PREDICTED: putative fatty acyl-CoA reduc	0.542	0.163	0.588	2e-21
328720032	499	PREDICTED: putative fatty acyl-CoA reduc	0.524	0.174	0.597	3e-21
328720028	553	PREDICTED: putative fatty acyl-CoA reduc	0.542	0.162	0.566	7e-21
195109807	521	GI24527 [Drosophila mojavensis] gi|19391	0.566	0.180	0.446	4e-19
156541926	545	PREDICTED: putative fatty acyl-CoA reduc	0.596	0.181	0.49	6e-19
345496235	520	PREDICTED: putative fatty acyl-CoA reduc	0.542	0.173	0.488	9e-19
195054726	519	GH23697 [Drosophila grimshawi] gi|193896	0.566	0.181	0.446	1e-18
383858922	517	PREDICTED: putative fatty acyl-CoA reduc	0.506	0.162	0.523	3e-18

>gi|328720030|ref|XP_001944359.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/84 (59%), Positives = 65/84 (77%)

Query: 83  KLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQ 142
           +LF+RLK E P F  KISA+AGD SLPGLG+S  DR+ L  NVN++FH AAT+RFDE I+
Sbjct: 119 RLFMRLKHERPKFYHKISAIAGDASLPGLGISPRDRQTLAENVNIVFHAAATIRFDEHIR 178

Query: 143 LAVAINVLGVRAMLELAREIRQLK 166
            A+ INVLG R ++ LA+E+ +LK
Sbjct: 179 TAININVLGTREIINLAKEMTKLK 202

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326510115|dbj|BAJ87274.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/84 (59%), Positives = 64/84 (76%)

Query: 83  KLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQ 142
           +LF+RLK E P F  KISA+AGD SLPGLG+S  DR+ L  NVN++FH AAT+RFDE I+
Sbjct: 119 RLFMRLKHERPKFYHKISAIAGDASLPGLGISSCDRQKLAENVNIVFHAAATIRFDEHIR 178

Query: 143 LAVAINVLGVRAMLELAREIRQLK 166
            A+ INVLG R ++ LA+E+  LK
Sbjct: 179 TAININVLGTREIINLAKEMTNLK 202

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/90 (58%), Positives = 64/90 (71%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RLK EVP +  K+S VAGD SLPGLGLS + R  L   VN+IFHGAATVRFDE I++
Sbjct: 118 LFKRLKHEVPKYYHKVSGVAGDCSLPGLGLSVSSRNTLINEVNIIFHGAATVRFDEHIRV 177

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           A+ INV G R +L LAR+I  LK+   + T
Sbjct: 178 AMNINVSGTRELLSLARKITNLKVMAHVST 207

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720032|ref|XP_001949806.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/87 (59%), Positives = 63/87 (72%)

Query: 80  RQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE 139
           + LKLF RLK EVP +  K+S +AGD SLPGLGLS + R  L   VN+IFHGAATVRFDE
Sbjct: 61  QDLKLFKRLKYEVPKYYHKVSGLAGDCSLPGLGLSVSSRNTLIKEVNIIFHGAATVRFDE 120

Query: 140 KIQLAVAINVLGVRAMLELAREIRQLK 166
            I++A+ INV G R M+ LA+ I  LK
Sbjct: 121 HIRVAMDINVSGTREMMNLAKTITNLK 147

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum]

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/90 (56%), Positives = 63/90 (70%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF RLK EVP +  K+S +AGD SLPGLGLS + R  L   VN+IFHGAATVRFDE I++
Sbjct: 119 LFKRLKYEVPKYYHKVSGIAGDCSLPGLGLSVSSRNTLIKEVNIIFHGAATVRFDEHIRV 178

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           A+ INV G R M+ LA+ I  LK+   + T
Sbjct: 179 AMDINVSGTREMMNLAKTITNLKVIAHIST 208

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195109807|ref|XP_001999473.1| GI24527 [Drosophila mojavensis] gi|193916067|gb|EDW14934.1| GI24527 [Drosophila mojavensis]

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/94 (44%), Positives = 68/94 (72%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           +F ++K   P +  +I+ ++GD SLPGLG+S  +RE+++ NVN++ H AATVRFDEK+++
Sbjct: 92  VFAKMKQANPKYRCQITIISGDCSLPGLGISPNEREIIKENVNIVLHSAATVRFDEKLKM 151

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH 94
           A+AINV G + +++LA+EI  LK  + + T   H
Sbjct: 152 AIAINVHGTKELIKLAKEIVHLKALVHVSTAFAH 185

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156541926|ref|XP_001600309.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis]

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/100 (49%), Positives = 70/100 (70%), Gaps = 1/100 (1%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           ++ RLK E P+F + +  + GD+SL  LGLS++DRE L  N++V+FHGAATVRFDE ++ 
Sbjct: 95  VYDRLKKEQPNFSDHVVMIEGDISLGDLGLSKSDREELIENIDVVFHGAATVRFDESLRQ 154

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH-FLEKI 99
           AV INV G + +L  ARE++ LK F+ + T   H  L+KI
Sbjct: 155 AVNINVRGTKLVLMFAREMKNLKAFVHISTAFSHCILKKI 194

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345496235|ref|XP_001602762.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis]

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 66/90 (73%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           +F R+K EVP +  K++A+ GD SLPGLGL+  D+E++   ++++F+ AATVRFDEKI+ 
Sbjct: 75  IFSRMKKEVPKYRHKVTAIPGDCSLPGLGLTALDKEVIMREISIVFNVAATVRFDEKIKQ 134

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
           AVAINV   + ++ELAR I  LK+ + + T
Sbjct: 135 AVAINVNSTKEIMELARRIHNLKVIIHVST 164

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195054726|ref|XP_001994274.1| GH23697 [Drosophila grimshawi] gi|193896144|gb|EDV95010.1| GH23697 [Drosophila grimshawi]

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/94 (44%), Positives = 68/94 (72%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           +F ++K   P +  +I+ ++GD SLPGLG+S  +RE+++ NVN++ H AATVRFDEK+++
Sbjct: 92  VFAKMKQINPKYRCQIAIISGDCSLPGLGISHREREIIKENVNIVLHSAATVRFDEKLKM 151

Query: 61  AVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH 94
           A+AINV G + +++LA+EI  LK  + + T   H
Sbjct: 152 AIAINVHGTKEIIKLAKEIVNLKALVHVSTAFAH 185

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858922|ref|XP_003704948.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata]

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/86 (52%), Positives = 61/86 (70%)

Query: 14  EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAML 73
           + ++ V GDVSLPGLGLS  DR +L   +N+++HGAATVRFDE ++ AV +N  G + ML
Sbjct: 88  KAVTVVNGDVSLPGLGLSPEDRRMLCEKINIVYHGAATVRFDELLKKAVLLNTRGTKQML 147

Query: 74  ELAREIRQLKLFLRLKTEVPHFLEKI 99
           ELA+E++ LKLF  + T   H  EKI
Sbjct: 148 ELAKEMKHLKLFAHISTAYCHLEEKI 173

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0039620	517	CG1443 [Drosophila melanogaste	0.566	0.181	0.446	5.2e-18
FB|FBgn0038450	499	CG17560 [Drosophila melanogast	0.512	0.170	0.430	5.3e-16
UNIPROTKB|E9PNW8	335	FAR1 "Fatty acyl-CoA reductase	0.542	0.268	0.433	1.5e-15
WB|WBGene00022200	536	fard-1 [Caenorhabditis elegans	0.542	0.167	0.4	2.3e-15
FB|FBgn0038451	510	CG14893 [Drosophila melanogast	0.542	0.176	0.455	2.6e-15
UNIPROTKB|E2R4R9	514	FAR1 "Uncharacterized protein"	0.542	0.175	0.422	2.7e-15
MGI|MGI:1914670	515	Far1 "fatty acyl CoA reductase	0.542	0.174	0.444	3.4e-15
UNIPROTKB|A5PJQ0	515	FAR1 "Uncharacterized protein"	0.542	0.174	0.433	4.4e-15
FB|FBgn0034145	625	CG5065 [Drosophila melanogaste	0.542	0.144	0.433	5e-15
UNIPROTKB|F1NTE5	456	FAR2 "Uncharacterized protein"	0.590	0.214	0.377	5.5e-15

FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)]

 Score = 226 (84.6 bits), Expect = 5.2e-18, P = 5.2e-18
 Identities = 42/94 (44%), Positives = 66/94 (70%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             +F ++K   P +  +I+ ++GD SLPGLG+S  +RE +  NVN++ H AATVRFDEK+++
Sbjct:    91 VFAKMKQVNPKYRCQITIISGDCSLPGLGISADERETIMENVNIVLHSAATVRFDEKLKM 150

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH 94
             A+AINV G + +++LA+EI  LK  + + T   H
Sbjct:   151 AIAINVHGTKEIIKLAKEIVNLKALVHVSTAFAH 184

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0038450 CG17560 [Drosophila melanogaster (taxid:7227)]

 Score = 194 (73.4 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
 Identities = 37/86 (43%), Positives = 60/86 (69%)

Query:     5 LKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAI 64
             L+T+ P  L+++  +AGD   P LG+S++D+ +L   V ++ HGAATVRFDE + +++AI
Sbjct:    69 LRTK-PDALQRVCPIAGDCLDPDLGISQSDQRILTAEVQIVIHGAATVRFDEALHISLAI 127

Query:    65 NVLGVRAMLELAREIRQLKLFLRLKT 90
             NV   R ML+LA+++ QL  F+ + T
Sbjct:   128 NVRATRLMLQLAKQMTQLVSFVHVST 153

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 198 (74.8 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 39/90 (43%), Positives = 64/90 (71%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF RL+ E P F EKI A+  +++ P L LSE D+E++  + N+IFH AATVRF+E ++ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRD 123

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             AV +NV+  R ++ LA++++ L++F+ + T
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

WB|WBGene00022200 fard-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 202 (76.2 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 36/90 (40%), Positives = 60/90 (66%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF R++ E P   +K+ A+ GD+ +  LG+   D  L+R NVNV+ H AATV+FDE ++ 
Sbjct:    65 LFNRIRQEKPEAFDKLKAIGGDMMVENLGMDPEDVMLIRDNVNVVIHSAATVKFDEHLRA 124

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             AV +NV+G + +++L  +I+ LK+ + + T
Sbjct:   125 AVTMNVIGTKRIIDLCHQIKDLKVLVHVST 154

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

FB|FBgn0038451 CG14893 [Drosophila melanogaster (taxid:7227)]

 Score = 201 (75.8 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 41/90 (45%), Positives = 62/90 (68%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF  L    P  L++I  +AGD   P LG++ +DR+LL + V+++ HGAATVRF+E + +
Sbjct:    75 LFEVLLKAKPDALKRIFVIAGDCLDPDLGINRSDRKLLVSEVHIVIHGAATVRFNEPLHV 134

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             A+AIN  G R ML+LA+E+ QL+ +L + T
Sbjct:   135 ALAINTRGTRLMLQLAKEMLQLEAYLHIST 164

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 201 (75.8 bits), Expect = 2.7e-15, P = 2.7e-15
 Identities = 38/90 (42%), Positives = 65/90 (72%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF RL+ E P F EK+ A+  +++ P L LSE D+E++  ++N+IFH AATVRF+E ++ 
Sbjct:    64 LFDRLRDENPDFREKVIAINSELTQPKLALSEEDKEIIIDSINIIFHCAATVRFNENLRD 123

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             AV +NV+  R ++ LA++++ L++F+ + T
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)]

 Score = 200 (75.5 bits), Expect = 3.4e-15, P = 3.4e-15
 Identities = 40/90 (44%), Positives = 64/90 (71%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF RL+ E P F EKI A+  +++ P L LSE D+E++  + NVIFH AATVRF+E ++ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRD 123

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             AV +NV+  R ++ LA++++ L++F+ + T
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=ISO

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=ISO

UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 199 (75.1 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 39/90 (43%), Positives = 64/90 (71%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF RL+ E P F EKI A+  +++ P L LSE D+E++  + N+IFH AATVRF+E ++ 
Sbjct:    64 LFDRLRDENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNIIFHCAATVRFNENLRD 123

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             AV +NV+  R ++ LA++++ L++F+ + T
Sbjct:   124 AVQLNVIATRQLILLAQQMKNLEVFMHVST 153

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)]

 Score = 200 (75.5 bits), Expect = 5.0e-15, P = 5.0e-15
 Identities = 39/90 (43%), Positives = 60/90 (66%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             LF  L+ E P  L K+  ++GD++   LG+SE D+ LL  NV+V+FH AATV+FDEK++L
Sbjct:   179 LFESLRQEKPKELSKVIPISGDITSEELGISEKDQNLLCRNVSVVFHSAATVKFDEKLKL 238

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKT 90
             +V IN+LG + ++EL   +  L   + + T
Sbjct:   239 SVTINMLGTKRLVELCHRMLSLDALIHVST 268

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NTE5 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 197 (74.4 bits), Expect = 5.5e-15, P = 5.5e-15
 Identities = 37/98 (37%), Positives = 66/98 (67%)

Query:     1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
             +F R++ + P+F EKI  +  +++ P L +S  D E L T VN++FH AATVRFDE ++ 
Sbjct:     5 VFDRVREDCPNFHEKIKPINAELTQPKLAISAEDEEELLTRVNIVFHCAATVRFDEPLKH 64

Query:    61 AVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEK 98
             A+ +N +G + +LELA+++++L+ F+ + T   + + K
Sbjct:    65 ALQLNAMGTQRLLELAQQMQKLEAFIHISTAYANCVRK 102

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	166
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	2e-27
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	2e-27
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-25
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-23
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-10
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	5e-10
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	7e-10
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	7e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	9e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-09
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	5e-09
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	2e-08
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	2e-08
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-07
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-07
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	8e-07
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-05
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-05
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	0.003
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	0.003

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score =  104 bits (261), Expect = 2e-27
 Identities = 43/90 (47%), Positives = 59/90 (65%)

Query: 77  REIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR 136
           RE+ + KLF R +   P F  KI  + GD+S P LGLS+ D + L   VN+I H AATV 
Sbjct: 47  RELLKDKLFDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVT 106

Query: 137 FDEKIQLAVAINVLGVRAMLELAREIRQLK 166
           FDE++  A++INVLG   +LELA+  ++LK
Sbjct: 107 FDERLDEALSINVLGTLRLLELAKRCKKLK 136

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score =  103 bits (260), Expect = 2e-27
 Identities = 41/86 (47%), Positives = 56/86 (65%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
           LF R +   P F  KI  + GD+S P LGLS+ D + L   VN+I H AATV FDE++  
Sbjct: 54  LFDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDE 113

Query: 61  AVAINVLGVRAMLELAREIRQLKLFL 86
           A++INVLG   +LELA+  ++LK F+
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFV 139

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 96.9 bits (242), Expect = 3e-25
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 5/95 (5%)

Query: 71  AMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFH 130
           A+  L +E+ +  LF RLK      LE+I  VAGD+S P LGLS+ D + L   V+VI H
Sbjct: 37  ALERLRQELLKYGLFDRLKA-----LERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIH 91

Query: 131 GAATVRFDEKIQLAVAINVLGVRAMLELAREIRQL 165
            AATV F E      A NVLG R +L LA+++++L
Sbjct: 92  NAATVNFVEPYSDLRATNVLGTREVLRLAKQMKKL 126

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 91.9 bits (229), Expect = 2e-23
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query: 8   EVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVL 67
           +    LE+I  VAGD+S P LGLS+ D + L   V+VI H AATV F E      A NVL
Sbjct: 52  DRLKALERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYSDLRATNVL 111

Query: 68  GVRAMLELAREIRQL 82
           G R +L LA+++++L
Sbjct: 112 GTREVLRLAKQMKKL 126

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 75  LAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAAT 134
           L R I  LK    L       L +I  V GD+S P LGLS+ D + L   V+VI H  A 
Sbjct: 41  LERLIDNLK-EYGLNLWDELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGAN 99

Query: 135 VRF---DEKIQLAVAINVLGVRAMLELA 159
           V +    E++      NVLG + +L+LA
Sbjct: 100 VNWVYPYEEL---KPANVLGTKELLKLA 124

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 12  FLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLG 68
            L +I  V GD+S P LGLS+ D + L   V+VI H  A V +    E++      NVLG
Sbjct: 60  ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEEL---KPANVLG 116

Query: 69  VRAMLELA 76
            + +L+LA
Sbjct: 117 TKELLKLA 124

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 55.9 bits (135), Expect = 7e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 14  EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVR 70
           E+I  VAGD+S P LGLS+ + E L  NV+ I H  A V +     +++ A   NVLG R
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGA---NVLGTR 117

Query: 71  AMLELA 76
            +L LA
Sbjct: 118 EVLRLA 123

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 55.9 bits (135), Expect = 7e-10
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 6/66 (9%)

Query: 97  EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVR 153
           E+I  VAGD+S P LGLS+ + E L  NV+ I H  A V +     +++ A   NVLG R
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGA---NVLGTR 117

Query: 154 AMLELA 159
            +L LA
Sbjct: 118 EVLRLA 123

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 55.5 bits (134), Expect = 9e-10
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 74  ELAREIRQLKLFLRLKTEV---------PHFLEKISAVAGDVSLPGLGLSETDRELLRTN 124
            L     ++ + +R ++               +++  + GD++ P LGLS      L   
Sbjct: 17  RLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPNLGLSAAASRELAGK 76

Query: 125 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQ 164
           V+ + H AA+  F    + A   N+ G   +LELA  +  
Sbjct: 77  VDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDI 116

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 21/84 (25%), Positives = 35/84 (41%)

Query: 2   FLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLA 61
                 E     +++  + GD++ P LGLS      L   V+ + H AA+  F    + A
Sbjct: 37  AHERIEEAGLEADRVRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDA 96

Query: 62  VAINVLGVRAMLELAREIRQLKLF 85
              N+ G   +LELA  +   +  
Sbjct: 97  WRTNIDGTEHVLELAARLDIQRFH 120

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 53.7 bits (129), Expect = 5e-09
 Identities = 27/78 (34%), Positives = 44/78 (56%)

Query: 13  LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAM 72
           L K+  V G+V    LGL     + +   V+VI + AA   FDE+  +A+ IN  G   +
Sbjct: 191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHL 250

Query: 73  LELAREIRQLKLFLRLKT 90
           +  A++ ++LKLFL++ T
Sbjct: 251 MSFAKKCKKLKLFLQVST 268

Length = 605

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 14  EKISAVAGDVSLPGLGLSETD-RELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAM 72
           EK++ V GD+S   LG+ +++ RE +   ++++ + AAT  FDE+  +A+ IN LG   +
Sbjct: 84  EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNV 143

Query: 73  LELAREIRQLKLFLRLKT 90
           L  A++  ++K+ L + T
Sbjct: 144 LNFAKKCVKVKMLLHVST 161

Length = 491

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 17/123 (13%)

Query: 54  FDEKIQLAVAINV----LGVRA------MLELAREIRQLKLFLRLKTEVPHFL-----EK 98
           F EKI L V  NV    L +RA         L  E+    LF  L+ ++   L     EK
Sbjct: 27  FVEKI-LRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK 85

Query: 99  ISAVAGDVSLPGLGLSETD-RELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLE 157
           ++ V GD+S   LG+ +++ RE +   ++++ + AAT  FDE+  +A+ IN LG   +L 
Sbjct: 86  VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLN 145

Query: 158 LAR 160
            A+
Sbjct: 146 FAK 148

Length = 491

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 4   RLKTEVPHFL-------EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE 56
           RL+     +        +++  VAGD++ P LGLSE   + L  NV++I H AA V    
Sbjct: 43  RLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVF 102

Query: 57  KIQLAVAINVLGVRAMLELA 76
                   NVLG   +L LA
Sbjct: 103 PYSELRGANVLGTAEVLRLA 122

Length = 382

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 87  RLKTEVPHFL-------EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE 139
           RL+     +        +++  VAGD++ P LGLSE   + L  NV++I H AA V    
Sbjct: 43  RLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVF 102

Query: 140 KIQLAVAINVLGVRAMLELA 159
                   NVLG   +L LA
Sbjct: 103 PYSELRGANVLGTAEVLRLA 122

Length = 382

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 47.2 bits (112), Expect = 8e-07
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 71  AMLELAREIRQLKLFLRL-----KTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNV 125
           A+  L  E+   +LF  L     K+     L K+  V G+V    LGL     + +   V
Sbjct: 161 AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEV 220

Query: 126 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK 166
           +VI + AA   FDE+  +A+ IN  G   ++  A++ ++LK
Sbjct: 221 DVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLK 261

Length = 605

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)

Query: 14  EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAAT--VRFDEKIQLAVAINVLGVRA 71
           +++  + GD++ PGLGLSE D   L  +++ + H AA   +  DE+ Q A   NV G R 
Sbjct: 51  DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAA--NVDGTRN 107

Query: 72  MLELAREIR 80
           ++ELA  ++
Sbjct: 108 VVELAERLQ 116

Length = 657

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)

Query: 97  EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAAT--VRFDEKIQLAVAINVLGVRA 154
           +++  + GD++ PGLGLSE D   L  +++ + H AA   +  DE+ Q A   NV G R 
Sbjct: 51  DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAA--NVDGTRN 107

Query: 155 MLELAREIR 163
           ++ELA  ++
Sbjct: 108 VVELAERLQ 116

Length = 657

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 12   FLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATV 52
            +  +I  V GD+S    GLS+     L   V+VI H  A V
Sbjct: 1032 WASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALV 1072

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 95   FLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATV 135
            +  +I  V GD+S    GLS+     L   V+VI H  A V
Sbjct: 1032 WASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALV 1072

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
KOG1221|consensus	467		99.71
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.67
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.66
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.65
PLN02996	491	fatty acyl-CoA reductase	99.64
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.61
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.58
PLN02503	605	fatty acyl-CoA reductase 2	99.57
KOG1221|consensus	467		99.56
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.44
PLN02503	605	fatty acyl-CoA reductase 2	99.35
PLN02996	491	fatty acyl-CoA reductase	99.28
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.24
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.23
PRK07201	657	short chain dehydrogenase; Provisional	99.09
KOG0747|consensus	331		99.09
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.08
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.06
KOG1371|consensus	343		99.06
PLN02572	442	UDP-sulfoquinovose synthase	99.04
PLN00198	338	anthocyanidin reductase; Provisional	99.03
PLN02427	386	UDP-apiose/xylose synthase	99.01
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.96
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.91
PLN02650	351	dihydroflavonol-4-reductase	98.9
PLN02214	342	cinnamoyl-CoA reductase	98.87
PLN02260	668	probable rhamnose biosynthetic enzyme	98.85
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.85
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.84
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.81
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.81
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.8
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.72
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.7
PLN02206	442	UDP-glucuronate decarboxylase	98.67
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.65
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.61
KOG1502|consensus	327		98.58
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.57
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.57
KOG1429|consensus	350		98.55
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.53
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.53
PLN02653	340	GDP-mannose 4,6-dehydratase	98.49
PLN02686	367	cinnamoyl-CoA reductase	98.48
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.47
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.46
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.42
KOG1430|consensus	361		98.42
PLN02240	352	UDP-glucose 4-epimerase	98.41
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.41
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.4
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.39
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.37
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.3
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.28
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.25
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.23
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.19
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.12
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.08
PRK05865	854	hypothetical protein; Provisional	97.99
PLN02778	298	3,5-epimerase/4-reductase	97.98
PRK07201	657	short chain dehydrogenase; Provisional	97.96
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	97.94
PLN02583	297	cinnamoyl-CoA reductase	97.93
CHL00194	317	ycf39 Ycf39; Provisional	97.86
PLN02260	668	probable rhamnose biosynthetic enzyme	97.82
KOG1502|consensus	327		97.66
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	97.6
PLN02427	386	UDP-apiose/xylose synthase	97.54
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	97.53
PLN03209	576	translocon at the inner envelope of chloroplast su	97.53
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.45
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	97.34
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.33
PLN02166	436	dTDP-glucose 4,6-dehydratase	97.3
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	97.28
PRK06197	306	short chain dehydrogenase; Provisional	97.26
PLN02206	442	UDP-glucuronate decarboxylase	97.25
PLN02572	442	UDP-sulfoquinovose synthase	97.22
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.19
PLN00198	338	anthocyanidin reductase; Provisional	97.17
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	97.14
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.12
PRK06194	287	hypothetical protein; Provisional	97.11
PRK06482	276	short chain dehydrogenase; Provisional	97.11
PRK12320	699	hypothetical protein; Provisional	97.11
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.05
PRK12746	254	short chain dehydrogenase; Provisional	97.05
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.01
PLN02650	351	dihydroflavonol-4-reductase	97.0
PLN02214	342	cinnamoyl-CoA reductase	96.99
PRK06940	275	short chain dehydrogenase; Provisional	96.95
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.94
PRK09186	256	flagellin modification protein A; Provisional	96.91
KOG1372|consensus	376		96.89
PLN00016	378	RNA-binding protein; Provisional	96.85
KOG1431|consensus	315		96.85
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	96.85
CHL00194	317	ycf39 Ycf39; Provisional	96.85
PRK05717	255	oxidoreductase; Validated	96.84
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	96.81
KOG1430|consensus	361		96.81
PRK07774	250	short chain dehydrogenase; Provisional	96.79
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	96.78
PRK06180	277	short chain dehydrogenase; Provisional	96.75
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.71
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.69
PLN02253	280	xanthoxin dehydrogenase	96.69
PLN02778	298	3,5-epimerase/4-reductase	96.67
PRK06182	273	short chain dehydrogenase; Validated	96.67
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.66
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.66
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.66
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.66
PRK07814	263	short chain dehydrogenase; Provisional	96.64
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.63
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.63
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.62
KOG1371|consensus	343		96.62
PRK06128	300	oxidoreductase; Provisional	96.6
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	96.55
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.54
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	96.52
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.5
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.49
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.49
PRK06179	270	short chain dehydrogenase; Provisional	96.48
PRK09135	249	pteridine reductase; Provisional	96.47
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.45
PRK05993	277	short chain dehydrogenase; Provisional	96.42
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.4
PRK08263	275	short chain dehydrogenase; Provisional	96.37
PRK06398	258	aldose dehydrogenase; Validated	96.36
PRK12937	245	short chain dehydrogenase; Provisional	96.36
PRK07326	237	short chain dehydrogenase; Provisional	96.35
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.32
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	96.3
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.29
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	96.28
PRK07806	248	short chain dehydrogenase; Provisional	96.28
PRK07067	257	sorbitol dehydrogenase; Provisional	96.28
PRK06123	248	short chain dehydrogenase; Provisional	96.27
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.25
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.23
PRK08267	260	short chain dehydrogenase; Provisional	96.19
PRK12827	249	short chain dehydrogenase; Provisional	96.16
PLN02695	370	GDP-D-mannose-3',5'-epimerase	96.16
PRK06701	290	short chain dehydrogenase; Provisional	96.15
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.15
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.12
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	96.12
PRK07041	230	short chain dehydrogenase; Provisional	96.11
PRK06138	252	short chain dehydrogenase; Provisional	96.09
PRK10538	248	malonic semialdehyde reductase; Provisional	96.07
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.06
PRK07775	274	short chain dehydrogenase; Provisional	96.04
PRK06181	263	short chain dehydrogenase; Provisional	96.04
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.03
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.03
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.02
PRK07856	252	short chain dehydrogenase; Provisional	96.01
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.0
PRK07024	257	short chain dehydrogenase; Provisional	96.0
PLN02653	340	GDP-mannose 4,6-dehydratase	96.0
PRK06500	249	short chain dehydrogenase; Provisional	95.98
PRK06841	255	short chain dehydrogenase; Provisional	95.97
PRK06914	280	short chain dehydrogenase; Provisional	95.95
PRK08264	238	short chain dehydrogenase; Validated	95.95
PRK05876	275	short chain dehydrogenase; Provisional	95.94
PRK09134	258	short chain dehydrogenase; Provisional	95.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.88
PRK08219	227	short chain dehydrogenase; Provisional	95.87
PRK07060	245	short chain dehydrogenase; Provisional	95.87
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	95.87
PRK05693	274	short chain dehydrogenase; Provisional	95.86
PLN02686	367	cinnamoyl-CoA reductase	95.86
PRK12939	250	short chain dehydrogenase; Provisional	95.85
PRK09291	257	short chain dehydrogenase; Provisional	95.85
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.84
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.83
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.81
PRK08643	256	acetoin reductase; Validated	95.8
PRK05854	313	short chain dehydrogenase; Provisional	95.79
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.79
PRK05875	276	short chain dehydrogenase; Provisional	95.78
PRK08226	263	short chain dehydrogenase; Provisional	95.77
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.73
PRK07063	260	short chain dehydrogenase; Provisional	95.72
PRK05866	293	short chain dehydrogenase; Provisional	95.68
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.68
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.67
PLN03209	576	translocon at the inner envelope of chloroplast su	95.67
PRK08251	248	short chain dehydrogenase; Provisional	95.64
PRK08628	258	short chain dehydrogenase; Provisional	95.61
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.59
PRK12743	256	oxidoreductase; Provisional	95.59
PRK08278	273	short chain dehydrogenase; Provisional	95.58
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.57
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
PRK05867	253	short chain dehydrogenase; Provisional	95.56
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.54
PRK06196	315	oxidoreductase; Provisional	95.53
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.53
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.52
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.51
KOG1205|consensus	282		95.49
PRK12367	245	short chain dehydrogenase; Provisional	95.49
PRK12829	264	short chain dehydrogenase; Provisional	95.47
PRK05855	582	short chain dehydrogenase; Validated	95.47
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.43
PRK07454	241	short chain dehydrogenase; Provisional	95.42
PRK07109	334	short chain dehydrogenase; Provisional	95.41
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.4
PRK05650	270	short chain dehydrogenase; Provisional	95.4
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.35
PRK06114	254	short chain dehydrogenase; Provisional	95.33
PRK07677	252	short chain dehydrogenase; Provisional	95.33
PRK07102	243	short chain dehydrogenase; Provisional	95.28
PRK07985	294	oxidoreductase; Provisional	95.28
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	95.28
PRK07890	258	short chain dehydrogenase; Provisional	95.24
PRK07478	254	short chain dehydrogenase; Provisional	95.22
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.22
PRK08265	261	short chain dehydrogenase; Provisional	95.2
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.2
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.19
PLN02240	352	UDP-glucose 4-epimerase	95.18
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.16
PRK12742	237	oxidoreductase; Provisional	95.11
PRK07069	251	short chain dehydrogenase; Validated	95.08
PRK09072	263	short chain dehydrogenase; Provisional	95.08
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	95.07
PRK09242	257	tropinone reductase; Provisional	95.07
PRK06523	260	short chain dehydrogenase; Provisional	95.06
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.03
PRK07577	234	short chain dehydrogenase; Provisional	95.02
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	95.0
PRK07576	264	short chain dehydrogenase; Provisional	94.94
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.88
PRK05865	854	hypothetical protein; Provisional	94.86
PRK06198	260	short chain dehydrogenase; Provisional	94.86
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.79
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	94.78
PLN00015	308	protochlorophyllide reductase	94.77
PRK09009	235	C factor cell-cell signaling protein; Provisional	94.73
PRK07074	257	short chain dehydrogenase; Provisional	94.71
PRK07578	199	short chain dehydrogenase; Provisional	94.71
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.7
PRK07023	243	short chain dehydrogenase; Provisional	94.69
PRK05884	223	short chain dehydrogenase; Provisional	94.62
PRK06101	240	short chain dehydrogenase; Provisional	94.61
PRK06139	330	short chain dehydrogenase; Provisional	94.61
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	94.6
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	94.58
PRK06172	253	short chain dehydrogenase; Provisional	94.58
PRK12828	239	short chain dehydrogenase; Provisional	94.57
PRK08339	263	short chain dehydrogenase; Provisional	94.57
COG0300	265	DltE Short-chain dehydrogenases of various substra	94.53
PRK08177	225	short chain dehydrogenase; Provisional	94.53
KOG2865|consensus	391		94.52
PRK06953	222	short chain dehydrogenase; Provisional	94.51
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.47
PRK12747	252	short chain dehydrogenase; Provisional	94.47
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	94.47
PRK06940	275	short chain dehydrogenase; Provisional	94.46
PRK08324	681	short chain dehydrogenase; Validated	94.45
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	94.43
PRK07825	273	short chain dehydrogenase; Provisional	94.42
PRK10675	338	UDP-galactose-4-epimerase; Provisional	94.32
PRK05872	296	short chain dehydrogenase; Provisional	94.29
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.26
PRK12744	257	short chain dehydrogenase; Provisional	94.23
PRK07791	286	short chain dehydrogenase; Provisional	94.21
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.2
PRK06949	258	short chain dehydrogenase; Provisional	94.17
PRK07062	265	short chain dehydrogenase; Provisional	94.02
PRK08589	272	short chain dehydrogenase; Validated	94.01
PRK12320	699	hypothetical protein; Provisional	94.01
PRK06484	520	short chain dehydrogenase; Validated	93.97
PLN02583	297	cinnamoyl-CoA reductase	93.92
PRK06124	256	gluconate 5-dehydrogenase; Provisional	93.83
KOG1205|consensus	282		93.83
PRK07904	253	short chain dehydrogenase; Provisional	93.8
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.79
PRK07831	262	short chain dehydrogenase; Provisional	93.69
PRK06057	255	short chain dehydrogenase; Provisional	93.67
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	93.65
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	93.59
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.57
PRK06483	236	dihydromonapterin reductase; Provisional	93.56
PLN00106	323	malate dehydrogenase	93.26
PRK07832	272	short chain dehydrogenase; Provisional	93.16
PRK07035	252	short chain dehydrogenase; Provisional	93.06
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	92.87
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	92.68
PRK06484	520	short chain dehydrogenase; Validated	92.66
PRK08017	256	oxidoreductase; Provisional	92.53
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	92.5
PLN02253	280	xanthoxin dehydrogenase	92.4
PRK08703	239	short chain dehydrogenase; Provisional	92.39
PRK12935	247	acetoacetyl-CoA reductase; Provisional	92.34
PRK09135	249	pteridine reductase; Provisional	92.21
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	92.19
PRK06482	276	short chain dehydrogenase; Provisional	92.16
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	92.06
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	92.06
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	92.05
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	92.01
PRK06523	260	short chain dehydrogenase; Provisional	91.63
PRK06125	259	short chain dehydrogenase; Provisional	91.63
PRK08340	259	glucose-1-dehydrogenase; Provisional	91.62
PRK06924	251	short chain dehydrogenase; Provisional	91.58
KOG1429|consensus	350		91.22
PRK05717	255	oxidoreductase; Validated	91.21
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	91.2
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	91.16
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	91.15
PRK08264	238	short chain dehydrogenase; Validated	91.14
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	91.02
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	91.0
KOG0747|consensus	331		90.93
PRK06194	287	hypothetical protein; Provisional	90.9
PRK12367	245	short chain dehydrogenase; Provisional	90.77
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	90.55
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.5
PRK07453	322	protochlorophyllide oxidoreductase; Validated	90.49
PTZ00325	321	malate dehydrogenase; Provisional	90.48
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	90.45
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	90.38
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	90.36
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	90.27
PRK07856	252	short chain dehydrogenase; Provisional	90.24
PRK06180	277	short chain dehydrogenase; Provisional	90.22
PLN02780	320	ketoreductase/ oxidoreductase	90.04
PRK09134	258	short chain dehydrogenase; Provisional	89.93
PRK06128	300	oxidoreductase; Provisional	89.88
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	89.85
PRK06179	270	short chain dehydrogenase; Provisional	89.84
PRK12746	254	short chain dehydrogenase; Provisional	89.78
PRK12937	245	short chain dehydrogenase; Provisional	89.71
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	89.53
PRK07067	257	sorbitol dehydrogenase; Provisional	89.31
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	89.3
PRK08278	273	short chain dehydrogenase; Provisional	89.27
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	89.27
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	89.09
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	89.08
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	89.0
PRK07774	250	short chain dehydrogenase; Provisional	88.54
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.34
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.25
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	88.11
PRK08267	260	short chain dehydrogenase; Provisional	88.05
PRK06398	258	aldose dehydrogenase; Validated	87.97
PRK07326	237	short chain dehydrogenase; Provisional	87.96
PRK06123	248	short chain dehydrogenase; Provisional	87.95
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	87.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	87.54
PRK12939	250	short chain dehydrogenase; Provisional	87.28
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.27
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.15
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	87.13
PRK07523	255	gluconate 5-dehydrogenase; Provisional	87.12
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	87.09
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	86.96
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	86.91
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	86.76
PRK06500	249	short chain dehydrogenase; Provisional	86.73
PRK08643	256	acetoin reductase; Validated	86.71
PRK07814	263	short chain dehydrogenase; Provisional	86.61
PRK05876	275	short chain dehydrogenase; Provisional	86.6
PRK05875	276	short chain dehydrogenase; Provisional	86.5
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.49
PRK06182	273	short chain dehydrogenase; Validated	86.11
KOG1208|consensus	314		86.04
PRK06701	290	short chain dehydrogenase; Provisional	85.98
PRK07806	248	short chain dehydrogenase; Provisional	85.88
PRK06914	280	short chain dehydrogenase; Provisional	85.85
PRK05867	253	short chain dehydrogenase; Provisional	85.75
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	85.71
PRK06181	263	short chain dehydrogenase; Provisional	85.66
PRK09072	263	short chain dehydrogenase; Provisional	85.64
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	85.49
PRK09291	257	short chain dehydrogenase; Provisional	85.49
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	85.42
TIGR02415	254	23BDH acetoin reductases. One member of this famil	85.31
PRK07063	260	short chain dehydrogenase; Provisional	85.29
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	85.29
PRK06138	252	short chain dehydrogenase; Provisional	85.27
PRK08303	305	short chain dehydrogenase; Provisional	85.24
PRK07890	258	short chain dehydrogenase; Provisional	85.13
PRK05693	274	short chain dehydrogenase; Provisional	85.1
PRK05866	293	short chain dehydrogenase; Provisional	85.06
PRK10538	248	malonic semialdehyde reductase; Provisional	85.03
PRK08265	261	short chain dehydrogenase; Provisional	85.03
PRK07060	245	short chain dehydrogenase; Provisional	84.98
PRK08085	254	gluconate 5-dehydrogenase; Provisional	84.96
PRK08226	263	short chain dehydrogenase; Provisional	84.95
PRK06841	255	short chain dehydrogenase; Provisional	84.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.85
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	84.57
PRK08263	275	short chain dehydrogenase; Provisional	84.54
PRK07454	241	short chain dehydrogenase; Provisional	84.46
PRK07775	274	short chain dehydrogenase; Provisional	84.46
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.04
PRK07578	199	short chain dehydrogenase; Provisional	83.98
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	83.9
PRK07097	265	gluconate 5-dehydrogenase; Provisional	83.79
PRK07478	254	short chain dehydrogenase; Provisional	83.75
PRK12743	256	oxidoreductase; Provisional	83.57
KOG2774|consensus	366		83.52
PRK07024	257	short chain dehydrogenase; Provisional	83.5
PRK12827	249	short chain dehydrogenase; Provisional	83.45
PRK09242	257	tropinone reductase; Provisional	83.36
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	83.14
PRK07576	264	short chain dehydrogenase; Provisional	83.09
PRK08277	278	D-mannonate oxidoreductase; Provisional	82.68
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	82.61
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	82.34
COG0300	265	DltE Short-chain dehydrogenases of various substra	82.31
PRK05855	582	short chain dehydrogenase; Validated	82.25
PRK06198	260	short chain dehydrogenase; Provisional	82.2
PRK09009	235	C factor cell-cell signaling protein; Provisional	82.19
PRK12744	257	short chain dehydrogenase; Provisional	82.12
PRK05599	246	hypothetical protein; Provisional	81.98
PRK08219	227	short chain dehydrogenase; Provisional	81.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	81.85
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	81.78
PRK06114	254	short chain dehydrogenase; Provisional	81.67
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	81.64
PRK09186	256	flagellin modification protein A; Provisional	81.52
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	81.51
PRK07985	294	oxidoreductase; Provisional	81.09
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	81.01
PRK06197	306	short chain dehydrogenase; Provisional	80.8
KOG2774|consensus	366		80.73
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	80.66
PRK08862	227	short chain dehydrogenase; Provisional	80.62
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	80.36
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	80.2
PRK07677	252	short chain dehydrogenase; Provisional	80.11
PRK06139	330	short chain dehydrogenase; Provisional	80.07

>KOG1221|consensus

Probab=99.71  E-value=3.9e-17  Score=126.29  Aligned_cols=94  Identities=45%  Similarity=0.710  Sum_probs=89.5

Q ss_pred             ChhhhhhhCcCcccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446           1 LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus         1 ~~d~~~~~~~~~~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      +|+.++..+|+..+|+..|.||++++++|+++++.+.+.+++++|||+||+++|..++..++.+|+.||++++++|++..
T Consensus        66 lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~  145 (467)
T KOG1221|consen   66 LFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMV  145 (467)
T ss_pred             HHHHHHhhCccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhh
Confidence            47888888899899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhcccccCcc
Q psy3446          81 QLKLFLRLKTEVPH   94 (166)
Q Consensus        81 ~~~~~~~~ss~~~~   94 (166)
                      +.+.++|+||+|.+
T Consensus       146 ~l~~~vhVSTAy~n  159 (467)
T KOG1221|consen  146 KLKALVHVSTAYSN  159 (467)
T ss_pred             hhheEEEeehhhee
Confidence            99999999999986

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=5.7e-18  Score=123.19  Aligned_cols=137  Identities=19%  Similarity=0.137  Sum_probs=105.0

Q ss_pred             ChhhhhhhCcCcccc--eEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhH---HHHHHhhhhcHHHHH
Q psy3446           1 LFLRLKTEVPHFLEK--ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKI---QLAVAINVLGVRAML   73 (166)
Q Consensus         1 ~~d~~~~~~~~~~~~--~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll   73 (166)
                      ++|++.+++.+...+  ++|+.||+.|..+      +.++++  ++|.|||.||...++++.   ..++..|+.||..++
T Consensus        29 V~DNL~~g~~~~v~~~~~~f~~gDi~D~~~------L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll  102 (329)
T COG1087          29 VLDNLSNGHKIALLKLQFKFYEGDLLDRAL------LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLI  102 (329)
T ss_pred             EEecCCCCCHHHhhhccCceEEeccccHHH------HHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHH
Confidence            479999998887666  6899999999643      555544  689999999999888876   358899999999999


Q ss_pred             HHHHHHhccchhhcccccCccceeeeEeecCCCCC---CCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHH
Q psy3446          74 ELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSL---PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVL  150 (166)
Q Consensus        74 ~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~---~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~  150 (166)
                      +.+++. +++.|+|.||+.+|+.+...|+.++...   .+||.||.-.|++.++..        ..++.++..+|.||+.
T Consensus       103 ~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~--------~a~~~~~v~LRYFN~a  173 (329)
T COG1087         103 EAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAA--------KANPFKVVILRYFNVA  173 (329)
T ss_pred             HHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHH--------HhCCCcEEEEEecccc
Confidence            999984 6889999999999998888898887533   247777777777665332        1223455666777776


Q ss_pred             HH
Q psy3446         151 GV  152 (166)
Q Consensus       151 G~  152 (166)
                      |.
T Consensus       174 GA  175 (329)
T COG1087         174 GA  175 (329)
T ss_pred             cC
Confidence            64

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.66  E-value=1.1e-17  Score=122.19  Aligned_cols=122  Identities=31%  Similarity=0.340  Sum_probs=76.9

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+|++++.||+++|+|||+++++..+.+++|+|||+||.+++..++....++|+.||++++++|.+... ..|+++||.+
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~-~~~~~iSTa~  137 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKR-KRFHYISTAY  137 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG
T ss_pred             hccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccC-cceEEecccc
Confidence            679999999999999999999999999999999999999999999988899999999999999996433 4899999976


Q ss_pred             ccceee--e----------EeecCCCCCCCCCCCHHhHHHHhc------cccEEEEccccc
Q psy3446          93 PHFLEK--I----------SAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATV  135 (166)
Q Consensus        93 ~~~~~~--~----------~~v~gD~~~~~~gls~~~~~~l~~------~~d~i~h~aa~~  135 (166)
                      ......  +          ......-...+|..||+..|+++.      +..+.|+..+.+
T Consensus       138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i  198 (249)
T PF07993_consen  138 VAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGII  198 (249)
T ss_dssp             GTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EE
T ss_pred             ccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence            542111  0          001111111246668888887753      456777766654

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.65  E-value=2.8e-16  Score=117.74  Aligned_cols=113  Identities=29%  Similarity=0.277  Sum_probs=91.3

Q ss_pred             cccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          12 FLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        12 ~~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      ..++|+++.||++.|.|||++..++++.+.+|.|||+||.+++..+|......||.||..++++|..+ +.+.+.++||.
T Consensus        58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsi  136 (382)
T COG3320          58 SADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSI  136 (382)
T ss_pred             hcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeee
Confidence            45799999999999999999999999999999999999999999999999999999999999999985 45678999997


Q ss_pred             Ccccee-----eeEee-------cCCCCCCCCCCCHHhHHHHhccc
Q psy3446          92 VPHFLE-----KISAV-------AGDVSLPGLGLSETDRELLRTNV  125 (166)
Q Consensus        92 ~~~~~~-----~~~~v-------~gD~~~~~~gls~~~~~~l~~~~  125 (166)
                      .+....     ...+.       .+.....+|+.||+..|+++.++
T Consensus       137 sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A  182 (382)
T COG3320         137 SVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREA  182 (382)
T ss_pred             eeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHH
Confidence            653111     11111       11111246899999999998643

>PLN02996 fatty acyl-CoA reductase

Probab=99.64  E-value=6.8e-17  Score=128.10  Aligned_cols=83  Identities=31%  Similarity=0.541  Sum_probs=73.3

Q ss_pred             cceEEEecCCCCCCCCCCHHh-HHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETD-RELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~-~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.||+++|+|||++.+ ++.+.+++|+|||+||.+++..++.....+|+.||.+++++|++....+.++++||.+
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~  163 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY  163 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence            689999999999999998776 5678889999999999999888888889999999999999998855567899999988


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       164 vyG~  167 (491)
T PLN02996        164 VCGE  167 (491)
T ss_pred             EecC
Confidence            7643

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.61  E-value=1.4e-16  Score=119.37  Aligned_cols=117  Identities=27%  Similarity=0.282  Sum_probs=88.6

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-------cceeeeEeecCCCCCCCCCCCHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-------HFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-------~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      .|+.|||++++|.++...+..-..  ..+.|++|.........++.+...       ...+++.++.||+++|.+|++..
T Consensus         2 ~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           2 NVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             eEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            589999999999988543332222  344455443221111111111111       13468999999999999999999


Q ss_pred             hHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         117 DRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       117 ~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .+..|++.+|.|||+||.++|..||..++..||.||.+++++|...
T Consensus        80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g  125 (382)
T COG3320          80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG  125 (382)
T ss_pred             HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999875

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.58  E-value=6.1e-17  Score=118.22  Aligned_cols=116  Identities=32%  Similarity=0.365  Sum_probs=70.1

Q ss_pred             cceeecchhhHHHHHHhhhhcHHHHHHHHHHHhc---cchh-hcccccCc------cceeeeEeecCCCCCCCCCCCHHh
Q psy3446          48 GAATVRFDEKIQLAVAINVLGVRAMLELAREIRQ---LKLF-LRLKTEVP------HFLEKISAVAGDVSLPGLGLSETD  117 (166)
Q Consensus        48 ~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~---~~~~-~~~ss~~~------~~~~~~~~v~gD~~~~~~gls~~~  117 (166)
                      |||++++|.++...+...-... .+.+++|....   ..++ ..+.....      ...+++.++.||++++.+|+++..
T Consensus         2 TGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    2 TGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             E-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             cCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            7888888888754333222211 44444443111   1111 11111110      125789999999999999999999


Q ss_pred             HHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3446         118 RELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQ  164 (166)
Q Consensus       118 ~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~~  164 (166)
                      ++++++++|+||||||.++|..++..++..||.||+++++||.+.++
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~  127 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKR  127 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999996643

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.57  E-value=7.8e-15  Score=118.06  Aligned_cols=97  Identities=31%  Similarity=0.457  Sum_probs=83.3

Q ss_pred             ChhhhhhhCcCc-----ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHH
Q psy3446           1 LFLRLKTEVPHF-----LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus         1 ~~d~~~~~~~~~-----~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      +||.+++..+..     ..|++++.||+++++|||+++.++.+.+++|+|||+||.+++..++...+++|+.|+.+++++
T Consensus       174 lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLel  253 (605)
T PLN02503        174 LFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSF  253 (605)
T ss_pred             hHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHH
Confidence            356666554432     468999999999999999999999998899999999999999888888899999999999999


Q ss_pred             HHHHhccchhhcccccCcccee
Q psy3446          76 AREIRQLKLFLRLKTEVPHFLE   97 (166)
Q Consensus        76 ~~~~~~~~~~~~~ss~~~~~~~   97 (166)
                      |++....+.|+++||.++++..
T Consensus       254 A~~~~~lk~fV~vSTayVyG~~  275 (605)
T PLN02503        254 AKKCKKLKLFLQVSTAYVNGQR  275 (605)
T ss_pred             HHHcCCCCeEEEccCceeecCC
Confidence            9886556779999999987543

>KOG1221|consensus

Probab=99.56  E-value=1.3e-14  Score=112.46  Aligned_cols=123  Identities=40%  Similarity=0.548  Sum_probs=97.4

Q ss_pred             cEEEEcceeecchhhH-HHHHHhh--hhcHHHHH----------HHHHHHhccchhhcccccCccceeeeEeecCCCCCC
Q psy3446          43 NVIFHGAATVRFDEKI-QLAVAIN--VLGVRAML----------ELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLP  109 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~-~~~~~~n--v~gt~~ll----------~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~  109 (166)
                      -.|+-+||+++++.-+ +..+++-  +. +.+++          ++.+.....+.|..++...+...+++.++.||+..+
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~-~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVK-RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcc-eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            6789999999998876 3344432  22 22222          222222223556666666666778999999999999


Q ss_pred             CCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy3446         110 GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK  166 (166)
Q Consensus       110 ~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~~l~  166 (166)
                      .+|+++.+.+.+++++++|+|+||++.|+.++.....+|+.||+++++||+++++|+
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~  148 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLK  148 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999999999999999985

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=4.3e-15  Score=108.01  Aligned_cols=134  Identities=19%  Similarity=0.122  Sum_probs=96.9

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .++..|++||+.|..      .+..++.  ++|+|+|.||..++..++   ..++++|+.||.++|+.+|+.-..-+|++
T Consensus        50 ~~~~~fv~~DI~D~~------~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~H  123 (340)
T COG1088          50 SPRYRFVQGDICDRE------LVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHH  123 (340)
T ss_pred             CCCceEEeccccCHH------HHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEE
Confidence            458999999999953      3666666  699999999999888776   45899999999999999998654457999


Q ss_pred             ccccCccceeeeE--eecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHH
Q psy3446          88 LKTEVPHFLEKIS--AVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLE  157 (166)
Q Consensus        88 ~ss~~~~~~~~~~--~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~  157 (166)
                      +||-.+++.-...  ...+  ..|.-+-|+|..+|.+  +|.++. |+..+|+.|....+..|-|||.|.-|
T Consensus       124 ISTDEVYG~l~~~~~~FtE--~tp~~PsSPYSASKAa--sD~lVr-ay~~TYglp~~ItrcSNNYGPyqfpE  190 (340)
T COG1088         124 ISTDEVYGDLGLDDDAFTE--TTPYNPSSPYSASKAA--SDLLVR-AYVRTYGLPATITRCSNNYGPYQFPE  190 (340)
T ss_pred             eccccccccccCCCCCccc--CCCCCCCCCcchhhhh--HHHHHH-HHHHHcCCceEEecCCCCcCCCcCch
Confidence            9998877543211  1111  1355566677777654  333332 44457788888888889999876433

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.35  E-value=8.8e-12  Score=100.63  Aligned_cols=125  Identities=26%  Similarity=0.340  Sum_probs=90.6

Q ss_pred             ccEEEEcceeecchhhHHH-HHHhhhh-----------cHHHHHHHHH-HHhccchhhcccccCcc-----ceeeeEeec
Q psy3446          42 VNVIFHGAATVRFDEKIQL-AVAINVL-----------GVRAMLELAR-EIRQLKLFLRLKTEVPH-----FLEKISAVA  103 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~-~~~~nv~-----------gt~~ll~l~~-~~~~~~~~~~~ss~~~~-----~~~~~~~v~  103 (166)
                      -..|+-|||++++|..+.+ .++.+-.           ......+..+ +......|..+......     ...++.++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            3689999999999998854 3433211           1111222221 11122334333322221     246899999


Q ss_pred             CCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy3446         104 GDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLK  166 (166)
Q Consensus       104 gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~~l~  166 (166)
                      ||+.++.+|+++..++.+++++|+|||+||.+++..++..+..+|+.|+.+++++|+++++++
T Consensus       199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk  261 (605)
T PLN02503        199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLK  261 (605)
T ss_pred             eeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999999999999998899999999999999999999987653

>PLN02996 fatty acyl-CoA reductase

Probab=99.28  E-value=4.6e-12  Score=100.78  Aligned_cols=122  Identities=27%  Similarity=0.443  Sum_probs=84.2

Q ss_pred             cEEEEcceeecchhhHHH-HHHhhhhcHHHHHHHHH-------------HHhccchhhcccccCcc-----ceeeeEeec
Q psy3446          43 NVIFHGAATVRFDEKIQL-AVAINVLGVRAMLELAR-------------EIRQLKLFLRLKTEVPH-----FLEKISAVA  103 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~-~~~~nv~gt~~ll~l~~-------------~~~~~~~~~~~ss~~~~-----~~~~~~~v~  103 (166)
                      ..|+-|||++++|..+.. .++.+. ....+..++|             +......|..+......     ...++.++.
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~-~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~   90 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQP-NVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP   90 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCC-CCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence            579999999999998854 343321 1111111111             11111122222111111     125788999


Q ss_pred             CCCCCCCCCCCHHh-HHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3446         104 GDVSLPGLGLSETD-RELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQL  165 (166)
Q Consensus       104 gD~~~~~~gls~~~-~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~~l  165 (166)
                      ||+.++.+|+++.+ .+.+.+++|+|||+||.+++..++..+..+|+.||.+++++|++++++
T Consensus        91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~  153 (491)
T PLN02996         91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKV  153 (491)
T ss_pred             cccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999998766 577888999999999999988888999999999999999999987544

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.24  E-value=2.4e-12  Score=98.32  Aligned_cols=125  Identities=19%  Similarity=0.149  Sum_probs=81.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.||++++      +.+..+.+++|+|||+||.....   .+.....++|+.||.++++.|++. +.++|++.||
T Consensus        69 ~~~~~~~~Di~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS  141 (348)
T PRK15181         69 SRFIFIQGDIRKF------TDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAAS  141 (348)
T ss_pred             CceEEEEccCCCH------HHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeec
Confidence            4688999999984      34667778899999999976543   233457889999999999999884 5678999998


Q ss_pred             cCccceeeeEeecCC-CCCC--CCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          91 EVPHFLEKISAVAGD-VSLP--GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD-~~~~--~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      ..+++...-.+..++ ...|  .||.+|...++++.       .++ ..++.+...+|++|++|+.
T Consensus       142 ~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~-------~~~-~~~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        142 SSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYAD-------VFA-RSYEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             hHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHH-------HHH-HHhCCCEEEEEecceeCcC
Confidence            876653221122222 1111  24444444444332       111 1234566678888999873

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.23  E-value=4e-11  Score=89.04  Aligned_cols=73  Identities=29%  Similarity=0.296  Sum_probs=61.4

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh--hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE--KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~--~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++.||++++      +.+.++++++|+|||+||.+....  +.+..+++|+.||+++++.|++ .+++++++.||..+
T Consensus        47 ~~~~~~Di~d~------~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~-~~VkrlVytSS~~v  119 (280)
T PF01073_consen   47 KEYIQGDITDP------ESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARK-AGVKRLVYTSSISV  119 (280)
T ss_pred             eeEEEeccccH------HHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcCcce
Confidence            34999999995      457888899999999999887644  4566899999999999999998 47889999999876


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      ..
T Consensus       120 v~  121 (280)
T PF01073_consen  120 VF  121 (280)
T ss_pred             eE
Confidence            43

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.09  E-value=5.6e-11  Score=97.68  Aligned_cols=108  Identities=25%  Similarity=0.280  Sum_probs=79.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      ++++++.||++++.+++..+.++.+ .++|+|||+||...+........++|+.|+.+++++|++. +.+.|+++||..+
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v  128 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAV  128 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEecccc
Confidence            4789999999999999888878777 8999999999998877776677889999999999999874 4678899998776


Q ss_pred             cceeeeEeecCCCC-----CCCCCCCHHhHHHHhc
Q psy3446          94 HFLEKISAVAGDVS-----LPGLGLSETDRELLRT  123 (166)
Q Consensus        94 ~~~~~~~~v~gD~~-----~~~~gls~~~~~~l~~  123 (166)
                      ++.......+.+..     ...|+.++...|+++.
T Consensus       129 ~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  163 (657)
T PRK07201        129 AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVR  163 (657)
T ss_pred             ccCccCccccccchhhcCCCCchHHHHHHHHHHHH
Confidence            54221111111111     1236667777776653

>KOG0747|consensus

Probab=99.09  E-value=1.9e-12  Score=93.78  Aligned_cols=135  Identities=16%  Similarity=0.105  Sum_probs=98.2

Q ss_pred             cccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          12 FLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        12 ~~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      +.++.+++.+|+.+..+-    .+..+.+++|.|+|.||..+...++   ..+...|+.+|..+++.++...+.+.|+++
T Consensus        55 n~p~ykfv~~di~~~~~~----~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhv  130 (331)
T KOG0747|consen   55 NSPNYKFVEGDIADADLV----LYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHV  130 (331)
T ss_pred             cCCCceEeeccccchHHH----HhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEe
Confidence            456889999999886431    1223345799999999987755544   346778999999999999987788999999


Q ss_pred             cccCccceeeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHH
Q psy3446          89 KTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRA  154 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~  154 (166)
                      ||..+|+........++. .+..+-++++..+++.++  ++. +...+++.|+..+|.-|||||+|
T Consensus       131 STdeVYGds~~~~~~~E~-s~~nPtnpyAasKaAaE~--~v~-Sy~~sy~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  131 STDEVYGDSDEDAVVGEA-SLLNPTNPYAASKAAAEM--LVR-SYGRSYGLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             cccceecCcccccccccc-ccCCCCCchHHHHHHHHH--HHH-HHhhccCCcEEEEeccCccCCCc
Confidence            999888765444444322 344566777777776433  222 33457788888999999999986

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.08  E-value=5.8e-10  Score=85.11  Aligned_cols=81  Identities=38%  Similarity=0.426  Sum_probs=70.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      ++++++.||++++.+|+++..+..+..++|+|||+||.+++..++.....+|+.|+.+++++|.+. ..+.++++||...
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v  139 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISV  139 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccc
Confidence            579999999999999999988888888999999999999887788778889999999999999874 4456889998766


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      +.
T Consensus       140 ~~  141 (367)
T TIGR01746       140 LA  141 (367)
T ss_pred             cC
Confidence            53

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.06  E-value=5.7e-11  Score=89.00  Aligned_cols=97  Identities=20%  Similarity=0.155  Sum_probs=63.2

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+.||++++      +.+.++.+  ++|+||||||......   .....+.+|+.|+.++++.|++. + .+++++||.+
T Consensus        35 ~~~~Dl~d~------~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g-~~~v~~Ss~~  106 (299)
T PRK09987         35 DYCGDFSNP------EGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-G-AWVVHYSTDY  106 (299)
T ss_pred             cccCCCCCH------HHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-C-CeEEEEccce
Confidence            345788874      33555555  5899999999876543   23456789999999999999885 3 3688999988


Q ss_pred             ccceeeeEeecCC-CCCC--CCCCCHHhHHHHh
Q psy3446          93 PHFLEKISAVAGD-VSLP--GLGLSETDRELLR  122 (166)
Q Consensus        93 ~~~~~~~~~v~gD-~~~~--~~gls~~~~~~l~  122 (166)
                      +++..+..|..++ ...|  .||.+|...|+++
T Consensus       107 Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~  139 (299)
T PRK09987        107 VFPGTGDIPWQETDATAPLNVYGETKLAGEKAL  139 (299)
T ss_pred             EECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence            7754433344444 2122  2444454455443

>KOG1371|consensus

Probab=99.06  E-value=3.6e-11  Score=88.76  Aligned_cols=123  Identities=18%  Similarity=0.178  Sum_probs=88.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhHH---HHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKIQ---LAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~~---~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+|.++.+|++|.      +.++++++  ..|.|+|.||.-..+.+++   .+...|+.||.++++.+++.. +..+++.
T Consensus        54 ~~v~f~~~Dl~D~------~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~s  126 (343)
T KOG1371|consen   54 KSVFFVEGDLNDA------EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFS  126 (343)
T ss_pred             CceEEEEeccCCH------HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEe
Confidence            5799999999995      34677766  4799999999988777763   477889999999999999854 8889999


Q ss_pred             cccCccceeeeEeecCCCC----CCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHH
Q psy3446          89 KTEVPHFLEKISAVAGDVS----LPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLG  151 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD~~----~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G  151 (166)
                      ||+.+|+.+...|+.++..    .+.+|-+++..|+++.....        .+......+|.+|++|
T Consensus       127 ssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~--------~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  127 SSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNK--------AYGWKVTGLRYFNVIG  185 (343)
T ss_pred             cceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhc--------cccceEEEEEeccccC
Confidence            9999998877777766432    23455566666665432211        1123344466677766

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.04  E-value=9.8e-11  Score=92.16  Aligned_cols=124  Identities=15%  Similarity=-0.012  Sum_probs=77.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh------HHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK------IQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~------~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      +++++.+|++++      +.+..+++  ++|+|||+||.......      ....+++|+.|+.++++.|++......|+
T Consensus       114 ~v~~v~~Dl~d~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V  187 (442)
T PLN02572        114 EIELYVGDICDF------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLV  187 (442)
T ss_pred             cceEEECCCCCH------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            689999999985      33555555  58999999987543221      12356799999999999998743223788


Q ss_pred             cccccCccceeeeEeecC-----------C----CCC--CCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHH
Q psy3446          87 RLKTEVPHFLEKISAVAG-----------D----VSL--PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINV  149 (166)
Q Consensus        87 ~~ss~~~~~~~~~~~v~g-----------D----~~~--~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv  149 (166)
                      ++||..+|+... .++.+           |    ...  ..||.+|...+.++.       .. ...++.+...+|++|+
T Consensus       188 ~~SS~~vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~-------~~-~~~~gl~~v~lR~~~v  258 (442)
T PLN02572        188 KLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIA-------FT-CKAWGIRATDLNQGVV  258 (442)
T ss_pred             EEecceecCCCC-CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHH-------HH-HHhcCCCEEEEecccc
Confidence            899887765322 11111           1    001  135555554444432       11 1234566677888888


Q ss_pred             HHHH
Q psy3446         150 LGVR  153 (166)
Q Consensus       150 ~G~~  153 (166)
                      ||+.
T Consensus       259 yGp~  262 (442)
T PLN02572        259 YGVR  262 (442)
T ss_pred             cCCC
Confidence            8874

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.03  E-value=5.4e-11  Score=90.44  Aligned_cols=75  Identities=15%  Similarity=0.215  Sum_probs=57.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +++++.+|++++.      .+.++..++|+|||+||.....  .+....+++|+.|+.++++.+++....++++++||..
T Consensus        60 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~  133 (338)
T PLN00198         60 DLKIFGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA  133 (338)
T ss_pred             ceEEEEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecce
Confidence            6889999999853      3666778899999999976443  2233467899999999999987743456788998876


Q ss_pred             ccc
Q psy3446          93 PHF   95 (166)
Q Consensus        93 ~~~   95 (166)
                      +++
T Consensus       134 ~~g  136 (338)
T PLN00198        134 AVS  136 (338)
T ss_pred             eee
Confidence            553

>PLN02427 UDP-apiose/xylose synthase

Probab=99.01  E-value=1.3e-10  Score=89.88  Aligned_cols=74  Identities=12%  Similarity=0.006  Sum_probs=56.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.||++++      +.+.++.+++|+|||+||.....   ......+..|+.|+.++++.|++. . ++|+++||
T Consensus        65 ~~~~~~~~Dl~d~------~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS  136 (386)
T PLN02427         65 GRIQFHRINIKHD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFST  136 (386)
T ss_pred             CCeEEEEcCCCCh------HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEee
Confidence            4699999999985      34677778899999999975432   222345678999999999999874 3 57899999


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..+++
T Consensus       137 ~~vYg  141 (386)
T PLN02427        137 CEVYG  141 (386)
T ss_pred             eeeeC
Confidence            87664

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.00  E-value=1.9e-10  Score=101.51  Aligned_cols=80  Identities=29%  Similarity=0.347  Sum_probs=70.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.||++++.+|++++.+.++..++|+|||+||.+++..++......|+.|+.+++++|++. +.+.++++||..+
T Consensus      1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSA 1112 (1389)
T ss_pred             cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeee
Confidence            479999999999999999999999988999999999999988888777778999999999999874 4567889998755


Q ss_pred             c
Q psy3446          94 H   94 (166)
Q Consensus        94 ~   94 (166)
                      +
T Consensus      1113 ~ 1113 (1389)
T TIGR03443      1113 L 1113 (1389)
T ss_pred             c
Confidence            4

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.96  E-value=1.3e-10  Score=95.71  Aligned_cols=125  Identities=14%  Similarity=0.018  Sum_probs=80.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      ++++++.||++++.     .....+.+++|+|||+||.....   ......+++|+.|+.++++.|++. + ++|+++||
T Consensus       360 ~~~~~~~gDl~d~~-----~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS  432 (660)
T PRK08125        360 PRFHFVEGDISIHS-----EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPST  432 (660)
T ss_pred             CceEEEeccccCcH-----HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcc
Confidence            36899999999853     22345567899999999976532   223457889999999999999985 3 57899999


Q ss_pred             cCccceeeeEeecCCCC----CC------CCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          91 EVPHFLEKISAVAGDVS----LP------GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~----~~------~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      ..+++.....++.++..    .+      .||.+|...++++..       . ...++.+...+|++|++|+.
T Consensus       433 ~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~-------~-~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        433 SEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWA-------Y-GEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             hhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHH-------H-HHhcCCceEEEEEceeeCCC
Confidence            87765322223333321    11      366666666665431       1 11234455567777777764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.96  E-value=1.5e-10  Score=88.64  Aligned_cols=126  Identities=15%  Similarity=0.115  Sum_probs=77.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh-----hHHH-----HHHhhhhcHHHHHHHHHHHhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE-----KIQL-----AVAINVLGVRAMLELAREIRQLK   83 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~-----~~~~-----~~~~nv~gt~~ll~l~~~~~~~~   83 (166)
                      .+++++.+|++++      +.+.++..++|+|||+||......     +...     .+..|+.|+.++++.|++....+
T Consensus        58 ~~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~  131 (353)
T PLN02896         58 DRLRLFRADLQEE------GSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK  131 (353)
T ss_pred             CeEEEEECCCCCH------HHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc
Confidence            4688999999985      346777778999999999865432     2222     34456799999999998743356


Q ss_pred             hhhcccccCccceee-----eEeecCCCCCC------------CCCCCHHhHHHHhccccEEEEccccccchHHHHHHHH
Q psy3446          84 LFLRLKTEVPHFLEK-----ISAVAGDVSLP------------GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVA  146 (166)
Q Consensus        84 ~~~~~ss~~~~~~~~-----~~~v~gD~~~~------------~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~  146 (166)
                      +|+++||..+++...     ..++.++...|            .||.+|...++++..       .+ ..++.+...+|+
T Consensus       132 ~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~-~~~~~~~~~lR~  203 (353)
T PLN02896        132 RVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFK-------YA-KENGIDLVSVIT  203 (353)
T ss_pred             EEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHH-------HH-HHcCCeEEEEcC
Confidence            788888876654211     01233331111            356666666655421       00 122344555677


Q ss_pred             HHHHHHH
Q psy3446         147 INVLGVR  153 (166)
Q Consensus       147 ~Nv~G~~  153 (166)
                      +|+||+.
T Consensus       204 ~~vyGp~  210 (353)
T PLN02896        204 TTVAGPF  210 (353)
T ss_pred             CcccCCC
Confidence            7777764

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.92  E-value=2.4e-10  Score=87.28  Aligned_cols=75  Identities=12%  Similarity=0.022  Sum_probs=56.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++     .+....+.+++|+|||+||....   ..+....+.+|+.|+.++++.|++. . .+++++||
T Consensus        46 ~~~~~~~~Dl~~~-----~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS  118 (347)
T PRK11908         46 PRMHFFEGDITIN-----KEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPST  118 (347)
T ss_pred             CCeEEEeCCCCCC-----HHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEec
Confidence            3689999999843     22345667789999999997543   2333456789999999999999874 3 57899999


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..+++
T Consensus       119 ~~vyg  123 (347)
T PRK11908        119 SEVYG  123 (347)
T ss_pred             ceeec
Confidence            87665

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.91  E-value=2.7e-10  Score=86.12  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=57.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++.      .+..+.+++|+|||+||.....   ......+++|+.|+.++++.+.+.....+++++||
T Consensus        56 ~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS  129 (325)
T PLN02989         56 ERLKLFKADLLDEG------SFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS  129 (325)
T ss_pred             CceEEEeCCCCCch------HHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence            46889999999864      3667778899999999975432   23356788999999999999887433457888888


Q ss_pred             cCcc
Q psy3446          91 EVPH   94 (166)
Q Consensus        91 ~~~~   94 (166)
                      ...+
T Consensus       130 ~~~~  133 (325)
T PLN02989        130 MAAV  133 (325)
T ss_pred             hhhe
Confidence            6543

>PLN02650 dihydroflavonol-4-reductase

Probab=98.90  E-value=2.3e-10  Score=87.52  Aligned_cols=73  Identities=11%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +++++.+|++++.      .+.++.+++|+|||+||.....  .+....+++|+.|+.++++.|++....++|+++||..
T Consensus        57 ~~~~v~~Dl~d~~------~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~  130 (351)
T PLN02650         57 RLTLWKADLAVEG------SFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAG  130 (351)
T ss_pred             ceEEEEecCCChh------hHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchh
Confidence            5889999999864      3667778899999999976432  2233578899999999999998743356788888864


Q ss_pred             c
Q psy3446          93 P   93 (166)
Q Consensus        93 ~   93 (166)
                      .
T Consensus       131 ~  131 (351)
T PLN02650        131 T  131 (351)
T ss_pred             h
Confidence            4

>PLN02214 cinnamoyl-CoA reductase

Probab=98.87  E-value=3.6e-10  Score=86.24  Aligned_cols=68  Identities=16%  Similarity=0.171  Sum_probs=54.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      +++++.+|++++.      .+.+++.++|+|||+||...  ......+++|+.|+.++++.|++. +.++++++||.
T Consensus        61 ~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~  128 (342)
T PLN02214         61 RLILCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSI  128 (342)
T ss_pred             cEEEEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccc
Confidence            5889999999853      46777788999999999753  334567889999999999999874 55678888875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.85  E-value=4.5e-10  Score=92.68  Aligned_cols=126  Identities=19%  Similarity=0.196  Sum_probs=80.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.||++++..      ...+.  .++|+|||+||.......   .....++|+.||.++++.|++....++|+++
T Consensus        57 ~~v~~~~~Dl~d~~~------~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~  130 (668)
T PLN02260         57 PNFKFVKGDIASADL------VNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV  130 (668)
T ss_pred             CCeEEEECCCCChHH------HHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            478999999998642      33332  579999999998765432   2457789999999999999885446789999


Q ss_pred             cccCccceeeeEee---cCCC-CC--CCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          89 KTEVPHFLEKISAV---AGDV-SL--PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        89 ss~~~~~~~~~~~v---~gD~-~~--~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      ||..+++.....+.   .++. ..  ..|+.++...++++...        ...++.+...+|+.|+||+.
T Consensus       131 SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~--------~~~~~l~~vilR~~~VyGp~  193 (668)
T PLN02260        131 STDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAY--------GRSYGLPVITTRGNNVYGPN  193 (668)
T ss_pred             cchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHH--------HHHcCCCEEEECcccccCcC
Confidence            99877654322111   1211 11  13555666555554210        01223444556777777765

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.85  E-value=2.1e-10  Score=85.90  Aligned_cols=124  Identities=21%  Similarity=0.186  Sum_probs=78.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCc-cEEEEcceeecchhhH----HHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNV-NVIFHGAATVRFDEKI----QLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~-d~Vih~aa~~~~~~~~----~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+.++.+|+++..      ....+...+ |+|||+||........    ..++.+|+.|+.++++.|++ ...+++++.|
T Consensus        43 ~~~~~~~d~~~~~------~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~s  115 (314)
T COG0451          43 GVEFVVLDLTDRD------LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFAS  115 (314)
T ss_pred             ccceeeecccchH------HHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeC
Confidence            5789999999863      245566667 9999999998765443    34789999999999999998 5677788877


Q ss_pred             ccCcccee-eeEeecCC--CCCCC--CCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          90 TEVPHFLE-KISAVAGD--VSLPG--LGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        90 s~~~~~~~-~~~~v~gD--~~~~~--~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      |...+... .-.++.++  ...|.  ||.++...|+++..       ++. .++.++..+|+.+++|+.
T Consensus       116 s~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~-------~~~-~~~~~~~ilR~~~vyGp~  176 (314)
T COG0451         116 SVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRA-------YAR-LYGLPVVILRPFNVYGPG  176 (314)
T ss_pred             CCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHH-------HHH-HhCCCeEEEeeeeeeCCC
Confidence            75544322 11134443  12233  56666656655421       111 233445556666666654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.84  E-value=5.4e-10  Score=84.28  Aligned_cols=73  Identities=12%  Similarity=0.164  Sum_probs=56.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc--hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~--~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      ++++++.||++++.      .+..+++++|+|||+||....  ..+....+++|+.|+.++++.+++..+.++++++||.
T Consensus        55 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~  128 (322)
T PLN02662         55 ERLHLFKANLLEEG------SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM  128 (322)
T ss_pred             CceEEEeccccCcc------hHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCH
Confidence            47899999999864      367777899999999997543  2232357889999999999998874355678888885


Q ss_pred             C
Q psy3446          92 V   92 (166)
Q Consensus        92 ~   92 (166)
                      .
T Consensus       129 ~  129 (322)
T PLN02662        129 A  129 (322)
T ss_pred             H
Confidence            3

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.81  E-value=7.1e-10  Score=87.16  Aligned_cols=118  Identities=20%  Similarity=0.142  Sum_probs=74.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      +++++.+|+.++.           ..++|+|||+||.....   .+....+++|+.||.++++.|++. .. +++++||.
T Consensus       169 ~~~~~~~Di~~~~-----------~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~  235 (436)
T PLN02166        169 RFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTS  235 (436)
T ss_pred             ceEEEECcccccc-----------ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcH
Confidence            6788999987652           24689999999975432   234567889999999999999985 33 68899998


Q ss_pred             CccceeeeEeecCCC---CCC-----CCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          92 VPHFLEKISAVAGDV---SLP-----GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        92 ~~~~~~~~~~v~gD~---~~~-----~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      .+|+.....+..++.   ..|     .||.++...|+++..       ++ -.++.++..+|.+|+||+.
T Consensus       236 ~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~-------y~-~~~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        236 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMD-------YH-RGAGVEVRIARIFNTYGPR  297 (436)
T ss_pred             HHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHH-------HH-HHhCCCeEEEEEccccCCC
Confidence            776543222333331   012     255555555554421       10 1223445556777777764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.81  E-value=1.1e-09  Score=82.80  Aligned_cols=74  Identities=16%  Similarity=0.219  Sum_probs=57.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .+++++.+|++++.      .+..+.+++|+|||+||.....  .+....+++|+.|+.++++.+++....++++++||.
T Consensus        56 ~~~~~~~~Dl~~~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~  129 (322)
T PLN02986         56 ERLKLFKADLLEES------SFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST  129 (322)
T ss_pred             CceEEEecCCCCcc------hHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence            46899999999864      3677778899999999976432  233346789999999999999874345678888886


Q ss_pred             Cc
Q psy3446          92 VP   93 (166)
Q Consensus        92 ~~   93 (166)
                      ..
T Consensus       130 ~~  131 (322)
T PLN02986        130 AA  131 (322)
T ss_pred             hh
Confidence            43

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.80  E-value=1.6e-09  Score=82.87  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=56.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHH--------hc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI--------RQ   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~--------~~   81 (166)
                      +++++.+|++++.      .+..+.+  ++|+|||+||......   .....+++|+.|+.++++.|++.        ..
T Consensus        52 ~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~  125 (355)
T PRK10217         52 RFAFEKVDICDRA------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS  125 (355)
T ss_pred             ceEEEECCCcChH------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC
Confidence            5788999999853      3555555  4899999999865432   33568899999999999999763        23


Q ss_pred             cchhhcccccCccc
Q psy3446          82 LKLFLRLKTEVPHF   95 (166)
Q Consensus        82 ~~~~~~~ss~~~~~   95 (166)
                      ..+++++||..+++
T Consensus       126 ~~~~i~~SS~~vyg  139 (355)
T PRK10217        126 AFRFHHISTDEVYG  139 (355)
T ss_pred             ceEEEEecchhhcC
Confidence            45788888876654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.76  E-value=1.1e-09  Score=84.38  Aligned_cols=128  Identities=16%  Similarity=0.049  Sum_probs=75.2

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      ++++.+|+++.      ..+..+..++|+|||+||....    .......+..|+.|+.++++.|++. +.++|+++||.
T Consensus        66 ~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~  138 (370)
T PLN02695         66 HEFHLVDLRVM------ENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSA  138 (370)
T ss_pred             ceEEECCCCCH------HHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCch
Confidence            57888999874      3355666789999999997531    1222345678999999999999874 56789999987


Q ss_pred             Cccceeee----EeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446          92 VPHFLEKI----SAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus        92 ~~~~~~~~----~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      .+|+....    .++.++...+..+.+.|...|.+.+.  +++..+ ..++.+...+|+.|+||+.
T Consensus       139 ~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~--~~~~~~-~~~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        139 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEE--LCKHYT-KDFGIECRIGRFHNIYGPF  201 (370)
T ss_pred             hhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHH--HHHHHH-HHhCCCEEEEEECCccCCC
Confidence            66643221    12222211133334445444443211  111111 1234455566777777763

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.72  E-value=5.3e-08  Score=74.28  Aligned_cols=76  Identities=14%  Similarity=0.135  Sum_probs=55.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhc--cchhhc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQ--LKLFLR   87 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~--~~~~~~   87 (166)
                      +++++.||++++      +.+.++.+  ++|+|||+||.......   ......+|+.||.++++.|++..-  ..+|++
T Consensus        56 ~~~~~~~Dl~d~------~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~  129 (343)
T TIGR01472        56 RMKLHYGDLTDS------SNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQ  129 (343)
T ss_pred             ceeEEEeccCCH------HHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEE
Confidence            589999999985      33566655  47999999998654322   234567899999999999987421  236889


Q ss_pred             ccccCccce
Q psy3446          88 LKTEVPHFL   96 (166)
Q Consensus        88 ~ss~~~~~~   96 (166)
                      +||..+++.
T Consensus       130 ~SS~~vyg~  138 (343)
T TIGR01472       130 ASTSELYGK  138 (343)
T ss_pred             eccHHhhCC
Confidence            999877654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.70  E-value=4.5e-09  Score=80.33  Aligned_cols=76  Identities=18%  Similarity=0.206  Sum_probs=56.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHH--------h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI--------R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~--------~   80 (166)
                      .+++++.+|++++      +.+..+++  ++|+|||+||......   .....+++|+.|+.++++.|++.        .
T Consensus        50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~  123 (352)
T PRK10084         50 ERYVFEHADICDR------AELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKK  123 (352)
T ss_pred             CceEEEEecCCCH------HHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccc
Confidence            3578899999985      33555554  4899999999865422   23568899999999999999863        1


Q ss_pred             ccchhhcccccCccc
Q psy3446          81 QLKLFLRLKTEVPHF   95 (166)
Q Consensus        81 ~~~~~~~~ss~~~~~   95 (166)
                      ...+++++||...++
T Consensus       124 ~~~~~i~~SS~~vyg  138 (352)
T PRK10084        124 NAFRFHHISTDEVYG  138 (352)
T ss_pred             cceeEEEecchhhcC
Confidence            245788888876654

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.67  E-value=3.4e-09  Score=83.51  Aligned_cols=70  Identities=24%  Similarity=0.183  Sum_probs=53.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|+.++.           ..++|+|||+||....   ..+....+++|+.|+.++++.|++. +. +++++||
T Consensus       167 ~~~~~i~~D~~~~~-----------l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS  233 (442)
T PLN02206        167 PNFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTST  233 (442)
T ss_pred             CceEEEECCccChh-----------hcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECC
Confidence            36788999987652           2468999999997542   2234567889999999999999885 33 6889999


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       234 ~~VYg~  239 (442)
T PLN02206        234 SEVYGD  239 (442)
T ss_pred             hHHhCC
Confidence            877653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.65  E-value=3.4e-09  Score=79.31  Aligned_cols=71  Identities=15%  Similarity=-0.025  Sum_probs=52.0

Q ss_pred             EecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          19 VAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..+|++++      +.+..+.+  ++|+|||+||..+.    ..+....++.|+.|+.++++.|++. +.++++++||..
T Consensus        31 ~~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~  103 (306)
T PLN02725         31 KELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSC  103 (306)
T ss_pred             ccCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCcee
Confidence            46777764      34555544  57999999998542    1233557889999999999999874 566789999987


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       104 vyg~  107 (306)
T PLN02725        104 IYPK  107 (306)
T ss_pred             ecCC
Confidence            7653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.61  E-value=1.7e-08  Score=75.68  Aligned_cols=102  Identities=20%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+.++.++  +|+|||+||......   .....+.+|+.|+.++++.+.+.....+++++|
T Consensus        51 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S  124 (317)
T TIGR01181        51 RYRFVKGDIGDR------ELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS  124 (317)
T ss_pred             CcEEEEcCCcCH------HHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            688999999985      346666665  899999999865433   335578899999999999988743233688888


Q ss_pred             ccCccceeee-EeecCCC-CC--CCCCCCHHhHHHHh
Q psy3446          90 TEVPHFLEKI-SAVAGDV-SL--PGLGLSETDRELLR  122 (166)
Q Consensus        90 s~~~~~~~~~-~~v~gD~-~~--~~~gls~~~~~~l~  122 (166)
                      |..+++.... .+..++. ..  ..||.++...+.++
T Consensus       125 s~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~  161 (317)
T TIGR01181       125 TDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLV  161 (317)
T ss_pred             ccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHH
Confidence            8766542211 1222221 11  23666666666654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1502|consensus

Probab=98.58  E-value=1e-07  Score=71.32  Aligned_cols=74  Identities=19%  Similarity=0.276  Sum_probs=62.1

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhh--HHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEK--IQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~--~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .++++++.+||++++      .+....+++|.|||+|+.+.+...  ..+.+...+.||.++++.|++...++++++.||
T Consensus        56 ~~~l~l~~aDL~d~~------sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS  129 (327)
T KOG1502|consen   56 KERLKLFKADLLDEG------SFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSS  129 (327)
T ss_pred             cccceEEeccccccc------hHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEecc
Confidence            346999999999975      378889999999999999987544  346888999999999999998665788888887


Q ss_pred             cC
Q psy3446          91 EV   92 (166)
Q Consensus        91 ~~   92 (166)
                      ..
T Consensus       130 ~a  131 (327)
T KOG1502|consen  130 TA  131 (327)
T ss_pred             HH
Confidence            64

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.57  E-value=8.8e-08  Score=70.93  Aligned_cols=69  Identities=29%  Similarity=0.375  Sum_probs=48.4

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      +.++.||++|+      +.+..+++  ++|+|||+||.-++   ..++.+++++|+.||+++++.|.+ .+++.|+.+||
T Consensus        56 ~~~vigDvrd~------~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~-~~v~~~v~IST  128 (293)
T PF02719_consen   56 IVPVIGDVRDK------ERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIE-HGVERFVFIST  128 (293)
T ss_dssp             EE--CTSCCHH------HHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHH-TT-SEEEEEEE
T ss_pred             cCceeecccCH------HHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccc
Confidence            45679999995      34677777  89999999998543   345577899999999999999998 46788999998


Q ss_pred             c
Q psy3446          91 E   91 (166)
Q Consensus        91 ~   91 (166)
                      -
T Consensus       129 D  129 (293)
T PF02719_consen  129 D  129 (293)
T ss_dssp             C
T ss_pred             c
Confidence            5

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.57  E-value=4.8e-08  Score=86.50  Aligned_cols=66  Identities=32%  Similarity=0.398  Sum_probs=61.0

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++.+|++...++.+..++|+|||+|+.+++..++..++..|+.|+.+++++|.+.
T Consensus      1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~ 1099 (1389)
T TIGR03443      1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG 1099 (1389)
T ss_pred             cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC
Confidence            367889999999999999999999999999999999999988899999899999999999999875

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1429|consensus

Probab=98.55  E-value=1.4e-09  Score=79.10  Aligned_cols=124  Identities=22%  Similarity=0.154  Sum_probs=81.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeec---chhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~---~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++.+..|+..|           ++..+|.|||+||..+   +..+....+.+|+.|+.+++-+|++..  ++|.+.||
T Consensus        75 ~~fel~~hdv~~p-----------l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aST  141 (350)
T KOG1429|consen   75 PNFELIRHDVVEP-----------LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAST  141 (350)
T ss_pred             cceeEEEeechhH-----------HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeec
Confidence            4677777887664           4567899999999864   333335577899999999999999843  67888999


Q ss_pred             cCccceeeeEeecCCCCC---CCCCCCHHhHHHHhc-cccEEEEccccccchHHHHHHHHHHHHHHHH
Q psy3446          91 EVPHFLEKISAVAGDVSL---PGLGLSETDRELLRT-NVNVIFHGAATVRFDEKIQLAVAINVLGVRA  154 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~~---~~~gls~~~~~~l~~-~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~  154 (166)
                      +-+|+.+..+|-.++.-.   |.-..+.|+..|.+. ..-.    |..-.++....+.|.+|+||++.
T Consensus       142 seVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~----~y~k~~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  142 SEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCY----AYHKQEGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             ccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHH----HhhcccCcEEEEEeeecccCCcc
Confidence            988887776665544311   222223333333221 1111    22224566677789999999973

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.53  E-value=3.4e-08  Score=75.50  Aligned_cols=102  Identities=19%  Similarity=0.158  Sum_probs=65.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+..+.+  ++|+|||+||......   .....+++|+.|+.++++.++.....++++++|
T Consensus        53 ~~~~~~~Dl~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~S  126 (349)
T TIGR02622        53 KIEDHFGDIRDA------AKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVT  126 (349)
T ss_pred             CceEEEccCCCH------HHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            577899999985      34555555  4799999999654322   234578899999999999987643256788888


Q ss_pred             ccCccceee-eEeecCCCC---CCCCCCCHHhHHHHh
Q psy3446          90 TEVPHFLEK-ISAVAGDVS---LPGLGLSETDRELLR  122 (166)
Q Consensus        90 s~~~~~~~~-~~~v~gD~~---~~~~gls~~~~~~l~  122 (166)
                      |...++... ..++.++..   ...|+.++...+.++
T Consensus       127 S~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~  163 (349)
T TIGR02622       127 SDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVI  163 (349)
T ss_pred             chhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHH
Confidence            876654321 112222211   123556666555544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.53  E-value=2.4e-07  Score=68.31  Aligned_cols=106  Identities=21%  Similarity=0.181  Sum_probs=73.7

Q ss_pred             cCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccc
Q psy3446          21 GDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHF   95 (166)
Q Consensus        21 gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~   95 (166)
                      .|+++++      ...++..  ++|+|||+||.+.+...   .+.++.+|..|+.++.++|++..  ..++|+||.|+..
T Consensus        34 ~Ditd~~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFD  105 (281)
T COG1091          34 LDITDPD------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFD  105 (281)
T ss_pred             ccccChH------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEec
Confidence            4777753      2455544  58999999999877553   35689999999999999999843  5689999999854


Q ss_pred             eeeeE-eecCCCCCC--CCCCCHHhHHHHhccc---cEEEEcccc
Q psy3446          96 LEKIS-AVAGDVSLP--GLGLSETDRELLRTNV---NVIFHGAAT  134 (166)
Q Consensus        96 ~~~~~-~v~gD~~~~--~~gls~~~~~~l~~~~---d~i~h~aa~  134 (166)
                      ..+-. ..+.|...|  .||.||...|......   .+|+..++.
T Consensus       106 G~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv  150 (281)
T COG1091         106 GEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWV  150 (281)
T ss_pred             CCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCEEEEEeeee
Confidence            44433 344566555  3788888877765322   455555543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.49  E-value=4.8e-07  Score=68.93  Aligned_cols=102  Identities=10%  Similarity=0.023  Sum_probs=64.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhcc----ch
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQL----KL   84 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~----~~   84 (166)
                      .+++++.+|++++      +.+..+.+  ++|+|||+||......   .....+++|+.|+.++++.++.....    ..
T Consensus        60 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~  133 (340)
T PLN02653         60 ARMKLHYGDLSDA------SSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIK  133 (340)
T ss_pred             CceEEEEecCCCH------HHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhcccccccee
Confidence            3588999999985      33555555  4799999999865432   22445789999999999999875321    26


Q ss_pred             hhcccccCccceeeeEeecCCCC-C--CCCCCCHHhHHHHh
Q psy3446          85 FLRLKTEVPHFLEKISAVAGDVS-L--PGLGLSETDRELLR  122 (166)
Q Consensus        85 ~~~~ss~~~~~~~~~~~v~gD~~-~--~~~gls~~~~~~l~  122 (166)
                      |+++||..+++.... ++.++.. .  ..|+.++...++++
T Consensus       134 ~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~  173 (340)
T PLN02653        134 YYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAAHWYT  173 (340)
T ss_pred             EEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHHH
Confidence            778888766653322 3333321 1  12455555555543

>PLN02686 cinnamoyl-CoA reductase

Probab=98.48  E-value=2.1e-08  Score=77.32  Aligned_cols=71  Identities=11%  Similarity=0.080  Sum_probs=54.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      +++++.+|++++.      .+..+.+++|.|||+|+......   ......++|+.|+.++++.|++...+++++++||.
T Consensus       108 ~~~~v~~Dl~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~  181 (367)
T PLN02686        108 GIWTVMANLTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSL  181 (367)
T ss_pred             ceEEEEcCCCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccH
Confidence            5889999999853      46667788999999999865432   11345678999999999999874356788888885

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.47  E-value=2.1e-07  Score=68.07  Aligned_cols=101  Identities=15%  Similarity=0.129  Sum_probs=73.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhHH---HHHHhhhhcHHHHHHHHHHHhc-cchhhc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKIQ---LAVAINVLGVRAMLELAREIRQ-LKLFLR   87 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~~---~~~~~nv~gt~~ll~l~~~~~~-~~~~~~   87 (166)
                      .++.++.|||+|..      .+.++.+  ++|-|+|+||..+++.+.+   ...+++..||.++|+..|.... ..+|-+
T Consensus        55 ~~l~l~~gDLtD~~------~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQ  128 (345)
T COG1089          55 PRLHLHYGDLTDSS------NLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQ  128 (345)
T ss_pred             ceeEEEeccccchH------HHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEe
Confidence            46899999999953      2444444  5799999999987666653   3567889999999999998643 456767


Q ss_pred             ccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          88 LKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        88 ~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .||+--++...  .++-+-..|.++.|+|+..|+-
T Consensus       129 AStSE~fG~v~--~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089         129 ASTSELYGLVQ--EIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             cccHHhhcCcc--cCccccCCCCCCCCHHHHHHHH
Confidence            77765454333  2334444688999999999985

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.46  E-value=3.1e-08  Score=75.23  Aligned_cols=101  Identities=15%  Similarity=0.036  Sum_probs=65.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      ++.++.+|++++.      .+..++.  ++|+|||+|+......   .....+.+|+.++.++++.+++. +.+.++++|
T Consensus        51 ~~~~~~~Dl~d~~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S  123 (338)
T PRK10675         51 HPTFVEGDIRNEA------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSS  123 (338)
T ss_pred             CceEEEccCCCHH------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            4678999999853      3455444  5899999999765432   23457889999999999998874 456788888


Q ss_pred             ccCccceeeeEeecCCCC----CCCCCCCHHhHHHHh
Q psy3446          90 TEVPHFLEKISAVAGDVS----LPGLGLSETDRELLR  122 (166)
Q Consensus        90 s~~~~~~~~~~~v~gD~~----~~~~gls~~~~~~l~  122 (166)
                      |...++.....++.++..    ...|+.++...++++
T Consensus       124 s~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675        124 SATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             cHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            876654322223333321    123455566555554

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.42  E-value=5.2e-07  Score=71.64  Aligned_cols=71  Identities=28%  Similarity=0.345  Sum_probs=59.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .++.++-||++|.+      .+..+.++  +|+|||.||.-++   ..++.+..++|+.||.++++.|.+ .+++.|+.+
T Consensus       302 ~~~~~~igdVrD~~------~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~-~~V~~~V~i  374 (588)
T COG1086         302 LKLRFYIGDVRDRD------RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIK-NGVKKFVLI  374 (588)
T ss_pred             cceEEEecccccHH------HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHH-hCCCEEEEE
Confidence            57899999999953      46777777  9999999998553   445678999999999999999998 578889999


Q ss_pred             ccc
Q psy3446          89 KTE   91 (166)
Q Consensus        89 ss~   91 (166)
                      ||-
T Consensus       375 STD  377 (588)
T COG1086         375 STD  377 (588)
T ss_pred             ecC
Confidence            984

>KOG1430|consensus

Probab=98.42  E-value=3.5e-07  Score=69.65  Aligned_cols=105  Identities=21%  Similarity=0.202  Sum_probs=73.4

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeec--chh-hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR--FDE-KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~--~~~-~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      ..+++++.||+.+..      .+.....++ .|+|+||...  +.. +.+..+++|+.||.++++.|.+ .+++++++.|
T Consensus        54 ~~~v~~~~~D~~~~~------~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~-~~v~~lIYtS  125 (361)
T KOG1430|consen   54 SGRVTVILGDLLDAN------SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKE-LGVKRLIYTS  125 (361)
T ss_pred             CCceeEEecchhhhh------hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHH-hCCCEEEEec
Confidence            457999999999864      366777888 8888888753  333 3566889999999999999998 5788999999


Q ss_pred             ccCccceee-eEeecCCCCC-----CCCCCCHHhHHHHhccc
Q psy3446          90 TEVPHFLEK-ISAVAGDVSL-----PGLGLSETDRELLRTNV  125 (166)
Q Consensus        90 s~~~~~~~~-~~~v~gD~~~-----~~~gls~~~~~~l~~~~  125 (166)
                      |.++..... +....++...     ..|+-++...|++..++
T Consensus       126 s~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~a  167 (361)
T KOG1430|consen  126 SAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEA  167 (361)
T ss_pred             CceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHh
Confidence            988742221 2222233222     24666777777776443

>PLN02240 UDP-glucose 4-epimerase

Probab=98.41  E-value=1.4e-06  Score=66.48  Aligned_cols=102  Identities=15%  Similarity=0.053  Sum_probs=66.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..+..  ++|.|||+||......   .....+.+|+.++.++++.+++. +.+.++++
T Consensus        58 ~~~~~~~~D~~~~------~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~  130 (352)
T PLN02240         58 DNLVFHKVDLRDK------EALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFS  130 (352)
T ss_pred             ccceEEecCcCCH------HHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            3688999999885      33555544  6899999999754322   33457899999999999998873 45678888


Q ss_pred             cccCccceeeeEeecCCCCC---CCCCCCHHhHHHHh
Q psy3446          89 KTEVPHFLEKISAVAGDVSL---PGLGLSETDRELLR  122 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD~~~---~~~gls~~~~~~l~  122 (166)
                      ||...++...-.++.+|...   ..|+.++...++++
T Consensus       131 Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~  167 (352)
T PLN02240        131 SSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEIC  167 (352)
T ss_pred             ccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            88765543222234444211   12455555555544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.41  E-value=7.6e-08  Score=72.57  Aligned_cols=74  Identities=23%  Similarity=0.240  Sum_probs=58.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      +++++.+|++++      +.+.++.+++|+|||+|+.... .......+++|+.|+.++++.+++. ..++++++||..+
T Consensus        44 ~~~~~~~D~~~~------~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~  116 (328)
T TIGR03466        44 DVEIVEGDLRDP------ASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVAT  116 (328)
T ss_pred             CceEEEeeCCCH------HHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhh
Confidence            688999999885      3467777899999999987542 2344567889999999999998874 4567888888766


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      ++
T Consensus       117 ~~  118 (328)
T TIGR03466       117 LG  118 (328)
T ss_pred             cC
Confidence            54

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.40  E-value=1.2e-06  Score=65.12  Aligned_cols=56  Identities=32%  Similarity=0.341  Sum_probs=46.9

Q ss_pred             eecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         101 AVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       101 ~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.+|+.      ++..+.+.++++|+|||+|+.+...  .+.+.++.+||.||+++++.|++.
T Consensus        49 ~~~~Di~------d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~  106 (280)
T PF01073_consen   49 YIQGDIT------DPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA  106 (280)
T ss_pred             EEEeccc------cHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc
Confidence            6788874      3466888899999999999987654  367779999999999999999875

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.39  E-value=1.1e-06  Score=67.12  Aligned_cols=66  Identities=44%  Similarity=0.552  Sum_probs=60.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++.+|++...+..+..++|+|||+|+.+++..++..++..|+.|+.+++++|.+.
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~  126 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG  126 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC
Confidence            477889999999999999988999989999999999998888889999999999999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.37  E-value=9.1e-07  Score=63.58  Aligned_cols=84  Identities=27%  Similarity=0.276  Sum_probs=61.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+.++.++  +|+|||+||.....   ......++.|+.++.++++.+++. +..+++++|
T Consensus        43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~s  115 (236)
T PF01370_consen   43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLS  115 (236)
T ss_dssp             TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred             eEEEEEeecccc------ccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            789999999974      456666665  59999999986421   233567889999999999999985 447889999


Q ss_pred             ccCccceeeeEeecCC
Q psy3446          90 TEVPHFLEKISAVAGD  105 (166)
Q Consensus        90 s~~~~~~~~~~~v~gD  105 (166)
                      |...++.....++.++
T Consensus       116 S~~~y~~~~~~~~~e~  131 (236)
T PF01370_consen  116 SASVYGDPDGEPIDED  131 (236)
T ss_dssp             EGGGGTSSSSSSBETT
T ss_pred             cccccccccccccccc
Confidence            9777654433333343

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.30  E-value=2.1e-07  Score=69.05  Aligned_cols=96  Identities=19%  Similarity=0.091  Sum_probs=59.8

Q ss_pred             ecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          20 AGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        20 ~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      .+|+.++      +.+..+.++  +|+|||+|+......   .....+++|+.|+.++++.+++.. . +++++||..++
T Consensus        33 ~~d~~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy  104 (287)
T TIGR01214        33 QLDLTDP------EALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVF  104 (287)
T ss_pred             ccCCCCH------HHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeee
Confidence            3566653      445665664  599999999765432   334567899999999999988743 3 68888987765


Q ss_pred             ceeeeEeecCCCC-C--CCCCCCHHhHHHHhc
Q psy3446          95 FLEKISAVAGDVS-L--PGLGLSETDRELLRT  123 (166)
Q Consensus        95 ~~~~~~~v~gD~~-~--~~~gls~~~~~~l~~  123 (166)
                      ......++.++.. .  ..|+.++...|+++.
T Consensus       105 ~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~  136 (287)
T TIGR01214       105 DGEGKRPYREDDATNPLNVYGQSKLAGEQAIR  136 (287)
T ss_pred             cCCCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Confidence            4322223333311 1  234555666665543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.28  E-value=7.6e-08  Score=72.26  Aligned_cols=54  Identities=17%  Similarity=0.114  Sum_probs=41.2

Q ss_pred             CccEEEEcceeecch-hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccce
Q psy3446          41 NVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFL   96 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~-~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~   96 (166)
                      ++|+|||+||..... ......++.|+.|+.++++.|++. +. ++++.||..+++.
T Consensus        68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~  122 (308)
T PRK11150         68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG  122 (308)
T ss_pred             CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence            689999999964422 122346889999999999999884 44 5899999877654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.25  E-value=2.1e-06  Score=64.08  Aligned_cols=99  Identities=20%  Similarity=0.141  Sum_probs=53.8

Q ss_pred             HhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecC-CC
Q psy3446          33 TDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAG-DV  106 (166)
Q Consensus        33 ~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~g-D~  106 (166)
                      +.+..+..  ++|+||||||..+...   +.+.++.+|+.++.++.+.|.+.  ..+++++||.+++...+-.|..+ |.
T Consensus        41 ~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~STd~VFdG~~~~~y~E~d~  118 (286)
T PF04321_consen   41 EAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER--GARLIHISTDYVFDGDKGGPYTEDDP  118 (286)
T ss_dssp             HHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEEEGGGS-SSTSSSB-TTS-
T ss_pred             HHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEeeccEEEcCCcccccccCCC
Confidence            44555544  5899999999876543   45678999999999999999873  34788999998864333333333 33


Q ss_pred             CCC--CCCCCHHhHHHHhcc---ccEEEEccc
Q psy3446         107 SLP--GLGLSETDRELLRTN---VNVIFHGAA  133 (166)
Q Consensus       107 ~~~--~~gls~~~~~~l~~~---~d~i~h~aa  133 (166)
                      ..|  .||.++...|+....   --+|+..+.
T Consensus       119 ~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~  150 (286)
T PF04321_consen  119 PNPLNVYGRSKLEGEQAVRAACPNALILRTSW  150 (286)
T ss_dssp             ---SSHHHHHHHHHHHHHHHH-SSEEEEEE-S
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcCCEEEEecce
Confidence            333  245555555654432   224555444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.23  E-value=2e-07  Score=70.08  Aligned_cols=101  Identities=17%  Similarity=0.136  Sum_probs=64.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++.      .+..+..  ++|+|||+|+......   .....+.+|+.|+.++++.+.+. +...++++|
T Consensus        48 ~~~~~~~D~~~~~------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~s  120 (328)
T TIGR01179        48 RVTFVEGDLRDRE------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSS  120 (328)
T ss_pred             ceEEEECCCCCHH------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEec
Confidence            4778899999853      3555544  6999999999764432   22456789999999999988863 445677888


Q ss_pred             ccCccceeeeEeecCCCC---CCCCCCCHHhHHHHh
Q psy3446          90 TEVPHFLEKISAVAGDVS---LPGLGLSETDRELLR  122 (166)
Q Consensus        90 s~~~~~~~~~~~v~gD~~---~~~~gls~~~~~~l~  122 (166)
                      +...++.....++.++..   ...|+.++...++++
T Consensus       121 s~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179       121 SAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL  156 (328)
T ss_pred             chhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence            866554332223333311   123555555555443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.19  E-value=6.4e-06  Score=62.52  Aligned_cols=71  Identities=18%  Similarity=0.178  Sum_probs=55.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..+..++|+|||+||.....   .+....+++|+.|+.++++.+++. +...++++||
T Consensus        53 ~~~~~v~~Dl~d~------~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS  125 (324)
T TIGR03589        53 PCLRFFIGDVRDK------ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALST  125 (324)
T ss_pred             CcEEEEEccCCCH------HHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence            3688999999985      44667778899999999975432   233467899999999999999873 4557888887


Q ss_pred             c
Q psy3446          91 E   91 (166)
Q Consensus        91 ~   91 (166)
                      .
T Consensus       126 ~  126 (324)
T TIGR03589       126 D  126 (324)
T ss_pred             C
Confidence            4

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.12  E-value=9.2e-06  Score=60.95  Aligned_cols=71  Identities=14%  Similarity=0.134  Sum_probs=50.8

Q ss_pred             EEecCCCCCCCCCCHHhHHHHh----cCccEEEEcceeecch-hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          18 AVAGDVSLPGLGLSETDRELLR----TNVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~----~~~d~Vih~aa~~~~~-~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+.+|++++.+      .+.+.    .++|+|||+||..... .+....+.+|+.|+.++++.|++. +. +++++||..
T Consensus        45 ~~~~d~~~~~~------~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~  116 (314)
T TIGR02197        45 VIADYIDKEDF------LDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAA  116 (314)
T ss_pred             eeeccCcchhH------HHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHH
Confidence            45677766432      44443    4799999999975432 234557889999999999999874 33 688999987


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       117 vy~~  120 (314)
T TIGR02197       117 TYGD  120 (314)
T ss_pred             hcCC
Confidence            7653

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.08  E-value=8.3e-06  Score=60.35  Aligned_cols=89  Identities=17%  Similarity=0.150  Sum_probs=63.7

Q ss_pred             cHHHHHHHHHHHhccchhhcccccCccceee--eEeecCCCCCCCCCCCHHhHHHHh--ccccEEEEccccccchHH---
Q psy3446          68 GVRAMLELAREIRQLKLFLRLKTEVPHFLEK--ISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRFDEK---  140 (166)
Q Consensus        68 gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~--~~~v~gD~~~~~~gls~~~~~~l~--~~~d~i~h~aa~~~~~~~---  140 (166)
                      |+..+.++...+..+..++.+|+.......+  ..++.||+.+      ....+++.  ..+|.|||+||....+.+   
T Consensus        13 GSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D------~~~L~~vf~~~~idaViHFAa~~~VgESv~~   86 (329)
T COG1087          13 GSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD------RALLTAVFEENKIDAVVHFAASISVGESVQN   86 (329)
T ss_pred             HHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc------HHHHHHHHHhcCCCEEEECccccccchhhhC
Confidence            4444555666656677888998876654444  4678899733      33345544  368999999998776665   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Q psy3446         141 IQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       141 ~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +..++.-||.||.+||+.+++.
T Consensus        87 Pl~Yy~NNv~gTl~Ll~am~~~  108 (329)
T COG1087          87 PLKYYDNNVVGTLNLIEAMLQT  108 (329)
T ss_pred             HHHHHhhchHhHHHHHHHHHHh
Confidence            4458888999999999999886

>PRK05865 hypothetical protein; Provisional

Probab=97.99  E-value=2.2e-06  Score=72.14  Aligned_cols=64  Identities=20%  Similarity=0.115  Sum_probs=50.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      +++++.+|++++      +.+..+.+++|+|||+||....      ..++|+.|+.++++.+++. +.++++++||.
T Consensus        41 ~v~~v~gDL~D~------~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~  104 (854)
T PRK05865         41 SADFIAADIRDA------TAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSG  104 (854)
T ss_pred             CceEEEeeCCCH------HHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCc
Confidence            588999999985      3466777889999999986432      4578999999999999874 45678888875

>PLN02778 3,5-epimerase/4-reductase

Probab=97.98  E-value=4.2e-05  Score=57.44  Aligned_cols=69  Identities=17%  Similarity=0.174  Sum_probs=45.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecc------hhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF------DEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~------~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      ++....+|+++..      .+.....  ++|+|||+||....      ..+....+++|+.|+.++++.|++. +.+. .
T Consensus        35 ~V~~~~~~~~~~~------~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~~-v  106 (298)
T PLN02778         35 DFHYGSGRLENRA------SLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLVL-T  106 (298)
T ss_pred             EEEEecCccCCHH------HHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCE-E
Confidence            3555566776532      2332223  68999999998642      1344567899999999999999985 4443 3


Q ss_pred             ccccc
Q psy3446          87 RLKTE   91 (166)
Q Consensus        87 ~~ss~   91 (166)
                      +.||.
T Consensus       107 ~~sS~  111 (298)
T PLN02778        107 NYATG  111 (298)
T ss_pred             EEecc
Confidence            44443

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.96  E-value=2.5e-05  Score=64.53  Aligned_cols=114  Identities=25%  Similarity=0.279  Sum_probs=74.6

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      .|+-+||++++|.++...+..+-.|. .+..+.|... ...........  ...++.++.+|+.++..+++....+.+ .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~-~V~~l~R~~~-~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREA-TVHVLVRRQS-LSRLEALAAYW--GADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCC-EEEEEECcch-HHHHHHHHHhc--CCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            37889999999988755443211111 0111111000 00000000000  114577889999888888888888887 8


Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|+|||+|+..++..+....+.+|+.|+.+++++|.+.
T Consensus        77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~  115 (657)
T PRK07201         77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL  115 (657)
T ss_pred             CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc
Confidence            899999999988777777788999999999999999886

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=97.94  E-value=6.7e-05  Score=57.48  Aligned_cols=112  Identities=14%  Similarity=0.076  Sum_probs=64.2

Q ss_pred             ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhc-cchhhcc-cccCccceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          42 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQ-LKLFLRL-KTEVPHFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~-~~~~~~~-ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      ..-|+-+||+++.|.++-..+...  |. .+..+.+.... ....... .........++.++.+|+.+      ....+
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~--g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d------~~~l~   85 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFL--NQ-TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK------FTDCQ   85 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CC-EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC------HHHHH
Confidence            356999999999999885543321  10 00000000000 0000000 00000011345677888743      34567


Q ss_pred             HHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.+++|+|||+||.....   ........+|+.||.+++++|++.
T Consensus        86 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~  131 (348)
T PRK15181         86 KACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA  131 (348)
T ss_pred             HHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            7778899999999964322   334557889999999999999876

>PLN02583 cinnamoyl-CoA reductase

Probab=97.93  E-value=4.3e-05  Score=57.30  Aligned_cols=73  Identities=10%  Similarity=-0.042  Sum_probs=54.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++.      .+..++.++|.|+|+++.... .......+++|+.|+.++++.+.+....++++++||..
T Consensus        57 ~~~~~~~~Dl~d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~  130 (297)
T PLN02583         57 ERLKVFDVDPLDYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT  130 (297)
T ss_pred             CceEEEEecCCCHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence            36889999999853      356777889999998765432 22245678999999999999988743456788888864

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.86  E-value=3.1e-05  Score=58.56  Aligned_cols=69  Identities=23%  Similarity=0.235  Sum_probs=53.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .+++++.||++++      +.+..+++++|+|||+++...  .......++|+.|+.++++.|++ .++++|+++|+.
T Consensus        43 ~~v~~v~~Dl~d~------~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~-~gvkr~I~~Ss~  111 (317)
T CHL00194         43 WGAELVYGDLSLP------ETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKA-AKIKRFIFFSIL  111 (317)
T ss_pred             cCCEEEECCCCCH------HHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHH-cCCCEEEEeccc
Confidence            3689999999985      346777889999999976432  22234667899999999999988 456788888874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.82  E-value=8.3e-05  Score=61.81  Aligned_cols=100  Identities=13%  Similarity=0.040  Sum_probs=61.9

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeec---ch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVR---FD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~---~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      +.+..+|++++.      .+.....  ++|+||||||.+.   ..   .+....+++|+.|+.++++.|++. +.+ +++
T Consensus       407 v~~~~~~l~d~~------~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~  478 (668)
T PLN02260        407 YEYGKGRLEDRS------SLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMN  478 (668)
T ss_pred             EEeeccccccHH------HHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEE
Confidence            445667887742      2344433  6899999999864   22   244567899999999999999984 444 445


Q ss_pred             ccccCccce------eeeEeecCC-CCC---CCCCCCHHhHHHHhc
Q psy3446          88 LKTEVPHFL------EKISAVAGD-VSL---PGLGLSETDRELLRT  123 (166)
Q Consensus        88 ~ss~~~~~~------~~~~~v~gD-~~~---~~~gls~~~~~~l~~  123 (166)
                      +||.+++..      ....++.++ ...   ..||.+|...|+++.
T Consensus       479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~  524 (668)
T PLN02260        479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLR  524 (668)
T ss_pred             EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHH
Confidence            666554321      111233332 222   236777877777664

>KOG1502|consensus

Probab=97.66  E-value=5.2e-05  Score=57.08  Aligned_cols=110  Identities=17%  Similarity=0.134  Sum_probs=71.1

Q ss_pred             ccEEEEcceeecchhhHHHHHHh---hhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhH
Q psy3446          42 VNVIFHGAATVRFDEKIQLAVAI---NVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDR  118 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~~~~~---nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~  118 (166)
                      -..|+-+||.++.+..+...+..   -|.||.      |.....+...++...- ...++...+.+|+.++      ..+
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtV------R~~~~~k~~~~L~~l~-~a~~~l~l~~aDL~d~------~sf   72 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTV------RDPEDEKKTEHLRKLE-GAKERLKLFKADLLDE------GSF   72 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEE------cCcchhhhHHHHHhcc-cCcccceEEecccccc------chH
Confidence            35789999999888776432221   122221      1111111111222111 2234567788897544      458


Q ss_pred             HHHhccccEEEEccccccchHH--HHHHHHHHHHHHHHHHHHHHHhhc
Q psy3446         119 ELLRTNVNVIFHGAATVRFDEK--IQLAVAINVLGVRAMLELAREIRQ  164 (166)
Q Consensus       119 ~~l~~~~d~i~h~aa~~~~~~~--~~~~~~~Nv~G~~~~l~~a~~~~~  164 (166)
                      .+.++++|.|||.|+.+.|...  ..++....|.||.++|+.|++.+.
T Consensus        73 ~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~s  120 (327)
T KOG1502|consen   73 DKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKS  120 (327)
T ss_pred             HHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCC
Confidence            8889999999999999887544  446888899999999999999863

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.60  E-value=0.00029  Score=52.75  Aligned_cols=98  Identities=18%  Similarity=0.162  Sum_probs=58.3

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhcc
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTN  124 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~~  124 (166)
                      |+-+||++++|.++...+             ..++..+..+.+...........+..+.+|+...      ....+.+.+
T Consensus         3 ILVtG~tGfiG~~l~~~L-------------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~   63 (314)
T COG0451           3 ILVTGGAGFIGSHLVERL-------------LAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDR------DLVDELAKG   63 (314)
T ss_pred             EEEEcCcccHHHHHHHHH-------------HhCCCeEEEEeCCCccccccccccceeeecccch------HHHHHHHhc
Confidence            777888887776553322             2212233333322221111112344555664333      335556666


Q ss_pred             c-cEEEEccccccchHH----HHHHHHHHHHHHHHHHHHHHH
Q psy3446         125 V-NVIFHGAATVRFDEK----IQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       125 ~-d~i~h~aa~~~~~~~----~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      . |.|+|+|+.......    ...++..|+.|+.+++++|++
T Consensus        64 ~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~  105 (314)
T COG0451          64 VPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA  105 (314)
T ss_pred             CCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence            6 999999998764443    235899999999999999997

>PLN02427 UDP-apiose/xylose synthase

Probab=97.54  E-value=0.00042  Score=53.84  Aligned_cols=108  Identities=11%  Similarity=0.001  Sum_probs=61.6

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc-CccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE-VPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~-~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .|+-+||++++|.++...+..+ .|. .+..+.+....   ...+... ......++.++.+|+.+      ...+++++
T Consensus        16 ~VlVTGgtGfIGs~lv~~L~~~-~g~-~V~~l~r~~~~---~~~l~~~~~~~~~~~~~~~~~Dl~d------~~~l~~~~   84 (386)
T PLN02427         16 TICMIGAGGFIGSHLCEKLMTE-TPH-KVLALDVYNDK---IKHLLEPDTVPWSGRIQFHRINIKH------DSRLEGLI   84 (386)
T ss_pred             EEEEECCcchHHHHHHHHHHhc-CCC-EEEEEecCchh---hhhhhccccccCCCCeEEEEcCCCC------hHHHHHHh
Confidence            5899999999999885543321 010 11111110000   0000000 00011346677788743      34567777


Q ss_pred             ccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 TNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++|+|||+|+....   ..........|+.|+.+++++|++.
T Consensus        85 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~  127 (386)
T PLN02427         85 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN  127 (386)
T ss_pred             hcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc
Confidence            889999999986432   2223344567999999999999765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.53  E-value=0.00029  Score=56.46  Aligned_cols=61  Identities=28%  Similarity=0.320  Sum_probs=47.1

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEcccccc---chHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~---~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++.++-||+.      +....+++.++  +|+|||.||.-+   ....+.+..++||.||.|+++.|.+++
T Consensus       302 ~~~~~~igdVr------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~  367 (588)
T COG1086         302 LKLRFYIGDVR------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG  367 (588)
T ss_pred             cceEEEecccc------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC
Confidence            56677888873      34557777777  999999999633   233567789999999999999998863

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.53  E-value=0.00031  Score=56.99  Aligned_cols=73  Identities=15%  Similarity=0.186  Sum_probs=55.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.||+++.      +++...+.++|+|||+++..... ..+...+.+|+.|+.++++.++.. +..+|+++|+..
T Consensus       138 ~~v~iV~gDLtD~------esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSig  210 (576)
T PLN03209        138 EKLEIVECDLEKP------DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLG  210 (576)
T ss_pred             CceEEEEecCCCH------HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccch
Confidence            3588999999884      34666778999999999865321 123445788999999999998874 556788888865


Q ss_pred             c
Q psy3446          93 P   93 (166)
Q Consensus        93 ~   93 (166)
                      .
T Consensus       211 a  211 (576)
T PLN03209        211 T  211 (576)
T ss_pred             h
Confidence            4

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.45  E-value=0.00022  Score=55.58  Aligned_cols=71  Identities=20%  Similarity=0.176  Sum_probs=52.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc----CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~----~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++++.      .+..+.+    ++|+||||++.....  ....+++|+.++.++++.+++. +.++|+++|
T Consensus       111 ~~v~~v~~Dl~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~~--~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iS  181 (390)
T PLN02657        111 PGAEVVFGDVTDAD------SLRKVLFSEGDPVDVVVSCLASRTGG--VKDSWKIDYQATKNSLDAGREV-GAKHFVLLS  181 (390)
T ss_pred             CCceEEEeeCCCHH------HHHHHHHHhCCCCcEEEECCccCCCC--CccchhhHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            46899999999953      3555555    589999998853211  1234678999999999999874 566788888


Q ss_pred             ccCc
Q psy3446          90 TEVP   93 (166)
Q Consensus        90 s~~~   93 (166)
                      +...
T Consensus       182 S~~v  185 (390)
T PLN02657        182 AICV  185 (390)
T ss_pred             eccc
Confidence            7654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=97.34  E-value=0.00054  Score=51.11  Aligned_cols=59  Identities=31%  Similarity=0.369  Sum_probs=38.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .+.++.||+.      +.....++.+  ..|+|||.||.-+..   ..+.++..+|+.||.+++++|.++
T Consensus        55 ~~~~vigDvr------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~  118 (293)
T PF02719_consen   55 EIVPVIGDVR------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH  118 (293)
T ss_dssp             EEE--CTSCC------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT
T ss_pred             ccCceeeccc------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            3456778863      3455677777  899999999963322   246778999999999999999886

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.33  E-value=0.00054  Score=50.91  Aligned_cols=62  Identities=24%  Similarity=0.247  Sum_probs=48.3

Q ss_pred             eeeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchHH---HHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          96 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        96 ~~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~~---~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++..++.+|+.+      .....++++  +.|+|+|.||-.+.+.+   +..+..+||.||.+|||.|++.-
T Consensus        50 ~~~~~fv~~DI~D------~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~  116 (340)
T COG1088          50 SPRYRFVQGDICD------RELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW  116 (340)
T ss_pred             CCCceEEeccccC------HHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhc
Confidence            4577889999743      445677776  58999999997554443   56699999999999999999863

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=97.30  E-value=0.00054  Score=54.22  Aligned_cols=96  Identities=18%  Similarity=0.168  Sum_probs=57.3

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC------ccceeeeEeecCCCCCCCCCCCHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV------PHFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~------~~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      --|+-+||++++|.++...+..+  |           ..+..+++.....      .....++..+.+|+..+       
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~--G-----------~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-------  180 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGR--G-----------DEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-------  180 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHC--C-----------CEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-------
Confidence            45899999999998875533221  1           1111111110000      00112445566775332       


Q ss_pred             hHHHHhccccEEEEcccccc---chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         117 DRELLRTNVNVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       117 ~~~~l~~~~d~i~h~aa~~~---~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                          .+.++|+|||+|+...   +..+....+.+|+.|+.+++++|++.
T Consensus       181 ----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~  225 (436)
T PLN02166        181 ----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV  225 (436)
T ss_pred             ----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh
Confidence                1246899999998643   22345678889999999999999875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=97.28  E-value=0.001  Score=50.16  Aligned_cols=59  Identities=10%  Similarity=0.136  Sum_probs=44.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc--hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~--~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.++      ..++++++++|+|||+|+....  ..+....+.+|+.|+.+++++|.+.
T Consensus        56 ~~~~~~~Dl~~~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~  116 (322)
T PLN02662         56 RLHLFKANLLEE------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV  116 (322)
T ss_pred             ceEEEeccccCc------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC
Confidence            566788887543      3467777889999999986543  2333467889999999999998775

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.001  Score=49.99  Aligned_cols=72  Identities=10%  Similarity=0.121  Sum_probs=45.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-----hhHHHHHHhhhhcHH----HHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-----EKIQLAVAINVLGVR----AMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-----~~~~~~~~~nv~gt~----~ll~l~~   77 (166)
                      .++.++.+|++++.      .++.+.       .++|+|||+||.....     ..+...+.+|+.|..    .++..++
T Consensus        67 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~  140 (306)
T PRK06197         67 ADVTLQELDLTSLA------SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL  140 (306)
T ss_pred             CceEEEECCCCCHH------HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence            36889999999853      233332       3589999999975332     123456889999954    4454444


Q ss_pred             HHhccchhhcccccC
Q psy3446          78 EIRQLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~~~~~~~~~~ss~~   92 (166)
                      +. +..+++++||..
T Consensus       141 ~~-~~~~iV~vSS~~  154 (306)
T PRK06197        141 PV-PGSRVVTVSSGG  154 (306)
T ss_pred             hC-CCCEEEEECCHH
Confidence            32 234677777754

>PLN02206 UDP-glucuronate decarboxylase

Probab=97.25  E-value=0.00073  Score=53.61  Aligned_cols=97  Identities=16%  Similarity=0.155  Sum_probs=57.5

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc------cceeeeEeecCCCCCCCCCCCHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP------HFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~------~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      .-|+-+||++++|.++...+...  |.           .+..++...+...      ....++..+.+|+..+       
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~--G~-----------~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-------  179 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMAR--GD-----------SVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-------  179 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHC--cC-----------EEEEEeCCCccchhhhhhhccCCceEEEECCccCh-------
Confidence            45899999999988875433221  11           1111111000000      0112445566775322       


Q ss_pred             hHHHHhccccEEEEcccccc---chHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         117 DRELLRTNVNVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       117 ~~~~l~~~~d~i~h~aa~~~---~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                          ...++|+|||+|+...   +..+......+|+.|+.+++++|++.+
T Consensus       180 ----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g  225 (442)
T PLN02206        180 ----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG  225 (442)
T ss_pred             ----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence                2346899999998643   223456678999999999999998764

>PLN02572 UDP-sulfoquinovose synthase

Probab=97.22  E-value=0.0025  Score=50.55  Aligned_cols=59  Identities=15%  Similarity=0.076  Sum_probs=40.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH------HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE------KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~------~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.+      ...++++.+  ++|+|||+|+......      +....+.+|+.|+.++++.|++.
T Consensus       114 ~v~~v~~Dl~d------~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~  180 (442)
T PLN02572        114 EIELYVGDICD------FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF  180 (442)
T ss_pred             cceEEECCCCC------HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            45677788743      344666655  4899999997633211      12345678999999999999875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.19  E-value=0.0012  Score=49.99  Aligned_cols=60  Identities=17%  Similarity=0.232  Sum_probs=44.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++.++.+|+..+      ..++++.+++|+|||+|+...+.  .+.......|+.|+.++++.|++.+
T Consensus        57 ~~~~~~~Dl~~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~  118 (322)
T PLN02986         57 RLKLFKADLLEE------SSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETP  118 (322)
T ss_pred             ceEEEecCCCCc------chHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcC
Confidence            566778887543      34677778899999999975432  2334567889999999999998753

>PLN00198 anthocyanidin reductase; Provisional

Probab=97.17  E-value=0.0017  Score=49.39  Aligned_cols=59  Identities=17%  Similarity=0.263  Sum_probs=43.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.++      ..+.++.+++|+|||+|+...+.  .+...+..+|+.|+.++++.|.+.
T Consensus        60 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~  120 (338)
T PLN00198         60 DLKIFGADLTDE------ESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA  120 (338)
T ss_pred             ceEEEEcCCCCh------HHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence            456678887543      44667777899999999965432  334456789999999999998775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=97.14  E-value=0.0018  Score=53.87  Aligned_cols=105  Identities=7%  Similarity=-0.046  Sum_probs=62.6

Q ss_pred             ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc--cceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          42 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP--HFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~--~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      ...|+-+||++++|.++-..+... .|           ..+..+++.++...  ....++..+.+|+.++.     ...+
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~-~g-----------~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~-----~~l~  377 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRD-DN-----------YEVYGLDIGSDAISRFLGHPRFHFVEGDISIHS-----EWIE  377 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC-CC-----------cEEEEEeCCchhhhhhcCCCceEEEeccccCcH-----HHHH
Confidence            346899999999998875433210 00           11111111111000  01124566778874421     1234


Q ss_pred             HHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         120 LLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++++++|+|||+||....   ......++.+|+.|+.++++.|++.+
T Consensus       378 ~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~  424 (660)
T PRK08125        378 YHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN  424 (660)
T ss_pred             HHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC
Confidence            556789999999996442   23345678899999999999998763

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.12  E-value=0.0034  Score=47.96  Aligned_cols=59  Identities=15%  Similarity=0.229  Sum_probs=41.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.+      ...+.+++.+  +|+|+|+|+......   .......+|+.|+.++++.|.+.
T Consensus        56 ~~~~~~~Dl~d------~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~  119 (343)
T TIGR01472        56 RMKLHYGDLTD------SSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL  119 (343)
T ss_pred             ceeEEEeccCC------HHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence            45667788643      3446666653  699999999654221   23445678999999999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06194 hypothetical protein; Provisional

Probab=97.11  E-value=0.0021  Score=47.69  Aligned_cols=57  Identities=21%  Similarity=0.233  Sum_probs=40.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      ++.++.+|++++.      +++.+.+       .+|+|||+||....+       ..+...+++|+.|+.++.+.+.
T Consensus        56 ~~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  126 (287)
T PRK06194         56 EVLGVRTDVSDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFT  126 (287)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHH
Confidence            5788999999853      3444433       479999999986432       2234468899999998777643

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0018  Score=47.84  Aligned_cols=72  Identities=14%  Similarity=0.200  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+|+....+       ..+...+++|+.|+.++++.+...
T Consensus        48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  121 (276)
T PRK06482         48 DRLWVLQLDVTDSA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH  121 (276)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46889999999964      233222       3589999999976432       223457889999999999887432


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .....++++||.
T Consensus       122 ~~~~~~~~iv~~sS~  136 (276)
T PRK06482        122 LRRQGGGRIVQVSSE  136 (276)
T ss_pred             HHhcCCCEEEEEcCc
Confidence               233457777764

>PRK12320 hypothetical protein; Provisional

Probab=97.11  E-value=0.00068  Score=56.39  Aligned_cols=65  Identities=12%  Similarity=0.144  Sum_probs=48.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++.       +..+..++|+|||+|+.....     ...+|+.|+.++++.|++. +. +++++|+.+
T Consensus        40 ~~ve~v~~Dl~d~~-------l~~al~~~D~VIHLAa~~~~~-----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~  104 (699)
T PRK12320         40 PRVDYVCASLRNPV-------LQELAGEADAVIHLAPVDTSA-----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA  104 (699)
T ss_pred             CCceEEEccCCCHH-------HHHHhcCCCEEEEcCccCccc-----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC
Confidence            36889999999862       355667899999999864211     1257999999999999874 34 477888764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.05  E-value=0.0022  Score=46.72  Aligned_cols=72  Identities=18%  Similarity=0.106  Sum_probs=46.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhc----HHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLG----VRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~g----t~~ll~l~   76 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+.+|+.|    +..++..+
T Consensus        57 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  130 (262)
T PRK13394         57 KAIGVAMDVTNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHM  130 (262)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            5788999999854      233222       3489999999975432       2234567899999    55555555


Q ss_pred             HHHhccchhhcccccC
Q psy3446          77 REIRQLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~~~~~~~~~ss~~   92 (166)
                      +...+...++++|+..
T Consensus       131 ~~~~~~~~iv~~ss~~  146 (262)
T PRK13394        131 YKDDRGGVVIYMGSVH  146 (262)
T ss_pred             HhhcCCcEEEEEcchh
Confidence            2223445677777753

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0048  Score=44.82  Aligned_cols=94  Identities=12%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------------cCccEEEEcceeecchh-------hHHHHHHhhhhcHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------------TNVNVIFHGAATVRFDE-------KIQLAVAINVLGVRAML   73 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------------~~~d~Vih~aa~~~~~~-------~~~~~~~~nv~gt~~ll   73 (166)
                      .++.++.+|++++.      .+..+.             .++|+|||+||....+.       .+...+++|+.|+.+++
T Consensus        56 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  129 (254)
T PRK12746         56 GKAFLIEADLNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI  129 (254)
T ss_pred             CcEEEEEcCcCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            36889999999953      233222             25899999999743211       12446779999999999


Q ss_pred             HHHHHH-hccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          74 ELAREI-RQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        74 ~l~~~~-~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      +.+... .....++++|+.....     +.++   ...|+.++...+.+
T Consensus       130 ~~~~~~~~~~~~~v~~sS~~~~~-----~~~~---~~~Y~~sK~a~~~~  170 (254)
T PRK12746        130 QQTLPLLRAEGRVINISSAEVRL-----GFTG---SIAYGLSKGALNTM  170 (254)
T ss_pred             HHHHHHhhcCCEEEEECCHHhcC-----CCCC---CcchHhhHHHHHHH
Confidence            887653 2223567777654321     1111   23466666655443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.01  E-value=0.0029  Score=45.77  Aligned_cols=73  Identities=18%  Similarity=0.187  Sum_probs=49.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+.+|+.++..+++.+... 
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  130 (247)
T PRK12935         57 DVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYI  130 (247)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            6889999999853      233332       2479999999975421       344567899999999988887643 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .....++++|+...
T Consensus       131 ~~~~~~~iv~~sS~~~  146 (247)
T PRK12935        131 TEAEEGRIISISSIIG  146 (247)
T ss_pred             HHcCCcEEEEEcchhh
Confidence              12345677776543

>PLN02650 dihydroflavonol-4-reductase

Probab=97.00  E-value=0.0022  Score=49.09  Aligned_cols=59  Identities=12%  Similarity=0.222  Sum_probs=43.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.++      ..++++++++|.|||+|+.....  .+......+|+.|+.+++++|.+.
T Consensus        57 ~~~~v~~Dl~d~------~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~  117 (351)
T PLN02650         57 RLTLWKADLAVE------GSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA  117 (351)
T ss_pred             ceEEEEecCCCh------hhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc
Confidence            456677887543      34667777899999999865432  233467889999999999999875

>PLN02214 cinnamoyl-CoA reductase

Probab=96.99  E-value=0.0026  Score=48.74  Aligned_cols=57  Identities=18%  Similarity=0.202  Sum_probs=43.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.+      ...++++++++|+|||+|+...  ......+..|+.|+.+++++|.+.
T Consensus        61 ~~~~~~~Dl~d------~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~  117 (342)
T PLN02214         61 RLILCKADLQD------YEALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA  117 (342)
T ss_pred             cEEEEecCcCC------hHHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc
Confidence            45567788643      3456777788999999998653  345667889999999999999875

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0032  Score=46.62  Aligned_cols=59  Identities=19%  Similarity=0.191  Sum_probs=45.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++.      .+..+.      ..+|++||+||.......+...+++|+.|+.++++.+...
T Consensus        50 ~~~~~~~Dv~d~~------~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  114 (275)
T PRK06940         50 DVSTQEVDVSSRE------SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKV  114 (275)
T ss_pred             eEEEEEeecCCHH------HHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHH
Confidence            6788999999863      233222      3589999999976555667778999999999998877653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.94  E-value=0.00098  Score=49.36  Aligned_cols=60  Identities=15%  Similarity=0.029  Sum_probs=41.0

Q ss_pred             HHHhcCccEEEEcceeecchh-----hHHHHHHhhhhcHHHHHHHHHHHhc-cchhhcccccCccc
Q psy3446          36 ELLRTNVNVIFHGAATVRFDE-----KIQLAVAINVLGVRAMLELAREIRQ-LKLFLRLKTEVPHF   95 (166)
Q Consensus        36 ~~~~~~~d~Vih~aa~~~~~~-----~~~~~~~~nv~gt~~ll~l~~~~~~-~~~~~~~ss~~~~~   95 (166)
                      .....++|+|||+||......     ......++|+.++.++++.+++... ...+++.|+...++
T Consensus        52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg  117 (292)
T TIGR01777        52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYG  117 (292)
T ss_pred             hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeC
Confidence            344568999999999754321     2245678899999999999987432 23566666654443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK09186 flagellin modification protein A; Provisional

Probab=96.91  E-value=0.0053  Score=44.62  Aligned_cols=73  Identities=10%  Similarity=0.027  Sum_probs=46.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------h---hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------D---EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~---~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .+.++.+|++++.      .+..+.+       .+|+|||+|+....       .   ..+...+.+|+.+...+.+.+.
T Consensus        56 ~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  129 (256)
T PRK09186         56 KLSLVELDITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFA  129 (256)
T ss_pred             ceeEEEecCCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence            4677899999863      3433333       38999999974321       1   2234567889988887766554


Q ss_pred             HH---hccchhhcccccCc
Q psy3446          78 EI---RQLKLFLRLKTEVP   93 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~~~   93 (166)
                      ..   .+..+++++|+.+.
T Consensus       130 ~~~~~~~~~~iv~~sS~~~  148 (256)
T PRK09186        130 KYFKKQGGGNLVNISSIYG  148 (256)
T ss_pred             HHHHhcCCceEEEEechhh
Confidence            32   23346778877554

>KOG1372|consensus

Probab=96.89  E-value=0.00061  Score=49.43  Aligned_cols=101  Identities=14%  Similarity=0.126  Sum_probs=68.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHh--ccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIR--QLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~--~~~~~~   86 (166)
                      .......||++|..-      +.++.+  +++-|+|+||..++..+.   +..-++...||..+++..+.+.  ...+|-
T Consensus        83 ~~mkLHYgDmTDss~------L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfY  156 (376)
T KOG1372|consen   83 ASMKLHYGDMTDSSC------LIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFY  156 (376)
T ss_pred             ceeEEeeccccchHH------HHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEE
Confidence            467889999999532      444444  578999999986544333   2234567789999999988753  233455


Q ss_pred             cccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          87 RLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        87 ~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      +.||..-++  ++.+++-.-..|.++.|+|...++.
T Consensus       157 QAstSElyG--kv~e~PQsE~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  157 QASTSELYG--KVQEIPQSETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             ecccHhhcc--cccCCCcccCCCCCCCChhHHhhhh
Confidence            555554444  4445555555688999999999875

>PLN00016 RNA-binding protein; Provisional

Probab=96.85  E-value=0.00021  Score=55.40  Aligned_cols=59  Identities=17%  Similarity=0.167  Sum_probs=42.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH--hcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL--RTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~--~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .++++.||+++.         ..+  ..++|+|||+++.             +..++.++++.|++ .+.++|+++||..
T Consensus       111 ~v~~v~~D~~d~---------~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~-~gvkr~V~~SS~~  167 (378)
T PLN00016        111 GVKTVWGDPADV---------KSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKS-PGLKQFLFCSSAG  167 (378)
T ss_pred             CceEEEecHHHH---------HhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHH-cCCCEEEEEccHh
Confidence            488999998761         222  2468999999753             13467788998887 4567899999987


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       168 vyg~  171 (378)
T PLN00016        168 VYKK  171 (378)
T ss_pred             hcCC
Confidence            7653

>KOG1431|consensus

Probab=96.85  E-value=9.2e-05  Score=52.91  Aligned_cols=116  Identities=17%  Similarity=0.067  Sum_probs=65.8

Q ss_pred             HhHHHHhc--CccEEEEcceeec-c---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCC
Q psy3446          33 TDRELLRT--NVNVIFHGAATVR-F---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDV  106 (166)
Q Consensus        33 ~~~~~~~~--~~d~Vih~aa~~~-~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~  106 (166)
                      ++.+.+++  ++.+|||+||.++ +   ..+..++++.|+.-.-+++..|-+..-.+.+...||+.-. ..-..|+++..
T Consensus        45 a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP-dkt~yPIdEtm  123 (315)
T KOG1431|consen   45 ADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP-DKTSYPIDETM  123 (315)
T ss_pred             HHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC-CCCCCCCCHHH
Confidence            34556654  6899999999864 1   1223568888988888999988875434444455665321 11122333321


Q ss_pred             CC--CCCCCCH--HhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHH
Q psy3446         107 SL--PGLGLSE--TDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVR  153 (166)
Q Consensus       107 ~~--~~~gls~--~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~  153 (166)
                      ..  |.- -+.  |.+.|-.  +|+- +.|....++..+..-.++|++|+.
T Consensus       124 vh~gpph-psN~gYsyAKr~--idv~-n~aY~~qhg~~~tsviPtNvfGph  170 (315)
T KOG1431|consen  124 VHNGPPH-PSNFGYSYAKRM--IDVQ-NQAYRQQHGRDYTSVIPTNVFGPH  170 (315)
T ss_pred             hccCCCC-CCchHHHHHHHH--HHHH-HHHHHHHhCCceeeeccccccCCC
Confidence            11  111 111  3444411  2322 345555677777778899999874

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=96.85  E-value=0.0037  Score=47.78  Aligned_cols=101  Identities=10%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             EEEEcceeecchhhHHHHHHh----hhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAI----NVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~----nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      .|+-+||++++|.++-..+..    +|.+..      +....   ..   ...  ...++.++.+|+..     +....+
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~------r~~~~---~~---~~~--~~~~~~~~~~Dl~~-----~~~~~~   63 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMD------MQTDR---LG---DLV--NHPRMHFFEGDITI-----NKEWIE   63 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEe------CcHHH---HH---Hhc--cCCCeEEEeCCCCC-----CHHHHH
Confidence            378899999999887543321    233221      10000   00   000  11245667788742     223455


Q ss_pred             HHhccccEEEEcccccc---chHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         120 LLRTNVNVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~---~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++++++|+|||+||...   +.......+.+|+.|+.+++++|++.+
T Consensus        64 ~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~  110 (347)
T PRK11908         64 YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG  110 (347)
T ss_pred             HHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            67778999999998533   223445678999999999999998753

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.85  E-value=0.0025  Score=48.21  Aligned_cols=97  Identities=20%  Similarity=0.136  Sum_probs=58.9

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc-ceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH-FLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~-~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      |+-+||+++.|.++...+...  |           ..+..+.+-.+.... ...++.++.+|+.+      +..+.+.++
T Consensus         3 IlVtGatG~iG~~lv~~Ll~~--g-----------~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d------~~~l~~al~   63 (317)
T CHL00194          3 LLVIGATGTLGRQIVRQALDE--G-----------YQVRCLVRNLRKASFLKEWGAELVYGDLSL------PETLPPSFK   63 (317)
T ss_pred             EEEECCCcHHHHHHHHHHHHC--C-----------CeEEEEEcChHHhhhHhhcCCEEEECCCCC------HHHHHHHHC
Confidence            677899998888874433211  1           111111111100000 01245677888743      345677778


Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|+|||+++..  ......+..+|+.|+.+++++|++.
T Consensus        64 g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~  100 (317)
T CHL00194         64 GVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA  100 (317)
T ss_pred             CCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc
Confidence            999999997632  2233457788999999999999875

>PRK05717 oxidoreductase; Validated

Probab=96.84  E-value=0.007  Score=44.11  Aligned_cols=98  Identities=12%  Similarity=0.055  Sum_probs=57.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      .++.++.+|++++.- + ...++++.   ..+|+|||+|+.....         ..+...+.+|+.|+..+++.+.... 
T Consensus        56 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  133 (255)
T PRK05717         56 ENAWFIAMDVADEAQ-V-AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR  133 (255)
T ss_pred             CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            368899999998631 0 01122222   2579999999975321         2234678899999999999886431 


Q ss_pred             -ccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          81 -QLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        81 -~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                       ....++.+||.....        +......|+.++...+.+
T Consensus       134 ~~~g~ii~~sS~~~~~--------~~~~~~~Y~~sKaa~~~~  167 (255)
T PRK05717        134 AHNGAIVNLASTRARQ--------SEPDTEAYAASKGGLLAL  167 (255)
T ss_pred             HcCcEEEEEcchhhcC--------CCCCCcchHHHHHHHHHH
Confidence             123455666543221        111124466777655443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.81  E-value=0.0021  Score=46.64  Aligned_cols=72  Identities=14%  Similarity=0.183  Sum_probs=50.6

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc----CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhhcccc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR-QLKLFLRLKT   90 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~----~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~ss   90 (166)
                      .+++.+|+++.      ++++.+.+    ++|+|||+|+... ..++...+.+|+.|+..+.+.+.... +..+++++||
T Consensus        25 ~~~~~~Dl~~~------~~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS   97 (241)
T PRK12428         25 DGFIQADLGDP------ASIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVAS   97 (241)
T ss_pred             hHhhcccCCCH------HHHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCc
Confidence            45788999884      33444433    5899999999754 34567788999999999998876532 2246777777


Q ss_pred             cCcc
Q psy3446          91 EVPH   94 (166)
Q Consensus        91 ~~~~   94 (166)
                      ...+
T Consensus        98 ~~~~  101 (241)
T PRK12428         98 LAGA  101 (241)
T ss_pred             HHhh
Confidence            6543

>KOG1430|consensus

Probab=96.81  E-value=0.003  Score=48.56  Aligned_cols=102  Identities=21%  Similarity=0.275  Sum_probs=65.8

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC--cc-----ceeeeEeecCCCCCCCCCCCH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV--PH-----FLEKISAVAGDVSLPGLGLSE  115 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~--~~-----~~~~~~~v~gD~~~~~~gls~  115 (166)
                      ..|.-+||.+++|.++-..+.-|..           ....+.++......  ..     ...++..+.+|+      .+.
T Consensus         5 ~~vlVtGG~GflG~hlv~~L~~~~~-----------~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~------~~~   67 (361)
T KOG1430|consen    5 LSVLVTGGSGFLGQHLVQALLENEL-----------KLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDL------LDA   67 (361)
T ss_pred             CEEEEECCccHHHHHHHHHHHhccc-----------ccEEEEeccCccccccchhhhcccCCceeEEecch------hhh
Confidence            5677899999999998665544332           12233344333211  11     134555566775      334


Q ss_pred             HhHHHHhccccEEEEcccccc--chH-HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         116 TDRELLRTNVNVIFHGAATVR--FDE-KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       116 ~~~~~l~~~~d~i~h~aa~~~--~~~-~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ....+...++ .|+|+||...  +.. .......+||.||+++++.|++.
T Consensus        68 ~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~  116 (361)
T KOG1430|consen   68 NSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL  116 (361)
T ss_pred             hhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh
Confidence            4567777888 7888887532  333 36778999999999999999986

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0083  Score=43.42  Aligned_cols=72  Identities=14%  Similarity=0.085  Sum_probs=47.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------h---hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------D---EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~---~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+....       .   ..+...+.+|+.|+.++++.+.
T Consensus        56 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (250)
T PRK07774         56 TAIAVQVDVSDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVY  129 (250)
T ss_pred             cEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            5778999999853      232222       358999999997421       1   2234568899999999988876


Q ss_pred             HHh---ccchhhcccccC
Q psy3446          78 EIR---QLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~~---~~~~~~~~ss~~   92 (166)
                      ...   +...++++||..
T Consensus       130 ~~~~~~~~~~iv~~sS~~  147 (250)
T PRK07774        130 KHMAKRGGGAIVNQSSTA  147 (250)
T ss_pred             HHHHHhCCcEEEEEeccc
Confidence            532   123566666654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=96.78  E-value=0.0038  Score=46.85  Aligned_cols=50  Identities=22%  Similarity=0.232  Sum_probs=37.0

Q ss_pred             CHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         114 SETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       114 s~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +....+++.+  +.|+|||+||.....   ......+.+|+.|+.++++.|++..
T Consensus        42 d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g   96 (299)
T PRK09987         42 NPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG   96 (299)
T ss_pred             CHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3445666655  479999999976533   2345677899999999999998763

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0067  Score=44.85  Aligned_cols=73  Identities=15%  Similarity=0.116  Sum_probs=48.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+....+       ..+...+++|+.|+.++.+.+...
T Consensus        50 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  123 (277)
T PRK06180         50 DRALARLLDVTDFD------AIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG  123 (277)
T ss_pred             CCeeEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            36888999999953      233332       2589999999985432       223456889999999999875432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       124 ~~~~~~~~iv~iSS~~  139 (277)
T PRK06180        124 MRARRRGHIVNITSMG  139 (277)
T ss_pred             HhccCCCEEEEEeccc
Confidence               1234567777643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.71  E-value=0.0075  Score=43.82  Aligned_cols=59  Identities=15%  Similarity=0.150  Sum_probs=41.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc---------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~---------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++.      .+..+       ...+|+|||+|+....         ...+...+++|+.|+.++++.+.
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  125 (256)
T PRK12745         52 VEVIFFPADVADLS------AHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA  125 (256)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence            36899999999853      22222       2368999999986431         13345578999999999888765


Q ss_pred             H
Q psy3446          78 E   78 (166)
Q Consensus        78 ~   78 (166)
                      .
T Consensus       126 ~  126 (256)
T PRK12745        126 K  126 (256)
T ss_pred             H
Confidence            4

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.69  E-value=0.0075  Score=45.60  Aligned_cols=59  Identities=17%  Similarity=0.209  Sum_probs=44.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.++      ..++++.+++|+|+|+|+.....   .+.......|+.|+.++++.|.+.
T Consensus        57 ~~~~~~~D~~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~  118 (325)
T PLN02989         57 RLKLFKADLLDE------GSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV  118 (325)
T ss_pred             ceEEEeCCCCCc------hHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc
Confidence            456677887543      34677777899999999964322   234567889999999999999774

>PLN02253 xanthoxin dehydrogenase

Probab=96.69  E-value=0.0083  Score=44.33  Aligned_cols=59  Identities=15%  Similarity=0.161  Sum_probs=42.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc---------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~---------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++.      .+..+.+       ++|+|||+||....         ...+...+++|+.|+.++++.+.
T Consensus        66 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  139 (280)
T PLN02253         66 PNVCFFHCDVTVED------DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA  139 (280)
T ss_pred             CceEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            36889999999853      3333332       68999999997532         12345678999999998888665


Q ss_pred             H
Q psy3446          78 E   78 (166)
Q Consensus        78 ~   78 (166)
                      .
T Consensus       140 ~  140 (280)
T PLN02253        140 R  140 (280)
T ss_pred             H
Confidence            4

>PLN02778 3,5-epimerase/4-reductase

Probab=96.67  E-value=0.0036  Score=47.03  Aligned_cols=39  Identities=18%  Similarity=0.312  Sum_probs=31.8

Q ss_pred             cccEEEEcccccc------chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVR------FDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~------~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +.|+|||+||...      ..........+|+.|+.+++++|++.
T Consensus        57 ~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~  101 (298)
T PLN02778         57 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER  101 (298)
T ss_pred             CCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5899999999753      12345678899999999999999875

>PRK06182 short chain dehydrogenase; Validated

Probab=96.67  E-value=0.007  Score=44.60  Aligned_cols=71  Identities=10%  Similarity=0.199  Sum_probs=45.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHH----HH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLE----LA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~----l~   76 (166)
                      +++++.+|++++.      .++.+.+       ++|+|||+|+....+       ..+...+++|+.|+..+..    .+
T Consensus        47 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  120 (273)
T PRK06182         47 GVHPLSLDVTDEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHM  120 (273)
T ss_pred             CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHH
Confidence            5789999999853      3444333       689999999976432       2335578899998655544    33


Q ss_pred             HHHhccchhhcccccC
Q psy3446          77 REIRQLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~~~~~~~~~ss~~   92 (166)
                      ++ .+...++++||..
T Consensus       121 ~~-~~~g~iv~isS~~  135 (273)
T PRK06182        121 RA-QRSGRIINISSMG  135 (273)
T ss_pred             Hh-cCCCEEEEEcchh
Confidence            33 2234567777643

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.66  E-value=0.0068  Score=45.88  Aligned_cols=73  Identities=16%  Similarity=0.071  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .++.+.+       .+|+|||+||....        ...++..+.+|+.|+.++.+.+..
T Consensus        55 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  128 (322)
T PRK07453         55 DSYTIIHIDLGDLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE  128 (322)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            36889999999853      2333322       48999999996421        123456789999999998887654


Q ss_pred             Hh---c--cchhhcccccC
Q psy3446          79 IR---Q--LKLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~--~~~~~~~ss~~   92 (166)
                      ..   +  ..+++++||..
T Consensus       129 ~~~~~~~~~~riV~vsS~~  147 (322)
T PRK07453        129 DLKKSPAPDPRLVILGTVT  147 (322)
T ss_pred             HHHhCCCCCceEEEEcccc
Confidence            31   1  13577777643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.66  E-value=0.01  Score=42.85  Aligned_cols=72  Identities=14%  Similarity=0.094  Sum_probs=49.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+....       ...+...+..|+.++..+++.+... 
T Consensus        56 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  129 (251)
T PRK12826         56 KARARQVDVRDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPAL  129 (251)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5889999999853      233333       368999999987653       1233457889999999999877532 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++|+..
T Consensus       130 ~~~~~~~ii~~ss~~  144 (251)
T PRK12826        130 IRAGGGRIVLTSSVA  144 (251)
T ss_pred             HHcCCcEEEEEechH
Confidence              2234566776654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.66  E-value=0.0082  Score=43.57  Aligned_cols=73  Identities=19%  Similarity=0.096  Sum_probs=46.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+++|+.|+..+.+.+...
T Consensus        53 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  126 (258)
T PRK12429         53 GKAIGVAMDVTDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPI  126 (258)
T ss_pred             CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence            46889999999853      233332       3589999999975432       123446778999966665554322


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++|+..
T Consensus       127 ~~~~~~~~iv~iss~~  142 (258)
T PRK12429        127 MKAQGGGRIINMASVH  142 (258)
T ss_pred             HHhcCCeEEEEEcchh
Confidence               2345677777654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.66  E-value=0.013  Score=42.73  Aligned_cols=93  Identities=12%  Similarity=0.162  Sum_probs=57.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      ++..+.       ..+|++||+||.....       ..+...+.+|+.|+..+.+.+....
T Consensus        58 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  131 (253)
T PRK08993         58 RFLSLTADLRKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHF  131 (253)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            5788999999842      233332       3589999999975322       3455688999999998888765421


Q ss_pred             -c---cchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          81 -Q---LKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        81 -~---~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                       .   ...++++||.....        +....+.|+.++...+.+
T Consensus       132 ~~~~~~g~iv~isS~~~~~--------~~~~~~~Y~~sKaa~~~~  168 (253)
T PRK08993        132 IAQGNGGKIINIASMLSFQ--------GGIRVPSYTASKSGVMGV  168 (253)
T ss_pred             HhCCCCeEEEEECchhhcc--------CCCCCcchHHHHHHHHHH
Confidence             1   13466666654321        111124566677654443

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.014  Score=42.86  Aligned_cols=73  Identities=14%  Similarity=0.181  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+|+.....       ..+...+.+|+.|+..+.+.+...
T Consensus        59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (263)
T PRK07814         59 RRAHVVAADLAHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL  132 (263)
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence            36889999999853      233222       3689999999864321       233557889999999999887642


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++|+..
T Consensus       133 ~~~~~~~g~iv~~sS~~  149 (263)
T PRK07814        133 MLEHSGGGSVINISSTM  149 (263)
T ss_pred             HHhhcCCeEEEEEcccc
Confidence            1    223466666643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.63  E-value=0.009  Score=45.39  Aligned_cols=59  Identities=17%  Similarity=0.176  Sum_probs=44.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      .....++.+++|+|||+|+....   ..+....+.+|+.|+.+++++|.+.
T Consensus        54 ~~~~v~~Dl~d------~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~  115 (324)
T TIGR03589        54 CLRFFIGDVRD------KERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN  115 (324)
T ss_pred             cEEEEEccCCC------HHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            45667788743      35567777789999999986432   1234567899999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.63  E-value=0.0027  Score=46.33  Aligned_cols=74  Identities=11%  Similarity=0.106  Sum_probs=51.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-cCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      +++++.+|++++.     ..+.... .++|+|||+++......+ ...+.+|..|+.++++.+++ .+.++++++|+...
T Consensus        63 ~~~~~~~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~-~~~~~iV~iSS~~v  135 (251)
T PLN00141         63 SLQIVRADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILV  135 (251)
T ss_pred             ceEEEEeeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHH-cCCCEEEEEccccc
Confidence            6899999999841     2344444 589999999886432122 12356788899999999876 35567888888765


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      ++
T Consensus       136 ~g  137 (251)
T PLN00141        136 NG  137 (251)
T ss_pred             cC
Confidence            43

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.62  E-value=0.0084  Score=43.10  Aligned_cols=74  Identities=14%  Similarity=0.172  Sum_probs=50.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|.|||+|+.....       ..+...+++|+.++.++.+.+...
T Consensus        56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  129 (249)
T PRK12825         56 RRAQAVQADVTDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP  129 (249)
T ss_pred             CceEEEECCcCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46889999999853      233322       3689999999965332       223557889999999998876431


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++|+...
T Consensus       130 ~~~~~~~~~i~~SS~~~  146 (249)
T PRK12825        130 MRKQRGGRIVNISSVAG  146 (249)
T ss_pred             HHhcCCCEEEEECcccc
Confidence               23456777776543

>KOG1371|consensus

Probab=96.62  E-value=0.0054  Score=46.20  Aligned_cols=61  Identities=21%  Similarity=0.236  Sum_probs=45.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchHH---HHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~~---~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++.+..+|+.      +....+++.+  ..|.|+|.|+...-+.+   +..+...|+.||.++||.+++.+
T Consensus        54 ~~v~f~~~Dl~------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~  119 (343)
T KOG1371|consen   54 KSVFFVEGDLN------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN  119 (343)
T ss_pred             CceEEEEeccC------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence            56778888973      4455677764  47999999997543333   34477889999999999998864

>PRK06128 oxidoreductase; Provisional

Probab=96.60  E-value=0.01  Score=44.54  Aligned_cols=73  Identities=14%  Similarity=0.051  Sum_probs=49.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++.      ..+.+       ..++|+|||+|+....        ...+...+++|+.|+..+++.+...
T Consensus       107 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  180 (300)
T PRK06128        107 KAVALPGDLKDEA------FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPH  180 (300)
T ss_pred             eEEEEecCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            5788999999853      23332       2368999999996421        1234568899999999999887653


Q ss_pred             h-ccchhhcccccCc
Q psy3446          80 R-QLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~-~~~~~~~~ss~~~   93 (166)
                      . ....++++||...
T Consensus       181 ~~~~~~iv~~sS~~~  195 (300)
T PRK06128        181 LPPGASIINTGSIQS  195 (300)
T ss_pred             cCcCCEEEEECCccc
Confidence            2 2235666666543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=96.55  E-value=0.0065  Score=46.45  Aligned_cols=59  Identities=19%  Similarity=0.252  Sum_probs=42.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      .....+++.  ++|+|||+|+.....   .....++.+|+.|+.++++.|.+.
T Consensus        51 ~~~~~~~Dl~d------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~  114 (352)
T PRK10084         51 RYVFEHADICD------RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY  114 (352)
T ss_pred             ceEEEEecCCC------HHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence            34556778643      344555554  489999999975432   235678999999999999999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.54  E-value=0.0059  Score=45.39  Aligned_cols=47  Identities=23%  Similarity=0.293  Sum_probs=37.7

Q ss_pred             HhHHHHhcc--ccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         116 TDRELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       116 ~~~~~l~~~--~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ....++..+  .|+|||+||.+..+.   ....++.+|..|+.++.++|++.
T Consensus        40 ~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~   91 (281)
T COG1091          40 DAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV   91 (281)
T ss_pred             HHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh
Confidence            345556553  599999999887665   35779999999999999999884

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=96.52  E-value=0.011  Score=45.36  Aligned_cols=59  Identities=20%  Similarity=0.244  Sum_probs=42.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+..      ...++++.+  ++|+|||+||......   .....+.+|+.|+.+++++|.+.
T Consensus        52 ~~~~~~~Dl~d------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~  115 (355)
T PRK10217         52 RFAFEKVDICD------RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAY  115 (355)
T ss_pred             ceEEEECCCcC------hHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHh
Confidence            34556777643      234555555  4899999999754332   34678899999999999999863

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.50  E-value=0.011  Score=43.08  Aligned_cols=77  Identities=16%  Similarity=0.097  Sum_probs=48.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH----
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI----   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~----   79 (166)
                      .++.++.+|++++.- + ....+.+   ...+|+|||+|+....       ...+...+++|+.|+.++++.+...    
T Consensus        61 ~~~~~~~~Dl~d~~~-i-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~  138 (259)
T PRK08213         61 IDALWIAADVADEAD-I-ERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP  138 (259)
T ss_pred             CeEEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Confidence            367899999998642 0 0011222   1358999999986421       1223456789999999999876543    


Q ss_pred             hccchhhcccccC
Q psy3446          80 RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ~~~~~~~~~ss~~   92 (166)
                      .+...++++|+..
T Consensus       139 ~~~~~~v~~sS~~  151 (259)
T PRK08213        139 RGYGRIINVASVA  151 (259)
T ss_pred             cCCeEEEEECChh
Confidence            1334566776643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.49  E-value=0.011  Score=42.53  Aligned_cols=72  Identities=13%  Similarity=0.207  Sum_probs=48.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|+++..      .+..+       ...+|.|||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (245)
T PRK12936         52 ERVKIFPANLSDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP  125 (245)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            36889999999853      23333       2358999999997532       1234567889999998887765432


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .....++++|+.
T Consensus       126 ~~~~~~~~iv~~sS~  140 (245)
T PRK12936        126 MMRRRYGRIINITSV  140 (245)
T ss_pred             HHHhCCCEEEEECCH
Confidence               223456777764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.49  E-value=0.011  Score=40.72  Aligned_cols=66  Identities=15%  Similarity=0.184  Sum_probs=51.0

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..+++++.||+.++      +.+...+.++|+|||+++...-          ....++++++.+++. +.++++.+|+..
T Consensus        38 ~~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~  100 (183)
T PF13460_consen   38 SPGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAG  100 (183)
T ss_dssp             CTTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETT
T ss_pred             ccccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccc
Confidence            46899999999885      4577888899999999975433          156678888988874 567788888877


Q ss_pred             ccc
Q psy3446          93 PHF   95 (166)
Q Consensus        93 ~~~   95 (166)
                      .+.
T Consensus       101 ~~~  103 (183)
T PF13460_consen  101 VYR  103 (183)
T ss_dssp             GTT
T ss_pred             cCC
Confidence            654

...

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.0091  Score=43.86  Aligned_cols=73  Identities=12%  Similarity=0.116  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .+++++.+|++++.      .++.+.+       .+|+|||+|+....+       ..+...+++|+.|+..+...+...
T Consensus        45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~  118 (270)
T PRK06179         45 PGVELLELDVTDDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH  118 (270)
T ss_pred             CCCeeEEeecCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46889999999853      3444433       479999999975432       233567889999999888765331


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+..+++.+||..
T Consensus       119 ~~~~~~~~iv~isS~~  134 (270)
T PRK06179        119 MRAQGSGRIINISSVL  134 (270)
T ss_pred             HHhcCCceEEEECCcc
Confidence               2345567777643

>PRK09135 pteridine reductase; Provisional

Probab=96.47  E-value=0.015  Score=41.85  Aligned_cols=58  Identities=14%  Similarity=0.086  Sum_probs=41.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .+.++.+|++++.      .+..+.       ..+|+|||+|+....       ...+...+++|+.|+.++++.+..
T Consensus        58 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  129 (249)
T PRK09135         58 SAAALQADLLDPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP  129 (249)
T ss_pred             ceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence            5789999999853      233333       357999999996431       123456788999999999998764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.45  E-value=0.016  Score=41.69  Aligned_cols=72  Identities=15%  Similarity=0.227  Sum_probs=47.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|.|||+|+.....       ..+...+++|+.|+.++.+.+... 
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  130 (239)
T PRK07666         57 KVVIATADVSDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSM  130 (239)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            6889999999853      233332       3689999999875322       233557889999999888876542 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .....++++++..
T Consensus       131 ~~~~~~~iv~~ss~~  145 (239)
T PRK07666        131 IERQSGDIINISSTA  145 (239)
T ss_pred             HhCCCcEEEEEcchh
Confidence              1223455565543

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.013  Score=43.31  Aligned_cols=75  Identities=12%  Similarity=0.153  Sum_probs=45.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh----cCccEEEEcceeecch-------hhHHHHHHhhhhcHH----HHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR----TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVR----AMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~----~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~----~ll~l~~~~   79 (166)
                      +++++.+|++++.- + ....+.+.    ..+|+|||+|+....+       ..+...+++|+.|..    .++..+++.
T Consensus        48 ~~~~~~~Dl~d~~~-~-~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~  125 (277)
T PRK05993         48 GLEAFQLDYAEPES-I-AALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ  125 (277)
T ss_pred             CceEEEccCCCHHH-H-HHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence            57889999998531 0 01122221    2579999999875432       123457889999954    445544442


Q ss_pred             hccchhhcccccC
Q psy3446          80 RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ~~~~~~~~~ss~~   92 (166)
                       +...++++||..
T Consensus       126 -~~g~iv~isS~~  137 (277)
T PRK05993        126 -GQGRIVQCSSIL  137 (277)
T ss_pred             -CCCEEEEECChh
Confidence             334577777754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.40  E-value=0.013  Score=41.96  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=48.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .++++.       ..+|.|||+|+.....       ..+...+++|+.++..+.+.+... 
T Consensus        49 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  122 (239)
T TIGR01830        49 KALGVVCDVSDRE------DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIM  122 (239)
T ss_pred             ceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5789999999853      233332       3479999999976421       233557889999999998877653 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .....++++|+..
T Consensus       123 ~~~~~~~~v~~sS~~  137 (239)
T TIGR01830       123 IKQRSGRIINISSVV  137 (239)
T ss_pred             HhcCCeEEEEECCcc
Confidence              1234577777643

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.013  Score=43.29  Aligned_cols=73  Identities=10%  Similarity=0.109  Sum_probs=48.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+||....+       ..+...+++|+.++..+.+.+...
T Consensus        49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (275)
T PRK08263         49 DRLLPLALDVTDRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY  122 (275)
T ss_pred             CCeeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            35788999999853      232222       3579999999976432       244567899999998887765321


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       123 ~~~~~~~~iv~vsS~~  138 (275)
T PRK08263        123 LREQRSGHIIQISSIG  138 (275)
T ss_pred             HHhcCCCEEEEEcChh
Confidence               2234566776643

>PRK06398 aldose dehydrogenase; Validated

Probab=96.36  E-value=0.02  Score=41.94  Aligned_cols=94  Identities=11%  Similarity=0.087  Sum_probs=57.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      +++.+.       ..+|+|||+|+....       ...+...+.+|+.|+..+.+.+... 
T Consensus        45 ~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  118 (258)
T PRK06398         45 DVDYFKVDVSNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYM  118 (258)
T ss_pred             ceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            6889999999963      233332       358999999997432       1233457899999999888766542 


Q ss_pred             --hccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          80 --RQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        80 --~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                        .....++++||.....     +.+   ....|+.++...+.+.
T Consensus       119 ~~~~~g~iv~isS~~~~~-----~~~---~~~~Y~~sKaal~~~~  155 (258)
T PRK06398        119 LKQDKGVIINIASVQSFA-----VTR---NAAAYVTSKHAVLGLT  155 (258)
T ss_pred             HHcCCeEEEEeCcchhcc-----CCC---CCchhhhhHHHHHHHH
Confidence              1234566776643321     111   1234666666555443

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.019  Score=41.41  Aligned_cols=72  Identities=22%  Similarity=0.209  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+.++.       .++|+|||+|+....       ...+...+.+|+.|+..++..+...
T Consensus        55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  128 (245)
T PRK12937         55 GRAIAVQADVADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH  128 (245)
T ss_pred             CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence            46889999999853      233333       268999999997532       1233457889999999988776543


Q ss_pred             h-ccchhhccccc
Q psy3446          80 R-QLKLFLRLKTE   91 (166)
Q Consensus        80 ~-~~~~~~~~ss~   91 (166)
                      . ....++++|+.
T Consensus       129 ~~~~~~iv~~ss~  141 (245)
T PRK12937        129 LGQGGRIINLSTS  141 (245)
T ss_pred             hccCcEEEEEeec
Confidence            2 22356666654

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.02  Score=41.07  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=48.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+++|+.|+..+++.+...
T Consensus        54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (237)
T PRK07326         54 GNVLGLAADVRDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA  127 (237)
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            46889999999853      233222       3689999999875432       223456889999999888776543


Q ss_pred             h--ccchhhcccccC
Q psy3446          80 R--QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~--~~~~~~~~ss~~   92 (166)
                      .  ....++.+|+..
T Consensus       128 ~~~~~~~iv~~ss~~  142 (237)
T PRK07326        128 LKRGGGYIINISSLA  142 (237)
T ss_pred             HHHCCeEEEEECChh
Confidence            2  223466666643

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.32  E-value=0.022  Score=41.22  Aligned_cols=77  Identities=9%  Similarity=0.079  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHH---hHHHHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSET---DRELLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~---~~~~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++.- + ..   .+.+....+|+|||+|+.....       ..+...+..|+.|+..+++.+...   .
T Consensus        50 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~  127 (255)
T TIGR01963        50 GSVIYLVADVTKEDE-I-ADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ  127 (255)
T ss_pred             CceEEEECCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            368899999998531 0 00   1222234689999999875421       123456778999988888766432   2


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      ....++++|+..
T Consensus       128 ~~~~~v~~ss~~  139 (255)
T TIGR01963       128 GWGRIINIASAH  139 (255)
T ss_pred             CCeEEEEEcchh
Confidence            345677777653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=96.30  E-value=0.017  Score=43.19  Aligned_cols=59  Identities=25%  Similarity=0.271  Sum_probs=43.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+..      +..+.+++++  +|+|||+|+.....   ........+|+.|+.++++.|.+.
T Consensus        51 ~~~~~~~Dl~~------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (317)
T TIGR01181        51 RYRFVKGDIGD------RELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY  114 (317)
T ss_pred             CcEEEEcCCcC------HHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence            45567778743      3456666665  89999999865432   234567889999999999999874

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.29  E-value=0.019  Score=41.53  Aligned_cols=72  Identities=15%  Similarity=0.080  Sum_probs=47.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecchh-------hHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFDE-------KIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~~-------~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ++..+.       ..+|+|||+|+......       .+...+.+|+.|+..+.+.+...
T Consensus        54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (250)
T PRK08063         54 RKALAVKANVGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL  127 (250)
T ss_pred             CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            35889999999863      233332       25899999998654221       22346789999999998877653


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...++++|+.
T Consensus       128 ~~~~~~g~iv~~sS~  142 (250)
T PRK08063        128 MEKVGGGKIISLSSL  142 (250)
T ss_pred             HHhcCCeEEEEEcch
Confidence            2   23367777764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=96.28  E-value=0.014  Score=41.67  Aligned_cols=60  Identities=32%  Similarity=0.365  Sum_probs=44.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccc--cEEEEcccccc---chHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNV--NVIFHGAATVR---FDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~--d~i~h~aa~~~---~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++..+.+|+.      +...++++.+..  |.|||+|+...   ...........|+.++.+++++|.+.+
T Consensus        43 ~~~~~~~dl~------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~  107 (236)
T PF01370_consen   43 NVEFVIGDLT------DKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG  107 (236)
T ss_dssp             TEEEEESETT------SHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEeecc------ccccccccccccCceEEEEeecccccccccccccccccccccccccccccccccc
Confidence            5566777763      456677776655  99999999742   123456678889999999999998764

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.0048  Score=44.64  Aligned_cols=71  Identities=14%  Similarity=0.064  Sum_probs=48.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHh-ccchh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR-QLKLF   85 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~   85 (166)
                      ++.++.+|++++.      ++..+.       ..+|+|||+|+.... ...+...+++|+.|+.++++.+.... ....+
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~i  130 (248)
T PRK07806         57 RASAVGADLTDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRV  130 (248)
T ss_pred             ceEEEEcCCCCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceE
Confidence            5788999999853      233222       358999999986432 12234567899999999999887642 22356


Q ss_pred             hccccc
Q psy3446          86 LRLKTE   91 (166)
Q Consensus        86 ~~~ss~   91 (166)
                      +++||.
T Consensus       131 v~isS~  136 (248)
T PRK07806        131 VFVTSH  136 (248)
T ss_pred             EEEeCc
Confidence            777764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.28  E-value=0.02  Score=41.71  Aligned_cols=94  Identities=13%  Similarity=0.163  Sum_probs=57.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|++||+|+....       ...+...+.+|+.++..+++.+...
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (257)
T PRK07067         52 PAAIAVSLDVTRQD------SIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH  125 (257)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            35889999999853      233332       358999999997532       1234567889999999999887643


Q ss_pred             h-c---cchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          80 R-Q---LKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        80 ~-~---~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      . .   ...++++|+.....        +......|+.++...+.+
T Consensus       126 ~~~~~~~~~iv~~sS~~~~~--------~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067        126 MVEQGRGGKIINMASQAGRR--------GEALVSHYCATKAAVISY  163 (257)
T ss_pred             HHhcCCCcEEEEeCCHHhCC--------CCCCCchhhhhHHHHHHH
Confidence            2 1   12456666642210        111234566777654444

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.021  Score=41.24  Aligned_cols=58  Identities=22%  Similarity=0.193  Sum_probs=40.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....        ..+...+.+|+.|+..+++.+..
T Consensus        53 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         53 EALAVAADVADEA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             cEEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5788999999853      233332       2689999999875321        12345788999999988776654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.25  E-value=0.019  Score=41.75  Aligned_cols=72  Identities=10%  Similarity=0.012  Sum_probs=48.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .++.+.       ..+|+|||+|+.....       ..+...+.+|+.|+.++++.+.+..
T Consensus        60 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  133 (255)
T PRK07523         60 SAHALAFDVTDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHM  133 (255)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4788999999853      344433       2479999999975321       1234567899999999998876531


Q ss_pred             ---ccchhhcccccC
Q psy3446          81 ---QLKLFLRLKTEV   92 (166)
Q Consensus        81 ---~~~~~~~~ss~~   92 (166)
                         ....++++|+..
T Consensus       134 ~~~~~g~iv~iss~~  148 (255)
T PRK07523        134 IARGAGKIINIASVQ  148 (255)
T ss_pred             HHhCCeEEEEEccch
Confidence               234566766643

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.23  E-value=0.02  Score=43.90  Aligned_cols=60  Identities=18%  Similarity=0.272  Sum_probs=41.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchH-----HHHH-----HHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE-----KIQL-----AVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~-----~~~~-----~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++..+.+|+..      ...++++..++|+|||+|+......     +...     ....|+.|+.++++.|.+.+
T Consensus        59 ~~~~~~~Dl~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~  128 (353)
T PLN02896         59 RLRLFRADLQE------EGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK  128 (353)
T ss_pred             eEEEEECCCCC------HHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC
Confidence            45667788743      3456777778999999999754322     2332     33456799999999997753

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.017  Score=42.16  Aligned_cols=76  Identities=18%  Similarity=0.102  Sum_probs=48.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH----hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL----RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~----~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---   79 (166)
                      .++.++.+|++++.- + ...+...    ..++|+|||+|+.....       ..+...+.+|+.|+..+.+.+...   
T Consensus        48 ~~~~~~~~D~~~~~~-v-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  125 (260)
T PRK08267         48 GNAWTGALDVTDRAA-W-DAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA  125 (260)
T ss_pred             CceEEEEecCCCHHH-H-HHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            368899999998531 1 1111222    23579999999975321       234567899999999998877542   


Q ss_pred             hccchhhccccc
Q psy3446          80 RQLKLFLRLKTE   91 (166)
Q Consensus        80 ~~~~~~~~~ss~   91 (166)
                      .....++++||.
T Consensus       126 ~~~~~iv~isS~  137 (260)
T PRK08267        126 TPGARVINTSSA  137 (260)
T ss_pred             CCCCEEEEeCch
Confidence            123445666664

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.028  Score=40.47  Aligned_cols=73  Identities=14%  Similarity=0.109  Sum_probs=48.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc----h---hhHHHHHHhhhhcHHHHHHHHH-H
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF----D---EKIQLAVAINVLGVRAMLELAR-E   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~----~---~~~~~~~~~nv~gt~~ll~l~~-~   78 (166)
                      .++.++.+|++++.      .+..+.       ..+|.|||+|+....    .   ..+...+.+|+.|+..+++.+. .
T Consensus        59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  132 (249)
T PRK12827         59 GKALGLAFDVRDFA------ATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP  132 (249)
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            36889999999863      233222       358999999997541    1   2234578899999999999887 2


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .....++.+||..
T Consensus       133 ~~~~~~~~~iv~~sS~~  149 (249)
T PRK12827        133 MIRARRGGRIVNIASVA  149 (249)
T ss_pred             HHhcCCCeEEEEECCch
Confidence            1   2234566666643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=96.16  E-value=0.023  Score=44.02  Aligned_cols=103  Identities=17%  Similarity=0.017  Sum_probs=58.9

Q ss_pred             CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc-CccceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          41 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE-VPHFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~-~~~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      .--.|+-+||++++|.++...+..+  |           ..+..+.+.... ..........+.+|+.      +...+.
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G-----------~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~------d~~~~~   80 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAE--G-----------HYIIASDWKKNEHMSEDMFCHEFHLVDLR------VMENCL   80 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhC--C-----------CEEEEEEeccccccccccccceEEECCCC------CHHHHH
Confidence            3456888999999998875544221  1           111111111100 0000011234556753      233456


Q ss_pred             HHhccccEEEEcccccc---ch-HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTNVNVIFHGAATVR---FD-EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~---~~-~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .+..++|+|||+|+...   +. .........|+.|+.++++.|++.
T Consensus        81 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~  127 (370)
T PLN02695         81 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN  127 (370)
T ss_pred             HHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh
Confidence            66678999999998642   11 123345678999999999999875

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.022  Score=42.52  Aligned_cols=73  Identities=16%  Similarity=0.082  Sum_probs=49.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....        ..+...+++|+.|+.++++.+...
T Consensus        97 ~~~~~~~Dl~~~~------~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~  170 (290)
T PRK06701         97 KCLLIPGDVSDEA------FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPH  170 (290)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            5789999999853      233322       3589999999964321        123457889999999999887653


Q ss_pred             -hccchhhcccccCc
Q psy3446          80 -RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 -~~~~~~~~~ss~~~   93 (166)
                       .....++++|+...
T Consensus       171 ~~~~g~iV~isS~~~  185 (290)
T PRK06701        171 LKQGSAIINTGSITG  185 (290)
T ss_pred             HhhCCeEEEEecccc
Confidence             22235677776543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.15  E-value=0.019  Score=41.53  Aligned_cols=73  Identities=21%  Similarity=0.165  Sum_probs=48.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....        ..+...+.+|+.|+..+.+.+...
T Consensus        54 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  127 (251)
T PRK07231         54 RAIAVAADVSDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPA  127 (251)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            5789999999853      344333       2579999999874322        223457889999988887766542


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .....++.+|+...
T Consensus       128 ~~~~~~~~iv~~sS~~~  144 (251)
T PRK07231        128 MRGEGGGAIVNVASTAG  144 (251)
T ss_pred             HHhcCCcEEEEEcChhh
Confidence               22345667776543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.14  E-value=0.029  Score=40.28  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|.|||+|+.....       ..+...+.+|+.++..+++.+...
T Consensus        55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  128 (248)
T PRK05557         55 GKALAVQGDVSDAE------SVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP  128 (248)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46889999999853      232222       3689999999875321       223456789999999998887653


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +..+++++|+.
T Consensus       129 ~~~~~~~~~v~iss~  143 (248)
T PRK05557        129 MMKQRSGRIINISSV  143 (248)
T ss_pred             HHhcCCeEEEEEccc
Confidence            2   22456677664

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.12  E-value=0.032  Score=40.29  Aligned_cols=74  Identities=18%  Similarity=0.168  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc----h---hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF----D---EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~----~---~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ..+.+.       ..+|+|||+|+....    .   ..+...+++|+.++.++.+.+...
T Consensus        52 ~~~~~~~~d~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (250)
T TIGR03206        52 GNAQAFACDITDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG  125 (250)
T ss_pred             CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            36889999999853      233332       358999999986421    1   122446889999999988876532


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++++...
T Consensus       126 ~~~~~~~~ii~iss~~~  142 (250)
T TIGR03206       126 MVERGAGRIVNIASDAA  142 (250)
T ss_pred             HHhcCCeEEEEECchhh
Confidence               12345667766543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.12  E-value=0.013  Score=39.53  Aligned_cols=70  Identities=21%  Similarity=0.293  Sum_probs=46.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+..+.       ..+|.|||+|+.....       ..+...+++|+.|+..+++.+... 
T Consensus        54 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-  126 (180)
T smart00822       54 EVTVVACDVADRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-  126 (180)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-
Confidence            5778999998853      233332       3479999999964321       233557889999999999888652 


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      +...++.+++.
T Consensus       127 ~~~~ii~~ss~  137 (180)
T smart00822      127 PLDFFVLFSSV  137 (180)
T ss_pred             CcceEEEEccH
Confidence            33445555553

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.024  Score=40.45  Aligned_cols=73  Identities=12%  Similarity=0.003  Sum_probs=48.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIRQLK   83 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~~~~   83 (166)
                      .+++++.+|++++.      ++..+.+   .+|++||+|+.....       ..+...+++|+.++.++.++... .+..
T Consensus        45 ~~~~~~~~Dl~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g  117 (230)
T PRK07041         45 APVRTAALDITDEA------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGG  117 (230)
T ss_pred             CceEEEEccCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCe
Confidence            46889999999853      3454444   479999999874321       23355788999999998884433 3334


Q ss_pred             hhhcccccCc
Q psy3446          84 LFLRLKTEVP   93 (166)
Q Consensus        84 ~~~~~ss~~~   93 (166)
                      .++++++...
T Consensus       118 ~iv~~ss~~~  127 (230)
T PRK07041        118 SLTFVSGFAA  127 (230)
T ss_pred             EEEEECchhh
Confidence            5666665443

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.032  Score=40.37  Aligned_cols=72  Identities=19%  Similarity=0.119  Sum_probs=46.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .++++.       .++|+|||+|+.....       ..+...+.+|+.|+.++.+.+...
T Consensus        53 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  126 (252)
T PRK06138         53 GRAFARQGDVGSAE------AVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPI  126 (252)
T ss_pred             CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            35789999999853      233332       3689999999975321       123446889999998777655431


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++++|+.
T Consensus       127 ~~~~~~~~ii~~sS~  141 (252)
T PRK06138        127 MQRQGGGSIVNTASQ  141 (252)
T ss_pred             HHhcCCeEEEEECCh
Confidence               223456666664

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.07  E-value=0.034  Score=40.35  Aligned_cols=73  Identities=15%  Similarity=0.110  Sum_probs=46.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec--------chhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~--------~~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       .++|.|||+|+...        ....+...+++|+.|+..+...+..
T Consensus        46 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (248)
T PRK10538         46 DNLYIAQLDVRNRA------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_pred             cceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            36889999999853      233222       36899999998632        1123355788999998777766543


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...++.+|+..
T Consensus       120 ~~~~~~~~~iv~isS~~  136 (248)
T PRK10538        120 GMVERNHGHIINIGSTA  136 (248)
T ss_pred             HHHhcCCcEEEEECCcc
Confidence            2   2234566676643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.06  E-value=0.035  Score=40.43  Aligned_cols=71  Identities=8%  Similarity=0.108  Sum_probs=46.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+++|+.|+..+++.+....
T Consensus        54 ~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  127 (259)
T PRK12384         54 MAYGFGADATSEQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLM  127 (259)
T ss_pred             eeEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            5889999999853      232222       3579999999865321       2335577899999988877665421


Q ss_pred             ---c-cchhhccccc
Q psy3446          81 ---Q-LKLFLRLKTE   91 (166)
Q Consensus        81 ---~-~~~~~~~ss~   91 (166)
                         . ...++++|+.
T Consensus       128 ~~~~~~~~iv~~ss~  142 (259)
T PRK12384        128 IRDGIQGRIIQINSK  142 (259)
T ss_pred             HhCCCCcEEEEecCc
Confidence               2 2356666653

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.032  Score=41.20  Aligned_cols=73  Identities=19%  Similarity=0.269  Sum_probs=47.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+.+|+.|+.++.+.+...
T Consensus        59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~  132 (274)
T PRK07775         59 GEAVAFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG  132 (274)
T ss_pred             CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            35788999999853      233322       3579999999975321       223456789999999988776432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .....++++||..
T Consensus       133 ~~~~~~g~iv~isS~~  148 (274)
T PRK07775        133 MIERRRGDLIFVGSDV  148 (274)
T ss_pred             HHhcCCceEEEECChH
Confidence               1223466777654

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.036  Score=40.44  Aligned_cols=72  Identities=17%  Similarity=0.133  Sum_probs=47.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch---h-----hHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD---E-----KIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~---~-----~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+|+.....   .     .+...+++|+.|+..+++.+..
T Consensus        50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  123 (263)
T PRK06181         50 GEALVVPTDVSDAE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP  123 (263)
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            36889999999853      233332       2689999999875422   1     1344688999999999887754


Q ss_pred             Hh--ccchhhccccc
Q psy3446          79 IR--QLKLFLRLKTE   91 (166)
Q Consensus        79 ~~--~~~~~~~~ss~   91 (166)
                      ..  ....++.+|+.
T Consensus       124 ~~~~~~~~iv~~sS~  138 (263)
T PRK06181        124 HLKASRGQIVVVSSL  138 (263)
T ss_pred             HHHhcCCEEEEEecc
Confidence            21  22345555553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.03  E-value=0.031  Score=40.68  Aligned_cols=77  Identities=13%  Similarity=0.049  Sum_probs=47.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---   80 (166)
                      .+++++.+|++++.- + ....+.+   ...+|+|||+|+.....       ..+...+.+|+.|+..+.+.+....   
T Consensus        67 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  144 (256)
T PRK12748         67 VRCEHMEIDLSQPYA-P-NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK  144 (256)
T ss_pred             CeEEEEECCCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Confidence            368999999998531 0 0111222   23589999999875321       2234568899999999988765321   


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      ....++++|+..
T Consensus       145 ~~~~iv~~ss~~  156 (256)
T PRK12748        145 AGGRIINLTSGQ  156 (256)
T ss_pred             CCeEEEEECCcc
Confidence            223566666643

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.03  E-value=0.027  Score=40.79  Aligned_cols=72  Identities=15%  Similarity=0.148  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++++|++++.      .+.++.+       .+|+|||+|+.....       ..+...+++|+.++..+++.+...
T Consensus        48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (252)
T PRK08220         48 YPFATFVLDVSDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ  121 (252)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46889999999853      3444332       479999999975432       234557889999999998877542


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   ....++++|+.
T Consensus       122 ~~~~~~g~iv~~ss~  136 (252)
T PRK08220        122 FRRQRSGAIVTVGSN  136 (252)
T ss_pred             HHhCCCCEEEEECCc
Confidence            2   22346666664

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.02  E-value=0.034  Score=41.81  Aligned_cols=59  Identities=27%  Similarity=0.303  Sum_probs=43.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      .....++++++|+|+|+|+.... .......+..|+.|+.++++.|.+.
T Consensus        44 ~~~~~~~D~~~------~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  103 (328)
T TIGR03466        44 DVEIVEGDLRD------PASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA  103 (328)
T ss_pred             CceEEEeeCCC------HHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            45566777633      34577777889999999986432 2345677889999999999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.025  Score=41.06  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .++++.       ..+|+|||+|+....       ...+...+++|+.|+..+++.+...
T Consensus        47 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  120 (252)
T PRK07856         47 RPAEFHAADVRDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAV  120 (252)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            36889999999853      233333       356999999986421       1223557889999999999877542


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++|+..
T Consensus       121 ~~~~~~~g~ii~isS~~  137 (252)
T PRK07856        121 MQQQPGGGSIVNIGSVS  137 (252)
T ss_pred             HHhcCCCcEEEEEcccc
Confidence            1    123466666643

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.00  E-value=0.036  Score=39.87  Aligned_cols=71  Identities=21%  Similarity=0.290  Sum_probs=47.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+..+.+       .+|+|||+|+.....       ..++..+.+|+.|+..+.+.+....
T Consensus        56 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  129 (247)
T PRK05565         56 DAIAVKADVSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYM  129 (247)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5889999999963      2333222       689999999976321       2235578899999988887765432


Q ss_pred             ---ccchhhccccc
Q psy3446          81 ---QLKLFLRLKTE   91 (166)
Q Consensus        81 ---~~~~~~~~ss~   91 (166)
                         +...++.+|+.
T Consensus       130 ~~~~~~~~v~~sS~  143 (247)
T PRK05565        130 IKRKSGVIVNISSI  143 (247)
T ss_pred             HhcCCcEEEEECCH
Confidence               22346666664

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.025  Score=41.22  Aligned_cols=71  Identities=13%  Similarity=0.099  Sum_probs=45.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc----h----hhHHHHHHhhhhcHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF----D----EKIQLAVAINVLGVRAMLELARE-   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~----~----~~~~~~~~~nv~gt~~ll~l~~~-   78 (166)
                      ++.++.+|++++.      .+.++.       ..+|++||+|+....    .    ..+...+++|+.|+..+.+.... 
T Consensus        51 ~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~  124 (257)
T PRK07024         51 RVSVYAADVRDAD------ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP  124 (257)
T ss_pred             eeEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence            6889999999853      233322       247999999986431    1    23456788999999988774322 


Q ss_pred             H--hccchhhccccc
Q psy3446          79 I--RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~--~~~~~~~~~ss~   91 (166)
                      .  .+...++.++|.
T Consensus       125 ~~~~~~~~iv~isS~  139 (257)
T PRK07024        125 MRAARRGTLVGIASV  139 (257)
T ss_pred             HHhcCCCEEEEEech
Confidence            1  222445666553

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.00  E-value=0.027  Score=42.91  Aligned_cols=59  Identities=17%  Similarity=0.162  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.+      ...++++.+  .+|+|+|+|+.....   ........+|+.|+.++++.|.+.
T Consensus        61 ~~~~~~~Dl~d------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~  124 (340)
T PLN02653         61 RMKLHYGDLSD------ASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH  124 (340)
T ss_pred             ceEEEEecCCC------HHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh
Confidence            35566777633      334555554  369999999975432   223445688999999999999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.039  Score=39.82  Aligned_cols=63  Identities=13%  Similarity=0.125  Sum_probs=42.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHH---HHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRE---LLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~---~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.- + ....+   +...++|+|||+|+.....       ..+...+++|+.|+..+++.+..
T Consensus        52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (249)
T PRK06500         52 ESALVIRADAGDVAA-Q-KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP  124 (249)
T ss_pred             CceEEEEecCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            367889999988531 0 00111   1123689999999975422       23345788999999999988865

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.036  Score=40.22  Aligned_cols=71  Identities=15%  Similarity=0.158  Sum_probs=47.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      ++..+.       ..+|+|||+|+.....       ..+...+.+|+.|+.++++.+... 
T Consensus        62 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  135 (255)
T PRK06841         62 NAKGLVCDVSDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHM  135 (255)
T ss_pred             ceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence            5678999999853      233332       3579999999975432       123457889999999999887643 


Q ss_pred             --hccchhhccccc
Q psy3446          80 --RQLKLFLRLKTE   91 (166)
Q Consensus        80 --~~~~~~~~~ss~   91 (166)
                        .....++++|+.
T Consensus       136 ~~~~~~~iv~~sS~  149 (255)
T PRK06841        136 IAAGGGKIVNLASQ  149 (255)
T ss_pred             HhcCCceEEEEcch
Confidence              123456666664

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.014  Score=43.05  Aligned_cols=75  Identities=12%  Similarity=0.159  Sum_probs=47.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .+++++.+|++++.- + .. ++++   ...+|+|+|+|+....+       ..+...+.+|+.|+..+++.+...   .
T Consensus        54 ~~~~~~~~D~~d~~~-~-~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  130 (280)
T PRK06914         54 QNIKVQQLDVTDQNS-I-HN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ  130 (280)
T ss_pred             CceeEEecCCCCHHH-H-HH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            468999999999631 0 01 2222   23579999999865421       233456789999998888775432   2


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      +...++++|+.
T Consensus       131 ~~~~iv~vsS~  141 (280)
T PRK06914        131 KSGKIINISSI  141 (280)
T ss_pred             CCCEEEEECcc
Confidence            23456666654

>PRK08264 short chain dehydrogenase; Validated

Probab=95.95  E-value=0.043  Score=39.39  Aligned_cols=73  Identities=14%  Similarity=0.205  Sum_probs=48.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHHh--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREIR--   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~~--   80 (166)
                      .++.++.+|++++.      .+.++.+   .+|+|||+|+....        ...+...+++|+.++..+.+.+....  
T Consensus        49 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  122 (238)
T PRK08264         49 PRVVPLQLDVTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA  122 (238)
T ss_pred             CceEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            46889999999853      3444443   58999999997221        12334578899999999988765421  


Q ss_pred             -ccchhhcccccC
Q psy3446          81 -QLKLFLRLKTEV   92 (166)
Q Consensus        81 -~~~~~~~~ss~~   92 (166)
                       +...++.+|+..
T Consensus       123 ~~~~~~v~~sS~~  135 (238)
T PRK08264        123 NGGGAIVNVLSVL  135 (238)
T ss_pred             cCCCEEEEEcChh
Confidence             234466666643

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.027  Score=41.74  Aligned_cols=71  Identities=15%  Similarity=0.111  Sum_probs=46.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      ++..+.       ..+|+|||+|+....+       ..+...+++|+.|+.++.+.+....
T Consensus        56 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m  129 (275)
T PRK05876         56 DVHGVMCDVRHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRL  129 (275)
T ss_pred             eEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            5788999999953      333332       2579999999974321       2234567899999999888765321


Q ss_pred             ---c-cchhhccccc
Q psy3446          81 ---Q-LKLFLRLKTE   91 (166)
Q Consensus        81 ---~-~~~~~~~ss~   91 (166)
                         + ...++++||.
T Consensus       130 ~~~~~~g~iv~isS~  144 (275)
T PRK05876        130 LEQGTGGHVVFTASF  144 (275)
T ss_pred             HhcCCCCEEEEeCCh
Confidence               1 2346666664

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.035  Score=40.49  Aligned_cols=59  Identities=10%  Similarity=0.143  Sum_probs=41.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+....       ...+...+++|+.|+..+.+.+..
T Consensus        59 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (258)
T PRK09134         59 RRAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR  131 (258)
T ss_pred             CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            36889999999853      233222       357999999986422       123456789999999998887665

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.88  E-value=0.045  Score=39.91  Aligned_cols=73  Identities=18%  Similarity=0.308  Sum_probs=47.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ....+.+       .+|++||+|+....       ...++..+.+|+.|...+.+.+...
T Consensus        63 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  136 (258)
T PRK06935         63 RKVTFVQVDLTKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV  136 (258)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            46889999999853      2333332       68999999997532       1233557889999988777665432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++|+..
T Consensus       137 ~~~~~~g~iv~isS~~  152 (258)
T PRK06935        137 MAKQGSGKIINIASML  152 (258)
T ss_pred             HHhcCCeEEEEECCHH
Confidence               1223456666643

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.042  Score=39.00  Aligned_cols=72  Identities=11%  Similarity=0.172  Sum_probs=44.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH--hcc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI--RQL   82 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~--~~~   82 (166)
                      .++++.+|++++      +.+.++.+   ++|.|||+++.....       ..+...+.+|+.+...+.+.+.+.  ...
T Consensus        48 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  121 (227)
T PRK08219         48 GATPFPVDLTDP------EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH  121 (227)
T ss_pred             cceEEecCCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            578999999985      34555554   589999999975421       123445778888855544433221  112


Q ss_pred             chhhcccccC
Q psy3446          83 KLFLRLKTEV   92 (166)
Q Consensus        83 ~~~~~~ss~~   92 (166)
                      ..++++|+..
T Consensus       122 ~~~v~~ss~~  131 (227)
T PRK08219        122 GHVVFINSGA  131 (227)
T ss_pred             CeEEEEcchH
Confidence            3466666654

>PRK07060 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.035  Score=39.93  Aligned_cols=72  Identities=10%  Similarity=0.050  Sum_probs=47.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHhc---
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIRQ---   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~~---   81 (166)
                      ++.++.+|++++.      .+..+.   ..+|+|||+|+.....       ..+...+.+|+.|+..+++.+.....   
T Consensus        54 ~~~~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  127 (245)
T PRK07060         54 GCEPLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAG  127 (245)
T ss_pred             CCeEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            3678899998853      233333   3589999999975432       23345677999999999887765321   


Q ss_pred             -cchhhcccccC
Q psy3446          82 -LKLFLRLKTEV   92 (166)
Q Consensus        82 -~~~~~~~ss~~   92 (166)
                       ...++++|+..
T Consensus       128 ~~~~iv~~sS~~  139 (245)
T PRK07060        128 RGGSIVNVSSQA  139 (245)
T ss_pred             CCcEEEEEccHH
Confidence             13566666643

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=95.87  E-value=0.021  Score=42.63  Aligned_cols=48  Identities=15%  Similarity=-0.013  Sum_probs=35.4

Q ss_pred             HHhHHHHhc--cccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         115 ETDRELLRT--NVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       115 ~~~~~~l~~--~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ....+++.+  ++|+|||+|+....    ......++..|+.|+.++++.|++.
T Consensus        38 ~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~   91 (306)
T PLN02725         38 QADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH   91 (306)
T ss_pred             HHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc
Confidence            344555544  47999999986432    2345567889999999999999875

>PRK05693 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.032  Score=41.13  Aligned_cols=71  Identities=17%  Similarity=0.150  Sum_probs=45.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      +++++.+|++++.      .++.+.       .++|+|||+|+....+       ..+...+++|+.|+..+.+.+....
T Consensus        45 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  118 (274)
T PRK05693         45 GFTAVQLDVNDGA------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLL  118 (274)
T ss_pred             CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4678899999853      233322       3689999999975432       2345578899999988888764321


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ....++.+|+.
T Consensus       119 ~~~~g~iv~isS~  131 (274)
T PRK05693        119 RRSRGLVVNIGSV  131 (274)
T ss_pred             hhcCCEEEEECCc
Confidence              12334555553

>PLN02686 cinnamoyl-CoA reductase

Probab=95.86  E-value=0.025  Score=43.82  Aligned_cols=59  Identities=12%  Similarity=0.063  Sum_probs=42.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      .....++.+++|.|+|+|+..+...   ........|+.|+.++++.|++.
T Consensus       108 ~~~~v~~Dl~d------~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~  169 (367)
T PLN02686        108 GIWTVMANLTE------PESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT  169 (367)
T ss_pred             ceEEEEcCCCC------HHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence            35567788643      3446677778999999998754221   12345678999999999999875

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.05  Score=39.23  Aligned_cols=72  Identities=17%  Similarity=0.197  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+|+.....       ..+...+.+|+.|+.++.+.+...
T Consensus        56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  129 (250)
T PRK12939         56 GRAHAIAADLADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH  129 (250)
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            36889999999853      233332       3689999999975321       233456789999999988876542


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...++++|+.
T Consensus       130 ~~~~~~g~iv~isS~  144 (250)
T PRK12939        130 LRDSGRGRIVNLASD  144 (250)
T ss_pred             HHHcCCeEEEEECch
Confidence            1   12356666664

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.049  Score=39.52  Aligned_cols=72  Identities=15%  Similarity=0.103  Sum_probs=46.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQLK   83 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~~~   83 (166)
                      ++.++.+|++++      +.+..+.. ++|+|||+|+....+       ..+...+.+|+.|+..+.+.+...   .+..
T Consensus        52 ~~~~~~~D~~~~------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  125 (257)
T PRK09291         52 ALRVEKLDLTDA------IDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG  125 (257)
T ss_pred             cceEEEeeCCCH------HHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence            588999999985      23444444 799999999965321       223456788999887766543321   2234


Q ss_pred             hhhcccccC
Q psy3446          84 LFLRLKTEV   92 (166)
Q Consensus        84 ~~~~~ss~~   92 (166)
                      .++++||..
T Consensus       126 ~iv~~SS~~  134 (257)
T PRK09291        126 KVVFTSSMA  134 (257)
T ss_pred             eEEEEcChh
Confidence            577777643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.84  E-value=0.034  Score=39.90  Aligned_cols=76  Identities=13%  Similarity=0.114  Sum_probs=47.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++.- + ...++.+   ...+|.|||+||.....       ..+...++.|+.+..++.+.+...   .
T Consensus        54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  131 (246)
T PRK05653         54 GEARVLVFDVSDEAA-V-RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA  131 (246)
T ss_pred             CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            368899999998631 0 1111111   23579999999875432       123456788999999888777532   2


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      +...++.+|+.
T Consensus       132 ~~~~ii~~ss~  142 (246)
T PRK05653        132 RYGRIVNISSV  142 (246)
T ss_pred             CCcEEEEECcH
Confidence            33466667664

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.83  E-value=0.04  Score=37.23  Aligned_cols=72  Identities=14%  Similarity=0.197  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++++|++++.      ..+.+.       ..+|++||+|+....       ...+...+++|+.+...+.+.+.. 
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-  124 (167)
T PF00106_consen   52 AKITFIECDLSDPE------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-  124 (167)
T ss_dssp             SEEEEEESETTSHH------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-
T ss_pred             cccccccccccccc------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-
Confidence            57999999999853      333332       368999999998651       123356889999999999888776 


Q ss_pred             hccchhhcccccC
Q psy3446          80 RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ~~~~~~~~~ss~~   92 (166)
                      .+...++.+|+..
T Consensus       125 ~~~g~iv~~sS~~  137 (167)
T PF00106_consen  125 QGGGKIVNISSIA  137 (167)
T ss_dssp             HTTEEEEEEEEGG
T ss_pred             ccccceEEecchh
Confidence            4445566666643

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.81  E-value=0.054  Score=39.95  Aligned_cols=73  Identities=16%  Similarity=0.157  Sum_probs=46.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc----------------------hhhHHHHHHhh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF----------------------DEKIQLAVAIN   65 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~----------------------~~~~~~~~~~n   65 (166)
                      ++.++.+|++++.      .+..+       ...+|++||+|+....                      ...+...+++|
T Consensus        60 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  133 (278)
T PRK08277         60 EALAVKADVLDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLN  133 (278)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhh
Confidence            5789999999853      23322       2368999999995422                      12345578899


Q ss_pred             hhcHHHHHHHHHHH---hccchhhcccccCc
Q psy3446          66 VLGVRAMLELAREI---RQLKLFLRLKTEVP   93 (166)
Q Consensus        66 v~gt~~ll~l~~~~---~~~~~~~~~ss~~~   93 (166)
                      +.++..+...+...   .+...++++||...
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277        134 LLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence            99988776654332   12245667766543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.81  E-value=0.048  Score=39.33  Aligned_cols=72  Identities=13%  Similarity=0.111  Sum_probs=46.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++..+.+|+++..      .+..+       ..++|+|||+|+....       ...+...+.+|+.|+..+.+.+... 
T Consensus        54 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  127 (246)
T PRK12938         54 DFIASEGNVGDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGM  127 (246)
T ss_pred             cEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5778899999853      23322       2368999999997431       1234557889999988776655432 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .....++++||..
T Consensus       128 ~~~~~~~iv~isS~~  142 (246)
T PRK12938        128 VERGWGRIINISSVN  142 (246)
T ss_pred             HHcCCeEEEEEechh
Confidence              1223566676643

>PRK08643 acetoin reductase; Validated

Probab=95.80  E-value=0.055  Score=39.33  Aligned_cols=63  Identities=27%  Similarity=0.226  Sum_probs=40.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.- + ...+.++   ..++|+|||+|+....       ...+...+.+|+.|+..+.+.+..
T Consensus        51 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (256)
T PRK08643         51 GKAIAVKADVSDRDQ-V-FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE  123 (256)
T ss_pred             CeEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            367889999999641 0 0112222   2368999999986432       123355788999998877766554

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.064  Score=40.55  Aligned_cols=72  Identities=17%  Similarity=0.106  Sum_probs=46.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch------hhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD------EKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~------~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ++.++.+|++++.      ..+.+.       ..+|++||+||.....      ..++..+.+|+.|...+...+...- 
T Consensus        66 ~v~~~~~Dl~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~  139 (313)
T PRK05854         66 KLSLRALDLSSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLR  139 (313)
T ss_pred             ceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            6889999999853      233332       3489999999975421      2345578899999887776654321 


Q ss_pred             -ccchhhcccccC
Q psy3446          81 -QLKLFLRLKTEV   92 (166)
Q Consensus        81 -~~~~~~~~ss~~   92 (166)
                       ...+++.+||..
T Consensus       140 ~~~~riv~vsS~~  152 (313)
T PRK05854        140 AGRARVTSQSSIA  152 (313)
T ss_pred             hCCCCeEEEechh
Confidence             123566666653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.79  E-value=0.044  Score=39.90  Aligned_cols=72  Identities=14%  Similarity=0.155  Sum_probs=45.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .+..+.       .++|+|||+|+....       ...+...+++|+.|+..+...+... 
T Consensus        52 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  125 (255)
T PRK06463         52 GVFTIKCDVGNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL  125 (255)
T ss_pred             CCeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence            4788999999853      233332       358999999987432       1223457889999976665443221 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       126 ~~~~~g~iv~isS~~  140 (255)
T PRK06463        126 KLSKNGAIVNIASNA  140 (255)
T ss_pred             HhcCCcEEEEEcCHH
Confidence              1234566777654

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.046  Score=40.22  Aligned_cols=73  Identities=15%  Similarity=0.095  Sum_probs=46.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      ....+.+       .+|+|||+|+....        ...+...+.+|+.|+..+++.+.+
T Consensus        58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (276)
T PRK05875         58 GAVRYEPADVTDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR  131 (276)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            46889999999853      2333322       68999999985421        112345678899999988876543


Q ss_pred             Hh---ccchhhcccccC
Q psy3446          79 IR---QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~~~~~~~~ss~~   92 (166)
                      ..   ....++++|+..
T Consensus       132 ~~~~~~~g~iv~~sS~~  148 (276)
T PRK05875        132 ELVRGGGGSFVGISSIA  148 (276)
T ss_pred             HHHhcCCcEEEEEechh
Confidence            21   123566666643

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.056  Score=39.45  Aligned_cols=72  Identities=18%  Similarity=0.272  Sum_probs=46.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +++.+.       ..+|+|||+|+.....       ..+...+.+|+.|+..+++.+...
T Consensus        54 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (263)
T PRK08226         54 HRCTAVVADVRDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE  127 (263)
T ss_pred             CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            35788999999853      233332       3579999999974322       123446889999999888876542


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .....++.+|+.
T Consensus       128 ~~~~~~~~iv~isS~  142 (263)
T PRK08226        128 MIARKDGRIVMMSSV  142 (263)
T ss_pred             HHhcCCcEEEEECcH
Confidence               122346666654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.73  E-value=0.038  Score=41.60  Aligned_cols=59  Identities=25%  Similarity=0.324  Sum_probs=42.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      ....+.      ..+|++||+|+....       ...+...+.+|+.|+.++.+.+..
T Consensus        62 ~~~~~~~~Dv~d~~------~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  133 (306)
T PRK07792         62 AKAVAVAGDISQRA------TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA  133 (306)
T ss_pred             CeEEEEeCCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            36889999999853      233332      368999999997542       123455788999999998887653

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.051  Score=39.63  Aligned_cols=73  Identities=15%  Similarity=0.131  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ++..+.       ..+|++||+|+.....       ..+...+++|+.|+..+.+.+...
T Consensus        58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  131 (260)
T PRK07063         58 ARVLAVPADVTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG  131 (260)
T ss_pred             ceEEEEEccCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            35889999999853      233332       3689999999964322       233557889999998888765432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .....++++||..
T Consensus       132 ~~~~~~g~iv~isS~~  147 (260)
T PRK07063        132 MVERGRGSIVNIASTH  147 (260)
T ss_pred             HHhhCCeEEEEECChh
Confidence               1223566666643

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.059  Score=40.34  Aligned_cols=71  Identities=14%  Similarity=0.093  Sum_probs=45.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .+..+.+       .+|+|||+||.....         ..+...+.+|+.|+..+.+.+..
T Consensus        90 ~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  163 (293)
T PRK05866         90 DAMAVPCDLSDLD------AVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAP  163 (293)
T ss_pred             cEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5788999999853      2333333       689999999875321         22345788999998887765432


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .+...++++||.
T Consensus       164 ~~~~~~~g~iv~isS~  179 (293)
T PRK05866        164 GMLERGDGHIINVATW  179 (293)
T ss_pred             HHHhcCCcEEEEECCh
Confidence            1   122345666653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.68  E-value=0.045  Score=39.81  Aligned_cols=72  Identities=15%  Similarity=0.142  Sum_probs=47.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc---h---hhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF---D---EKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~---~---~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ++.++.+|++++.      ....+       ...+|+|||+|+....   .   ..+...+.+|+.|+.++++.+.... 
T Consensus        61 ~~~~~~~D~~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  134 (255)
T PRK06113         61 QAFACRCDITSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEME  134 (255)
T ss_pred             cEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            5788999999853      22222       2357999999996432   2   2334568899999999998876421 


Q ss_pred             --ccchhhcccccC
Q psy3446          81 --QLKLFLRLKTEV   92 (166)
Q Consensus        81 --~~~~~~~~ss~~   92 (166)
                        ....++++|+..
T Consensus       135 ~~~~~~iv~isS~~  148 (255)
T PRK06113        135 KNGGGVILTITSMA  148 (255)
T ss_pred             hcCCcEEEEEeccc
Confidence              123566666643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.67  E-value=0.034  Score=40.15  Aligned_cols=60  Identities=18%  Similarity=0.184  Sum_probs=38.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++.++.+|++++.- + ...++.+   ...+|+|||+|+.....        ..+...+.+|+.|+..+...
T Consensus        52 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  122 (248)
T PRK06947         52 GRACVVAGDVANEAD-V-IAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE  122 (248)
T ss_pred             CcEEEEEeccCCHHH-H-HHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHH
Confidence            368899999998631 0 0111222   23689999999964321        12244688999999887643

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=95.67  E-value=0.091  Score=43.07  Aligned_cols=59  Identities=14%  Similarity=0.123  Sum_probs=42.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch-HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~-~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ...+.+.+.++|+|||+++..... ......+.+|+.|+.++++.|.+.
T Consensus       139 ~v~iV~gDLtD------~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a  198 (576)
T PLN03209        139 KLEIVECDLEK------PDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA  198 (576)
T ss_pred             ceEEEEecCCC------HHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh
Confidence            46678888743      345666778899999999864311 123456778999999999999765

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.066  Score=38.67  Aligned_cols=75  Identities=15%  Similarity=0.019  Sum_probs=46.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQ   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~   81 (166)
                      ++.++.+|++++.- + ...++.+   ...+|+|||+|+.....       ..+...+++|+.|+..+.+.+...   .+
T Consensus        54 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  131 (248)
T PRK08251         54 KVAVAALDVNDHDQ-V-FEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG  131 (248)
T ss_pred             eEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            68899999998631 0 0111111   23689999999865321       222456789999998888766432   22


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++.+||.
T Consensus       132 ~~~iv~~sS~  141 (248)
T PRK08251        132 SGHLVLISSV  141 (248)
T ss_pred             CCeEEEEecc
Confidence            3456666664

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.064  Score=39.01  Aligned_cols=73  Identities=8%  Similarity=0.063  Sum_probs=47.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec---ch---hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR---FD---EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~---~~---~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+...   +.   ..+...+.+|+.+...+.+.+....
T Consensus        55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  128 (258)
T PRK08628         55 PRAEFVQVDLTDDA------QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHL  128 (258)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            36889999999853      233332       35899999999532   11   3345578899999988887765421


Q ss_pred             --ccchhhcccccC
Q psy3446          81 --QLKLFLRLKTEV   92 (166)
Q Consensus        81 --~~~~~~~~ss~~   92 (166)
                        ....++++|+..
T Consensus       129 ~~~~~~iv~~ss~~  142 (258)
T PRK08628        129 KASRGAIVNISSKT  142 (258)
T ss_pred             hccCcEEEEECCHH
Confidence              123466666643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.59  E-value=0.057  Score=39.22  Aligned_cols=71  Identities=15%  Similarity=0.126  Sum_probs=46.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .++.+.       ..+|+|||+|+....       ...+...+++|+.|+..+.+.+....
T Consensus        59 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  132 (254)
T PRK08085         59 KAHAAPFNVTHKQ------EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYM  132 (254)
T ss_pred             eEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            5778999999964      233322       348999999996432       22345578899999988887665421


Q ss_pred             ---ccchhhccccc
Q psy3446          81 ---QLKLFLRLKTE   91 (166)
Q Consensus        81 ---~~~~~~~~ss~   91 (166)
                         +...++++|+.
T Consensus       133 ~~~~~~~iv~isS~  146 (254)
T PRK08085        133 VKRQAGKIINICSM  146 (254)
T ss_pred             HHcCCcEEEEEccc
Confidence               22356666654

>PRK12743 oxidoreductase; Provisional

Probab=95.59  E-value=0.054  Score=39.48  Aligned_cols=76  Identities=11%  Similarity=0.040  Sum_probs=47.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh-c-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR-Q-   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~-~-   81 (166)
                      .++.++.+|++++.- + ....+++   ...+|+|||+|+.....       ..+...+.+|+.|...+.+.+.... . 
T Consensus        52 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  129 (256)
T PRK12743         52 VRAEIRQLDLSDLPE-G-AQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ  129 (256)
T ss_pred             CceEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            368899999998531 0 0111222   23589999999975321       2335578899999999988776532 1 


Q ss_pred             --cchhhccccc
Q psy3446          82 --LKLFLRLKTE   91 (166)
Q Consensus        82 --~~~~~~~ss~   91 (166)
                        ...++.+|+.
T Consensus       130 ~~~g~ii~isS~  141 (256)
T PRK12743        130 GQGGRIINITSV  141 (256)
T ss_pred             CCCeEEEEEeec
Confidence              1346666654

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.048  Score=40.27  Aligned_cols=59  Identities=15%  Similarity=0.221  Sum_probs=42.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+||.....       ..+...+++|+.|+.++.+.+..
T Consensus        62 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  134 (273)
T PRK08278         62 GQALPLVGDVRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP  134 (273)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence            35789999999963      233322       3689999999975421       22345788999999999998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.57  E-value=0.047  Score=39.94  Aligned_cols=73  Identities=16%  Similarity=0.125  Sum_probs=47.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc----------------hhhHHHHHHhhhhcHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF----------------DEKIQLAVAINVLGVR   70 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~----------------~~~~~~~~~~nv~gt~   70 (166)
                      .++.++.+|++++.      .++.+.       ..+|+|||+|+....                ...+...+.+|+.|+.
T Consensus        49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  122 (266)
T PRK06171         49 ENYQFVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF  122 (266)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence            36788999999853      233332       357999999996421                1223457889999999


Q ss_pred             HHHHHHHHHh---ccchhhcccccC
Q psy3446          71 AMLELAREIR---QLKLFLRLKTEV   92 (166)
Q Consensus        71 ~ll~l~~~~~---~~~~~~~~ss~~   92 (166)
                      .+.+.+....   +...++++|+..
T Consensus       123 ~l~~~~~~~~~~~~~g~iv~isS~~  147 (266)
T PRK06171        123 LMSQAVARQMVKQHDGVIVNMSSEA  147 (266)
T ss_pred             HHHHHHHHHHHhcCCcEEEEEcccc
Confidence            9988776532   122466666643

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.045  Score=39.18  Aligned_cols=74  Identities=11%  Similarity=0.014  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHHHHh---cc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELAREIR---QL   82 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~~~~---~~   82 (166)
                      .++.++.+|++++ +    +...+....+|+|||+|+...    +    ...+...+.+|+.|+.++.+.+....   +.
T Consensus        45 ~~~~~~~~D~~~~-~----~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  119 (235)
T PRK06550         45 GNFHFLQLDLSDD-L----EPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS  119 (235)
T ss_pred             CcEEEEECChHHH-H----HHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            4688999999886 1    222333457899999998531    1    12335578899999999988775421   22


Q ss_pred             chhhcccccC
Q psy3446          83 KLFLRLKTEV   92 (166)
Q Consensus        83 ~~~~~~ss~~   92 (166)
                      ..++++|+..
T Consensus       120 ~~iv~~sS~~  129 (235)
T PRK06550        120 GIIINMCSIA  129 (235)
T ss_pred             cEEEEEcChh
Confidence            3566666654

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.061  Score=39.06  Aligned_cols=59  Identities=22%  Similarity=0.216  Sum_probs=41.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       ..+|++||+|+.....       ..+...+.+|+.|+..+.+.+..
T Consensus        58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (253)
T PRK05867         58 GKVVPVCCDVSQHQ------QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK  130 (253)
T ss_pred             CeEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence            36788999999853      233322       3689999999975422       12345678999999988887654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.54  E-value=0.064  Score=39.31  Aligned_cols=71  Identities=7%  Similarity=0.092  Sum_probs=46.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++.      .++.+.       ..+|+|||+||....       ...+...+.+|+.|...+...+... 
T Consensus        60 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  133 (265)
T PRK07097         60 EAHGYVCDVTDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSM  133 (265)
T ss_pred             ceEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            6889999999853      233332       348999999997542       1223457789999998887765432 


Q ss_pred             --hccchhhccccc
Q psy3446          80 --RQLKLFLRLKTE   91 (166)
Q Consensus        80 --~~~~~~~~~ss~   91 (166)
                        .....++++|+.
T Consensus       134 ~~~~~g~iv~isS~  147 (265)
T PRK07097        134 IKKGHGKIINICSM  147 (265)
T ss_pred             HhcCCcEEEEEcCc
Confidence              123456666654

>PRK06196 oxidoreductase; Provisional

Probab=95.53  E-value=0.057  Score=40.77  Aligned_cols=72  Identities=14%  Similarity=0.140  Sum_probs=46.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-----hhhHHHHHHhhhhcHHHHHHHHHHH---
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----DEKIQLAVAINVLGVRAMLELAREI---   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-----~~~~~~~~~~nv~gt~~ll~l~~~~---   79 (166)
                      ++.++.+|++++.      .++.+.       .++|+|||+||....     ...++..+.+|+.|+..+.+.+...   
T Consensus        72 ~v~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~  145 (315)
T PRK06196         72 GVEVVMLDLADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA  145 (315)
T ss_pred             hCeEEEccCCCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            4789999999853      233332       358999999996432     1234557889999987766654322   


Q ss_pred             hccchhhcccccC
Q psy3446          80 RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ~~~~~~~~~ss~~   92 (166)
                      ....+++++||..
T Consensus       146 ~~~~~iV~vSS~~  158 (315)
T PRK06196        146 GAGARVVALSSAG  158 (315)
T ss_pred             cCCCeEEEECCHH
Confidence            1224577777653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.53  E-value=0.063  Score=38.60  Aligned_cols=77  Identities=10%  Similarity=0.068  Sum_probs=47.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHH----HHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELA----REI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~----~~~   79 (166)
                      .++.++.+|++++.- + ....+.+   ...+|+|||+|+....       ...+...+++|+.|+.++...+    ++ 
T Consensus        52 ~~~~~~~~D~~~~~~-v-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-  128 (245)
T PRK12824         52 DQVRLKELDVTDTEE-C-AEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-  128 (245)
T ss_pred             CeEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-
Confidence            368899999999531 0 0111222   2358999999986531       1223457889999988875543    33 


Q ss_pred             hccchhhcccccCc
Q psy3446          80 RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~~~~~~~~ss~~~   93 (166)
                      .....++++|+...
T Consensus       129 ~~~~~iv~iss~~~  142 (245)
T PRK12824        129 QGYGRIINISSVNG  142 (245)
T ss_pred             hCCeEEEEECChhh
Confidence            23346777776543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.52  E-value=0.046  Score=39.81  Aligned_cols=73  Identities=11%  Similarity=0.157  Sum_probs=48.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +++.+.       ..+|+++|+|+....       ...+...+.+|+.|+..+.+.+...
T Consensus        55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  128 (251)
T PRK12481         55 RKFHFITADLIQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQ  128 (251)
T ss_pred             CeEEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHH
Confidence            46889999999953      333332       358999999997532       1334567889999998888766542


Q ss_pred             h-c---cchhhcccccC
Q psy3446          80 R-Q---LKLFLRLKTEV   92 (166)
Q Consensus        80 ~-~---~~~~~~~ss~~   92 (166)
                      . .   ...+++++|..
T Consensus       129 ~~~~~~~g~ii~isS~~  145 (251)
T PRK12481        129 FVKQGNGGKIINIASML  145 (251)
T ss_pred             HHHcCCCCEEEEeCChh
Confidence            1 1   13466666643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.51  E-value=0.061  Score=38.88  Aligned_cols=73  Identities=14%  Similarity=0.048  Sum_probs=47.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecchh-------hHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFDE-------KIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~~-------~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      ....+       ...+|+|||+||......       .+...+.+|+.|+..+.+.+.+..
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  130 (252)
T PRK06077         57 EGIGVLADVSTRE------GCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM  130 (252)
T ss_pred             eeEEEEeccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh
Confidence            5678899999864      22222       236899999999643211       124568899999999888776532


Q ss_pred             -ccchhhcccccCc
Q psy3446          81 -QLKLFLRLKTEVP   93 (166)
Q Consensus        81 -~~~~~~~~ss~~~   93 (166)
                       ....+++++|...
T Consensus       131 ~~~~~iv~~sS~~~  144 (252)
T PRK06077        131 REGGAIVNIASVAG  144 (252)
T ss_pred             hcCcEEEEEcchhc
Confidence             2235666666543

>KOG1205|consensus

Probab=95.49  E-value=0.044  Score=40.85  Aligned_cols=76  Identities=17%  Similarity=0.060  Sum_probs=49.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHH---HHhcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHhc---
Q psy3446          15 KISAVAGDVSLPGLGLSETDRE---LLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIRQ---   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~---~~~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~~---   81 (166)
                      ++.++++|+++.+--  +..++   .-..++|+.++.||....       .......+++|+.|+.++..++-....   
T Consensus        64 ~v~~~~~Dvs~~~~~--~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~  141 (282)
T KOG1205|consen   64 KVLVLQLDVSDEESV--KKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN  141 (282)
T ss_pred             ccEEEeCccCCHHHH--HHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC
Confidence            699999999996421  11111   234579999999998651       112245789999999999887754322   


Q ss_pred             cchhhcccccC
Q psy3446          82 LKLFLRLKTEV   92 (166)
Q Consensus        82 ~~~~~~~ss~~   92 (166)
                      .-.++.+||..
T Consensus       142 ~GhIVvisSia  152 (282)
T KOG1205|consen  142 DGHIVVISSIA  152 (282)
T ss_pred             CCeEEEEeccc
Confidence            13456666654

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.067  Score=39.05  Aligned_cols=56  Identities=18%  Similarity=0.171  Sum_probs=41.8

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.+|+++.      +++.....++|++||+||.....    ..+...+++|+.|+.++.+.+..
T Consensus        61 ~~~~~D~~~~------~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  120 (245)
T PRK12367         61 EWIKWECGKE------ESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED  120 (245)
T ss_pred             eEEEeeCCCH------HHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5678899874      34555667899999999975332    23456789999999999987654

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.068  Score=38.91  Aligned_cols=58  Identities=22%  Similarity=0.256  Sum_probs=41.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .+..+       ..++|.|||+|+....        ...+...+++|+.|+.++.+.+..
T Consensus        59 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  131 (264)
T PRK12829         59 KVTATVADVADPA------QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVP  131 (264)
T ss_pred             ceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5689999999854      23222       2468999999997611        123356788999999998887643

>PRK05855 short chain dehydrogenase; Validated

Probab=95.47  E-value=0.048  Score=44.34  Aligned_cols=73  Identities=15%  Similarity=0.060  Sum_probs=48.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+..+.+       .+|++||+||....+       ..+...+++|+.|+.++.+.+....
T Consensus       365 ~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  438 (582)
T PRK05855        365 VAHAYRVDVSDAD------AMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQM  438 (582)
T ss_pred             eEEEEEcCCCCHH------HHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5789999999963      2333322       489999999985422       2345578899999998887654321


Q ss_pred             ---c-cchhhcccccCc
Q psy3446          81 ---Q-LKLFLRLKTEVP   93 (166)
Q Consensus        81 ---~-~~~~~~~ss~~~   93 (166)
                         + ...++++||...
T Consensus       439 ~~~~~~g~iv~~sS~~~  455 (582)
T PRK05855        439 VERGTGGHIVNVASAAA  455 (582)
T ss_pred             HhcCCCcEEEEECChhh
Confidence               1 135677777543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.43  E-value=0.047  Score=40.38  Aligned_cols=49  Identities=20%  Similarity=0.192  Sum_probs=36.1

Q ss_pred             HHhHHHHhccc--cEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         115 ETDRELLRTNV--NVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       115 ~~~~~~l~~~~--d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ...+.++.++.  |+|||+|+......   .....+.+|+.|+.++++.|++.+
T Consensus        39 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~   92 (287)
T TIGR01214        39 PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG   92 (287)
T ss_pred             HHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            44566666554  99999998654322   345578899999999999998753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.061  Score=38.69  Aligned_cols=77  Identities=17%  Similarity=0.098  Sum_probs=47.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++.- + ...++.+   ...+|+|||+|+.....       ..+...+.+|+.|+.++.+.+...   .
T Consensus        55 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  132 (241)
T PRK07454         55 VKAAAYSIDLSNPEA-I-APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR  132 (241)
T ss_pred             CcEEEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence            368899999998631 0 0111222   13589999999864321       233556889999998887765432   1


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      +...++.+|+..
T Consensus       133 ~~~~iv~isS~~  144 (241)
T PRK07454        133 GGGLIINVSSIA  144 (241)
T ss_pred             CCcEEEEEccHH
Confidence            223466666654

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.076  Score=40.59  Aligned_cols=73  Identities=16%  Similarity=0.157  Sum_probs=45.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +++.+.       ..+|++||+|+...+.       ..+...+++|+.|..++...+...
T Consensus        57 ~~~~~v~~Dv~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~  130 (334)
T PRK07109         57 GEALAVVADVADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRH  130 (334)
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            36789999999953      333332       3689999999975332       123456788888877665544332


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       131 ~~~~~~g~iV~isS~~  146 (334)
T PRK07109        131 MRPRDRGAIIQVGSAL  146 (334)
T ss_pred             HHhcCCcEEEEeCChh
Confidence               1234577777654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.40  E-value=0.055  Score=41.45  Aligned_cols=59  Identities=25%  Similarity=0.296  Sum_probs=40.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      +...+.++.++  +|+|+|+|+.....   ........+|+.|+.++++.|++.
T Consensus        53 ~~~~~~~Dl~------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~  116 (349)
T TIGR02622        53 KIEDHFGDIR------DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI  116 (349)
T ss_pred             CceEEEccCC------CHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc
Confidence            3445667763      33445666554  69999999853221   234557789999999999999764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.085  Score=38.76  Aligned_cols=72  Identities=17%  Similarity=0.107  Sum_probs=45.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+....+       ..++..+.+|+.|+..+...+...
T Consensus        49 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (270)
T PRK05650         49 GDGFYQRCDVRDYS------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL  122 (270)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            36888999999853      233332       3689999999975422       223446789998888766654321


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++.+|+.
T Consensus       123 ~~~~~~~~iv~vsS~  137 (270)
T PRK05650        123 FKRQKSGRIVNIASM  137 (270)
T ss_pred             HHhCCCCEEEEECCh
Confidence               223456666654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.35  E-value=0.072  Score=38.19  Aligned_cols=77  Identities=16%  Similarity=0.100  Sum_probs=45.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++.- + ...++.+   ...+|+|||+|+....       ...+...+.+|+.++..+.+.+...   .
T Consensus        50 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  127 (242)
T TIGR01829        50 FDFRVVEGDVSSFES-C-KAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER  127 (242)
T ss_pred             CceEEEEecCCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            368899999998531 0 0111111   2458999999986531       1233456788999987765544321   2


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      +...++++|+..
T Consensus       128 ~~~~iv~iss~~  139 (242)
T TIGR01829       128 GWGRIINISSVN  139 (242)
T ss_pred             CCcEEEEEcchh
Confidence            234566777643

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.058  Score=39.25  Aligned_cols=73  Identities=15%  Similarity=0.142  Sum_probs=46.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+       ...+|+|||+|+.....       ..+...+++|+.|+..+.+.+...
T Consensus        58 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (254)
T PRK06114         58 RRAIQIAADVTSKA------DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA  131 (254)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence            36788999999864      23322       23479999999975421       233557889999998877765432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++|+..
T Consensus       132 ~~~~~~~~iv~isS~~  147 (254)
T PRK06114        132 MLENGGGSIVNIASMS  147 (254)
T ss_pred             HHhcCCcEEEEECchh
Confidence               1223556666543

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.054  Score=39.32  Aligned_cols=73  Identities=12%  Similarity=0.091  Sum_probs=47.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .++.+.       ..+|+|||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        50 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  123 (252)
T PRK07677         50 GQVLTVQMDVRNPE------DVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY  123 (252)
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence            46889999999853      233322       358999999985321       1123557899999999998877542


Q ss_pred             --h-c-cchhhcccccC
Q psy3446          80 --R-Q-LKLFLRLKTEV   92 (166)
Q Consensus        80 --~-~-~~~~~~~ss~~   92 (166)
                        . . ...++++|+.+
T Consensus       124 ~~~~~~~g~ii~isS~~  140 (252)
T PRK07677        124 WIEKGIKGNIINMVATY  140 (252)
T ss_pred             HHhcCCCEEEEEEcChh
Confidence              1 1 23566666654

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.079  Score=38.19  Aligned_cols=77  Identities=12%  Similarity=-0.001  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---ccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---QLK   83 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---~~~   83 (166)
                      .+++++++|++++.- + ....+.+..++|.|+|+|+.....       ..+...+++|+.|+.++++.+....   +..
T Consensus        51 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  128 (243)
T PRK07102         51 VAVSTHELDILDTAS-H-AAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG  128 (243)
T ss_pred             CeEEEEecCCCChHH-H-HHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC
Confidence            368999999998631 0 111222333579999999864321       1223467899999999988765431   234


Q ss_pred             hhhcccccC
Q psy3446          84 LFLRLKTEV   92 (166)
Q Consensus        84 ~~~~~ss~~   92 (166)
                      .++++|+..
T Consensus       129 ~iv~~sS~~  137 (243)
T PRK07102        129 TIVGISSVA  137 (243)
T ss_pred             EEEEEeccc
Confidence            566776653

>PRK07985 oxidoreductase; Provisional

Probab=95.28  E-value=0.071  Score=39.89  Aligned_cols=76  Identities=16%  Similarity=0.084  Sum_probs=47.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHHHHh-cc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELAREIR-QL   82 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~~~~-~~   82 (166)
                      ++.++.+|++++.- + ...++.+   ...+|+++|+|+...    +    ...+...+++|+.|+..+++.+.... ..
T Consensus       101 ~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~  178 (294)
T PRK07985        101 KAVLLPGDLSDEKF-A-RSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG  178 (294)
T ss_pred             eEEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC
Confidence            57789999998531 0 0111122   235799999998632    1    12335578999999999988776532 22


Q ss_pred             chhhcccccC
Q psy3446          83 KLFLRLKTEV   92 (166)
Q Consensus        83 ~~~~~~ss~~   92 (166)
                      ..++++||..
T Consensus       179 g~iv~iSS~~  188 (294)
T PRK07985        179 ASIITTSSIQ  188 (294)
T ss_pred             CEEEEECCch
Confidence            3566666654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=95.28  E-value=0.038  Score=41.32  Aligned_cols=49  Identities=24%  Similarity=0.230  Sum_probs=31.3

Q ss_pred             CHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         114 SETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       114 s~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +.....++..  ..|+||||||..+..   .....++.+|+.++.++.++|.+.
T Consensus        39 d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~   92 (286)
T PF04321_consen   39 DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER   92 (286)
T ss_dssp             SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc
Confidence            3445555544  479999999976543   356779999999999999999864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.071  Score=38.71  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .++.+.       .++|+|||+|+...-        ...+...+.+|+.|+..+.+.+..
T Consensus        54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (258)
T PRK07890         54 RRALAVPTDITDED------QCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP  127 (258)
T ss_pred             CceEEEecCCCCHH------HHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            35789999999853      232222       368999999986321        123355788999999999988765


Q ss_pred             Hh--ccchhhcccccC
Q psy3446          79 IR--QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~--~~~~~~~~ss~~   92 (166)
                      ..  ....++++|+..
T Consensus       128 ~~~~~~~~ii~~sS~~  143 (258)
T PRK07890        128 ALAESGGSIVMINSMV  143 (258)
T ss_pred             HHHhCCCEEEEEechh
Confidence            32  123566666643

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.22  E-value=0.11  Score=37.79  Aligned_cols=73  Identities=21%  Similarity=0.098  Sum_probs=45.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      ..+.+.       ..+|++||+|+.....        ..+...+.+|+.|...+.+.+..
T Consensus        55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  128 (254)
T PRK07478         55 GEAVALAGDVRDEA------YAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP  128 (254)
T ss_pred             CcEEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            36789999999853      233332       2689999999964211        12355788999988877665433


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...++++||..
T Consensus       129 ~l~~~~~~~iv~~sS~~  145 (254)
T PRK07478        129 AMLARGGGSLIFTSTFV  145 (254)
T ss_pred             HHHhcCCceEEEEechH
Confidence            1   1223466666643

>TIGR02415 23BDH acetoin reductases

Probab=95.22  E-value=0.073  Score=38.55  Aligned_cols=72  Identities=18%  Similarity=0.087  Sum_probs=45.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+....       ...+...+.+|+.|+..++..+...
T Consensus        49 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (254)
T TIGR02415        49 GKAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ  122 (254)
T ss_pred             CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            35889999999853      233322       357999999987432       1233457889999998877665432


Q ss_pred             h----ccchhhccccc
Q psy3446          80 R----QLKLFLRLKTE   91 (166)
Q Consensus        80 ~----~~~~~~~~ss~   91 (166)
                      .    ....++++|+.
T Consensus       123 ~~~~~~~~~iv~~sS~  138 (254)
T TIGR02415       123 FKKQGHGGKIINAASI  138 (254)
T ss_pred             HHhCCCCeEEEEecch
Confidence            1    11345555553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.08  Score=38.76  Aligned_cols=72  Identities=14%  Similarity=0.120  Sum_probs=46.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec---c---hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR---F---DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~---~---~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++.      .+.++.       ..+|++||+|+...   +   ...+...+++|+.|+..+.+.+....
T Consensus        52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  125 (261)
T PRK08265         52 ERARFIATDITDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHL  125 (261)
T ss_pred             CeeEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence            36889999999853      233332       35799999998642   1   22345578899999998887665422


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ....++++||.
T Consensus       126 ~~~~g~ii~isS~  138 (261)
T PRK08265        126 ARGGGAIVNFTSI  138 (261)
T ss_pred             hcCCcEEEEECch
Confidence              22345555554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.20  E-value=0.11  Score=37.65  Aligned_cols=75  Identities=11%  Similarity=0.046  Sum_probs=46.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHH-------HhcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDREL-------LRTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~-------~~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|+++.+    +.+..+       ....+|+|||+|+....        ...+...+++|+.|+.++++.+..
T Consensus        62 ~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  137 (247)
T PRK08945         62 PQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP  137 (247)
T ss_pred             CCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence            35778889987432    122222       22368999999986432        123456788999999888876643


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...++++|+..
T Consensus       138 ~l~~~~~~~iv~~ss~~  154 (247)
T PRK08945        138 LLLKSPAASLVFTSSSV  154 (247)
T ss_pred             HHHhCCCCEEEEEccHh
Confidence            2   2334566666643

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.19  E-value=0.088  Score=38.05  Aligned_cols=71  Identities=14%  Similarity=0.112  Sum_probs=45.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------C-ccEEEEcceeec---------c----hhhHHHHHHhhhhcHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------N-VNVIFHGAATVR---------F----DEKIQLAVAINVLGVRAM   72 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~-~d~Vih~aa~~~---------~----~~~~~~~~~~nv~gt~~l   72 (166)
                      .++.++.+|++++.      .+..+.+       . +|++||+|+...         +    ...+...+++|+.|+.++
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  125 (253)
T PRK08642         52 DRAIALQADVTDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT  125 (253)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence            46889999999853      2333322       2 899999997521         1    122345688999999999


Q ss_pred             HHHHHHH---hccchhhcccc
Q psy3446          73 LELAREI---RQLKLFLRLKT   90 (166)
Q Consensus        73 l~l~~~~---~~~~~~~~~ss   90 (166)
                      ++.+...   .....++++++
T Consensus       126 ~~~~~~~~~~~~~g~iv~iss  146 (253)
T PRK08642        126 IQAALPGMREQGFGRIINIGT  146 (253)
T ss_pred             HHHHHHHHHhcCCeEEEEECC
Confidence            8877542   12234555555

>PLN02240 UDP-glucose 4-epimerase

Probab=95.18  E-value=0.087  Score=40.21  Aligned_cols=59  Identities=17%  Similarity=0.121  Sum_probs=41.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      +..++.+..  .+|+|+|+|+.....   ......+..|+.|+.+++++|.+.
T Consensus        59 ~~~~~~~D~~~------~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (352)
T PLN02240         59 NLVFHKVDLRD------KEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH  122 (352)
T ss_pred             cceEEecCcCC------HHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            34566777643      334555543  589999999864322   234567899999999999999774

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.16  E-value=0.1  Score=41.16  Aligned_cols=58  Identities=14%  Similarity=0.156  Sum_probs=43.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++..+.+|++++      +...+...++|++||+||....+    ..+...+++|+.|+.++.+.+..
T Consensus       225 ~v~~v~~Dvsd~------~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        225 PVKTLHWQVGQE------AALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CeEEEEeeCCCH------HHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367888999884      34566677899999999865322    23456789999999999887654

>PRK12742 oxidoreductase; Provisional

Probab=95.11  E-value=0.11  Score=37.29  Aligned_cols=94  Identities=13%  Similarity=0.060  Sum_probs=55.5

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH-Hhccch
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE-IRQLKL   84 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~-~~~~~~   84 (166)
                      +.++.+|++++.      .+.++.   ..+|++||+|+.....       ..+...+.+|+.|+..+...+.. ......
T Consensus        53 ~~~~~~D~~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~  126 (237)
T PRK12742         53 ATAVQTDSADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGR  126 (237)
T ss_pred             CeEEecCCCCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCe
Confidence            577889998853      233332   3589999999875322       23355788999999888654443 223345


Q ss_pred             hhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          85 FLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        85 ~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ++++++.....    .+.+   ....|+.++...+.++
T Consensus       127 iv~isS~~~~~----~~~~---~~~~Y~~sKaa~~~~~  157 (237)
T PRK12742        127 IIIIGSVNGDR----MPVA---GMAAYAASKSALQGMA  157 (237)
T ss_pred             EEEEecccccc----CCCC---CCcchHHhHHHHHHHH
Confidence            66666644311    1111   1245677776665543

>PRK07069 short chain dehydrogenase; Validated

Probab=95.08  E-value=0.064  Score=38.74  Aligned_cols=71  Identities=21%  Similarity=0.235  Sum_probs=43.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecchh-------hHHHHHHhhhh----cHHHHHHHHH
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFDE-------KIQLAVAINVL----GVRAMLELAR   77 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~~-------~~~~~~~~nv~----gt~~ll~l~~   77 (166)
                      +.++.+|++++.      .+..+.       ..+|+|||+|+......       .+...+.+|+.    +++.++..++
T Consensus        53 ~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  126 (251)
T PRK07069         53 AFAAVQDVTDEA------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLR  126 (251)
T ss_pred             EEEEEeecCCHH------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            446889999853      233222       35799999999764321       22446778888    5555555555


Q ss_pred             HHhccchhhcccccCc
Q psy3446          78 EIRQLKLFLRLKTEVP   93 (166)
Q Consensus        78 ~~~~~~~~~~~ss~~~   93 (166)
                      +. +...++++|+...
T Consensus       127 ~~-~~~~ii~~ss~~~  141 (251)
T PRK07069        127 AS-QPASIVNISSVAA  141 (251)
T ss_pred             hc-CCcEEEEecChhh
Confidence            42 2345666766543

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.087  Score=38.50  Aligned_cols=59  Identities=20%  Similarity=0.264  Sum_probs=42.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+      ...+|+|||+|+.....       ..+...+++|+.|+.++++.+..
T Consensus        53 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  124 (263)
T PRK09072         53 GRHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP  124 (263)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            47889999999853      23322      24589999999975432       23345788999999999887754

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=95.07  E-value=0.065  Score=40.13  Aligned_cols=41  Identities=17%  Similarity=0.179  Sum_probs=32.1

Q ss_pred             ccccEEEEccccccch-HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         123 TNVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++|+|+|+|+..... .+....+.+|+.|+.++++.|.+.+
T Consensus        65 ~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~  106 (314)
T TIGR02197        65 GKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG  106 (314)
T ss_pred             CCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhC
Confidence            4799999999864332 2345678899999999999998753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09242 tropinone reductase; Provisional

Probab=95.07  E-value=0.091  Score=38.22  Aligned_cols=77  Identities=9%  Similarity=0.102  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++.- + ...++.+   ...+|+|||+|+....       ...+...+.+|+.|+..+.+.+...   .
T Consensus        60 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  137 (257)
T PRK09242         60 REVHGLAADVSDDED-R-RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH  137 (257)
T ss_pred             CeEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence            368899999998531 0 0111111   2368999999996422       1233557889999999998876532   1


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      ....++++|+..
T Consensus       138 ~~~~ii~~sS~~  149 (257)
T PRK09242        138 ASSAIVNIGSVS  149 (257)
T ss_pred             CCceEEEECccc
Confidence            234566666643

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.088  Score=38.35  Aligned_cols=77  Identities=16%  Similarity=0.124  Sum_probs=46.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc---------hhhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~---------~~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      .++.++.+|++++.- + ....+.+   ...+|+|||+|+....         ...+...+++|+.|+..+.+.+...  
T Consensus        49 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  126 (260)
T PRK06523         49 EGVEFVAADLTTAEG-C-AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI  126 (260)
T ss_pred             CceeEEecCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence            468899999998531 0 0001111   2358999999985321         1234557889999998876654332  


Q ss_pred             -hccchhhcccccC
Q psy3446          80 -RQLKLFLRLKTEV   92 (166)
Q Consensus        80 -~~~~~~~~~ss~~   92 (166)
                       .+...++++||..
T Consensus       127 ~~~~g~ii~isS~~  140 (260)
T PRK06523        127 ARGSGVIIHVTSIQ  140 (260)
T ss_pred             hcCCcEEEEEeccc
Confidence             1223466666643

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.03  E-value=0.095  Score=37.83  Aligned_cols=73  Identities=11%  Similarity=0.125  Sum_probs=47.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+       ..++|+|||+|+.....       ..+...+++|+.++..+.+.+...
T Consensus        52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  125 (248)
T TIGR01832        52 RRFLSLTADLSDIE------AIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKH  125 (248)
T ss_pred             CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            36889999999953      23222       23589999999975321       234557889999999888876532


Q ss_pred             h---c-cchhhcccccC
Q psy3446          80 R---Q-LKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~-~~~~~~~ss~~   92 (166)
                      .   . ...++++|+..
T Consensus       126 ~~~~~~~g~iv~~sS~~  142 (248)
T TIGR01832       126 FLKQGRGGKIINIASML  142 (248)
T ss_pred             HHhcCCCeEEEEEecHH
Confidence            1   1 23566666643

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.1  Score=37.30  Aligned_cols=70  Identities=13%  Similarity=0.049  Sum_probs=44.7

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      +++.+|++++.      .++.+.+      ++|+|||+|+.....       ..+...+.+|+.|+..+.+.+...   .
T Consensus        44 ~~~~~D~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  117 (234)
T PRK07577         44 ELFACDLADIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR  117 (234)
T ss_pred             eEEEeeCCCHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            67889999853      2333222      579999999975432       223456788999988877665432   2


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      +...++++|+..
T Consensus       118 ~~~~iv~~sS~~  129 (234)
T PRK07577        118 EQGRIVNICSRA  129 (234)
T ss_pred             CCcEEEEEcccc
Confidence            234566776653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=95.00  E-value=0.042  Score=41.21  Aligned_cols=40  Identities=18%  Similarity=0.178  Sum_probs=30.3

Q ss_pred             cccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         124 NVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       124 ~~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++|+|||+||.... ..+.......|+.|+.+++++|++.+
T Consensus        68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~  108 (308)
T PRK11150         68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE  108 (308)
T ss_pred             CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC
Confidence            58999999985321 12234568899999999999998753

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.11  Score=38.18  Aligned_cols=72  Identities=19%  Similarity=0.158  Sum_probs=45.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+....       ...+...+.+|+.|+.++...+...
T Consensus        58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  131 (264)
T PRK07576         58 PEGLGVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL  131 (264)
T ss_pred             CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            35688999999853      233332       357999999975321       1233456789999999988776542


Q ss_pred             h--ccchhhccccc
Q psy3446          80 R--QLKLFLRLKTE   91 (166)
Q Consensus        80 ~--~~~~~~~~ss~   91 (166)
                      -  ....++++|+.
T Consensus       132 l~~~~g~iv~iss~  145 (264)
T PRK07576        132 LRRPGASIIQISAP  145 (264)
T ss_pred             HHhCCCEEEEECCh
Confidence            1  11245555553

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.88  E-value=0.14  Score=37.31  Aligned_cols=78  Identities=6%  Similarity=0.037  Sum_probs=45.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHH---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREI---   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~---   79 (166)
                      .++.++.+|++++.- + ...++++   ...+|++||+|+....        ...+...+.+|+.|+..+...+...   
T Consensus        56 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  133 (260)
T PRK12823         56 GEALALTADLETYAG-A-QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA  133 (260)
T ss_pred             CeEEEEEEeCCCHHH-H-HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            357889999998531 0 1111222   2368999999984321        1223456788998887666554432   


Q ss_pred             hccchhhcccccCc
Q psy3446          80 RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~~~~~~~~ss~~~   93 (166)
                      .+...++++||...
T Consensus       134 ~~~g~iv~~sS~~~  147 (260)
T PRK12823        134 QGGGAIVNVSSIAT  147 (260)
T ss_pred             cCCCeEEEEcCccc
Confidence            12345777777543

>PRK05865 hypothetical protein; Provisional

Probab=94.86  E-value=0.12  Score=44.52  Aligned_cols=53  Identities=25%  Similarity=0.177  Sum_probs=39.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ...++++.+++|+|||+|+....      ...+|+.|+.++++.|++.
T Consensus        41 ~v~~v~gDL~D------~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~   93 (854)
T PRK05865         41 SADFIAADIRD------ATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET   93 (854)
T ss_pred             CceEEEeeCCC------HHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc
Confidence            34566777643      34567777889999999985431      4678999999999999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.15  Score=37.01  Aligned_cols=72  Identities=15%  Similarity=0.101  Sum_probs=46.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+.++.       .++|+|||+|+....       ...+...+.+|+.|+.++.+.+....
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  130 (260)
T PRK06198         57 KAVFVQADLSDVE------DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLM  130 (260)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            5788999999853      233322       358999999997532       11224468899999998887765432


Q ss_pred             -c---cchhhcccccC
Q psy3446          81 -Q---LKLFLRLKTEV   92 (166)
Q Consensus        81 -~---~~~~~~~ss~~   92 (166)
                       .   ...++.+|+..
T Consensus       131 ~~~~~~g~iv~~ss~~  146 (260)
T PRK06198        131 RRRKAEGTIVNIGSMS  146 (260)
T ss_pred             HhcCCCCEEEEECCcc
Confidence             1   13466666543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.79  E-value=0.14  Score=36.94  Aligned_cols=62  Identities=19%  Similarity=0.173  Sum_probs=37.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecc----------------hhhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF----------------DEKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~----------------~~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++.- + .+.++.+.   ..+|+|||+|+....                ...+...+.+|+.|+..+..
T Consensus        54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (253)
T PRK08217         54 TEVRGYAANVTDEED-V-EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR  131 (253)
T ss_pred             CceEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            367889999998531 0 11122221   357999999985321                12334467889999987765


Q ss_pred             HHH
Q psy3446          75 LAR   77 (166)
Q Consensus        75 l~~   77 (166)
                      .+.
T Consensus       132 ~~~  134 (253)
T PRK08217        132 EAA  134 (253)
T ss_pred             HHH
Confidence            443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.78  E-value=0.091  Score=36.45  Aligned_cols=71  Identities=20%  Similarity=0.304  Sum_probs=40.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc----hh---hHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF----DE---KIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~----~~---~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +++.++..       .++.|||+|+...-    ..   .+...+...+.|+.++.+.... 
T Consensus        53 ~~v~~~~~Dv~d~------~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-  125 (181)
T PF08659_consen   53 ARVEYVQCDVTDP------EAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-  125 (181)
T ss_dssp             -EEEEEE--TTSH------HHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             CceeeeccCccCH------HHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-
Confidence            3799999999995      34554432       46889999997531    11   2234667788899999888766 


Q ss_pred             hccchhhccccc
Q psy3446          80 RQLKLFLRLKTE   91 (166)
Q Consensus        80 ~~~~~~~~~ss~   91 (166)
                      .....|+.+||.
T Consensus       126 ~~l~~~i~~SSi  137 (181)
T PF08659_consen  126 RPLDFFILFSSI  137 (181)
T ss_dssp             TTTSEEEEEEEH
T ss_pred             CCCCeEEEECCh
Confidence            445556666664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN00015 protochlorophyllide reductase

Probab=94.77  E-value=0.15  Score=38.42  Aligned_cols=74  Identities=15%  Similarity=0.108  Sum_probs=47.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .++.+.       ..+|++||+|+....        ...+...+++|+.|+..+.+.+..
T Consensus        47 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  120 (308)
T PLN00015         47 DSYTVMHLDLASLD------SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLD  120 (308)
T ss_pred             CeEEEEEecCCCHH------HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            36788999999853      233222       357999999987421        123456789999998887765443


Q ss_pred             Hh---c--cchhhcccccCc
Q psy3446          79 IR---Q--LKLFLRLKTEVP   93 (166)
Q Consensus        79 ~~---~--~~~~~~~ss~~~   93 (166)
                      ..   +  ..+++++||...
T Consensus       121 ~l~~~~~~~g~IV~vsS~~~  140 (308)
T PLN00015        121 DLKKSDYPSKRLIIVGSITG  140 (308)
T ss_pred             HHHhCCCCCCEEEEEecccc
Confidence            21   1  235777777543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=94.73  E-value=0.11  Score=37.26  Aligned_cols=62  Identities=10%  Similarity=0.016  Sum_probs=41.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-------------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-------------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-------------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.-   -..+.+....+|+|||+||.....             ..+...+.+|+.|...+...+..
T Consensus        43 ~~~~~~~~Dls~~~~---~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  117 (235)
T PRK09009         43 DNVQWHALDVTDEAE---IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP  117 (235)
T ss_pred             CceEEEEecCCCHHH---HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            468899999998631   111222335789999999986321             12345688899999888776654

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.13  Score=37.32  Aligned_cols=72  Identities=17%  Similarity=0.132  Sum_probs=46.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .+++++.+|++++.      .+..+.+       ++|+|||+|+.....       ..+...+.+|+.|+..+++.+...
T Consensus        49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (257)
T PRK07074         49 ARFVPVACDLTDAA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEG  122 (257)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            36889999999853      2333322       489999999875321       112335678999999888877432


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .....++++|+.
T Consensus       123 ~~~~~~~~iv~~sS~  137 (257)
T PRK07074        123 MLKRSRGAVVNIGSV  137 (257)
T ss_pred             HHHcCCeEEEEEcch
Confidence               123456667664

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.16  Score=35.44  Aligned_cols=68  Identities=16%  Similarity=0.231  Sum_probs=42.9

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh-ccchhh
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR-QLKLFL   86 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~   86 (166)
                      .+.+|++++.      .++.+.+   ++|+|||+|+.....       ..+...+.+|+.|+.++.+.+.... +...++
T Consensus        35 ~~~~D~~~~~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv  108 (199)
T PRK07578         35 DVQVDITDPA------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFT  108 (199)
T ss_pred             ceEecCCChH------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence            4678988853      3444333   689999999964321       1234567899999999888765432 223355


Q ss_pred             ccccc
Q psy3446          87 RLKTE   91 (166)
Q Consensus        87 ~~ss~   91 (166)
                      .+|+.
T Consensus       109 ~iss~  113 (199)
T PRK07578        109 LTSGI  113 (199)
T ss_pred             EEccc
Confidence            55543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.70  E-value=0.061  Score=39.75  Aligned_cols=44  Identities=16%  Similarity=0.064  Sum_probs=33.8

Q ss_pred             HHhccccEEEEccccccch-----HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         120 LLRTNVNVIFHGAATVRFD-----EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~-----~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +...++|+|+|+|+.....     .....++..|+.|+.+++++|++..
T Consensus        53 ~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  101 (292)
T TIGR01777        53 EALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE  101 (292)
T ss_pred             hhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence            3456799999999964421     2345678899999999999998763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.07  Score=38.47  Aligned_cols=73  Identities=19%  Similarity=0.176  Sum_probs=46.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHH-----Hh------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDREL-----LR------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~-----~~------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++.      .++.     +.      ..+|++||+|+.....        ..+...+.+|+.|+..+.+
T Consensus        45 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (243)
T PRK07023         45 ERLAEVELDLSDAA------AAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA  118 (243)
T ss_pred             CeEEEEEeccCCHH------HHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence            36889999999864      2222     11      1478999999975421        2235577899999877766


Q ss_pred             HHHHHh---ccchhhcccccC
Q psy3446          75 LAREIR---QLKLFLRLKTEV   92 (166)
Q Consensus        75 l~~~~~---~~~~~~~~ss~~   92 (166)
                      .+....   ....++++||..
T Consensus       119 ~~~~~~~~~~~~~iv~isS~~  139 (243)
T PRK07023        119 ALAQAASDAAERRILHISSGA  139 (243)
T ss_pred             HHHHHhhccCCCEEEEEeChh
Confidence            554432   223566777643

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.18  Score=36.11  Aligned_cols=70  Identities=14%  Similarity=0.132  Sum_probs=44.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh----cCccEEEEcceeec---------c---hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR----TNVNVIFHGAATVR---------F---DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~----~~~d~Vih~aa~~~---------~---~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      +++++.+|++++.      .++.+.    ..+|++||+|+...         +   ...+...+++|+.|+.++.+.+..
T Consensus        45 ~~~~~~~D~~~~~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  118 (223)
T PRK05884         45 DVDAIVCDNTDPA------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGD  118 (223)
T ss_pred             cCcEEecCCCCHH------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3678899999853      344333    35899999987421         1   123456789999999988887654


Q ss_pred             Hh-ccchhhcccc
Q psy3446          79 IR-QLKLFLRLKT   90 (166)
Q Consensus        79 ~~-~~~~~~~~ss   90 (166)
                      .. ....++.+++
T Consensus       119 ~~~~~g~Iv~isS  131 (223)
T PRK05884        119 HLRSGGSIISVVP  131 (223)
T ss_pred             HhhcCCeEEEEec
Confidence            32 1223444444

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.15  Score=36.71  Aligned_cols=71  Identities=15%  Similarity=0.082  Sum_probs=46.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc----CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh-c
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR-Q   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~----~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~-~   81 (166)
                      .++.++.+|++++.      +++.+.+    .+|.++|+|+.....       ..+...+++|+.|+.++.+.+.... +
T Consensus        46 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  119 (240)
T PRK06101         46 ANIFTLAFDVTDHP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC  119 (240)
T ss_pred             CCCeEEEeeCCCHH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            36889999999853      3444443    368889988754321       1234578999999999998876531 2


Q ss_pred             cchhhcccc
Q psy3446          82 LKLFLRLKT   90 (166)
Q Consensus        82 ~~~~~~~ss   90 (166)
                      ...++.+||
T Consensus       120 ~~~iv~isS  128 (240)
T PRK06101        120 GHRVVIVGS  128 (240)
T ss_pred             CCeEEEEec
Confidence            233555555

>PRK06139 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.17  Score=38.69  Aligned_cols=71  Identities=15%  Similarity=0.210  Sum_probs=45.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +++.+.       ..+|++||+|+....+       ..+...+++|+.|+.++...+...
T Consensus        56 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~  129 (330)
T PRK06139         56 AEVLVVPTDVTDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPI  129 (330)
T ss_pred             CcEEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            35778999999853      344433       3589999999975332       223457889999998877665321


Q ss_pred             ---hccchhhcccc
Q psy3446          80 ---RQLKLFLRLKT   90 (166)
Q Consensus        80 ---~~~~~~~~~ss   90 (166)
                         .....+++++|
T Consensus       130 ~~~~~~g~iV~isS  143 (330)
T PRK06139        130 FKKQGHGIFINMIS  143 (330)
T ss_pred             HHHcCCCEEEEEcC
Confidence               11234555554

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=94.60  E-value=0.15  Score=36.59  Aligned_cols=72  Identities=15%  Similarity=0.088  Sum_probs=45.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH-H
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR-E   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~-~   78 (166)
                      .++.++.+|++++.      +...+.       ..+|.+||+|+....       ...+...+.+|+.|+.++++.+. .
T Consensus        48 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (239)
T TIGR01831        48 GNARLLQFDVADRV------ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP  121 (239)
T ss_pred             CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46889999999963      232222       357999999986431       22345578899999988876542 1


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .....++.+||.
T Consensus       122 ~~~~~~~~~iv~vsS~  137 (239)
T TIGR01831       122 MIRARQGGRIITLASV  137 (239)
T ss_pred             HHhhcCCeEEEEEcch
Confidence            1   122356666664

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=94.58  E-value=0.077  Score=38.79  Aligned_cols=64  Identities=17%  Similarity=0.161  Sum_probs=41.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch------------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD------------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~------------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.- + ...++++   ...+|++||+|+.....            ..+...+++|+.|+..+.+.+..
T Consensus        51 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  128 (262)
T TIGR03325        51 DAVVGVEGDVRSLDD-H-KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP  128 (262)
T ss_pred             CceEEEEeccCCHHH-H-HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence            358889999998531 0 1111222   23689999999853211            12456788999999999888765


Q ss_pred             H
Q psy3446          79 I   79 (166)
Q Consensus        79 ~   79 (166)
                      .
T Consensus       129 ~  129 (262)
T TIGR03325       129 A  129 (262)
T ss_pred             H
Confidence            3

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.15  Score=37.01  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=44.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+.....        ..+...+.+|+.++..+...+..
T Consensus        56 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (253)
T PRK06172         56 GEALFVACDVTRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIP  129 (253)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            36889999999853      233332       3579999999864211        23345678999998776654332


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .....++.+|+.
T Consensus       130 ~~~~~~~~~ii~~sS~  145 (253)
T PRK06172        130 LMLAQGGGAIVNTASV  145 (253)
T ss_pred             HHHhcCCcEEEEECch
Confidence            1   122345555554

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.57  E-value=0.18  Score=36.00  Aligned_cols=72  Identities=8%  Similarity=-0.002  Sum_probs=46.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++++.+|+++..      ++..+.       ..+|+|||+|+....       ...+...+.+|+.|+..+++.+.+. 
T Consensus        55 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  128 (239)
T PRK12828         55 ALRIGGIDLVDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPAL  128 (239)
T ss_pred             CceEEEeecCCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHH
Confidence            4678889998853      233322       368999999986421       1223456789999999988876532 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .....++++|+..
T Consensus       129 ~~~~~~~iv~~sS~~  143 (239)
T PRK12828        129 TASGGGRIVNIGAGA  143 (239)
T ss_pred             HhcCCCEEEEECchH
Confidence              2344567777654

>PRK08339 short chain dehydrogenase; Provisional

Probab=94.57  E-value=0.18  Score=37.08  Aligned_cols=73  Identities=11%  Similarity=0.076  Sum_probs=46.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++.      +.+.+.      ..+|+++|+|+.....       ..+...+.+|+.|...+.+.+... 
T Consensus        58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m  131 (263)
T PRK08339         58 VDVSYIVADLTKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAM  131 (263)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            36889999999963      233332      2589999999864321       234557889988887766544332 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       132 ~~~~~g~Ii~isS~~  146 (263)
T PRK08339        132 ERKGFGRIIYSTSVA  146 (263)
T ss_pred             HHcCCCEEEEEcCcc
Confidence              1223566676654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=94.53  E-value=0.22  Score=36.94  Aligned_cols=62  Identities=18%  Similarity=0.294  Sum_probs=42.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecchhh-------HHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFDEK-------IQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~~~-------~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      +++++..|+++++- + .....++.+   .+|++|++||.+.++..       ..+.+++|+.+...+-.+...
T Consensus        57 ~v~vi~~DLs~~~~-~-~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp  128 (265)
T COG0300          57 EVEVIPADLSDPEA-L-ERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLP  128 (265)
T ss_pred             eEEEEECcCCChhH-H-HHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999752 0 111223333   58999999999876522       245788999998887766544

>PRK08177 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.096  Score=37.37  Aligned_cols=72  Identities=10%  Similarity=0.063  Sum_probs=45.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-----CccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-----~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ..+.+.+     ++|+|||+|+.....         ..+...+.+|+.++..+.+.+...
T Consensus        45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  118 (225)
T PRK08177         45 PGVHIEKLDMNDPA------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ  118 (225)
T ss_pred             cccceEEcCCCCHH------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh
Confidence            35788899999853      2333322     589999999875321         223446778999998888876543


Q ss_pred             hc--cchhhccccc
Q psy3446          80 RQ--LKLFLRLKTE   91 (166)
Q Consensus        80 ~~--~~~~~~~ss~   91 (166)
                      ..  ...+..+|+.
T Consensus       119 ~~~~~~~iv~~ss~  132 (225)
T PRK08177        119 VRPGQGVLAFMSSQ  132 (225)
T ss_pred             hhhcCCEEEEEccC
Confidence            21  1234455553

>KOG2865|consensus

Probab=94.52  E-value=0.06  Score=40.23  Aligned_cols=71  Identities=10%  Similarity=0.051  Sum_probs=54.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..+-+.+-|+.|+      +.++...+..++||++-+.-.--.++ .+.++|+.+...+.+.|++ .++.+|+++|..-
T Consensus       109 GQvl~~~fd~~De------dSIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke-~GVerfIhvS~Lg  179 (391)
T KOG2865|consen  109 GQVLFMKFDLRDE------DSIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKE-AGVERFIHVSCLG  179 (391)
T ss_pred             cceeeeccCCCCH------HHHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHh-hChhheeehhhcc
Confidence            4677788888774      55788888999999998764322332 3567899999999999998 5788899998753

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.17  Score=35.97  Aligned_cols=71  Identities=20%  Similarity=0.143  Sum_probs=46.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hc--CccEEEEcceeecc---------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RT--NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~--~~d~Vih~aa~~~~---------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++++.+|++++.      .++.+   ..  .+|+|||+|+....         ...+...+++|+.|+..+++.+....
T Consensus        45 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  118 (222)
T PRK06953         45 GAEALALDVADPA------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLV  118 (222)
T ss_pred             cceEEEecCCCHH------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhh
Confidence            3578999999964      23332   12  48999999987521         12345678999999999988776521


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ....++++++.
T Consensus       119 ~~~~g~iv~isS~  131 (222)
T PRK06953        119 EAAGGVLAVLSSR  131 (222)
T ss_pred             hccCCeEEEEcCc
Confidence              12235555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.47  E-value=0.14  Score=40.64  Aligned_cols=70  Identities=16%  Similarity=0.200  Sum_probs=46.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ..++.+|++++.      .++.+.       ..+|+|||+|+....       ...+...+.+|+.|+.++.+.+.... 
T Consensus       258 ~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~  331 (450)
T PRK08261        258 GTALALDITAPD------APARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA  331 (450)
T ss_pred             CeEEEEeCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence            467889999853      233222       258999999997532       23345678899999999998876521 


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ....++.+||.
T Consensus       332 ~~~~g~iv~~SS~  344 (450)
T PRK08261        332 LGDGGRIVGVSSI  344 (450)
T ss_pred             hcCCCEEEEECCh
Confidence              12345666654

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.22  Score=36.10  Aligned_cols=76  Identities=11%  Similarity=0.076  Sum_probs=46.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++..+..|+++..- + ....+.+.         ..+|++||+||.....       ..+...+++|+.|+..+.+.+..
T Consensus        55 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  132 (252)
T PRK12747         55 SAFSIGANLESLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS  132 (252)
T ss_pred             ceEEEecccCCHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            46788899988531 1 11112221         1689999999964321       12355778999999998876554


Q ss_pred             H-hccchhhcccccC
Q psy3446          79 I-RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~-~~~~~~~~~ss~~   92 (166)
                      . .+...++++||..
T Consensus       133 ~~~~~g~iv~isS~~  147 (252)
T PRK12747        133 RLRDNSRIINISSAA  147 (252)
T ss_pred             HhhcCCeEEEECCcc
Confidence            3 2223566776654

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=94.47  E-value=0.1  Score=38.17  Aligned_cols=76  Identities=12%  Similarity=0.040  Sum_probs=45.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-----hh-------HHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-----EK-------IQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-----~~-------~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.- + ...++.+   ...+|++||+|+.....     .+       +...+++|+.|+..+.+.+..
T Consensus        52 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T PRK06200         52 DHVLVVEGDVTSYAD-N-QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP  129 (263)
T ss_pred             CcceEEEccCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence            357889999998531 0 1112222   23589999999964321     11       344678899999888877654


Q ss_pred             Hh--ccchhhccccc
Q psy3446          79 IR--QLKLFLRLKTE   91 (166)
Q Consensus        79 ~~--~~~~~~~~ss~   91 (166)
                      ..  ....+++++|.
T Consensus       130 ~~~~~~g~iv~~sS~  144 (263)
T PRK06200        130 ALKASGGSMIFTLSN  144 (263)
T ss_pred             HHHhcCCEEEEECCh
Confidence            32  11235555543

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.46  E-value=0.2  Score=37.06  Aligned_cols=39  Identities=15%  Similarity=0.176  Sum_probs=31.9

Q ss_pred             ccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+......+....+.+|+.|+.++++.+..
T Consensus        75 g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~  113 (275)
T PRK06940         75 GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK  113 (275)
T ss_pred             CCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence            358999999996544556777899999999999888764

>PRK08324 short chain dehydrogenase; Validated

Probab=94.45  E-value=0.16  Score=42.64  Aligned_cols=72  Identities=15%  Similarity=0.097  Sum_probs=47.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       .++|+|||+||.....       ..+...+.+|+.|+..+++.+...
T Consensus       470 ~~v~~v~~Dvtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  543 (681)
T PRK08324        470 DRALGVACDVTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI  543 (681)
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            36889999999853      233332       2689999999964321       223457889999999998776543


Q ss_pred             h---c-cchhhccccc
Q psy3446          80 R---Q-LKLFLRLKTE   91 (166)
Q Consensus        80 ~---~-~~~~~~~ss~   91 (166)
                      .   + ...++.+||.
T Consensus       544 l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        544 MKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHhcCCCcEEEEECCc
Confidence            1   1 1346666664

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=94.43  E-value=0.09  Score=37.81  Aligned_cols=72  Identities=14%  Similarity=0.087  Sum_probs=45.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++.      .+..+.       ..+|+|||+|+.....        ..+...+.+|+.|+..+.+.+...
T Consensus        52 ~~~~~~~D~~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  125 (247)
T PRK09730         52 KAFVLQADISDEN------QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKR  125 (247)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            5788999999963      233332       3578999999864221        123457889999998777654432


Q ss_pred             hc------cchhhcccccC
Q psy3446          80 RQ------LKLFLRLKTEV   92 (166)
Q Consensus        80 ~~------~~~~~~~ss~~   92 (166)
                      ..      ...++++||..
T Consensus       126 ~~~~~~~~~g~~v~~sS~~  144 (247)
T PRK09730        126 MALKHGGSGGAIVNVSSAA  144 (247)
T ss_pred             HHhcCCCCCcEEEEECchh
Confidence            11      13467777653

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.42  E-value=0.13  Score=37.74  Aligned_cols=75  Identities=16%  Similarity=0.137  Sum_probs=46.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQ   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~   81 (166)
                      ++.++.+|++++.- + ...++.+   ...+|++||+|+....+       ..+...+++|+.|+..+...+...   .+
T Consensus        51 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~  128 (273)
T PRK07825         51 LVVGGPLDVTDPAS-F-AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG  128 (273)
T ss_pred             cceEEEccCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            57889999998531 0 0111222   24589999999975422       123457889999998887765432   12


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++.+||.
T Consensus       129 ~g~iv~isS~  138 (273)
T PRK07825        129 RGHVVNVASL  138 (273)
T ss_pred             CCEEEEEcCc
Confidence            2346666664

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=94.32  E-value=0.21  Score=37.90  Aligned_cols=58  Identities=19%  Similarity=0.136  Sum_probs=40.2

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ...+.+|+.+      ...+.+++.  ++|+|+|+|+.....   .........|+.|+.++++.|++.
T Consensus        52 ~~~~~~Dl~d------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (338)
T PRK10675         52 PTFVEGDIRN------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA  114 (338)
T ss_pred             ceEEEccCCC------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            3456677643      234555543  589999999865432   234567889999999999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.29  E-value=0.25  Score=36.99  Aligned_cols=71  Identities=14%  Similarity=0.180  Sum_probs=45.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++..+.+|++++.      +...+       ...+|+|||+|+.....       ..+...+++|+.|+.++.+.+....
T Consensus        58 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~  131 (296)
T PRK05872         58 RVLTVVADVTDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPAL  131 (296)
T ss_pred             cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4666779999853      23222       23589999999975321       2335578899999999888765421


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ....++.+|+.
T Consensus       132 ~~~~g~iv~isS~  144 (296)
T PRK05872        132 IERRGYVLQVSSL  144 (296)
T ss_pred             HHcCCEEEEEeCH
Confidence              22345666654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.26  E-value=0.18  Score=38.18  Aligned_cols=78  Identities=13%  Similarity=0.063  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHHh-c
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREIR-Q   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~~-~   81 (166)
                      .++.++.+|++++.- + ....+.+   ...+|++||+||....        ...+...+.+|+.|...+...+.... .
T Consensus        53 ~~~~~~~~Dl~~~~~-v-~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~  130 (314)
T TIGR01289        53 DSYTIMHLDLGSLDS-V-RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKN  130 (314)
T ss_pred             CeEEEEEcCCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Confidence            357889999998631 0 1111222   2358999999996421        12335578999999888876654321 1


Q ss_pred             ----cchhhcccccCc
Q psy3446          82 ----LKLFLRLKTEVP   93 (166)
Q Consensus        82 ----~~~~~~~ss~~~   93 (166)
                          ..+++.+||...
T Consensus       131 ~~~~~g~IV~vsS~~~  146 (314)
T TIGR01289       131 SPNKDKRLIIVGSITG  146 (314)
T ss_pred             CCCCCCeEEEEecCcc
Confidence                246777777644

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12744 short chain dehydrogenase; Provisional

Probab=94.23  E-value=0.26  Score=35.88  Aligned_cols=58  Identities=16%  Similarity=0.116  Sum_probs=40.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .++++.       .++|++||+|+....       ...+...+++|+.|+..+++.+..
T Consensus        62 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  133 (257)
T PRK12744         62 KAVAFQADLTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             cEEEEecCcCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            6889999999853      233322       358999999997421       112345788999999988887654

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.21  E-value=0.24  Score=36.88  Aligned_cols=61  Identities=18%  Similarity=0.134  Sum_probs=40.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      ++.++.+|++++.- + ...++.+   ...+|++||+|+....       ...+...+++|+.|+..+.+.+.
T Consensus        65 ~~~~~~~Dv~~~~~-v-~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (286)
T PRK07791         65 EAVANGDDIADWDG-A-ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA  135 (286)
T ss_pred             ceEEEeCCCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            57789999998531 0 0111222   2468999999997431       12345578999999988877654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.20  E-value=0.24  Score=36.13  Aligned_cols=72  Identities=19%  Similarity=0.140  Sum_probs=43.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHH---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA---   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~---   76 (166)
                      .++.++.+|++++.      .+..+.       ..+|++||+|+.....       ..+...+.+|+.|+..+...+   
T Consensus        57 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~  130 (261)
T PRK08936         57 GEAIAVKGDVTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKY  130 (261)
T ss_pred             CeEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            35778999999853      233222       3589999999974321       223456889988887655543   


Q ss_pred             -HHHhccchhhccccc
Q psy3446          77 -REIRQLKLFLRLKTE   91 (166)
Q Consensus        77 -~~~~~~~~~~~~ss~   91 (166)
                       .+......++++|+.
T Consensus       131 ~~~~~~~g~iv~~sS~  146 (261)
T PRK08936        131 FVEHDIKGNIINMSSV  146 (261)
T ss_pred             HHhcCCCcEEEEEccc
Confidence             221112345666664

>PRK06949 short chain dehydrogenase; Provisional

Probab=94.17  E-value=0.21  Score=36.22  Aligned_cols=59  Identities=8%  Similarity=0.072  Sum_probs=41.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      ++..+.       ..+|+|||+|+.....       ..+...+.+|+.|+..+.+.+..
T Consensus        58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (258)
T PRK06949         58 GAAHVVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK  130 (258)
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence            36889999999853      233332       2589999999964321       23455788999999988886653

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.02  E-value=0.21  Score=36.48  Aligned_cols=72  Identities=11%  Similarity=0.085  Sum_probs=44.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.      .+..+       ...+|++||+|+.....       ..+...+.+|+.|...+.+.+....
T Consensus        60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  133 (265)
T PRK07062         60 RLLAARCDVLDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLL  133 (265)
T ss_pred             eEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            6788999999953      23222       23579999999964321       1344567889888877666543321


Q ss_pred             ---ccchhhcccccC
Q psy3446          81 ---QLKLFLRLKTEV   92 (166)
Q Consensus        81 ---~~~~~~~~ss~~   92 (166)
                         +...++++|+..
T Consensus       134 ~~~~~g~iv~isS~~  148 (265)
T PRK07062        134 RASAAASIVCVNSLL  148 (265)
T ss_pred             hccCCcEEEEecccc
Confidence               123556666643

>PRK08589 short chain dehydrogenase; Validated

Probab=94.01  E-value=0.2  Score=36.86  Aligned_cols=72  Identities=17%  Similarity=0.136  Sum_probs=45.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      .+..+.       ..+|++||+|+.....        ..+...+.+|+.|+..+.+.+..
T Consensus        54 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (272)
T PRK08589         54 GKAKAYHVDISDEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLP  127 (272)
T ss_pred             CeEEEEEeecCCHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            36889999999853      233222       3579999999875321        12345678899999877766543


Q ss_pred             Hh--ccchhhccccc
Q psy3446          79 IR--QLKLFLRLKTE   91 (166)
Q Consensus        79 ~~--~~~~~~~~ss~   91 (166)
                      ..  ....++++||.
T Consensus       128 ~~~~~~g~iv~isS~  142 (272)
T PRK08589        128 LMMEQGGSIINTSSF  142 (272)
T ss_pred             HHHHcCCEEEEeCch
Confidence            21  11346666654

>PRK12320 hypothetical protein; Provisional

Probab=94.01  E-value=0.19  Score=42.35  Aligned_cols=92  Identities=11%  Similarity=0.105  Sum_probs=54.4

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhcc
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTN  124 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~~  124 (166)
                      |+-+||+++.|.++...+.             .++..+..+++.....  ...++.++.+|+.++       ...++..+
T Consensus         3 ILVTGAaGFIGs~La~~Ll-------------~~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~-------~l~~al~~   60 (699)
T PRK12320          3 ILVTDATGAVGRSVTRQLI-------------AAGHTVSGIAQHPHDA--LDPRVDYVCASLRNP-------VLQELAGE   60 (699)
T ss_pred             EEEECCCCHHHHHHHHHHH-------------hCCCEEEEEeCChhhc--ccCCceEEEccCCCH-------HHHHHhcC
Confidence            6778888888877644221             1111222222211110  112455677886443       24566678


Q ss_pred             ccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         125 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       125 ~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +|+|||+|+... ..    ....|+.|+.+++++|++.+
T Consensus        61 ~D~VIHLAa~~~-~~----~~~vNv~Gt~nLleAA~~~G   94 (699)
T PRK12320         61 ADAVIHLAPVDT-SA----PGGVGITGLAHVANAAARAG   94 (699)
T ss_pred             CCEEEEcCccCc-cc----hhhHHHHHHHHHHHHHHHcC
Confidence            999999998532 11    12479999999999998753

>PRK06484 short chain dehydrogenase; Validated

Probab=93.97  E-value=0.19  Score=40.62  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-----h---hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----D---EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-----~---~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++..+.+|++++.      .+..+.       ..+|++||+|+....     .   ..+...+.+|+.|+.++.+.+..
T Consensus       315 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  388 (520)
T PRK06484        315 DEHLSVQADITDEA------AVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR  388 (520)
T ss_pred             CceeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            35678999999863      233322       358999999997521     1   12355788999999998887665


Q ss_pred             Hh-ccchhhcccccC
Q psy3446          79 IR-QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~-~~~~~~~~ss~~   92 (166)
                      .. +...++++||..
T Consensus       389 ~~~~~g~iv~isS~~  403 (520)
T PRK06484        389 LMSQGGVIVNLGSIA  403 (520)
T ss_pred             HhccCCEEEEECchh
Confidence            32 223566776654

>PLN02583 cinnamoyl-CoA reductase

Probab=93.92  E-value=0.3  Score=36.55  Aligned_cols=59  Identities=10%  Similarity=-0.001  Sum_probs=41.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEcccccc-chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR-FDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~-~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.++      ..+...+.+++.|+|.++... ........+.+|+.|+.++++.|.+.
T Consensus        58 ~~~~~~~Dl~d~------~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~  117 (297)
T PLN02583         58 RLKVFDVDPLDY------HSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT  117 (297)
T ss_pred             ceEEEEecCCCH------HHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            455677887443      345667778999999875432 11224568899999999999999875

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=93.83  E-value=0.28  Score=35.59  Aligned_cols=73  Identities=8%  Similarity=0.069  Sum_probs=47.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      .+..+.       ..+|+|||+|+.....       ..+...+.+|+.|+..+.+.+.+.
T Consensus        60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  133 (256)
T PRK06124         60 GAAEALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQR  133 (256)
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            35889999999853      233222       3569999999974321       223457889999999888766432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .....++++|+..
T Consensus       134 ~~~~~~~~iv~~ss~~  149 (256)
T PRK06124        134 MKRQGYGRIIAITSIA  149 (256)
T ss_pred             HHhcCCcEEEEEeech
Confidence               1234566666643

>KOG1205|consensus

Probab=93.83  E-value=0.12  Score=38.64  Aligned_cols=113  Identities=18%  Similarity=0.122  Sum_probs=62.6

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHH--HHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCH-HhHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVR--AMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSE-TDRE  119 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~--~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~-~~~~  119 (166)
                      .+|+-+||..+.|..+-..+.  -.|.+  .+..+.++...+.  ..+..... .. ++.+++.|+++...-... ....
T Consensus        13 kvVvITGASsGIG~~lA~~la--~~G~~l~lvar~~rrl~~v~--~~l~~~~~-~~-~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELA--KRGAKLVLVARRARRLERVA--EELRKLGS-LE-KVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHH--hCCCceEEeehhhhhHHHHH--HHHHHhCC-cC-ccEEEeCccCCHHHHHHHHHHHH
Confidence            678889999998888732221  12332  1222222221110  11111111 11 688899998764321100 1111


Q ss_pred             HHhccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         120 LLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +-..++|+++|+|+....       .......+.+|+.|+-.+..++..
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp  135 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALP  135 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHH
Confidence            234679999999996431       123555889999999999888764

>PRK07904 short chain dehydrogenase; Provisional

Probab=93.80  E-value=0.32  Score=35.48  Aligned_cols=75  Identities=9%  Similarity=-0.012  Sum_probs=44.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeecchh----h---HHHHHHhhhhcHHHHHH----HHHHHhc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRFDE----K---IQLAVAINVLGVRAMLE----LAREIRQ   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~~~~----~---~~~~~~~nv~gt~~ll~----l~~~~~~   81 (166)
                      +++++.+|++++.- + ....+++.  .++|++||+++......    .   ....+.+|+.|+..+..    ..++ .+
T Consensus        61 ~v~~~~~D~~~~~~-~-~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~-~~  137 (253)
T PRK07904         61 SVEVIDFDALDTDS-H-PKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA-QG  137 (253)
T ss_pred             ceEEEEecCCChHH-H-HHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh-cC
Confidence            68999999998541 0 11123332  36999999888743211    1   12357899998877543    3333 23


Q ss_pred             cchhhcccccC
Q psy3446          82 LKLFLRLKTEV   92 (166)
Q Consensus        82 ~~~~~~~ss~~   92 (166)
                      ...++++||..
T Consensus       138 ~~~iv~isS~~  148 (253)
T PRK07904        138 FGQIIAMSSVA  148 (253)
T ss_pred             CceEEEEechh
Confidence            35677777754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.79  E-value=0.27  Score=35.84  Aligned_cols=77  Identities=12%  Similarity=0.084  Sum_probs=45.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHH-HHHh--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA-REIR--   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~-~~~~--   80 (166)
                      .++.++.+|++++.- + ...+.++.   ..+|+|||+|+.....       ..+...+++|+.|...+...+ +...  
T Consensus        68 ~~~~~~~~D~~~~~~-i-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  145 (256)
T PRK12859         68 VKVSSMELDLTQNDA-P-KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK  145 (256)
T ss_pred             CeEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence            367889999998531 0 11122222   3479999999975321       123456889999988875443 2221  


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      ....++++|+..
T Consensus       146 ~~g~iv~isS~~  157 (256)
T PRK12859        146 SGGRIINMTSGQ  157 (256)
T ss_pred             CCeEEEEEcccc
Confidence            123566776654

>PRK07831 short chain dehydrogenase; Provisional

Probab=93.69  E-value=0.4  Score=34.96  Aligned_cols=58  Identities=17%  Similarity=0.211  Sum_probs=40.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .++.+.       ..+|++||+|+....       ...+...+.+|+.|...+.+.+..
T Consensus        70 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  141 (262)
T PRK07831         70 RVEAVVCDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR  141 (262)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            6889999999853      233332       357999999996421       123445678999999888776553

>PRK06057 short chain dehydrogenase; Provisional

Probab=93.67  E-value=0.3  Score=35.49  Aligned_cols=69  Identities=16%  Similarity=0.075  Sum_probs=43.1

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.+|++++.      .++.+.       .++|+|||+|+.....         ..+...+++|+.|+..+.+.+... 
T Consensus        54 ~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  127 (255)
T PRK06057         54 LFVPTDVTDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM  127 (255)
T ss_pred             cEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence            57889999853      233333       3579999999864321         124567889999998877765431 


Q ss_pred             --hccchhhccccc
Q psy3446          80 --RQLKLFLRLKTE   91 (166)
Q Consensus        80 --~~~~~~~~~ss~   91 (166)
                        .....++.+|+.
T Consensus       128 ~~~~~g~iv~~sS~  141 (255)
T PRK06057        128 VRQGKGSIINTASF  141 (255)
T ss_pred             HHhCCcEEEEEcch
Confidence              122345555553

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=93.65  E-value=0.23  Score=36.17  Aligned_cols=71  Identities=13%  Similarity=0.112  Sum_probs=43.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC-----------ccEEEEcceeecc----------hhhHHHHHHhhhhcHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN-----------VNVIFHGAATVRF----------DEKIQLAVAINVLGVRAML   73 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~-----------~d~Vih~aa~~~~----------~~~~~~~~~~nv~gt~~ll   73 (166)
                      ++.++.+|++++.      +++.+.+.           .+++||+|+....          ...+...+++|+.|+..+.
T Consensus        56 ~v~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~  129 (256)
T TIGR01500        56 RVVRVSLDLGAEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLT  129 (256)
T ss_pred             eEEEEEeccCCHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHH
Confidence            5888999999853      23332211           2589999986321          1234567899999998877


Q ss_pred             HHHHHHhc-----cchhhccccc
Q psy3446          74 ELAREIRQ-----LKLFLRLKTE   91 (166)
Q Consensus        74 ~l~~~~~~-----~~~~~~~ss~   91 (166)
                      +.+.....     ...++++||.
T Consensus       130 ~~~~~~l~~~~~~~~~iv~isS~  152 (256)
T TIGR01500       130 SSVLKAFKDSPGLNRTVVNISSL  152 (256)
T ss_pred             HHHHHHHhhcCCCCCEEEEECCH
Confidence            66543211     1245666654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=93.59  E-value=0.28  Score=36.74  Aligned_cols=59  Identities=19%  Similarity=0.211  Sum_probs=40.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      +...++++.  ++|+|+|+|+......   .....+..|+.|+.++++.|.+.
T Consensus        48 ~~~~~~~D~~~------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  111 (328)
T TIGR01179        48 RVTFVEGDLRD------RELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT  111 (328)
T ss_pred             ceEEEECCCCC------HHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc
Confidence            34456677643      334555543  6899999998653321   33456788999999999998775

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.57  E-value=0.18  Score=39.53  Aligned_cols=57  Identities=19%  Similarity=0.178  Sum_probs=39.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc----cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~----~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      +..++++++    ++|+||||++....  .....+.+|+.|+.++++.|++.
T Consensus       112 ~v~~v~~Dl~d------~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~  172 (390)
T PLN02657        112 GAEVVFGDVTD------ADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV  172 (390)
T ss_pred             CceEEEeeCCC------HHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc
Confidence            45667788744      345666655    58999999875321  12345678999999999999875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=93.56  E-value=0.28  Score=35.18  Aligned_cols=62  Identities=13%  Similarity=0.070  Sum_probs=39.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.- + ....+.+   ...+|++||+|+....       ...+...+.+|+.++..+...+..
T Consensus        47 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  118 (236)
T PRK06483         47 GAQCIQADFSTNAG-I-MAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED  118 (236)
T ss_pred             CCEEEEcCCCCHHH-H-HHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence            36789999998531 0 1112222   2358999999986422       223456788999999877766554

>PLN00106 malate dehydrogenase

Probab=93.26  E-value=0.18  Score=38.56  Aligned_cols=56  Identities=11%  Similarity=-0.006  Sum_probs=42.4

Q ss_pred             HHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          35 RELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        35 ~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      +.+.+.++|+|+|+|+...- +.+..+.+..|...++.+.+.+++.. ...++.++|.
T Consensus        80 ~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSN  136 (323)
T PLN00106         80 LGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISN  136 (323)
T ss_pred             HHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence            45667899999999998654 56677788999999999999888754 3344444443

>PRK07832 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.35  Score=35.56  Aligned_cols=74  Identities=14%  Similarity=0.099  Sum_probs=44.6

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh----c
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR----Q   81 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~----~   81 (166)
                      +.++.+|++++.. + .....++   ...+|+|||+|+....+       ..+...+++|+.|+..+.+.+....    .
T Consensus        52 ~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  129 (272)
T PRK07832         52 PEHRALDISDYDA-V-AAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR  129 (272)
T ss_pred             ceEEEeeCCCHHH-H-HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence            4567899998531 0 0111222   23579999999864321       2235578899999999988765321    1


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++++||.
T Consensus       130 ~g~ii~isS~  139 (272)
T PRK07832        130 GGHLVNVSSA  139 (272)
T ss_pred             CcEEEEEccc
Confidence            2345666654

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.06  E-value=0.54  Score=34.00  Aligned_cols=75  Identities=15%  Similarity=0.135  Sum_probs=44.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      ++.++.+|++++.- + ....+.+   ...+|+|+|+|+....        ...+...+++|+.|...++..+...   .
T Consensus        58 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  135 (252)
T PRK07035         58 KAEALACHIGEMEQ-I-DALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ  135 (252)
T ss_pred             eEEEEEcCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence            47789999998531 0 0111122   2358999999985321        1223457889999998887665432   1


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      ....++++|+.
T Consensus       136 ~~~~iv~~sS~  146 (252)
T PRK07035        136 GGGSIVNVASV  146 (252)
T ss_pred             CCcEEEEECch
Confidence            22345556554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=92.87  E-value=0.3  Score=36.32  Aligned_cols=81  Identities=14%  Similarity=0.054  Sum_probs=47.7

Q ss_pred             CccEEEEcceeecchh----hH-HHHHHhhhhcHHHHHHHHHHHh-ccchhhcccccCccceeeeEeecCCCCCCCCCCC
Q psy3446          41 NVNVIFHGAATVRFDE----KI-QLAVAINVLGVRAMLELAREIR-QLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLS  114 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~~----~~-~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls  114 (166)
                      .+|+|||+|+..=+..    .. +..++.-+..|+.+.++..+.. +.+.++.-|...-|+...-.++.++ +.++.+..
T Consensus        56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~-~~~g~~Fl  134 (297)
T COG1090          56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEE-SPPGDDFL  134 (297)
T ss_pred             CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecC-CCCCCChH
Confidence            6999999999754333    22 3467788999999999988643 3334555444333444443444444 23443332


Q ss_pred             H---HhHHHHh
Q psy3446         115 E---TDRELLR  122 (166)
Q Consensus       115 ~---~~~~~l~  122 (166)
                      .   .+||+.+
T Consensus       135 a~lc~~WE~~a  145 (297)
T COG1090         135 AQLCQDWEEEA  145 (297)
T ss_pred             HHHHHHHHHHH
Confidence            1   3455544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.68  E-value=0.45  Score=35.24  Aligned_cols=73  Identities=22%  Similarity=0.213  Sum_probs=44.2

Q ss_pred             EEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeec-------c----hhhHHHHHHhhhhcHHHHHHHHHHHh-c
Q psy3446          17 SAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVR-------F----DEKIQLAVAINVLGVRAMLELAREIR-Q   81 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~-------~----~~~~~~~~~~nv~gt~~ll~l~~~~~-~   81 (166)
                      .++.+|++++.- + ....+.+   ...+|++||+|+...       +    ...+...+++|+.|...+.+.+.... +
T Consensus        58 ~~~~~Dv~d~~~-v-~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~  135 (274)
T PRK08415         58 YVYELDVSKPEH-F-KSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND  135 (274)
T ss_pred             eEEEecCCCHHH-H-HHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc
Confidence            578999999631 0 1112222   235899999999642       1    12235578999999988877665432 2


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++++|+.
T Consensus       136 ~g~Iv~isS~  145 (274)
T PRK08415        136 GASVLTLSYL  145 (274)
T ss_pred             CCcEEEEecC
Confidence            2345566553

>PRK06484 short chain dehydrogenase; Validated

Probab=92.66  E-value=0.46  Score=38.40  Aligned_cols=71  Identities=18%  Similarity=0.098  Sum_probs=46.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec-----c----hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR-----F----DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~-----~----~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.      .++.+.       ..+|++||+|+...     +    ...+...+++|+.|+..+...+..
T Consensus        52 ~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (520)
T PRK06484         52 DHHALAMDVSDEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR  125 (520)
T ss_pred             ceeEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5678999999863      233322       35899999998621     1    123456789999999988877654


Q ss_pred             Hh---cc-chhhccccc
Q psy3446          79 IR---QL-KLFLRLKTE   91 (166)
Q Consensus        79 ~~---~~-~~~~~~ss~   91 (166)
                      ..   +. ..++++|+.
T Consensus       126 ~~~~~~~g~~iv~isS~  142 (520)
T PRK06484        126 LMIEQGHGAAIVNVASG  142 (520)
T ss_pred             HHHhcCCCCeEEEECCc
Confidence            32   11 245666654

>PRK08017 oxidoreductase; Provisional

Probab=92.53  E-value=0.44  Score=34.50  Aligned_cols=76  Identities=11%  Similarity=0.147  Sum_probs=43.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh----cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR----TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~----~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      +++.+.+|++++.. + ....+.+.    ..+|.|+|+|+.....       ..+...+++|+.|+.++...+.+.   .
T Consensus        46 ~~~~~~~D~~~~~~-~-~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~  123 (256)
T PRK08017         46 GFTGILLDLDDPES-V-ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH  123 (256)
T ss_pred             CCeEEEeecCCHHH-H-HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence            46788999988531 1 01112221    3579999999864321       123457889999988764433221   2


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      +...++.+|+.+
T Consensus       124 ~~~~iv~~ss~~  135 (256)
T PRK08017        124 GEGRIVMTSSVM  135 (256)
T ss_pred             CCCEEEEEcCcc
Confidence            234566666643

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=92.50  E-value=0.4  Score=35.00  Aligned_cols=76  Identities=16%  Similarity=0.054  Sum_probs=49.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHH---HHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRE---LLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~---~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---   80 (166)
                      .++.++.-|++|+.- + +..++   +-..++|+++|.||.....       ..+...+++|+.|..+....+....   
T Consensus        53 ~~~~~~~~DVtD~~~-~-~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r  130 (246)
T COG4221          53 GAALALALDVTDRAA-V-EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER  130 (246)
T ss_pred             CceEEEeeccCCHHH-H-HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence            468899999999631 0 11122   2234689999999986531       1235588999999999888765432   


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      +.-.++.+||.
T Consensus       131 ~~G~IiN~~Si  141 (246)
T COG4221         131 KSGHIINLGSI  141 (246)
T ss_pred             CCceEEEeccc
Confidence            22245666664

>PLN02253 xanthoxin dehydrogenase

Probab=92.40  E-value=0.78  Score=33.79  Aligned_cols=58  Identities=16%  Similarity=0.159  Sum_probs=38.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|++||+|+....         ...+...+.+|+.|+..+++.+..
T Consensus        67 ~~~~~~~Dl~d~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  140 (280)
T PLN02253         67 NVCFFHCDVTVE------DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAAR  140 (280)
T ss_pred             ceEEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            456677887543      2233332       368999999986421         133566889999999999887654

>PRK08703 short chain dehydrogenase; Provisional

Probab=92.39  E-value=0.6  Score=33.50  Aligned_cols=60  Identities=17%  Similarity=0.092  Sum_probs=38.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHH----H---h-cCccEEEEcceeec----ch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDREL----L---R-TNVNVIFHGAATVR----FD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~----~---~-~~~d~Vih~aa~~~----~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|+++..    .+.+..    +   . ..+|+|||+|+...    +.    ..+...+++|+.|+..+++.+..
T Consensus        57 ~~~~~~~D~~~~~----~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  132 (239)
T PRK08703         57 EPFAIRFDLMSAE----EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP  132 (239)
T ss_pred             CcceEEeeecccc----hHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            4677889997632    111222    1   2 46799999999632    11    22344688999999988887754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=92.34  E-value=0.85  Score=32.79  Aligned_cols=58  Identities=22%  Similarity=0.228  Sum_probs=39.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+.++.      ...++.       ..+|+++|+|+.....       ..+...+.+|+.|+..+++.+..
T Consensus        57 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (247)
T PRK12935         57 DVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLP  128 (247)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4566777875432      223222       3479999999864321       34666789999999999988864

>PRK09135 pteridine reductase; Provisional

Probab=92.21  E-value=0.68  Score=33.21  Aligned_cols=57  Identities=14%  Similarity=0.095  Sum_probs=38.1

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEcccccc-------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR-------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~-------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..++.+|+.++      ...+++.       ..+|+|+|+|+...       ........+.+|+.|+.++++.+..
T Consensus        59 ~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  129 (249)
T PRK09135         59 AAALQADLLDP------DALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP  129 (249)
T ss_pred             eEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence            45667786432      2333333       35799999998532       1223566888999999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=92.19  E-value=0.65  Score=33.87  Aligned_cols=95  Identities=15%  Similarity=0.058  Sum_probs=52.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec---------c----hhhHHHHHHhhhhcHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR---------F----DEKIQLAVAINVLGVRAML   73 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~---------~----~~~~~~~~~~nv~gt~~ll   73 (166)
                      .++.++.+|++++.      +++.+.       .++|++||+|+...         +    ...+...+.+|+.+...+.
T Consensus        59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  132 (260)
T PRK08416         59 IKAKAYPLNILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGA  132 (260)
T ss_pred             CceEEEEcCCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence            36889999999853      233222       35899999997531         1    1123446777887776655


Q ss_pred             HHHHHH---hccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          74 ELAREI---RQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        74 ~l~~~~---~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ..+...   .+...++++||....     .+.++   ...|+.++...+.++
T Consensus       133 ~~~~~~~~~~~~g~iv~isS~~~~-----~~~~~---~~~Y~asK~a~~~~~  176 (260)
T PRK08416        133 QEAAKRMEKVGGGSIISLSSTGNL-----VYIEN---YAGHGTSKAAVETMV  176 (260)
T ss_pred             HHHHHhhhccCCEEEEEEeccccc-----cCCCC---cccchhhHHHHHHHH
Confidence            543321   112356666664321     11111   245667776655443

>PRK06482 short chain dehydrogenase; Provisional

Probab=92.16  E-value=0.86  Score=33.49  Aligned_cols=58  Identities=16%  Similarity=0.221  Sum_probs=38.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++.      ..++++       ..+|+|||+|+.....       ..+...+.+|+.|+.++++.+..
T Consensus        49 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  120 (276)
T PRK06482         49 RLWVLQLDVTDSA------AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALP  120 (276)
T ss_pred             ceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4456677875432      222222       3579999999864322       23556788999999999998743

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=92.06  E-value=0.59  Score=34.25  Aligned_cols=64  Identities=11%  Similarity=0.054  Sum_probs=39.7

Q ss_pred             ceEEEecCCCCCCCCCC--HHhHHHH---hcCccEEEEcceeecch------------------hhHHHHHHhhhhcHHH
Q psy3446          15 KISAVAGDVSLPGLGLS--ETDRELL---RTNVNVIFHGAATVRFD------------------EKIQLAVAINVLGVRA   71 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~--~~~~~~~---~~~~d~Vih~aa~~~~~------------------~~~~~~~~~nv~gt~~   71 (166)
                      ++.++.+|++++.---.  ....+.+   ...+|+|||+||.....                  ..+...+.+|+.++..
T Consensus        53 ~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~  132 (267)
T TIGR02685        53 SAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYF  132 (267)
T ss_pred             ceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHH
Confidence            56689999999742100  0111111   23589999999864211                  1244578999999988


Q ss_pred             HHHHHHH
Q psy3446          72 MLELARE   78 (166)
Q Consensus        72 ll~l~~~   78 (166)
                      +.+.+..
T Consensus       133 l~~~~~~  139 (267)
T TIGR02685       133 LIKAFAQ  139 (267)
T ss_pred             HHHHHHH
Confidence            8876543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=92.06  E-value=0.59  Score=45.02  Aligned_cols=76  Identities=17%  Similarity=0.196  Sum_probs=49.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHhccch
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIRQLKL   84 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~   84 (166)
                      .++.++.+|++|+.- + ...+..+.  ..+|.|||+||....       ...+...+.+|+.|+.+++..+... ..+.
T Consensus      2094 ~~v~y~~~DVtD~~a-v-~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~-~~~~ 2170 (2582)
T TIGR02813      2094 ASAEYASADVTNSVS-V-AATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAE-NIKL 2170 (2582)
T ss_pred             CcEEEEEccCCCHHH-H-HHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCe
Confidence            368899999999531 0 11112221  148999999997431       1234567899999999999887653 3345


Q ss_pred             hhcccccC
Q psy3446          85 FLRLKTEV   92 (166)
Q Consensus        85 ~~~~ss~~   92 (166)
                      ++.+||..
T Consensus      2171 IV~~SSva 2178 (2582)
T TIGR02813      2171 LALFSSAA 2178 (2582)
T ss_pred             EEEEechh
Confidence            66676653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=92.05  E-value=0.77  Score=31.45  Aligned_cols=52  Identities=13%  Similarity=0.222  Sum_probs=38.5

Q ss_pred             eeeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          96 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        96 ~~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ..++.++.+|+.      +...+.+.++++|.||++++....          ....+.++++.+++.+
T Consensus        38 ~~~~~~~~~d~~------d~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~~   89 (183)
T PF13460_consen   38 SPGVEIIQGDLF------DPDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKAG   89 (183)
T ss_dssp             CTTEEEEESCTT------CHHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHTT
T ss_pred             ccccccceeeeh------hhhhhhhhhhhcchhhhhhhhhcc----------cccccccccccccccc
Confidence            457788889973      346678888899999999864322          1667888899888753

...

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=92.01  E-value=0.74  Score=38.82  Aligned_cols=56  Identities=18%  Similarity=0.141  Sum_probs=37.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++..+.+|++++.      ++..+.+       ++|+|||+|+.....       ..+...+.+|+.|...+...+
T Consensus       466 ~~~~v~~Dvtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~a  535 (676)
T TIGR02632       466 RAVALKMDVTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREA  535 (676)
T ss_pred             cEEEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5778999999853      3443333       689999999965321       123456778988887765443

>PRK06523 short chain dehydrogenase; Provisional

Probab=91.63  E-value=2.3  Score=30.83  Aligned_cols=38  Identities=18%  Similarity=0.189  Sum_probs=27.1

Q ss_pred             ccccEEEEcccccc---------chHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVR---------FDEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~---------~~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|+++|+|+...         -...+...+.+|+.|+..+.+.+.
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  122 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL  122 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence            46899999998431         123456678899999988866554

>PRK06125 short chain dehydrogenase; Provisional

Probab=91.63  E-value=0.87  Score=33.12  Aligned_cols=58  Identities=22%  Similarity=0.321  Sum_probs=40.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++.      .+..+.   ..+|++||+|+....       ...+...+.+|+.|...+.+.+.
T Consensus        57 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  124 (259)
T PRK06125         57 VDVAVHALDLSSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAY  124 (259)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            36789999999853      233332   468999999986421       12335578899999988887654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=91.62  E-value=0.87  Score=33.16  Aligned_cols=72  Identities=17%  Similarity=0.185  Sum_probs=41.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc------hh---hHHHHHHhhhhcHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF------DE---KIQLAVAINVLGVRAMLELAR-   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~------~~---~~~~~~~~nv~gt~~ll~l~~-   77 (166)
                      ++.++.+|++++.      +++.+.       ..+|++||+|+....      ..   .+...+.+|+.+...+...+- 
T Consensus        49 ~~~~~~~Dv~d~~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~  122 (259)
T PRK08340         49 EVYAVKADLSDKD------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQ  122 (259)
T ss_pred             CceEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHH
Confidence            5788999999853      233332       368999999996421      11   123345678777665544322 


Q ss_pred             HH---hccchhhcccccC
Q psy3446          78 EI---RQLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~~   92 (166)
                      ..   .....++++||..
T Consensus       123 ~~~~~~~~g~iv~isS~~  140 (259)
T PRK08340        123 AWLEKKMKGVLVYLSSVS  140 (259)
T ss_pred             HHHhcCCCCEEEEEeCcc
Confidence            11   1223566766653

>PRK06924 short chain dehydrogenase; Provisional

Probab=91.58  E-value=0.4  Score=34.64  Aligned_cols=73  Identities=14%  Similarity=0.066  Sum_probs=43.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC---------c--cEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN---------V--NVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~---------~--d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~   74 (166)
                      .+++++.+|++++.      +++.+.++         .  .+++|+|+....        ...+...+++|+.|...+..
T Consensus        48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (251)
T PRK06924         48 SNLTFHSLDLQDVH------ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS  121 (251)
T ss_pred             CceEEEEecCCCHH------HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHH
Confidence            46889999999863      23333221         1  278999987532        12234567889999777666


Q ss_pred             HHHHHh----ccchhhcccccC
Q psy3446          75 LAREIR----QLKLFLRLKTEV   92 (166)
Q Consensus        75 l~~~~~----~~~~~~~~ss~~   92 (166)
                      .+....    ....++++|+..
T Consensus       122 ~~~~~~~~~~~~~~iv~~sS~~  143 (251)
T PRK06924        122 TFMKHTKDWKVDKRVINISSGA  143 (251)
T ss_pred             HHHHHHhccCCCceEEEecchh
Confidence            544321    123466666643

>KOG1429|consensus

Probab=91.22  E-value=0.035  Score=41.36  Aligned_cols=45  Identities=31%  Similarity=0.423  Sum_probs=36.5

Q ss_pred             HHHHhccccEEEEccccc---cchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         118 RELLRTNVNVIFHGAATV---RFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       118 ~~~l~~~~d~i~h~aa~~---~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ..++..++|.|||+|+..   .|..+......+|+.|+.+++-+|++.
T Consensus        85 ~~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv  132 (350)
T KOG1429|consen   85 VEPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV  132 (350)
T ss_pred             hhHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh
Confidence            456778899999999964   355556667788999999999999885

>PRK05717 oxidoreductase; Validated

Probab=91.21  E-value=1.1  Score=32.41  Aligned_cols=62  Identities=13%  Similarity=0.056  Sum_probs=39.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh---ccccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~---~~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+.++.- + ...++++.   ..+|++||+|+....         ...+...+.+|+.|+.++++.+..
T Consensus        57 ~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (255)
T PRK05717         57 NAWFIAMDVADEAQ-V-AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP  130 (255)
T ss_pred             ceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            44567788754320 0 01122222   357999999986431         123456889999999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.20  E-value=1.1  Score=32.35  Aligned_cols=64  Identities=13%  Similarity=0.074  Sum_probs=38.8

Q ss_pred             eeEeecCCCCCCCCCCC-HHhHHHHhccccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLS-ETDRELLRTNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls-~~~~~~l~~~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++.--.. ...+.+....+|++||+|+....         ...+...+..|+.|+..+++.+..
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (256)
T PRK12745         53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK  126 (256)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence            45667788754321000 00111122468999999985321         234566789999999999888754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.16  E-value=0.75  Score=33.45  Aligned_cols=62  Identities=23%  Similarity=0.207  Sum_probs=39.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc--------h---hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF--------D---EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~--------~---~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.- + +..++.+   ...+|++||+|+....        .   ..+...+++|+.|...+...+..
T Consensus        56 ~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~  131 (252)
T PRK06079         56 EDLLVECDVASDES-I-ERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP  131 (252)
T ss_pred             ceeEEeCCCCCHHH-H-HHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence            57889999998531 0 1112222   2358999999986431        1   12345678899998888776554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.15  E-value=1.1  Score=33.01  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=44.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ...++.+|++++.- + +..++.+.   ..+|++||+|+....           ...+...+.+|+.|+..+.+.+....
T Consensus        61 ~~~~~~~Dl~~~~~-v-~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~  138 (272)
T PRK08159         61 AFVAGHCDVTDEAS-I-DAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLM  138 (272)
T ss_pred             CceEEecCCCCHHH-H-HHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            35678999998531 0 11122222   358999999986531           12345578899999998887765432


Q ss_pred             -ccchhhcccc
Q psy3446          81 -QLKLFLRLKT   90 (166)
Q Consensus        81 -~~~~~~~~ss   90 (166)
                       +...++.+++
T Consensus       139 ~~~g~Iv~iss  149 (272)
T PRK08159        139 TDGGSILTLTY  149 (272)
T ss_pred             CCCceEEEEec
Confidence             1223444544

>PRK08264 short chain dehydrogenase; Validated

Probab=91.14  E-value=1.7  Score=31.02  Aligned_cols=58  Identities=16%  Similarity=0.223  Sum_probs=38.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc---cccEEEEcccc-cc-------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAAT-VR-------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~---~~d~i~h~aa~-~~-------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.+   .+|+|||+|+. ..       -...+.....+|+.|+..+++.+..
T Consensus        50 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  118 (238)
T PRK08264         50 RVVPLQLDVTDP------ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAP  118 (238)
T ss_pred             ceEEEEecCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            455677787542      33444433   58999999986 21       1233555788999999999888754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=91.02  E-value=1.3  Score=31.85  Aligned_cols=58  Identities=21%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...++.|+..+      ...++++       ..+|++||+|+....       ...+.....+|+.|+..+++.+..
T Consensus        49 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (252)
T PRK08220         49 PFATFVLDVSDA------AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP  120 (252)
T ss_pred             ceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455667776432      2333333       347999999986432       124566788999999999988754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=91.00  E-value=0.56  Score=34.31  Aligned_cols=75  Identities=16%  Similarity=0.185  Sum_probs=44.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeec-------ch----hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVR-------FD----EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~-------~~----~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++.- + ....+.+.   ..+|++||+|+...       +.    ..+...+.+|+.|...+.+.+....
T Consensus        60 ~~~~~~~Dl~d~~~-v-~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m  137 (258)
T PRK07370         60 PSLFLPCDVQDDAQ-I-EETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM  137 (258)
T ss_pred             cceEeecCcCCHHH-H-HHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHH
Confidence            46788999998631 0 11112221   35899999999642       11    1234578899999988877654322


Q ss_pred             -ccchhhccccc
Q psy3446          81 -QLKLFLRLKTE   91 (166)
Q Consensus        81 -~~~~~~~~ss~   91 (166)
                       +...++++|+.
T Consensus       138 ~~~g~Iv~isS~  149 (258)
T PRK07370        138 SEGGSIVTLTYL  149 (258)
T ss_pred             hhCCeEEEEecc
Confidence             22345555553

>KOG0747|consensus

Probab=90.93  E-value=0.055  Score=40.28  Aligned_cols=65  Identities=22%  Similarity=0.250  Sum_probs=43.5

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHH---HHHHHHHHHHHHHHHHHHHHhhcC
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQL  165 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~---~~~~~~Nv~G~~~~l~~a~~~~~l  165 (166)
                      ++..++++|+.....-+    +--+-.++|.|+|.||..+.+..+   -.+..-|++|+.++||.++..+++
T Consensus        57 p~ykfv~~di~~~~~~~----~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i  124 (331)
T KOG0747|consen   57 PNYKFVEGDIADADLVL----YLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNI  124 (331)
T ss_pred             CCceEeeccccchHHHH----hhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCe
Confidence            45567777764332100    111225789999999987665543   335667999999999999988665

>PRK06194 hypothetical protein; Provisional

Probab=90.90  E-value=1.1  Score=33.05  Aligned_cols=56  Identities=21%  Similarity=0.239  Sum_probs=37.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+.+|++++      .+.+++.+       .+|+++|+|+.....       ......+.+|+.|+.++++.+
T Consensus        56 ~~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  125 (287)
T PRK06194         56 EVLGVRTDVSDA------AQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF  125 (287)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence            456678887543      23444433       479999999974321       234556889999999976664

>PRK12367 short chain dehydrogenase; Provisional

Probab=90.77  E-value=1.1  Score=32.58  Aligned_cols=45  Identities=22%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             hHHHHhccccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         117 DRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       117 ~~~~l~~~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +.++....+|+++|+|+....    .......+.+|+.|+.++++.+..
T Consensus        72 ~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  120 (245)
T PRK12367         72 SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED  120 (245)
T ss_pred             HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            445556679999999985321    234566889999999999987754

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=90.55  E-value=2.1  Score=30.65  Aligned_cols=57  Identities=18%  Similarity=0.186  Sum_probs=38.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+.+|+.++      ...+++.       ..+|.++|+|+....       ...+......|+.|+.++++.+.
T Consensus        56 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  126 (251)
T PRK12826         56 KARARQVDVRDR------AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAAL  126 (251)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            355677786432      2333333       368999999986543       23456678899999999998875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.50  E-value=2.4  Score=30.16  Aligned_cols=59  Identities=12%  Similarity=-0.020  Sum_probs=38.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEcccccc----c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~----~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+..+     -....+....+|+++|+|+...    +    ...+...+.+|+.|+.++++.+..
T Consensus        46 ~~~~~~~D~~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  112 (235)
T PRK06550         46 NFHFLQLDLSDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP  112 (235)
T ss_pred             cEEEEECChHHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455667776544     1222223356899999998431    1    124566789999999999888764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=90.49  E-value=1.5  Score=33.15  Aligned_cols=58  Identities=17%  Similarity=0.120  Sum_probs=37.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...++++       ..+|++||+|+....        .......+.+|+.|+..+++.+..
T Consensus        56 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  128 (322)
T PRK07453         56 SYTIIHIDLGDL------DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE  128 (322)
T ss_pred             ceEEEEecCCCH------HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            445667786442      2233333       248999999985321        123566789999999999888764

>PTZ00325 malate dehydrogenase; Provisional

Probab=90.48  E-value=0.65  Score=35.48  Aligned_cols=57  Identities=12%  Similarity=0.025  Sum_probs=43.1

Q ss_pred             HHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          36 ELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        36 ~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+.+.++|+|+++|+...- +.+..+.+..|+..++.+....++. ...+++.++|...
T Consensus        71 ~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPv  128 (321)
T PTZ00325         71 EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPV  128 (321)
T ss_pred             HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcH
Confidence            4456899999999998543 4556678899999999999988875 4455666666543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.45  E-value=1.6  Score=32.03  Aligned_cols=58  Identities=16%  Similarity=0.117  Sum_probs=38.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc------------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~------------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      ++.++.+|++++.      +++.+.       ..+|++||+|+....            ...+...+++|+.|...+.+.
T Consensus        57 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  130 (262)
T PRK07984         57 SDIVLPCDVAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA  130 (262)
T ss_pred             CceEeecCCCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence            4668899999853      333332       247999999986421            112344678899988777766


Q ss_pred             HHH
Q psy3446          76 ARE   78 (166)
Q Consensus        76 ~~~   78 (166)
                      +..
T Consensus       131 ~~~  133 (262)
T PRK07984        131 CRS  133 (262)
T ss_pred             HHH
Confidence            543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.38  E-value=1.3  Score=32.40  Aligned_cols=73  Identities=15%  Similarity=0.095  Sum_probs=43.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc------------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~------------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ..++.+|++++.- + ...++.+   ...+|++||+|+....            ...+...+++|+.|...+.+.+....
T Consensus        58 ~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m  135 (260)
T PRK06997         58 DLVFPCDVASDEQ-I-DALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPML  135 (260)
T ss_pred             cceeeccCCCHHH-H-HHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence            3478899998641 0 1111222   2458999999987531            11234568899999988877655432


Q ss_pred             -ccchhhcccc
Q psy3446          81 -QLKLFLRLKT   90 (166)
Q Consensus        81 -~~~~~~~~ss   90 (166)
                       +...++++|+
T Consensus       136 ~~~g~Ii~iss  146 (260)
T PRK06997        136 SDDASLLTLSY  146 (260)
T ss_pred             CCCceEEEEec
Confidence             1223455554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.36  E-value=1.1  Score=32.80  Aligned_cols=58  Identities=22%  Similarity=0.238  Sum_probs=39.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++.      +.+++       ...+|++||+|+....           ...+...+++|+.|...+.+.+
T Consensus        61 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~  134 (258)
T PRK07533         61 APIFLPLDVREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLA  134 (258)
T ss_pred             cceEEecCcCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence            3568899999853      23322       2358999999986421           1234567899999999888866


Q ss_pred             HH
Q psy3446          77 RE   78 (166)
Q Consensus        77 ~~   78 (166)
                      ..
T Consensus       135 ~p  136 (258)
T PRK07533        135 EP  136 (258)
T ss_pred             HH
Confidence            54

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.27  E-value=1.4  Score=32.49  Aligned_cols=74  Identities=14%  Similarity=0.106  Sum_probs=43.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ..++.+|++++.- + ...++.+.   ..+|++||+|+....           ...+...+.+|+.|+..+.+.+.... 
T Consensus        59 ~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~  136 (271)
T PRK06505         59 DFVLPCDVEDIAS-V-DAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP  136 (271)
T ss_pred             ceEEeCCCCCHHH-H-HHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc
Confidence            3578999998531 0 11122222   358999999996431           12234567899999888776554322 


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      ....++++++.
T Consensus       137 ~~G~Iv~isS~  147 (271)
T PRK06505        137 DGGSMLTLTYG  147 (271)
T ss_pred             cCceEEEEcCC
Confidence            11235555543

>PRK07856 short chain dehydrogenase; Provisional

Probab=90.24  E-value=1.9  Score=31.22  Aligned_cols=58  Identities=19%  Similarity=0.188  Sum_probs=37.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      .+.++++       ..+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        48 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  119 (252)
T PRK07856         48 PAEFHAADVRDP------DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA  119 (252)
T ss_pred             ceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            445566776442      2333333       356999999985321       123556789999999999988764

>PRK06180 short chain dehydrogenase; Provisional

Probab=90.22  E-value=1.9  Score=31.78  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=28.5

Q ss_pred             cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+.....       ..+...+.+|+.|+.++++.+..
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  122 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLP  122 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            589999999964321       23455688999999999988643

>PLN02780 ketoreductase/ oxidoreductase

Probab=90.04  E-value=1.1  Score=34.14  Aligned_cols=73  Identities=15%  Similarity=0.174  Sum_probs=44.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHH---HHhc--CccEEEEcceeecc------h---hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRE---LLRT--NVNVIFHGAATVRF------D---EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~---~~~~--~~d~Vih~aa~~~~------~---~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++..+.+|+++.   + .+.++   +...  ++|++||+||....      .   ..+...+++|+.|+..+.+.+... 
T Consensus       105 ~~~~~~~Dl~~~---~-~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m  180 (320)
T PLN02780        105 QIKTVVVDFSGD---I-DEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGM  180 (320)
T ss_pred             EEEEEEEECCCC---c-HHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            577888999852   1 12222   2223  36699999997531      1   123457889999999888876532 


Q ss_pred             --hccchhhccccc
Q psy3446          80 --RQLKLFLRLKTE   91 (166)
Q Consensus        80 --~~~~~~~~~ss~   91 (166)
                        .+...++++||.
T Consensus       181 ~~~~~g~IV~iSS~  194 (320)
T PLN02780        181 LKRKKGAIINIGSG  194 (320)
T ss_pred             HhcCCcEEEEEech
Confidence              122345666553

>PRK09134 short chain dehydrogenase; Provisional

Probab=89.93  E-value=2.1  Score=31.05  Aligned_cols=58  Identities=10%  Similarity=0.142  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+.++.      ....+       ...+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        60 ~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (258)
T PRK09134         60 RAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR  131 (258)
T ss_pred             eEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4556778875432      22222       2357999999985321       234566889999999999887765

>PRK06128 oxidoreductase; Provisional

Probab=89.88  E-value=1.9  Score=32.25  Aligned_cols=58  Identities=17%  Similarity=0.134  Sum_probs=38.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+.++      ...+++       ...+|++||+|+....        .......+.+|+.|+..+++.+..
T Consensus       107 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  179 (300)
T PRK06128        107 KAVALPGDLKDE------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP  179 (300)
T ss_pred             eEEEEecCCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            445677787543      222222       2468999999985321        124566889999999999998864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.85  E-value=2.3  Score=31.03  Aligned_cols=76  Identities=14%  Similarity=0.095  Sum_probs=44.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecc--------hh---hHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRF--------DE---KIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~--------~~---~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.- + +...+.+.   ..+|+++|+|+....        ..   .+...+++|+.+...+.+.+...
T Consensus        59 ~~~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  136 (257)
T PRK08594         59 QESLLLPCDVTSDEE-I-TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKL  136 (257)
T ss_pred             CceEEEecCCCCHHH-H-HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            467889999998631 0 11122222   358999999986431        11   12346778888887776655432


Q ss_pred             h-ccchhhccccc
Q psy3446          80 R-QLKLFLRLKTE   91 (166)
Q Consensus        80 ~-~~~~~~~~ss~   91 (166)
                      . +...++++|+.
T Consensus       137 ~~~~g~Iv~isS~  149 (257)
T PRK08594        137 MTEGGSIVTLTYL  149 (257)
T ss_pred             cccCceEEEEccc
Confidence            2 22345566554

>PRK06179 short chain dehydrogenase; Provisional

Probab=89.84  E-value=1.7  Score=31.73  Aligned_cols=58  Identities=16%  Similarity=0.113  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.++      .+++++.       ..+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        46 ~~~~~~~D~~d~------~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  117 (270)
T PRK06179         46 GVELLELDVTDD------ASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLP  117 (270)
T ss_pred             CCeeEEeecCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            445667787543      3344443       347999999986432       134566889999999998887643

>PRK12746 short chain dehydrogenase; Provisional

Probab=89.78  E-value=1.9  Score=31.13  Aligned_cols=38  Identities=11%  Similarity=0.165  Sum_probs=28.2

Q ss_pred             cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+.....       ..+...+.+|+.|+.++++.+..
T Consensus        90 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  134 (254)
T PRK12746         90 EIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLP  134 (254)
T ss_pred             CccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            589999999863321       12345678999999999998875

>PRK12937 short chain dehydrogenase; Provisional

Probab=89.71  E-value=2.2  Score=30.55  Aligned_cols=58  Identities=22%  Similarity=0.256  Sum_probs=38.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|+++|+|+....       ...+......|+.|+.++++.+.+
T Consensus        56 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (245)
T PRK12937         56 RAIAVQADVADA------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR  127 (245)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            455667776442      2333333       368999999986431       123555788999999999887754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=89.53  E-value=4.1  Score=29.63  Aligned_cols=39  Identities=15%  Similarity=0.115  Sum_probs=28.6

Q ss_pred             ccccEEEEccccccc----------------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF----------------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~----------------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....                .........+|+.|+..+++.+..
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVAR  130 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHH
Confidence            357999999985321                123455788999999999888765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=89.31  E-value=2.4  Score=30.75  Aligned_cols=39  Identities=18%  Similarity=0.368  Sum_probs=30.1

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (257)
T PRK07067         79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR  124 (257)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            368999999986432       234666789999999999998864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.30  E-value=2  Score=31.46  Aligned_cols=57  Identities=16%  Similarity=0.126  Sum_probs=36.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------h-h---hHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------D-E---KIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~-~---~~~~~~~~nv~gt~~ll~l   75 (166)
                      ....+.+|++++.      +++.+.       ..+|++||+||....        . .   .+...+.+|+.+...+.+.
T Consensus        57 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~  130 (261)
T PRK08690         57 SELVFRCDVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKA  130 (261)
T ss_pred             CceEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHH
Confidence            3457899999853      333332       358999999997532        1 1   2234567888888777665


Q ss_pred             HH
Q psy3446          76 AR   77 (166)
Q Consensus        76 ~~   77 (166)
                      +.
T Consensus       131 ~~  132 (261)
T PRK08690        131 AR  132 (261)
T ss_pred             HH
Confidence            44

>PRK08278 short chain dehydrogenase; Provisional

Probab=89.27  E-value=2.2  Score=31.41  Aligned_cols=58  Identities=16%  Similarity=0.229  Sum_probs=38.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      ...+++.       ..+|++||+|+.....       ......+.+|+.|+.++++.+..
T Consensus        63 ~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  134 (273)
T PRK08278         63 QALPLVGDVRDE------DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP  134 (273)
T ss_pred             ceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence            455667787543      2222222       3689999999864321       23455788999999999998864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=89.27  E-value=0.88  Score=33.68  Aligned_cols=62  Identities=11%  Similarity=0.134  Sum_probs=40.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh------cC-ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR------TN-VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~------~~-~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      ..++.+.+|++|+.      .+..++      .+ +|.|||+++...  ..        .....++++.+++ .++++++
T Consensus        39 ~~~~~~~~d~~d~~------~l~~a~~~~~~~~g~~d~v~~~~~~~~--~~--------~~~~~~~i~aa~~-~gv~~~V  101 (285)
T TIGR03649        39 PNEKHVKFDWLDED------TWDNPFSSDDGMEPEISAVYLVAPPIP--DL--------APPMIKFIDFARS-KGVRRFV  101 (285)
T ss_pred             CCCccccccCCCHH------HHHHHHhcccCcCCceeEEEEeCCCCC--Ch--------hHHHHHHHHHHHH-cCCCEEE
Confidence            35778889998853      355555      45 899999987532  11        1233567777776 4567788


Q ss_pred             cccccC
Q psy3446          87 RLKTEV   92 (166)
Q Consensus        87 ~~ss~~   92 (166)
                      ++|+..
T Consensus       102 ~~Ss~~  107 (285)
T TIGR03649       102 LLSASI  107 (285)
T ss_pred             Eeeccc
Confidence            887643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=89.09  E-value=2.4  Score=30.76  Aligned_cols=39  Identities=15%  Similarity=0.273  Sum_probs=29.4

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK  129 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            358999999986432       134666889999999998887654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.08  E-value=1.5  Score=32.01  Aligned_cols=62  Identities=13%  Similarity=0.201  Sum_probs=39.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeec-------c-h---hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVR-------F-D---EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~-------~-~---~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++.- + ....+.+   ...+|++||+|+...       + .   ..+...+++|+.|...+...+..
T Consensus        58 ~~~~~~~Dv~~~~~-i-~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  133 (256)
T PRK07889         58 PAPVLELDVTNEEH-L-ASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLP  133 (256)
T ss_pred             CCcEEeCCCCCHHH-H-HHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            57789999998631 0 1111222   235899999999752       1 1   12234688999998887776543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=89.00  E-value=0.82  Score=33.01  Aligned_cols=37  Identities=22%  Similarity=0.392  Sum_probs=30.5

Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|++||+|+... ..++...+.+|+.|+..+++++..
T Consensus        48 ~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~   84 (241)
T PRK12428         48 RIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLP   84 (241)
T ss_pred             CCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHH
Confidence            5899999998643 346777899999999999998864

>PRK07774 short chain dehydrogenase; Provisional

Probab=88.54  E-value=3.2  Score=29.78  Aligned_cols=40  Identities=10%  Similarity=0.027  Sum_probs=29.3

Q ss_pred             ccccEEEEccccccc----------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 TNVNVIFHGAATVRF----------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~----------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ..+|+|||+|+....          ...+...+.+|+.|+.++++.+...
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKH  131 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            358999999996321          1234456789999999999988753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.34  E-value=2.2  Score=30.42  Aligned_cols=71  Identities=10%  Similarity=0.019  Sum_probs=43.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-----hhHHHHHHhhhhcHHHHHHHHHHHh-c
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-----EKIQLAVAINVLGVRAMLELAREIR-Q   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-----~~~~~~~~~nv~gt~~ll~l~~~~~-~   81 (166)
                      ++.++.+|++++.      ...++       ...+|.++|+++.....     ..+...+.+|+.+...+++...... +
T Consensus        54 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  127 (238)
T PRK05786         54 NIHYVVGDVSSTE------SARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE  127 (238)
T ss_pred             CeEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc
Confidence            5889999999864      22222       23479999999853211     2234467889999888877665431 2


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++.+|+.
T Consensus       128 ~~~iv~~ss~  137 (238)
T PRK05786        128 GSSIVLVSSM  137 (238)
T ss_pred             CCEEEEEecc
Confidence            2345555553

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.25  E-value=3.8  Score=29.28  Aligned_cols=58  Identities=16%  Similarity=0.241  Sum_probs=38.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|++||+|+....       .......+..|+.|+.++++.+..
T Consensus        57 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (239)
T PRK07666         57 KVVIATADVSDY------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLP  128 (239)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            556677786443      2223322       368999999985322       123456789999999998887754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=88.11  E-value=3.8  Score=29.35  Aligned_cols=58  Identities=21%  Similarity=0.184  Sum_probs=37.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++++|+..+      ...+++.       ..+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        53 ~~~~~~~d~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (250)
T TIGR03206        53 NAQAFACDITDR------DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLP  124 (250)
T ss_pred             cEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            455677776432      2333332       358999999985321       122455788999999998887753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08267 short chain dehydrogenase; Provisional

Probab=88.05  E-value=2.2  Score=31.00  Aligned_cols=39  Identities=28%  Similarity=0.267  Sum_probs=29.4

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  121 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP  121 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            357999999986431       124566889999999999888754

>PRK06398 aldose dehydrogenase; Validated

Probab=87.97  E-value=5.8  Score=28.88  Aligned_cols=58  Identities=14%  Similarity=0.168  Sum_probs=38.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      .+.+++.       ..+|+++|+|+...+       .......+.+|+.|+..+++.+..
T Consensus        45 ~~~~~~~D~~~~------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  116 (258)
T PRK06398         45 DVDYFKVDVSNK------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP  116 (258)
T ss_pred             ceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455677787543      2233222       368999999985321       223555789999999998887754

>PRK07326 short chain dehydrogenase; Provisional

Probab=87.96  E-value=3.2  Score=29.52  Aligned_cols=39  Identities=21%  Similarity=0.302  Sum_probs=29.0

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+....       ...+.....+|+.|+..+++.+.+
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVP  126 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            368999999985432       223556788899999998888764

>PRK06123 short chain dehydrogenase; Provisional

Probab=87.95  E-value=3.5  Score=29.54  Aligned_cols=38  Identities=16%  Similarity=0.225  Sum_probs=28.1

Q ss_pred             cccEEEEccccccc----h----HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF----D----EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~----~----~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+....    .    ..+.....+|+.|+..+++.+..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK  125 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            68999999986421    1    13446789999999998877754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=87.95  E-value=4.2  Score=29.22  Aligned_cols=63  Identities=11%  Similarity=0.120  Sum_probs=38.1

Q ss_pred             eeEeecCCCCCCCCCCCH--HhHHHHhccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSE--TDRELLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~--~~~~~l~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.++.- +..  ....+....+|+|||+|+....       ...+......|+.|+..+++.+..
T Consensus        51 ~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  122 (255)
T TIGR01963        51 SVIYLVADVTKEDE-IADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALP  122 (255)
T ss_pred             ceEEEECCCCCHHH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45667788754320 000  0222333568999999986431       123455778899999988887743

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=87.54  E-value=3.8  Score=29.71  Aligned_cols=58  Identities=21%  Similarity=0.186  Sum_probs=37.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.++.      ..+++       ...+|++||+|+....       ...+...+..|+.|+..+++.+..
T Consensus        62 ~~~~~~~Dl~d~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  133 (259)
T PRK08213         62 DALWIAADVADEA------DIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAK  133 (259)
T ss_pred             eEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHH
Confidence            4556778875432      23222       2358999999985321       123455678999999999997754

>PRK12939 short chain dehydrogenase; Provisional

Probab=87.28  E-value=5  Score=28.69  Aligned_cols=58  Identities=19%  Similarity=0.225  Sum_probs=38.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|++||+++....       ...+......|+.|+.++++.+..
T Consensus        57 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  128 (250)
T PRK12939         57 RAHAIAADLADP------ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALP  128 (250)
T ss_pred             cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455677787442      2222222       468999999986431       234556778999999999888754

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.27  E-value=3.9  Score=30.72  Aligned_cols=58  Identities=26%  Similarity=0.330  Sum_probs=38.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.      ..+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        63 ~~~~~~~Dv~d~------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  133 (306)
T PRK07792         63 KAVAVAGDISQR------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA  133 (306)
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            455667787543      2233322      468999999986432       124556788999999999887653

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.15  E-value=2.9  Score=29.73  Aligned_cols=57  Identities=19%  Similarity=0.260  Sum_probs=37.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+.++      ..+.++       ...+|.+||+|+....       ...+......|+.|+.++++.+.
T Consensus        57 ~~~~~~~D~~~~------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  127 (249)
T PRK12825         57 RAQAVQADVTDK------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV  127 (249)
T ss_pred             ceEEEECCcCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            455677787543      222222       2468999999985432       22356678899999999988874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=87.13  E-value=3.1  Score=29.73  Aligned_cols=38  Identities=13%  Similarity=0.208  Sum_probs=28.5

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|.+||+|+....       ...+......|+.|+..+++.+.
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  123 (245)
T PRK12936         79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELT  123 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHH
Confidence            458999999986431       23456678999999998888764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=87.12  E-value=4.2  Score=29.38  Aligned_cols=58  Identities=12%  Similarity=0.039  Sum_probs=37.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|++||+|+....       ...+.....+|+.|+..+++.+.+
T Consensus        60 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (255)
T PRK07523         60 SAHALAFDVTDH------DAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR  131 (255)
T ss_pred             eEEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            355666776442      2233332       358999999986421       123455778999999999988764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=87.09  E-value=4  Score=29.49  Aligned_cols=56  Identities=23%  Similarity=0.135  Sum_probs=33.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHH----HHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGV----RAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~----~~~l~~a  159 (166)
                      ++..+..|++++.      ..++++       ..+|++||+|+....       ...+...+.+|+.|+    ..+++++
T Consensus        57 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~  130 (262)
T PRK13394         57 KAIGVAMDVTNED------AVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHM  130 (262)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            4556778875432      222222       358999999986432       123455778999994    4555555

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=86.96  E-value=2.4  Score=28.17  Aligned_cols=39  Identities=23%  Similarity=0.314  Sum_probs=28.8

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|.++|+|+.....       ..+......|+.|+..+++.+++
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD  125 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc
Confidence            3469999999853221       23456788999999999998854

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.91  E-value=4.3  Score=29.37  Aligned_cols=62  Identities=15%  Similarity=0.093  Sum_probs=37.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH---hccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l---~~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..++.|+.++.- + ....+++   ...+|+|+|+|+.....       ..+...+.+|+.|+..+++.+..
T Consensus        68 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  139 (256)
T PRK12748         68 RCEHMEIDLSQPYA-P-NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAK  139 (256)
T ss_pred             eEEEEECCCCCHHH-H-HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567778754220 0 0112222   24589999999853221       23455788999999999887753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=86.76  E-value=2.6  Score=33.35  Aligned_cols=55  Identities=16%  Similarity=0.169  Sum_probs=38.4

Q ss_pred             eecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         101 AVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       101 ~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+..|+.+      .....+...++|++||+|+....    .......+.+|+.|+.++++.+..
T Consensus       228 ~v~~Dvsd------~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        228 TLHWQVGQ------EAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             EEEeeCCC------HHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556533      33455666789999999985322    124566889999999999988764

>PRK06500 short chain dehydrogenase; Provisional

Probab=86.73  E-value=2.8  Score=30.06  Aligned_cols=39  Identities=15%  Similarity=0.263  Sum_probs=29.9

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+...+.       ..+......|+.|+..+++.+..
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP  124 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4689999999864321       23556788999999999998864

>PRK08643 acetoin reductase; Validated

Probab=86.71  E-value=5.4  Score=28.78  Aligned_cols=62  Identities=27%  Similarity=0.234  Sum_probs=37.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH---hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l---~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++.- + ....+++   ...+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        52 ~~~~~~~Dl~~~~~-~-~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (256)
T PRK08643         52 KAIAVKADVSDRDQ-V-FAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE  123 (256)
T ss_pred             eEEEEECCCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            44566778755421 0 0111111   2368999999985321       123456788999999887777654

>PRK07814 short chain dehydrogenase; Provisional

Probab=86.61  E-value=4.1  Score=29.72  Aligned_cols=39  Identities=13%  Similarity=0.137  Sum_probs=29.6

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP  131 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHH
Confidence            368999999985321       134566889999999999998864

>PRK05876 short chain dehydrogenase; Provisional

Probab=86.60  E-value=3.9  Score=30.21  Aligned_cols=57  Identities=19%  Similarity=0.253  Sum_probs=37.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++.++..|++++      .+.++++       ..+|++||+|+....       .......+.+|+.|+..+++.+.
T Consensus        56 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  126 (275)
T PRK05876         56 DVHGVMCDVRHR------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL  126 (275)
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            345567787543      2233332       357999999985321       12345578999999999988875

>PRK05875 short chain dehydrogenase; Provisional

Probab=86.50  E-value=4.9  Score=29.40  Aligned_cols=58  Identities=17%  Similarity=0.138  Sum_probs=37.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      ...+++.       ..+|++||+|+....        ...+...+.+|+.|+..+++.+.+
T Consensus        59 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (276)
T PRK05875         59 AVRYEPADVTDE------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR  131 (276)
T ss_pred             ceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455667786442      2333333       268999999985321        112455778899999999887654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.49  E-value=3.4  Score=29.59  Aligned_cols=58  Identities=26%  Similarity=0.232  Sum_probs=37.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++.+|+.++      ...+.++       ..+|+|||+|+....        ...+.....+|+.|+..+++.+..
T Consensus        54 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (251)
T PRK07231         54 RAIAVAADVSDE------ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP  126 (251)
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            455677887443      3333333       357999999985321        123556788999999888777654

>PRK06182 short chain dehydrogenase; Validated

Probab=86.11  E-value=3.3  Score=30.33  Aligned_cols=55  Identities=13%  Similarity=0.263  Sum_probs=34.3

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      +..+.+|++++      ...+++.       ..+|++||+|+...+.       ........+|+.|+..+++.+
T Consensus        48 ~~~~~~Dv~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  116 (273)
T PRK06182         48 VHPLSLDVTDE------ASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLV  116 (273)
T ss_pred             CeEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHH
Confidence            44566776442      3344433       2689999999864322       235567889999976655443

>KOG1208|consensus

Probab=86.04  E-value=3.5  Score=31.44  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=49.9

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecchh-----hHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFDE-----KIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~~-----~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ..++.++..|+++..      .+...       ....|+.|+.||......     -++..+.+|..|...+.++.... 
T Consensus        85 ~~~i~~~~lDLssl~------SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~l  158 (314)
T KOG1208|consen   85 NQKIRVIQLDLSSLK------SVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLL  158 (314)
T ss_pred             CCceEEEECCCCCHH------HHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHH
Confidence            357889999999953      23322       234699999999865332     23557889999998877765432 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        ....+++.+||...
T Consensus       159 k~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  159 KRSAPSRIVNVSSILG  174 (314)
T ss_pred             hhCCCCCEEEEcCccc
Confidence              11246777777553

>PRK06701 short chain dehydrogenase; Provisional

Probab=85.98  E-value=2.7  Score=31.35  Aligned_cols=58  Identities=19%  Similarity=0.123  Sum_probs=38.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch--------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~--------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+.++      ...+.++       ..+|++||+|+.....        ..+...+.+|+.|+..+++.+..
T Consensus        97 ~~~~~~~Dl~~~------~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~  169 (290)
T PRK06701         97 KCLLIPGDVSDE------AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP  169 (290)
T ss_pred             eEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            455677786442      2222222       3579999999853211        23455788999999999988875

>PRK07806 short chain dehydrogenase; Provisional

Probab=85.88  E-value=0.81  Score=32.93  Aligned_cols=58  Identities=17%  Similarity=0.106  Sum_probs=37.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEcccccc-chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR-FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~-~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.++      .+.+++.       ..+|+++|+|+... ........+.+|+.|+.++++.+..
T Consensus        57 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  122 (248)
T PRK07806         57 RASAVGADLTDE------ESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALP  122 (248)
T ss_pred             ceEEEEcCCCCH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHh
Confidence            345667787543      2233222       35899999997532 1223445678899999999998875

>PRK06914 short chain dehydrogenase; Provisional

Probab=85.85  E-value=1.9  Score=31.71  Aligned_cols=62  Identities=13%  Similarity=0.031  Sum_probs=37.2

Q ss_pred             eeEeecCCCCCCCCCCC-HHhHHHHhccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLS-ETDRELLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls-~~~~~~l~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+.+|+.++.. +. -....+....+|+++|+|+....       ...+......|+.|+..+++.+.
T Consensus        55 ~~~~~~~D~~d~~~-~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (280)
T PRK06914         55 NIKVQQLDVTDQNS-IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVL  124 (280)
T ss_pred             ceeEEecCCCCHHH-HHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45667778755321 00 01111222467999999985331       12345567899999998887764

>PRK05867 short chain dehydrogenase; Provisional

Probab=85.75  E-value=5.1  Score=28.95  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=28.6

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+.....       ......+.+|+.|+..+++.+..
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK  130 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHH
Confidence            4689999999864321       23445678999999999887754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=85.71  E-value=4.4  Score=29.61  Aligned_cols=73  Identities=15%  Similarity=0.170  Sum_probs=42.1

Q ss_pred             EEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeec-------c-h---hhHHHHHHhhhhcHHHHHHHHHHHh-c
Q psy3446          17 SAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVR-------F-D---EKIQLAVAINVLGVRAMLELAREIR-Q   81 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~-------~-~---~~~~~~~~~nv~gt~~ll~l~~~~~-~   81 (166)
                      .++.+|++++.- + +..++.+   ...+|+++|+|+...       + .   ..+...+.+|+.|...+.+.+.... +
T Consensus        61 ~~~~~Dv~~~~~-v-~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~  138 (260)
T PRK06603         61 FVSELDVTNPKS-I-SNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD  138 (260)
T ss_pred             eEEEccCCCHHH-H-HHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            467899999631 1 1112222   235899999998642       1 1   1234578899999888777554321 1


Q ss_pred             cchhhccccc
Q psy3446          82 LKLFLRLKTE   91 (166)
Q Consensus        82 ~~~~~~~ss~   91 (166)
                      ...++++++.
T Consensus       139 ~G~Iv~isS~  148 (260)
T PRK06603        139 GGSIVTLTYY  148 (260)
T ss_pred             CceEEEEecC
Confidence            2345555553

>PRK06181 short chain dehydrogenase; Provisional

Probab=85.66  E-value=6.2  Score=28.62  Aligned_cols=38  Identities=13%  Similarity=0.239  Sum_probs=28.2

Q ss_pred             cccEEEEccccccch--------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~--------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+.....        ..+......|+.|+.++++.+..
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  123 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP  123 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            689999999864321        11445688999999999888754

>PRK09072 short chain dehydrogenase; Provisional

Probab=85.64  E-value=4.5  Score=29.41  Aligned_cols=58  Identities=21%  Similarity=0.273  Sum_probs=38.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH------hccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l------~~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++.      ..+.+      ...+|+++|+|+...+.       ..+.....+|+.|+..+++.+..
T Consensus        54 ~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  124 (263)
T PRK09072         54 RHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP  124 (263)
T ss_pred             ceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4556677865432      22222      24689999999864331       23556778999999999888764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=85.49  E-value=5.2  Score=28.98  Aligned_cols=58  Identities=22%  Similarity=0.347  Sum_probs=37.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+..+      ...++++       ..+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        64 ~~~~~~~D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  135 (258)
T PRK06935         64 KVTFVQVDLTKP------ESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAK  135 (258)
T ss_pred             ceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            455667787542      2233332       368999999986431       223555788999999888776654

>PRK09291 short chain dehydrogenase; Provisional

Probab=85.49  E-value=5.7  Score=28.61  Aligned_cols=56  Identities=18%  Similarity=0.153  Sum_probs=35.7

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +..+.+|+.++      ..+.++.. ++|+++|+|+....       ...+...+.+|+.|+..+.+.+.
T Consensus        53 ~~~~~~D~~~~------~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  116 (257)
T PRK09291         53 LRVEKLDLTDA------IDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV  116 (257)
T ss_pred             ceEEEeeCCCH------HHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45566776443      33444443 79999999985321       12245577889999987766443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=85.42  E-value=3.6  Score=29.84  Aligned_cols=58  Identities=14%  Similarity=0.221  Sum_probs=38.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++      .+.+++.       ..+|+++|+|+....       ...+...+.+|+.|+..+.+.+..
T Consensus        56 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  127 (251)
T PRK12481         56 KFHFITADLIQQ------KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAK  127 (251)
T ss_pred             eEEEEEeCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHH
Confidence            455677787543      2233332       358999999985331       134556788999999988877654

>TIGR02415 23BDH acetoin reductases

Probab=85.31  E-value=4.8  Score=28.96  Aligned_cols=58  Identities=22%  Similarity=0.166  Sum_probs=37.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++.      ...++       ...+|++||+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        50 ~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  121 (254)
T TIGR02415        50 KAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAAR  121 (254)
T ss_pred             eEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4556677875432      22222       2357999999986321       133556788999999988776654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07063 short chain dehydrogenase; Provisional

Probab=85.29  E-value=6.6  Score=28.43  Aligned_cols=58  Identities=19%  Similarity=0.201  Sum_probs=37.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.+.++       ..+|+++|+|+...+       .........+|+.|+..+++.+..
T Consensus        59 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (260)
T PRK07063         59 RVLAVPADVTDA------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLP  130 (260)
T ss_pred             eEEEEEccCCCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            455667786543      2222222       368999999985322       124555788999999988887653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=85.29  E-value=4.9  Score=28.84  Aligned_cols=58  Identities=17%  Similarity=0.128  Sum_probs=37.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|++++      ...++++       ..+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        55 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (250)
T PRK08063         55 KALAVKANVGDV------EKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAK  126 (250)
T ss_pred             eEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455677887543      2233332       358999999985321       112344678999999999888865

>PRK06138 short chain dehydrogenase; Provisional

Probab=85.27  E-value=6.4  Score=28.22  Aligned_cols=57  Identities=23%  Similarity=0.168  Sum_probs=36.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..++.|+.++      ...+++.       ..+|+++|+|+....       ...+...+.+|+.|+..+.+.+.
T Consensus        54 ~~~~~~~D~~~~------~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (252)
T PRK06138         54 RAFARQGDVGSA------EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI  124 (252)
T ss_pred             eEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHH
Confidence            456677887543      2233322       368999999996431       12345568899999987766553

>PRK08303 short chain dehydrogenase; Provisional

Probab=85.24  E-value=4.1  Score=30.74  Aligned_cols=70  Identities=11%  Similarity=0.087  Sum_probs=41.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcc-eeec-------c-h---hhHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGA-ATVR-------F-D---EKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~a-a~~~-------~-~---~~~~~~~~~nv~gt~~ll~l   75 (166)
                      ++.++.+|++++.      +++.+.       ..+|++||+| +...       + .   ..+...+.+|+.|...+...
T Consensus        68 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  141 (305)
T PRK08303         68 RGIAVQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHF  141 (305)
T ss_pred             ceEEEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHH
Confidence            5778999999853      233322       3589999999 5321       1 1   12234677899888877665


Q ss_pred             HHHHh---ccchhhcccc
Q psy3446          76 AREIR---QLKLFLRLKT   90 (166)
Q Consensus        76 ~~~~~---~~~~~~~~ss   90 (166)
                      +....   ....++.++|
T Consensus       142 ~lp~m~~~~~g~IV~isS  159 (305)
T PRK08303        142 ALPLLIRRPGGLVVEITD  159 (305)
T ss_pred             HHHHhhhCCCcEEEEECC
Confidence            54321   1234555555

>PRK07890 short chain dehydrogenase; Provisional

Probab=85.13  E-value=5  Score=28.92  Aligned_cols=39  Identities=18%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....        ...+...+..|+.|+..+++.+..
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP  127 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            468999999985321        234566789999999999998865

>PRK05693 short chain dehydrogenase; Provisional

Probab=85.10  E-value=3.1  Score=30.49  Aligned_cols=39  Identities=15%  Similarity=0.185  Sum_probs=28.9

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+.....       ..+.....+|+.|+.++++.+..
T Consensus        71 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  116 (274)
T PRK05693         71 GGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP  116 (274)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4689999999853221       34556788999999998887744

>PRK05866 short chain dehydrogenase; Provisional

Probab=85.06  E-value=6.9  Score=29.24  Aligned_cols=57  Identities=14%  Similarity=0.103  Sum_probs=36.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +...+..|+.++      ..+++++       ..+|+++|+|+....         ...+...+.+|+.|+..+++.+.
T Consensus        90 ~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  162 (293)
T PRK05866         90 DAMAVPCDLSDL------DAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA  162 (293)
T ss_pred             cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345667786543      2333333       378999999986421         12345578899999988877653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=85.03  E-value=6.7  Score=28.26  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=27.1

Q ss_pred             ccccEEEEcccccc--------chHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~--------~~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      .++|.++|+|+...        ....+.....+|+.|+..+++.+.
T Consensus        73 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  118 (248)
T PRK10538         73 RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL  118 (248)
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            36899999998521        123456678999999887766654

>PRK08265 short chain dehydrogenase; Provisional

Probab=85.03  E-value=5  Score=29.24  Aligned_cols=58  Identities=16%  Similarity=0.147  Sum_probs=37.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEcccccc------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.+++.       ..+|+++|+|+...      -...+...+.+|+.|+..+++.+..
T Consensus        53 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  123 (261)
T PRK08265         53 RARFIATDITDD------AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHP  123 (261)
T ss_pred             eeEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            455677887543      2233322       35799999998532      1234556788999999988887654

>PRK07060 short chain dehydrogenase; Provisional

Probab=84.98  E-value=3.7  Score=29.36  Aligned_cols=39  Identities=13%  Similarity=0.187  Sum_probs=29.4

Q ss_pred             cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .+|++||+|+.....       .++......|+.|+..+++.+.+.
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (245)
T PRK07060         77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARA  122 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            589999999864321       245557789999999999888653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=84.96  E-value=6.6  Score=28.33  Aligned_cols=38  Identities=16%  Similarity=0.222  Sum_probs=28.3

Q ss_pred             cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVAR  130 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            58999999985321       234556889999999988887654

>PRK08226 short chain dehydrogenase; Provisional

Probab=84.95  E-value=5.2  Score=29.00  Aligned_cols=39  Identities=21%  Similarity=0.408  Sum_probs=28.4

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+....       ..........|+.|+..+++.+..
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP  126 (263)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            357999999995322       123445688999999999887754

>PRK06841 short chain dehydrogenase; Provisional

Probab=84.92  E-value=4.5  Score=29.17  Aligned_cols=39  Identities=15%  Similarity=0.291  Sum_probs=29.2

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+....       ...+.....+|+.|+.++++.+..
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  133 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR  133 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHH
Confidence            357999999986432       123455788999999999988765

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=84.90  E-value=5.5  Score=28.30  Aligned_cols=39  Identities=15%  Similarity=0.250  Sum_probs=28.5

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|.++|+|+.....       .........|+.|+.++++.+..
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  126 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALP  126 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3569999999864331       12455788999999999888753

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.85  E-value=7.8  Score=27.58  Aligned_cols=58  Identities=28%  Similarity=0.361  Sum_probs=37.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+.++.      ...+++       ..+|++||+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        56 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (247)
T PRK05565         56 DAIAVKADVSSEE------DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP  127 (247)
T ss_pred             eEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4556777875432      222222       268999999986522       123456788999999988877754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=84.57  E-value=5.3  Score=28.32  Aligned_cols=38  Identities=16%  Similarity=0.288  Sum_probs=28.9

Q ss_pred             cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|.++|+|+....       .......+..|+.|+..+++.+..
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  120 (239)
T TIGR01830        76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR  120 (239)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            57999999996431       133456788999999999988864

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08263 short chain dehydrogenase; Provisional

Probab=84.54  E-value=3.9  Score=30.04  Aligned_cols=38  Identities=11%  Similarity=0.218  Sum_probs=28.6

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|.+||+|+....       ...+...+.+|+.|+..+++.+.
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  120 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVL  120 (275)
T ss_pred             CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            467999999996532       13466688999999988877653

>PRK07454 short chain dehydrogenase; Provisional

Probab=84.46  E-value=4.5  Score=28.94  Aligned_cols=58  Identities=17%  Similarity=0.049  Sum_probs=37.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++.+|++++.      ..+++.       ..+|+++|+|+....       .........+|+.|+..+++.+..
T Consensus        56 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  127 (241)
T PRK07454         56 KAAAYSIDLSNPE------AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLP  127 (241)
T ss_pred             cEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4556778875432      222222       358999999985321       123555788999999988877643

>PRK07775 short chain dehydrogenase; Provisional

Probab=84.46  E-value=6.4  Score=28.93  Aligned_cols=39  Identities=21%  Similarity=0.397  Sum_probs=28.2

Q ss_pred             ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+.....       ..+...+..|+.|+.++++.+..
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~  131 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP  131 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3579999999864321       23445678999999999887653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=84.04  E-value=7.8  Score=27.55  Aligned_cols=62  Identities=23%  Similarity=0.240  Sum_probs=37.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH---hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l---~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.++.- +. ...+++   ...+|.++|+|+....       ...+......|+.|+..+++.+..
T Consensus        56 ~~~~~~~Dl~~~~~-~~-~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (248)
T PRK05557         56 KALAVQGDVSDAES-VE-RAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVAR  127 (248)
T ss_pred             ceEEEEcCCCCHHH-HH-HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667778754321 00 011111   2368999999985321       123455678899999999888865

>PRK07578 short chain dehydrogenase; Provisional

Probab=83.98  E-value=5.8  Score=27.49  Aligned_cols=39  Identities=18%  Similarity=0.434  Sum_probs=28.6

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .++|+++|+|+...+       .........+|+.|+.++++.+..
T Consensus        54 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   99 (199)
T PRK07578         54 GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH   99 (199)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            368999999985322       123455678899999999988754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=83.90  E-value=2.6  Score=30.12  Aligned_cols=59  Identities=12%  Similarity=0.149  Sum_probs=37.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .++++.+|+.+      ++.+.++++++|.||.+-+... ...        .....++++.|.+. +++.|++.+
T Consensus        44 g~~vv~~d~~~------~~~l~~al~g~d~v~~~~~~~~-~~~--------~~~~~~li~Aa~~a-gVk~~v~ss  102 (233)
T PF05368_consen   44 GAEVVEADYDD------PESLVAALKGVDAVFSVTPPSH-PSE--------LEQQKNLIDAAKAA-GVKHFVPSS  102 (233)
T ss_dssp             TTEEEES-TT-------HHHHHHHHTTCSEEEEESSCSC-CCH--------HHHHHHHHHHHHHH-T-SEEEESE
T ss_pred             cceEeecccCC------HHHHHHHHcCCceEEeecCcch-hhh--------hhhhhhHHHhhhcc-ccceEEEEE
Confidence            47889999987      4567888899999998776543 111        12335667777774 477776443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=83.79  E-value=6.9  Score=28.50  Aligned_cols=58  Identities=9%  Similarity=0.121  Sum_probs=37.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..++.|++++      ...++++       ..+|++||+|+....       ...+.....+|+.|+..+++.+..
T Consensus        60 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (265)
T PRK07097         60 EAHGYVCDVTDE------DGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP  131 (265)
T ss_pred             ceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            455667786443      2233332       348999999996431       123555778999999988777654

>PRK07478 short chain dehydrogenase; Provisional

Probab=83.75  E-value=6.2  Score=28.48  Aligned_cols=37  Identities=16%  Similarity=0.098  Sum_probs=26.2

Q ss_pred             cccEEEEccccccch--------HHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~--------~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      .+|++||+|+.....        ......+.+|+.|+..+.+.+.
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  127 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQI  127 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            689999999863211        2355678999999987766543

>PRK12743 oxidoreductase; Provisional

Probab=83.57  E-value=7.2  Score=28.23  Aligned_cols=39  Identities=13%  Similarity=0.186  Sum_probs=29.4

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  124 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAAR  124 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            358999999985331       123556788999999999987765

>KOG2774|consensus

Probab=83.52  E-value=0.24  Score=36.08  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=41.7

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeec-chh-hHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVR-FDE-KIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~-~~~-~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      -+|..|+.|.+ +     ++++.  ..+|..||..|..+ +|+ +...++++|+.|..++++.+.+. +.+.|+
T Consensus        90 PyIy~DILD~K-~-----L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV  156 (366)
T KOG2774|consen   90 PYIYLDILDQK-S-----LEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV  156 (366)
T ss_pred             Cchhhhhhccc-c-----HHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee
Confidence            35556665533 2     33332  35899999998754 333 23447889999999999999984 455443

>PRK07024 short chain dehydrogenase; Provisional

Probab=83.50  E-value=6.1  Score=28.64  Aligned_cols=56  Identities=16%  Similarity=0.078  Sum_probs=36.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+..|++++      ..+.++.       ..+|+++|+|+....        ...+.....+|+.|+..+++..
T Consensus        51 ~~~~~~~Dl~~~------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~  121 (257)
T PRK07024         51 RVSVYAADVRDA------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPF  121 (257)
T ss_pred             eeEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHH
Confidence            455677887543      2232222       347999999985321        1345668899999999887743

>PRK12827 short chain dehydrogenase; Provisional

Probab=83.45  E-value=8.9  Score=27.32  Aligned_cols=38  Identities=13%  Similarity=0.146  Sum_probs=29.0

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|.+||+|+....       ...+......|+.|+..+++.+.
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence            358999999986431       12345577899999999999987

>PRK09242 tropinone reductase; Provisional

Probab=83.36  E-value=6.9  Score=28.30  Aligned_cols=64  Identities=13%  Similarity=0.045  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCC-HHhHHHHhccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLS-ETDRELLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls-~~~~~~l~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+..+.--.. .....+....+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  132 (257)
T PRK09242         61 EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHP  132 (257)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            55667788754320000 01112222468999999985221       234566788999999999888753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=83.14  E-value=6.2  Score=28.54  Aligned_cols=39  Identities=18%  Similarity=0.235  Sum_probs=29.2

Q ss_pred             ccccEEEEccccccc---h---HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF---D---EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~---~---~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....   .   ......+.+|+.|+..+++.+..
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAP  131 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            457999999985321   1   34555688999999999998863

>PRK07576 short chain dehydrogenase; Provisional

Probab=83.09  E-value=7.5  Score=28.39  Aligned_cols=39  Identities=26%  Similarity=0.302  Sum_probs=28.2

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+....       ...+...+.+|+.|+.++++.+..
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  130 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP  130 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            357999999974221       223556788999999999887754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=82.68  E-value=9.2  Score=28.02  Aligned_cols=38  Identities=16%  Similarity=0.296  Sum_probs=26.9

Q ss_pred             ccccEEEEccccccc----------------------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF----------------------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~----------------------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|++||+|+....                      ...+...+.+|+.|+..+++.+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  145 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFA  145 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            468999999984321                      12356678899999987766554

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=82.61  E-value=7.3  Score=27.98  Aligned_cols=57  Identities=23%  Similarity=0.131  Sum_probs=34.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+..+      ....++.       ..+|++||+|+....       .......+.+|+.|+..+++.+.
T Consensus        54 ~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (258)
T PRK12429         54 KAIGVAMDVTDE------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL  124 (258)
T ss_pred             cEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence            455667786443      2233322       368999999985332       12344567889999776655554

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=82.34  E-value=7.8  Score=27.78  Aligned_cols=37  Identities=16%  Similarity=0.081  Sum_probs=27.5

Q ss_pred             ccEEEEcccccc---------c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         125 VNVIFHGAATVR---------F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       125 ~d~i~h~aa~~~---------~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +|+++|+|+...         +    ...+...+.+|+.|+..+++.+..
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALP  131 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            899999997421         1    123455789999999999988864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=82.31  E-value=18  Score=26.93  Aligned_cols=56  Identities=18%  Similarity=0.352  Sum_probs=37.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh----c---cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR----T---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~----~---~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..++.|++++.      +.+++.    .   .+|+++++|+.-.++       ........+|+.++..+-.+.
T Consensus        57 ~v~vi~~DLs~~~------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~  126 (265)
T COG0300          57 EVEVIPADLSDPE------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV  126 (265)
T ss_pred             eEEEEECcCCChh------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHH
Confidence            5567788887652      233332    2   599999999975443       235558899999998875544

>PRK05855 short chain dehydrogenase; Validated

Probab=82.25  E-value=7  Score=31.84  Aligned_cols=37  Identities=16%  Similarity=0.131  Sum_probs=27.7

Q ss_pred             cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       124 ~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      .+|+++|+|+....       ...+...+.+|+.|+.++++.+.
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~  435 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFG  435 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            48999999996432       12455678899999999887654

>PRK06198 short chain dehydrogenase; Provisional

Probab=82.20  E-value=8.1  Score=27.89  Aligned_cols=39  Identities=15%  Similarity=0.135  Sum_probs=28.7

Q ss_pred             ccccEEEEcccccc-------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVR-------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~-------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+...       -...+.....+|+.|+..+++.+..
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  128 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK  128 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            35899999998532       1223455788999999999888755

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=82.19  E-value=5.4  Score=28.38  Aligned_cols=61  Identities=10%  Similarity=0.018  Sum_probs=38.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch-------------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-------------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~-------------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..++.|++++.   +.....+...++|++||+|+.....             ..+.....+|+.|+..+++.+..
T Consensus        44 ~~~~~~~Dls~~~---~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  117 (235)
T PRK09009         44 NVQWHALDVTDEA---EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP  117 (235)
T ss_pred             ceEEEEecCCCHH---HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            4556777865432   1111222235789999999975321             12445788899999888777654

>PRK12744 short chain dehydrogenase; Provisional

Probab=82.12  E-value=9.3  Score=27.64  Aligned_cols=39  Identities=10%  Similarity=0.108  Sum_probs=28.7

Q ss_pred             ccccEEEEcccccc------c-hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVR------F-DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~------~-~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|++||+|+...      . ...+...+.+|+.|+..+++.+..
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  133 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            36899999998521      1 123556788999999998887754

>PRK05599 hypothetical protein; Provisional

Probab=81.98  E-value=7.1  Score=28.21  Aligned_cols=76  Identities=5%  Similarity=0.006  Sum_probs=41.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecchh-------hHHHHHHhhhhcHHHHHHHHHH-H--h-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFDE-------KIQLAVAINVLGVRAMLELARE-I--R-   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~~-------~~~~~~~~nv~gt~~ll~l~~~-~--~-   80 (166)
                      ++.++.+|++++.- + ...++.+   ...+|++||+|+......       .......+|+.+...+...+.. .  . 
T Consensus        50 ~~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~  127 (246)
T PRK05599         50 SVHVLSFDAQDLDT-H-RELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT  127 (246)
T ss_pred             ceEEEEcccCCHHH-H-HHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC
Confidence            47889999999642 1 1112222   236899999998743211       1123456787777665544322 1  1 


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      ....++.+||..
T Consensus       128 ~~g~Iv~isS~~  139 (246)
T PRK05599        128 APAAIVAFSSIA  139 (246)
T ss_pred             CCCEEEEEeccc
Confidence            123456666643

>PRK08219 short chain dehydrogenase; Provisional

Probab=81.92  E-value=9.4  Score=26.81  Aligned_cols=55  Identities=15%  Similarity=0.268  Sum_probs=34.4

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc---cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~---~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      +.++.+|+.++      ..++++.+   .+|.|+|+++.....       ......+..|+.|+..+.+.+
T Consensus        49 ~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  113 (227)
T PRK08219         49 ATPFPVDLTDP------EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL  113 (227)
T ss_pred             ceEEecCCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            45667887542      34455544   589999999864321       234556888999966554443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=81.85  E-value=6.4  Score=28.19  Aligned_cols=39  Identities=13%  Similarity=0.189  Sum_probs=28.1

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  125 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVID  125 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            468999999986421       234566789999998887766543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=81.78  E-value=10  Score=27.19  Aligned_cols=70  Identities=14%  Similarity=0.141  Sum_probs=44.5

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHH-------h-cCccEEEEcceeecc---h--------hhHHHHHHhhhhcHHHHHHHH
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELL-------R-TNVNVIFHGAATVRF---D--------EKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~-------~-~~~d~Vih~aa~~~~---~--------~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .+++.+|++++      +.++.+       . ..+|+++|+++....   .        ..+...+++|+.+...+.+.+
T Consensus        46 ~~~~~~D~~~~------~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (241)
T PF13561_consen   46 AEVIQCDLSDE------ESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAA  119 (241)
T ss_dssp             SEEEESCTTSH------HHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEeecCcch------HHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34699999985      334433       4 568999999987543   1        123457888999988888776


Q ss_pred             HHHh-ccchhhccccc
Q psy3446          77 REIR-QLKLFLRLKTE   91 (166)
Q Consensus        77 ~~~~-~~~~~~~~ss~   91 (166)
                      .... +...++.+++.
T Consensus       120 ~~~~~~~gsii~iss~  135 (241)
T PF13561_consen  120 LPLMKKGGSIINISSI  135 (241)
T ss_dssp             HHHHHHEEEEEEEEEG
T ss_pred             HHHHhhCCCcccccch
Confidence            5431 22334455443

...

>PRK06114 short chain dehydrogenase; Provisional

Probab=81.67  E-value=6.1  Score=28.59  Aligned_cols=38  Identities=18%  Similarity=0.211  Sum_probs=27.5

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+|++||+|+....       ...+...+.+|+.|+..+++.+.
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEA  129 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence            457999999986432       12356678899999988777654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=81.64  E-value=2.9  Score=30.46  Aligned_cols=39  Identities=18%  Similarity=0.231  Sum_probs=28.7

Q ss_pred             ccccEEEEccccccch------------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD------------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~------------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+.....            ......+.+|+.|+..+++.+..
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  128 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP  128 (262)
T ss_pred             CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence            4679999999853211            12456788999999999888865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09186 flagellin modification protein A; Provisional

Probab=81.52  E-value=7.4  Score=27.99  Aligned_cols=57  Identities=9%  Similarity=-0.014  Sum_probs=34.3

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc----------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF----------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~----------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +.++..|+.++      ..+.++.       ..+|++||+|+....          ...+.....+|+.|+..+++.+..
T Consensus        57 ~~~~~~Dl~d~------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (256)
T PRK09186         57 LSLVELDITDQ------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAK  130 (256)
T ss_pred             eeEEEecCCCH------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            44557787543      2333333       238999999963210          123455678899999877666543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=81.51  E-value=7.3  Score=28.16  Aligned_cols=39  Identities=10%  Similarity=0.118  Sum_probs=27.9

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+...+.+|+.|+..+++.+..
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (259)
T PRK12384         80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSR  125 (259)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            457999999985321       123556788999999888776654

>PRK07985 oxidoreductase; Provisional

Probab=81.09  E-value=9.5  Score=28.47  Aligned_cols=39  Identities=21%  Similarity=0.180  Sum_probs=28.9

Q ss_pred             ccccEEEEcccccc----c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~----~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+...    +    ...+...+.+|+.|+..+++.+..
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  173 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP  173 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45799999998521    1    123556789999999999888764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=81.01  E-value=6.7  Score=31.19  Aligned_cols=38  Identities=18%  Similarity=0.309  Sum_probs=29.6

Q ss_pred             cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|++||+|+....       .......+.+|+.|+.++.+.+..
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  328 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLA  328 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            58999999985421       234566788999999999998876

>PRK06197 short chain dehydrogenase; Provisional

Probab=80.80  E-value=5.3  Score=29.88  Aligned_cols=58  Identities=14%  Similarity=0.185  Sum_probs=34.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-----HHHHHHHHHHHHHHHH----HHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-----EKIQLAVAINVLGVRA----MLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-----~~~~~~~~~Nv~G~~~----~l~~a~~  161 (166)
                      ++..+..|+.++      ...++++       ..+|++||+|+.....     ......+.+|+.|+..    +++.+++
T Consensus        68 ~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~  141 (306)
T PRK06197         68 DVTLQELDLTSL------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP  141 (306)
T ss_pred             ceEEEECCCCCH------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh
Confidence            455667787543      2233332       3589999999864321     1235567899999554    5554443

>KOG2774|consensus

Probab=80.73  E-value=0.34  Score=35.36  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=31.6

Q ss_pred             ccccEEEEcccccc-chH-HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         123 TNVNVIFHGAATVR-FDE-KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       123 ~~~d~i~h~aa~~~-~~~-~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ..+|.++|..|..+ ++. ....++.+|+.|..|++++|.+.+
T Consensus       109 ~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k  151 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK  151 (366)
T ss_pred             cccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC
Confidence            46899999988654 222 344478999999999999998754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=80.66  E-value=9.9  Score=27.22  Aligned_cols=39  Identities=13%  Similarity=0.264  Sum_probs=29.0

Q ss_pred             ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  124 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAK  124 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            458999999986431       124556788999999999887754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08862 short chain dehydrogenase; Provisional

Probab=80.62  E-value=12  Score=26.80  Aligned_cols=59  Identities=3%  Similarity=-0.079  Sum_probs=33.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hc-CccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RT-NVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~-~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l   75 (166)
                      ++..+..|++++.- + ...++.+   .. .+|++||+|+.....        ..+...+.+|+.+...+...
T Consensus        55 ~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (227)
T PRK08862         55 NVYSFQLKDFSQES-I-RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQV  125 (227)
T ss_pred             CeEEEEccCCCHHH-H-HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHH
Confidence            56788899988531 1 1111222   23 689999999743221        12233566777776665543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=80.36  E-value=3.8  Score=31.39  Aligned_cols=46  Identities=20%  Similarity=0.014  Sum_probs=32.7

Q ss_pred             hHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          34 DRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        34 ~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.+.+.++|+|||+|+...- +.+..+.+..|+.=.+.+.....+.
T Consensus        71 ~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          71 DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            344556899999999998654 4444667888887667666655554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=80.20  E-value=4  Score=29.67  Aligned_cols=39  Identities=13%  Similarity=0.093  Sum_probs=27.6

Q ss_pred             ccccEEEEccccccch-----HH-------HHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFD-----EK-------IQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~-----~~-------~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++|+|+.....     .+       ....+.+|+.|+..+++.+..
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP  129 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence            3589999999853211     11       344567899999998888764

>PRK07677 short chain dehydrogenase; Provisional

Probab=80.11  E-value=10  Score=27.33  Aligned_cols=58  Identities=16%  Similarity=0.132  Sum_probs=37.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      ..++++       ...+|+++|+|+....       ...+.....+|+.|+..+++.+..
T Consensus        51 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  122 (252)
T PRK07677         51 QVLTVQMDVRNP------EDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGK  122 (252)
T ss_pred             cEEEEEecCCCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            455677786543      223222       2468999999984221       122455789999999999888854

>PRK06139 short chain dehydrogenase; Provisional

Probab=80.07  E-value=11  Score=28.72  Aligned_cols=57  Identities=16%  Similarity=0.166  Sum_probs=36.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|++++      .++++++       ..+|++||+|+...+.       ........+|+.|+..+.+.+.
T Consensus        57 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~l  127 (330)
T PRK06139         57 EVLVVPTDVTDA------DQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAAL  127 (330)
T ss_pred             cEEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence            344566776442      2333333       4689999999853321       2345578899999998877764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	166
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-19
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-18
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	9e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-04

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 81.5 bits (201), Expect = 6e-19
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%)

Query: 69  VRAMLELAREIRQLKLFLR-----LKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRT 123
           VRA  +     R  K F       L+       +++  VAGD S P LGL +     L  
Sbjct: 107 VRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAE 166

Query: 124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR 163
            V++I   AA V      +L    NV G   ++ +A   +
Sbjct: 167 TVDLIVDSAAMVNAFPYHEL-FGPNVAGTAELIRIALTTK 205

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 80.7 bits (199), Expect = 1e-18
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 1   LFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQL 60
               L+       +++  VAGD S P LGL +     L   V++I   AA V      +L
Sbjct: 127 DPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHEL 186

Query: 61  AVAINVLGVRAMLELAREIR 80
               NV G   ++ +A   +
Sbjct: 187 -FGPNVAGTAELIRIALTTK 205

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 16/79 (20%)

Query: 14  EKISAVAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAA--TVRFDEKIQLAVAINV 66
             I  +  DV         ++R+ +       +++ IFH A   + + ++   LA  +N+
Sbjct: 39  GGIKFITLDV---------SNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNM 89

Query: 67  LGVRAMLELAREIRQLKLF 85
            G   +LE A++ R  K+ 
Sbjct: 90  NGTYNILEAAKQHRVEKVV 108

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 16/72 (22%)

Query: 97  EKISAVAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAA--TVRFDEKIQLAVAINV 149
             I  +  DV         ++R+ +       +++ IFH A   + + ++   LA  +N+
Sbjct: 39  GGIKFITLDV---------SNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNM 89

Query: 150 LGVRAMLELARE 161
            G   +LE A++
Sbjct: 90  NGTYNILEAAKQ 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.03
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.99
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.85
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.85
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.84
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.84
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.82
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.81
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.8
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.79
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	98.79
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.78
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.77
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.76
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.74
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.73
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.73
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.72
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.72
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.72
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.71
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.7
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.69
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.69
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.67
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.67
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.66
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.66
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.65
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.65
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.64
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.63
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.63
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.61
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.6
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.59
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.59
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	98.58
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.57
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	98.57
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.56
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.55
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.55
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	98.51
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.5
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.49
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.47
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.44
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.42
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.42
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.38
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.37
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.35
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.35
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.34
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.32
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.32
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.3
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.29
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.23
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.21
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.19
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.11
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	97.98
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.95
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.92
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.9
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.87
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.82
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.8
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.77
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.75
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.74
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.73
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	97.72
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.72
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.71
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.7
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.67
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.63
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.62
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	97.62
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.62
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.61
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.6
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.58
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.57
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.57
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.57
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.55
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.55
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.55
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.54
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.53
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.53
1spx_A	278	Short-chain reductase family member (5L265); paral	97.52
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.52
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.52
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.51
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.49
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.48
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.47
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.47
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.46
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.46
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.46
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.46
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.45
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.44
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.43
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.43
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.43
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.43
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.43
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.42
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.42
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.42
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.42
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.42
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.41
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.4
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.38
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.38
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	97.38
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.38
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.37
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.37
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.36
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.36
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.36
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.36
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.35
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.35
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.34
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.34
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.34
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.32
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.32
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.31
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.31
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.31
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.31
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.31
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.3
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.3
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.3
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.3
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.29
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.29
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.29
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.29
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.29
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.29
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.28
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.28
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.28
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.27
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.27
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	97.26
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.26
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.26
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.26
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.26
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.26
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.25
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.25
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.25
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.24
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.24
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.24
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.23
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.23
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.23
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.23
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.22
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.22
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.21
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.21
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.2
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.2
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.2
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.2
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.2
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.2
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.2
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.2
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.19
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.18
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.17
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.17
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.17
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.17
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.17
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.16
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.16
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.16
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.15
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.15
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.15
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.14
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.14
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.14
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.14
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.14
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.14
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.14
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.14
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.14
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.13
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.13
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.12
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	97.12
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.12
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.12
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.12
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.11
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.11
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.1
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.1
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.1
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.09
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.07
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.07
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.06
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.06
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.05
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.05
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.04
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.04
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.04
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.04
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.03
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.03
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.03
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.03
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.02
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.02
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.01
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.01
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.01
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.01
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.99
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.99
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.99
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.98
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.98
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.98
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.97
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.97
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.96
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.95
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.95
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	96.93
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	96.91
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.91
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	96.91
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.91
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	96.9
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.89
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.88
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.88
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.87
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.87
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.86
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.86
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.85
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.84
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.82
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.82
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	96.8
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.79
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.78
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	96.77
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.75
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.75
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	96.73
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.72
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.72
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.71
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.7
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.69
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.69
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.69
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	96.68
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.67
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.67
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.66
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.65
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.64
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.63
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.62
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.59
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.58
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.56
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	96.56
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.54
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.54
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.53
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	96.51
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.51
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	96.5
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	96.48
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.46
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.44
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.39
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	96.32
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	96.28
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.25
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.25
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.24
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.14
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	96.02
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.82
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.82
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.81
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.77
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	95.74
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	95.71
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.52
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	95.52
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.51
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	95.47
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	95.45
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.45
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.43
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	95.4
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.37
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.24
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.21
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	95.16
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.1
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.05
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.04
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	94.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	94.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	94.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	94.91
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	94.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	94.88
1spx_A	278	Short-chain reductase family member (5L265); paral	94.82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	94.76
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	94.76
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	94.73
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.7
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.64
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	94.62
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	94.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	94.6
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	94.59
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	94.53
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	94.52
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	94.51
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	94.51
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	94.5
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.38
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	94.33
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	94.31
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	94.28
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	94.25
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	94.25
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	94.22
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	94.2
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	94.19
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	94.19
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.14
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	94.13
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	94.09
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	94.07
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	94.04
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	94.01
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	93.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	93.97
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	93.96
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	93.94
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	93.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	93.92
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	93.91
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	93.88
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	93.84
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	93.83
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	93.79
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	93.78
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	93.78
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	93.75
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	93.73
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	93.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	93.72
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	93.71
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	93.71
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	93.69
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	93.63
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	93.63
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	93.62
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	93.62
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	93.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	93.61
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	93.59
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	93.58
1xq1_A	266	Putative tropinone reducatse; structural genomics,	93.57
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	93.49
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	93.48
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	93.47
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	93.42
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	93.41
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.38
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	93.29
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	93.27
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	93.27
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.23
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	93.2
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	93.14
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	93.13
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	93.12
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	93.1
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	93.09
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	93.07
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	93.06
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	93.05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	93.05
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	93.04
1xkq_A	280	Short-chain reductase family member (5D234); parra	93.03
3imf_A	257	Short chain dehydrogenase; structural genomics, in	93.01
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	93.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	92.98
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	92.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	92.95
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	92.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	92.93
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	92.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	92.89
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	92.89
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	92.88
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	92.87
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	92.84
1xhl_A	297	Short-chain dehydrogenase/reductase family member	92.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	92.82
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	92.78
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	92.77
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	92.77
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	92.76
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	92.73
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	92.72
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	92.71
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	92.71
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	92.69
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	92.64
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	92.64
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	92.64
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	92.63
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	92.62
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	92.6
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	92.59
4dqx_A	277	Probable oxidoreductase protein; structural genomi	92.57
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	92.56
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	92.55
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	92.54
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	92.53
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	92.51

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.03  E-value=1.8e-11  Score=96.14  Aligned_cols=80  Identities=29%  Similarity=0.336  Sum_probs=69.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.||++++.+|++.+.+..+.+++|+|||+||...+ .++...+++|+.|+.+++++|++ .+.++|+++||..+
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~-~~~~~~V~iSS~~v  217 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADV  217 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTS-SSCCCEEEEEEGGG
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeehhh
Confidence            58999999999999999999999999999999999999887 55556788999999999999987 45678999999766


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      +.
T Consensus       218 ~~  219 (478)
T 4dqv_A          218 GA  219 (478)
T ss_dssp             GT
T ss_pred             cC
Confidence            54

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.99  E-value=2e-09  Score=80.81  Aligned_cols=98  Identities=18%  Similarity=0.115  Sum_probs=70.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..+++++|+|||+||......+   ....+.+|+.|+.++++.|++. +.++|+++||
T Consensus        79 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS  151 (351)
T 3ruf_A           79 SRFCFIEGDIRDL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAAS  151 (351)
T ss_dssp             TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred             CceEEEEccCCCH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEec
Confidence            5799999999984      5578888899999999998654433   3457899999999999999874 5678999999


Q ss_pred             cCccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          91 EVPHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      ..+++.....++.++  .+..+.+.|...|
T Consensus       152 ~~vyg~~~~~~~~E~--~~~~p~~~Y~~sK  179 (351)
T 3ruf_A          152 SSTYGDHPALPKVEE--NIGNPLSPYAVTK  179 (351)
T ss_dssp             GGGGTTCCCSSBCTT--CCCCCCSHHHHHH
T ss_pred             HHhcCCCCCCCCccC--CCCCCCChhHHHH
Confidence            877654433344444  2333344444333

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.90  E-value=5.2e-09  Score=78.40  Aligned_cols=85  Identities=18%  Similarity=0.139  Sum_probs=66.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhh-HHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEK-IQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~-~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++      +.+..++.++|+|||+||....... ....+++|+.|+.++++.+++ .+.++++++||..
T Consensus        56 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS~~  128 (347)
T 4id9_A           56 TGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASSGE  128 (347)
T ss_dssp             SCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEEGG
T ss_pred             CCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHH
Confidence            4688999999984      4577888899999999998766443 366889999999999999987 4567899999987


Q ss_pred             ccce--eeeEeecCC
Q psy3446          93 PHFL--EKISAVAGD  105 (166)
Q Consensus        93 ~~~~--~~~~~v~gD  105 (166)
                      +++.  ....++.++
T Consensus       129 vyg~~~~~~~~~~E~  143 (347)
T 4id9_A          129 VYPENRPEFLPVTED  143 (347)
T ss_dssp             GTTTTSCSSSSBCTT
T ss_pred             HhCCCCCCCCCcCCC
Confidence            7654  333344444

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.89  E-value=4e-09  Score=79.01  Aligned_cols=76  Identities=22%  Similarity=0.169  Sum_probs=58.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||.....   ......+++|+.|+.++++.|++. +.++++++
T Consensus        75 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~  147 (346)
T 4egb_A           75 PNYYFVKGEIQNG------ELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQV  147 (346)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEE
T ss_pred             CCeEEEEcCCCCH------HHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence            4799999999984      456777766  99999999987654   333457899999999999999884 56779999


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||..+++.
T Consensus       148 SS~~vy~~  155 (346)
T 4egb_A          148 STDEVYGS  155 (346)
T ss_dssp             EEGGGGCC
T ss_pred             CchHHhCC
Confidence            99877654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.85  E-value=1.2e-08  Score=76.95  Aligned_cols=95  Identities=19%  Similarity=0.098  Sum_probs=68.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-hcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-RTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +++++.+|++++      +.+..+ ..++|+|||+||.... .......+++|+.|+.++++.+++. +.+ ++++||..
T Consensus        69 ~~~~~~~Dl~d~------~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~  140 (362)
T 3sxp_A           69 KGEVIAADINNP------LDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG  140 (362)
T ss_dssp             CSEEEECCTTCH------HHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG
T ss_pred             CceEEECCCCCH------HHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH
Confidence            579999999984      456777 6789999999997764 3455678999999999999999874 445 99999977


Q ss_pred             ccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          93 PHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        93 ~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      +++.... ++.++  .+..+.+.|...|
T Consensus       141 vyg~~~~-~~~E~--~~~~p~~~Y~~sK  165 (362)
T 3sxp_A          141 VYGNTKA-PNVVG--KNESPENVYGFSK  165 (362)
T ss_dssp             GGCSCCS-SBCTT--SCCCCSSHHHHHH
T ss_pred             HhCCCCC-CCCCC--CCCCCCChhHHHH
Confidence            7654433 44444  2333344444333

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.85  E-value=1.3e-08  Score=76.50  Aligned_cols=76  Identities=20%  Similarity=0.155  Sum_probs=61.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+.++++++|+|||+||.....   ..+...+++|+.|+.++++.|++. +.++++++||
T Consensus        81 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS  153 (352)
T 1sb8_A           81 SNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAAS  153 (352)
T ss_dssp             TTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred             CceEEEECCCCCH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence            4789999999984      45777888999999999986543   334567899999999999999873 5667899999


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       154 ~~~~~~  159 (352)
T 1sb8_A          154 SSTYGD  159 (352)
T ss_dssp             GGGGTT
T ss_pred             HHhcCC
Confidence            877643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.84  E-value=1.1e-08  Score=76.45  Aligned_cols=75  Identities=20%  Similarity=0.166  Sum_probs=60.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..++.++|+|||+||......   .....+++|+.|+.++++.+++. ..++++++||
T Consensus        55 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS  127 (337)
T 1r6d_A           55 PRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVST  127 (337)
T ss_dssp             TTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred             CCeEEEEcCCCCH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecc
Confidence            4789999999984      457777789999999999865432   33567899999999999999874 4568899999


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..+++
T Consensus       128 ~~vyg  132 (337)
T 1r6d_A          128 NQVYG  132 (337)
T ss_dssp             GGGGC
T ss_pred             hHHhC
Confidence            77654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.84  E-value=1.2e-08  Score=76.12  Aligned_cols=77  Identities=23%  Similarity=0.188  Sum_probs=60.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..++.++|+|||+||......   .....+++|+.|+.++++.|.+.....+++++||
T Consensus        54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS  127 (336)
T 2hun_A           54 PRYTFVKGDVADY------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST  127 (336)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred             CceEEEEcCCCCH------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence            4689999999984      456777789999999999865432   3356789999999999999988532357899999


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       128 ~~vyg~  133 (336)
T 2hun_A          128 DEVYGD  133 (336)
T ss_dssp             GGGGCC
T ss_pred             HHHHCC
Confidence            776543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.83  E-value=1.2e-08  Score=75.62  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=59.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+..+.++  +|+|||+||......   .+...+++|+.|+.++++.|++..+..+++++|
T Consensus        52 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  125 (321)
T 2pk3_A           52 NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG  125 (321)
T ss_dssp             TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred             eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence            688999999984      446666654  899999999876432   456688999999999999997643467899999


Q ss_pred             ccCccce
Q psy3446          90 TEVPHFL   96 (166)
Q Consensus        90 s~~~~~~   96 (166)
                      |..+++.
T Consensus       126 S~~v~g~  132 (321)
T 2pk3_A          126 SSEEYGM  132 (321)
T ss_dssp             EGGGTBS
T ss_pred             cHHhcCC
Confidence            9876643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.83  E-value=4.1e-09  Score=77.96  Aligned_cols=83  Identities=13%  Similarity=-0.039  Sum_probs=64.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++ +      +.+.++++++|+|||+||..... .....+++|+.|+.++++.+++. +.++++++||..+
T Consensus        42 ~~~~~~~~Dl~-~------~~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~v  112 (311)
T 3m2p_A           42 NDYEYRVSDYT-L------EDLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISA  112 (311)
T ss_dssp             -CCEEEECCCC-H------HHHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGG
T ss_pred             CceEEEEcccc-H------HHHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHH
Confidence            37899999998 5      34777888999999999987765 44556789999999999999874 5677999999877


Q ss_pred             cceeeeEeecCC
Q psy3446          94 HFLEKISAVAGD  105 (166)
Q Consensus        94 ~~~~~~~~v~gD  105 (166)
                      ++.....++.++
T Consensus       113 yg~~~~~~~~E~  124 (311)
T 3m2p_A          113 YSDETSLPWNEK  124 (311)
T ss_dssp             CCCGGGCSBCTT
T ss_pred             hCCCCCCCCCCC
Confidence            654443444444

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.82  E-value=1.8e-08  Score=74.50  Aligned_cols=97  Identities=19%  Similarity=0.102  Sum_probs=69.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|+++..       +..+++++|+|||+|+....   ...+...+++|+.|+.++++.+++. +.++++++||
T Consensus        43 ~~~~~~~~Dl~~~~-------~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS  114 (313)
T 3ehe_A           43 EAARLVKADLAADD-------IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTST  114 (313)
T ss_dssp             TTEEEECCCTTTSC-------CHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             CCcEEEECcCChHH-------HHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCc
Confidence            56899999999843       36667899999999996543   2345678899999999999999874 4668999999


Q ss_pred             cCccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          91 EVPHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      ..+++.....++.++  .+..+.+.|...|
T Consensus       115 ~~vyg~~~~~~~~E~--~~~~~~~~Y~~sK  142 (313)
T 3ehe_A          115 STVYGEAKVIPTPED--YPTHPISLYGASK  142 (313)
T ss_dssp             GGGGCSCSSSSBCTT--SCCCCCSHHHHHH
T ss_pred             hHHhCcCCCCCCCCC--CCCCCCCHHHHHH
Confidence            877765444455454  2333444444433

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.81  E-value=2.6e-08  Score=72.23  Aligned_cols=73  Identities=12%  Similarity=0.109  Sum_probs=60.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+.+++|+|||+||... ..++...+++|+.|+.++++.+++. +..+++++||...
T Consensus        43 ~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~  114 (267)
T 3rft_A           43 PNEECVQCDLADA------NAVNAMVAGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHT  114 (267)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGG
T ss_pred             CCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHH
Confidence            5789999999984      567888899999999999853 4456778999999999999999874 5567889998766


Q ss_pred             c
Q psy3446          94 H   94 (166)
Q Consensus        94 ~   94 (166)
                      +
T Consensus       115 ~  115 (267)
T 3rft_A          115 I  115 (267)
T ss_dssp             G
T ss_pred             h
Confidence            5

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.80  E-value=1.7e-08  Score=74.98  Aligned_cols=84  Identities=20%  Similarity=0.150  Sum_probs=62.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+.++.+  ++|+|||+||.....   ......+++|+.|+.++++.+++. +.++++++|
T Consensus        45 ~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~S  117 (330)
T 2c20_A           45 GAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSS  117 (330)
T ss_dssp             TSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeC
Confidence            688999999984      44666666  899999999987543   244567899999999999999873 556788999


Q ss_pred             ccCccceeeeEeecCC
Q psy3446          90 TEVPHFLEKISAVAGD  105 (166)
Q Consensus        90 s~~~~~~~~~~~v~gD  105 (166)
                      |..+++.....++.++
T Consensus       118 s~~~~~~~~~~~~~E~  133 (330)
T 2c20_A          118 TAATYGEVDVDLITEE  133 (330)
T ss_dssp             CGGGGCSCSSSSBCTT
T ss_pred             CceeeCCCCCCCCCcC
Confidence            9877654332334343

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.79  E-value=1.7e-08  Score=75.46  Aligned_cols=77  Identities=26%  Similarity=0.238  Sum_probs=59.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-cCccEEEEcceeecc--hhhHHHHHHhhhhcHHHHHHHHHHHh----ccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-TNVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREIR----QLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-~~~d~Vih~aa~~~~--~~~~~~~~~~nv~gt~~ll~l~~~~~----~~~~~~   86 (166)
                      .+++++.+|++++.      .+..+. .++|+|||+||....  ...+...+++|+.|+.++++.+++..    ...+++
T Consensus        64 ~~~~~~~~Dl~d~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv  137 (342)
T 2hrz_A           64 GAVDARAADLSAPG------EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVV  137 (342)
T ss_dssp             SEEEEEECCTTSTT------HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred             CceeEEEcCCCCHH------HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEE
Confidence            46889999999864      356665 489999999997652  23455678999999999999998743    256789


Q ss_pred             cccccCccce
Q psy3446          87 RLKTEVPHFL   96 (166)
Q Consensus        87 ~~ss~~~~~~   96 (166)
                      ++||..+++.
T Consensus       138 ~~SS~~~~~~  147 (342)
T 2hrz_A          138 FTSSIAVFGA  147 (342)
T ss_dssp             EEEEGGGCCS
T ss_pred             EeCchHhhCC
Confidence            9999877653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=98.79  E-value=1.3e-08  Score=76.97  Aligned_cols=76  Identities=13%  Similarity=0.025  Sum_probs=61.3

Q ss_pred             cceEEEecCCC-CCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVS-LPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~-~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++ +      .+.+..+++++|+|||+||......   .....+++|+.|+.++++.|++..  ++++++|
T Consensus        69 ~~v~~~~~Dl~~d------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~S  140 (372)
T 3slg_A           69 ERMHFFEGDITIN------KEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPS  140 (372)
T ss_dssp             TTEEEEECCTTTC------HHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEEC
T ss_pred             CCeEEEeCccCCC------HHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeC
Confidence            57999999999 5      3456777789999999999876543   345678999999999999998854  6899999


Q ss_pred             ccCcccee
Q psy3446          90 TEVPHFLE   97 (166)
Q Consensus        90 s~~~~~~~   97 (166)
                      |..+++..
T Consensus       141 S~~vyg~~  148 (372)
T 3slg_A          141 TSEVYGMC  148 (372)
T ss_dssp             CGGGGBSC
T ss_pred             cHHHhCCC
Confidence            98776543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.78  E-value=2.3e-08  Score=74.68  Aligned_cols=85  Identities=15%  Similarity=0.017  Sum_probs=63.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..+.+  ++|+|||+||.......   ....+++|+.|+.++++.+++. +..+++++
T Consensus        55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  127 (341)
T 3enk_A           55 KTPAFHETDVSDE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFS  127 (341)
T ss_dssp             CCCEEECCCTTCH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             CCceEEEeecCCH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence            3689999999984      45677766  79999999998764433   2457889999999999999874 45678999


Q ss_pred             cccCccceeeeEeecCC
Q psy3446          89 KTEVPHFLEKISAVAGD  105 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD  105 (166)
                      ||..+++.....++.++
T Consensus       128 SS~~~~g~~~~~~~~e~  144 (341)
T 3enk_A          128 SSATVYGVPERSPIDET  144 (341)
T ss_dssp             EEGGGBCSCSSSSBCTT
T ss_pred             ecceEecCCCCCCCCCC
Confidence            99877654433344444

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.77  E-value=2.9e-08  Score=75.62  Aligned_cols=74  Identities=14%  Similarity=0.020  Sum_probs=58.2

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc--C-ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT--N-VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~--~-~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      ++++.+|++++      +.+..+++  + +|+|||+||.....   ..+...+++|+.|+.++++.+++. +.++++++|
T Consensus        71 ~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~S  143 (397)
T 1gy8_A           71 AALEVGDVRNE------DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSS  143 (397)
T ss_dssp             CEEEESCTTCH------HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             EEEEECCCCCH------HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEEC
Confidence            89999999985      34566665  5 99999999987643   344568899999999999999873 556788999


Q ss_pred             ccCccce
Q psy3446          90 TEVPHFL   96 (166)
Q Consensus        90 s~~~~~~   96 (166)
                      |..+++.
T Consensus       144 S~~v~g~  150 (397)
T 1gy8_A          144 SAAIFGN  150 (397)
T ss_dssp             EGGGTBS
T ss_pred             CHHHhCC
Confidence            8776643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.76  E-value=2.8e-08  Score=74.39  Aligned_cols=85  Identities=12%  Similarity=0.013  Sum_probs=62.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..+.+  ++|+|||+||.....   ......+++|+.|+.++++.+++. +..+++++
T Consensus        58 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~  130 (348)
T 1ek6_A           58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS  130 (348)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred             CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence            3689999999984      44666666  799999999986543   234567899999999999998873 55678999


Q ss_pred             cccCccceeeeEeecCC
Q psy3446          89 KTEVPHFLEKISAVAGD  105 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD  105 (166)
                      ||..+++.....++.++
T Consensus       131 SS~~~~g~~~~~~~~E~  147 (348)
T 1ek6_A          131 SSATVYGNPQYLPLDEA  147 (348)
T ss_dssp             EEGGGGCSCSSSSBCTT
T ss_pred             CcHHHhCCCCCCCcCCC
Confidence            99877654332344443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.74  E-value=3.9e-08  Score=73.64  Aligned_cols=74  Identities=23%  Similarity=0.293  Sum_probs=59.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..+++++|+|||+||......   .....+++|+.|+.++++.|.+. +. +++++||
T Consensus        54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS  125 (348)
T 1oc2_A           54 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVST  125 (348)
T ss_dssp             SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred             CCeEEEECCCCCH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecc
Confidence            4789999999984      457788889999999999875432   33567899999999999999875 34 7889998


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..+++
T Consensus       126 ~~vyg  130 (348)
T 1oc2_A          126 DEVYG  130 (348)
T ss_dssp             GGGGC
T ss_pred             cceeC
Confidence            77654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.73  E-value=2.2e-09  Score=78.54  Aligned_cols=97  Identities=12%  Similarity=0.053  Sum_probs=64.6

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcC-ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTN-VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~-~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      ..+++++.+|++++.      .+..+.++ +|+|||+||...  ......+++|+.|+.++++.|++ .+.++|+++||.
T Consensus        40 ~~~~~~~~~Dl~d~~------~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS~  110 (286)
T 3gpi_A           40 PAGVQTLIADVTRPD------TLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSST  110 (286)
T ss_dssp             CTTCCEEECCTTCGG------GCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEEG
T ss_pred             ccCCceEEccCCChH------HHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEccc
Confidence            357899999999864      24445555 999999999743  34456788999999999999986 456789999998


Q ss_pred             CccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          92 VPHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        92 ~~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      .+++.....++.++  .+..+.+.|...|
T Consensus       111 ~vyg~~~~~~~~E~--~~~~p~~~Y~~sK  137 (286)
T 3gpi_A          111 GVYGQEVEEWLDED--TPPIAKDFSGKRM  137 (286)
T ss_dssp             GGCCCCCSSEECTT--SCCCCCSHHHHHH
T ss_pred             EEEcCCCCCCCCCC--CCCCCCChhhHHH
Confidence            87765443455454  2333344444333

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.73  E-value=3.3e-08  Score=73.61  Aligned_cols=77  Identities=18%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||.....   ......+++|+.|+.++++.+++.....+++++
T Consensus        63 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~  136 (335)
T 1rpn_A           63 GDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQA  136 (335)
T ss_dssp             GGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CceEEEECCCCCH------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            4689999999984      446666654  69999999986543   345667899999999999999874212678999


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||..+++.
T Consensus       137 SS~~v~g~  144 (335)
T 1rpn_A          137 STSEMFGL  144 (335)
T ss_dssp             EEGGGGCS
T ss_pred             eCHHHhCC
Confidence            99877654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.72  E-value=4.9e-08  Score=74.20  Aligned_cols=75  Identities=16%  Similarity=0.012  Sum_probs=60.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++++      +.+..+++++|+|||+||....    ..+....+++|+.|+.++++.+++. +.++++++|
T Consensus        72 ~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~S  144 (379)
T 2c5a_A           72 FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYAS  144 (379)
T ss_dssp             TCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred             CCceEEECCCCCH------HHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            3689999999984      4577778899999999997653    3345678899999999999999873 566889999


Q ss_pred             ccCccc
Q psy3446          90 TEVPHF   95 (166)
Q Consensus        90 s~~~~~   95 (166)
                      |..+++
T Consensus       145 S~~v~~  150 (379)
T 2c5a_A          145 SACIYP  150 (379)
T ss_dssp             EGGGSC
T ss_pred             ehheeC
Confidence            977654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.72  E-value=4.5e-09  Score=77.40  Aligned_cols=84  Identities=14%  Similarity=-0.045  Sum_probs=61.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .++++.+|++++      +.+..+.++  +|+|||+||....    ..+....+++|+.|+.++++.|++. +.++++++
T Consensus        39 ~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~  111 (319)
T 4b8w_A           39 FVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSC  111 (319)
T ss_dssp             ECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             ccCceecccCCH------HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence            456678999884      446666665  9999999998642    2344567899999999999999874 56678999


Q ss_pred             cccCccceeeeEeecCC
Q psy3446          89 KTEVPHFLEKISAVAGD  105 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD  105 (166)
                      ||..+++.....++.++
T Consensus       112 SS~~vyg~~~~~~~~E~  128 (319)
T 4b8w_A          112 LSTCIFPDKTTYPIDET  128 (319)
T ss_dssp             CCGGGSCSSCCSSBCGG
T ss_pred             cchhhcCCCCCCCcccc
Confidence            99877654443344443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.72  E-value=2.8e-08  Score=75.49  Aligned_cols=78  Identities=12%  Similarity=0.032  Sum_probs=58.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+.++++++|+|||+||.....   ......+++|+.|+.++++.|++....++++++||
T Consensus        78 ~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS  151 (377)
T 2q1s_A           78 PAVRFSETSITDD------ALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA  151 (377)
T ss_dssp             TTEEEECSCTTCH------HHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred             CceEEEECCCCCH------HHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence            5789999999984      45777778999999999987643   24456789999999999999986314668999999


Q ss_pred             cCcccee
Q psy3446          91 EVPHFLE   97 (166)
Q Consensus        91 ~~~~~~~   97 (166)
                      ..+++..
T Consensus       152 ~~vyg~~  158 (377)
T 2q1s_A          152 GCSIAEK  158 (377)
T ss_dssp             C------
T ss_pred             HHHcCCC
Confidence            8776543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.71  E-value=3.4e-08  Score=73.67  Aligned_cols=84  Identities=14%  Similarity=0.094  Sum_probs=61.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhcc-chhhcc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQL-KLFLRL   88 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~-~~~~~~   88 (166)
                      +++++.+|++++      +.+.++.++  +|+|||+||.....   ..+...+++|+.|+.++++.|++. +. .+++++
T Consensus        53 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~  125 (345)
T 2z1m_A           53 DVKIIHMDLLEF------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQA  125 (345)
T ss_dssp             TEEECCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEE
T ss_pred             ceeEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEE
Confidence            689999999984      446666654  69999999986543   345667899999999999999874 43 678999


Q ss_pred             cccCccceeeeEeecCC
Q psy3446          89 KTEVPHFLEKISAVAGD  105 (166)
Q Consensus        89 ss~~~~~~~~~~~v~gD  105 (166)
                      ||..+++.....++.++
T Consensus       126 SS~~vyg~~~~~~~~e~  142 (345)
T 2z1m_A          126 STSEMFGKVQEIPQTEK  142 (345)
T ss_dssp             EEGGGGCSCSSSSBCTT
T ss_pred             echhhcCCCCCCCCCcc
Confidence            99877654332333343

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.70  E-value=3.2e-08  Score=72.98  Aligned_cols=96  Identities=15%  Similarity=0.043  Sum_probs=66.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++.+       ..+.++ |+|||+||.....   ......+++|+.|+.++++.+++. +.++++++||
T Consensus        43 ~~~~~~~~Dl~d~~~-------~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS  113 (312)
T 3ko8_A           43 PSAELHVRDLKDYSW-------GAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASS  113 (312)
T ss_dssp             TTSEEECCCTTSTTT-------TTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEE
T ss_pred             CCceEEECccccHHH-------HhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCc
Confidence            578999999999752       333445 9999999965432   234567899999999999999874 5668999999


Q ss_pred             cCccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          91 EVPHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      ..+++.....++.++  .+..+.+.|...|
T Consensus       114 ~~vyg~~~~~~~~e~--~~~~p~~~Y~~sK  141 (312)
T 3ko8_A          114 STVYGDADVIPTPEE--EPYKPISVYGAAK  141 (312)
T ss_dssp             GGGGCSCSSSSBCTT--SCCCCCSHHHHHH
T ss_pred             HHHhCCCCCCCCCCC--CCCCCCChHHHHH
Confidence            887765443445454  3333444444433

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.69  E-value=4.8e-08  Score=72.90  Aligned_cols=74  Identities=8%  Similarity=-0.025  Sum_probs=53.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      +++++.+|++++      +.+..+.+++|+|||+||.... ..+....+++|+.|+.++++.|++. +..+++++||..+
T Consensus        57 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~  129 (342)
T 2x4g_A           57 EPECRVAEMLDH------AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYA  129 (342)
T ss_dssp             CCEEEECCTTCH------HHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGG
T ss_pred             CeEEEEecCCCH------HHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHh
Confidence            789999999984      4577888899999999997653 2344557899999999999999884 5678899999876


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      ++
T Consensus       130 ~~  131 (342)
T 2x4g_A          130 MP  131 (342)
T ss_dssp             SC
T ss_pred             hC
Confidence            54

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.69  E-value=4.1e-09  Score=78.62  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=59.9

Q ss_pred             cceEEE-ecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAV-AGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~-~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++ .+|++++..      +..+.+++|+|||+||...........+++|+.|+.++++.|++..+..+++++||..
T Consensus        61 ~~~~~~~~~D~~d~~~------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~  134 (342)
T 1y1p_A           61 GRFETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             TTEEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             CceEEEEecCCcChHH------HHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence            468888 899998642      4556678999999999887666667788999999999999998533456789999876


Q ss_pred             cc
Q psy3446          93 PH   94 (166)
Q Consensus        93 ~~   94 (166)
                      .+
T Consensus       135 ~~  136 (342)
T 1y1p_A          135 SA  136 (342)
T ss_dssp             GT
T ss_pred             Hh
Confidence            64

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.67  E-value=4.6e-08  Score=72.10  Aligned_cols=75  Identities=15%  Similarity=0.053  Sum_probs=58.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++++      +.+..+.+  ++|+|||+||.....  ......+++|+.|+.++++.+++ .+.++++++|
T Consensus        45 ~~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~S  117 (312)
T 2yy7_A           45 NSGPFEVVNALDF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWPS  117 (312)
T ss_dssp             HSSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECCE
T ss_pred             CCCceEEecCCCH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEec
Confidence            3578999999984      45666666  899999999986542  34456789999999999999987 3566889999


Q ss_pred             ccCccc
Q psy3446          90 TEVPHF   95 (166)
Q Consensus        90 s~~~~~   95 (166)
                      |...++
T Consensus       118 S~~~~~  123 (312)
T 2yy7_A          118 SIAVFG  123 (312)
T ss_dssp             EGGGCC
T ss_pred             cHHHhC
Confidence            987654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.67  E-value=7e-08  Score=72.56  Aligned_cols=77  Identities=17%  Similarity=0.165  Sum_probs=59.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||.....   ......+.+|+.|+.++++.|++.....+++++
T Consensus        57 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~  130 (357)
T 1rkx_A           57 DGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI  130 (357)
T ss_dssp             TTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             CceEEEEccccCH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence            4789999999984      446666665  89999999964332   334567899999999999999875336789999


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||..+++.
T Consensus       131 SS~~vyg~  138 (357)
T 1rkx_A          131 TSDKCYDN  138 (357)
T ss_dssp             CCGGGBCC
T ss_pred             cCHHHhCC
Confidence            99877643

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.66  E-value=7.6e-08  Score=71.13  Aligned_cols=74  Identities=22%  Similarity=0.198  Sum_probs=57.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecc--hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~--~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      +++++.+|++++      +.+..+.+  ++|+|||+||....  .......+++|+.|+.++++.+++. +.++++++||
T Consensus        40 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS  112 (317)
T 3ajr_A           40 GIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPST  112 (317)
T ss_dssp             TCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEE
T ss_pred             CceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecC
Confidence            577899999984      44666666  89999999997643  2344567899999999999999873 5668899999


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..+++
T Consensus       113 ~~~~~  117 (317)
T 3ajr_A          113 IGVFG  117 (317)
T ss_dssp             GGGCC
T ss_pred             HHHhC
Confidence            87664

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.66  E-value=1e-07  Score=68.91  Aligned_cols=74  Identities=15%  Similarity=0.071  Sum_probs=59.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+.+++|+|||+|+... ...+...+++|+.|+.++++.+++ .+.++++++||...
T Consensus        42 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~  113 (267)
T 3ay3_A           42 AHEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARN-LGKPRIVFASSNHT  113 (267)
T ss_dssp             TTEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHH-TTCCEEEEEEEGGG
T ss_pred             CCccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCHHH
Confidence            4678999999884      457778889999999999763 344566789999999999999987 35567889998766


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      ++
T Consensus       114 ~~  115 (267)
T 3ay3_A          114 IG  115 (267)
T ss_dssp             ST
T ss_pred             hC
Confidence            53

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.65  E-value=8.9e-08  Score=72.51  Aligned_cols=85  Identities=12%  Similarity=0.067  Sum_probs=61.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhcc---chh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQL---KLF   85 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~---~~~   85 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||.....   ......+++|+.|+.++++.+++. ..   .++
T Consensus        79 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~i  151 (375)
T 1t2a_A           79 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKF  151 (375)
T ss_dssp             -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred             CCceEEEccCCCH------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceE
Confidence            4688999999984      445666554  69999999987653   334567899999999999999874 33   578


Q ss_pred             hcccccCccceeeeEeecCC
Q psy3446          86 LRLKTEVPHFLEKISAVAGD  105 (166)
Q Consensus        86 ~~~ss~~~~~~~~~~~v~gD  105 (166)
                      +++||..+++.....++.++
T Consensus       152 v~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          152 YQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             EEEEEGGGTCSCSSSSBCTT
T ss_pred             EEecchhhhCCCCCCCCCcc
Confidence            99999877653332234343

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.65  E-value=5.8e-08  Score=72.52  Aligned_cols=76  Identities=24%  Similarity=0.192  Sum_probs=58.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||.....   ..+...+++|+.|+.++++.|++.....+++++
T Consensus        50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~  123 (347)
T 1orr_A           50 GNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYS  123 (347)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CceEEEEcCCCCH------HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            3589999999984      456777776  99999999986543   244567899999999999999875322378899


Q ss_pred             cccCccc
Q psy3446          89 KTEVPHF   95 (166)
Q Consensus        89 ss~~~~~   95 (166)
                      ||..+++
T Consensus       124 SS~~v~g  130 (347)
T 1orr_A          124 STNKVYG  130 (347)
T ss_dssp             EEGGGGT
T ss_pred             ccHHHhC
Confidence            9877654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.64  E-value=3.7e-08  Score=77.72  Aligned_cols=71  Identities=21%  Similarity=0.264  Sum_probs=54.1

Q ss_pred             ccceEEEecCCCC-CCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          13 LEKISAVAGDVSL-PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        13 ~~~~~~~~gDl~~-~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .++++++.||+++ +.++        +..++|+|||+||.+.+..++.....+|+.|+.+++++|++  ..+.++++||.
T Consensus       210 ~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~  279 (508)
T 4f6l_B          210 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTI  279 (508)
T ss_dssp             STTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEES
T ss_pred             cCceEEEecCCcccccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCCh
Confidence            3589999999999 5553        45789999999999887777777889999999999999987  45678999998


Q ss_pred             Cc
Q psy3446          92 VP   93 (166)
Q Consensus        92 ~~   93 (166)
                      .+
T Consensus       280 ~v  281 (508)
T 4f6l_B          280 SV  281 (508)
T ss_dssp             CT
T ss_pred             hh
Confidence            77

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.63  E-value=1.2e-07  Score=71.28  Aligned_cols=76  Identities=20%  Similarity=0.224  Sum_probs=58.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHh-ccc----
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR-QLK----   83 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~-~~~----   83 (166)
                      .+++++.+|++++      +.+..+++  ++|+|||+||.....   ......+++|+.|+.++++.+.+.. +.+    
T Consensus        50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~  123 (361)
T 1kew_A           50 NRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK  123 (361)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred             CCeEEEECCCCCH------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence            4689999999984      45666766  899999999987543   2335678999999999999998751 333    


Q ss_pred             ---hhhcccccCccc
Q psy3446          84 ---LFLRLKTEVPHF   95 (166)
Q Consensus        84 ---~~~~~ss~~~~~   95 (166)
                         +++++||..+++
T Consensus       124 ~~~~iv~~SS~~v~g  138 (361)
T 1kew_A          124 NNFRFHHISTDEVYG  138 (361)
T ss_dssp             HHCEEEEEEEGGGGC
T ss_pred             cCceEEEeCCHHHhC
Confidence               788999876654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.63  E-value=2.9e-08  Score=74.15  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=58.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++.     +.+..+.+++|+|||+||.....   ......+++|+.|+.++++.+++. + .+++++||
T Consensus        45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS  117 (345)
T 2bll_A           45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST  117 (345)
T ss_dssp             TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred             CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence            47899999999852     23566667899999999976532   344567889999999999999874 3 67899999


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       118 ~~v~g~  123 (345)
T 2bll_A          118 SEVYGM  123 (345)
T ss_dssp             GGGGBT
T ss_pred             HHHcCC
Confidence            877643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.61  E-value=9.8e-08  Score=72.43  Aligned_cols=83  Identities=10%  Similarity=0.031  Sum_probs=60.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccc-----h
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLK-----L   84 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~-----~   84 (166)
                      +++++.+|++++      +.+..++++  +|+|||+||.....   ......+++|+.|+.++++.|++.. .+     +
T Consensus        84 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~  156 (381)
T 1n7h_A           84 LMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVK  156 (381)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCE
T ss_pred             ceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccE
Confidence            688999999984      446666654  69999999987653   3345678999999999999998743 22     7


Q ss_pred             hhcccccCccceeeeEeecCC
Q psy3446          85 FLRLKTEVPHFLEKISAVAGD  105 (166)
Q Consensus        85 ~~~~ss~~~~~~~~~~~v~gD  105 (166)
                      ++++||..+++.... ++.++
T Consensus       157 ~v~~SS~~vyg~~~~-~~~E~  176 (381)
T 1n7h_A          157 YYQAGSSEMFGSTPP-PQSET  176 (381)
T ss_dssp             EEEEEEGGGGTTSCS-SBCTT
T ss_pred             EEEeCcHHHhCCCCC-CCCCC
Confidence            889999877654332 44443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.60  E-value=8e-08  Score=67.71  Aligned_cols=71  Identities=8%  Similarity=-0.013  Sum_probs=55.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+.+++|+|||+|+...-   ....+++|+.++.++++.+++. +.++++++||...
T Consensus        46 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~  115 (227)
T 3dhn_A           46 EHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGWN---NPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGS  115 (227)
T ss_dssp             TTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTT
T ss_pred             CceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCCC---ChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhh
Confidence            6899999999984      5678888899999999986521   1236778999999999999874 5668899998765


Q ss_pred             c
Q psy3446          94 H   94 (166)
Q Consensus        94 ~   94 (166)
                      +
T Consensus       116 ~  116 (227)
T 3dhn_A          116 L  116 (227)
T ss_dssp             S
T ss_pred             c
Confidence            4

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.59  E-value=2.2e-07  Score=69.32  Aligned_cols=75  Identities=17%  Similarity=0.081  Sum_probs=56.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      +++++.+|++++      +.+..+.+  ++|+|||+||......   .....+++|+.|+.++++.+++. +..+++++|
T Consensus        51 ~~~~~~~Dl~~~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~S  123 (338)
T 1udb_A           51 HPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSS  123 (338)
T ss_dssp             CCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             cceEEEccCCCH------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEc
Confidence            578999999984      34555554  5899999999765432   33457889999999999998874 456788999


Q ss_pred             ccCccce
Q psy3446          90 TEVPHFL   96 (166)
Q Consensus        90 s~~~~~~   96 (166)
                      |..+++.
T Consensus       124 S~~~~g~  130 (338)
T 1udb_A          124 SATVYGD  130 (338)
T ss_dssp             EGGGGCS
T ss_pred             cHHHhCC
Confidence            8876643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.59  E-value=1.3e-07  Score=72.93  Aligned_cols=70  Identities=20%  Similarity=0.240  Sum_probs=51.7

Q ss_pred             cceEEEecCCCCC-CCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLP-GLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~-~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.||++++ .++        ...++|+|||+||......++...+++|+.|+.+++++|.+  ....++++||..
T Consensus       130 ~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~  199 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTIS  199 (427)
T ss_dssp             TTEEEEEECC---CCCC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGG
T ss_pred             CceEEEeCCCCCcccCC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchH
Confidence            5799999999994 432        45789999999999877677777899999999999999988  457789999887


Q ss_pred             c
Q psy3446          93 P   93 (166)
Q Consensus        93 ~   93 (166)
                      .
T Consensus       200 ~  200 (427)
T 4f6c_A          200 V  200 (427)
T ss_dssp             G
T ss_pred             h
Confidence            6

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=98.58  E-value=2.1e-07  Score=69.38  Aligned_cols=73  Identities=21%  Similarity=0.122  Sum_probs=57.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++++      +.+..+++  ++|+|||+||.....  ..+.  +++|+.|+.++++.+.+. +..+++++|
T Consensus        65 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~S  135 (330)
T 2pzm_A           65 AGLSVIEGSVTDA------GLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQ  135 (330)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred             CCceEEEeeCCCH------HHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence            5789999999984      45677777  899999999987642  2333  789999999999999874 466889999


Q ss_pred             ccCccc
Q psy3446          90 TEVPHF   95 (166)
Q Consensus        90 s~~~~~   95 (166)
                      |..+++
T Consensus       136 S~~~~~  141 (330)
T 2pzm_A          136 TALCYG  141 (330)
T ss_dssp             EGGGGC
T ss_pred             CHHHhC
Confidence            887654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.57  E-value=2e-07  Score=70.39  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=57.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhcc---chh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQL---KLF   85 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~---~~~   85 (166)
                      .+++++.+|++++      +.+..+.++  +|+|||+||.....   ......+++|+.|+.++++.+++. ..   .++
T Consensus        55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~i  127 (372)
T 1db3_A           55 PKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRF  127 (372)
T ss_dssp             CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEE
T ss_pred             CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEE
Confidence            4688999999984      446666554  79999999986543   234567889999999999999874 33   578


Q ss_pred             hcccccCccce
Q psy3446          86 LRLKTEVPHFL   96 (166)
Q Consensus        86 ~~~ss~~~~~~   96 (166)
                      +++||..+++.
T Consensus       128 v~~SS~~v~g~  138 (372)
T 1db3_A          128 YQASTSELYGL  138 (372)
T ss_dssp             EEEEEGGGGTT
T ss_pred             EEeCChhhhCC
Confidence            89998876643

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=98.57  E-value=2.1e-07  Score=67.87  Aligned_cols=90  Identities=14%  Similarity=0.127  Sum_probs=62.1

Q ss_pred             ecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          20 AGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        20 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      .+|++++      +.+..+.+  ++|+|||+||......   .....+++|+.|+.++++.+++.. . +++++||..++
T Consensus        39 ~~D~~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy  110 (287)
T 3sc6_A           39 LLDITNI------SQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVF  110 (287)
T ss_dssp             TSCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGS
T ss_pred             ccCCCCH------HHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhc
Confidence            4777763      45666666  6999999999876543   456788999999999999998853 4 48899998776


Q ss_pred             ceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          95 FLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        95 ~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      +.....++.++  .+..+.+.|...
T Consensus       111 ~~~~~~~~~E~--~~~~p~~~Y~~s  133 (287)
T 3sc6_A          111 QGDRPEGYDEF--HNPAPINIYGAS  133 (287)
T ss_dssp             CCCCSSCBCTT--SCCCCCSHHHHH
T ss_pred             CCCCCCCCCCC--CCCCCCCHHHHH
Confidence            54433444444  233344444433

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.56  E-value=1.2e-07  Score=72.39  Aligned_cols=76  Identities=14%  Similarity=-0.010  Sum_probs=57.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecchh---hH---HHHHHhhhhcHHHHHHHHHHHhccchh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KI---QLAVAINVLGVRAMLELAREIRQLKLF   85 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~~---~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~   85 (166)
                      .+++++.+|++++      +.+..++++  +|+|||+||......   ..   ...+++|+.|+.++++.+++....+++
T Consensus        77 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~  150 (404)
T 1i24_A           77 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHL  150 (404)
T ss_dssp             CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEE
Confidence            4689999999984      446666666  999999999765332   12   236789999999999999874322478


Q ss_pred             hcccccCccc
Q psy3446          86 LRLKTEVPHF   95 (166)
Q Consensus        86 ~~~ss~~~~~   95 (166)
                      +++||..+++
T Consensus       151 V~~SS~~vyg  160 (404)
T 1i24_A          151 VKLGTMGEYG  160 (404)
T ss_dssp             EEECCGGGGC
T ss_pred             EEeCcHHHhC
Confidence            9999987664

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.55  E-value=1.8e-07  Score=68.97  Aligned_cols=75  Identities=19%  Similarity=0.115  Sum_probs=56.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..+.+  ++|+|||+||.....   ......+++|+.|+.++++.+++. +.++++++
T Consensus        43 ~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~  115 (311)
T 2p5y_A           43 KGVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFA  115 (311)
T ss_dssp             TTCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred             cCeEEEECCCCCH------HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEe
Confidence            4678999999984      34566665  799999999976543   234567899999999999999873 45678899


Q ss_pred             ccc-Cccc
Q psy3446          89 KTE-VPHF   95 (166)
Q Consensus        89 ss~-~~~~   95 (166)
                      ||. ..++
T Consensus       116 SS~~~~~g  123 (311)
T 2p5y_A          116 STGGAIYG  123 (311)
T ss_dssp             EEHHHHHC
T ss_pred             CCChhhcC
Confidence            887 4443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.55  E-value=2.8e-07  Score=68.72  Aligned_cols=73  Identities=15%  Similarity=0.149  Sum_probs=57.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .+++++.+|++++      +.+.+++++  +|+|||+||.....  ....  +++|+.|+.++++.+++ .+..+++++|
T Consensus        66 ~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~-~~~~~iV~~S  136 (333)
T 2q1w_A           66 PNLTFVEGSIADH------ALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKK-NNVGRFVYFQ  136 (333)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHH-TTCSEEEEEE
T ss_pred             CCceEEEEeCCCH------HHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHH-hCCCEEEEEC
Confidence            4789999999984      446677776  99999999987652  2222  88999999999999987 3556789999


Q ss_pred             ccCccc
Q psy3446          90 TEVPHF   95 (166)
Q Consensus        90 s~~~~~   95 (166)
                      |...++
T Consensus       137 S~~~~g  142 (333)
T 2q1w_A          137 TALCYG  142 (333)
T ss_dssp             EGGGGC
T ss_pred             cHHHhC
Confidence            977664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=98.51  E-value=3.4e-07  Score=66.88  Aligned_cols=69  Identities=20%  Similarity=0.197  Sum_probs=52.4

Q ss_pred             ecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          20 AGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        20 ~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      .+|+++      ++.+..+++  ++|+|||+||.....   .+....+++|+.|+.++++.+++. +. +++++||..++
T Consensus        46 ~~Dl~d------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~  117 (292)
T 1vl0_A           46 DLDITN------VLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVF  117 (292)
T ss_dssp             TCCTTC------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred             cCCCCC------HHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeE
Confidence            367766      345666666  799999999987643   344668899999999999999874 34 78899998766


Q ss_pred             ce
Q psy3446          95 FL   96 (166)
Q Consensus        95 ~~   96 (166)
                      +.
T Consensus       118 ~~  119 (292)
T 1vl0_A          118 DG  119 (292)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.50  E-value=1.4e-07  Score=69.06  Aligned_cols=80  Identities=21%  Similarity=0.155  Sum_probs=56.6

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ++.+|++++      +.+.++.++  +|+|||+||.....   ......+++|+.|+.++++.|++. +. +++++||..
T Consensus        35 ~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~  106 (299)
T 1n2s_A           35 EFCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDY  106 (299)
T ss_dssp             SSCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGG
T ss_pred             cccccCCCH------HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEeccc
Confidence            356888773      446666665  99999999987643   345667899999999999999874 34 588999987


Q ss_pred             ccceeeeEeecCC
Q psy3446          93 PHFLEKISAVAGD  105 (166)
Q Consensus        93 ~~~~~~~~~v~gD  105 (166)
                      +++.....++.++
T Consensus       107 vy~~~~~~~~~E~  119 (299)
T 1n2s_A          107 VFPGTGDIPWQET  119 (299)
T ss_dssp             GSCCCTTCCBCTT
T ss_pred             EEeCCCCCCCCCC
Confidence            7654332234343

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.49  E-value=2.1e-07  Score=69.38  Aligned_cols=72  Identities=10%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch--hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~--~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +++++.+|++++.      .+..+++++|+|||+||...+.  .+....+++|+.|+.++++.|++....++++++||..
T Consensus        57 ~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~  130 (337)
T 2c29_D           57 HLTLWKADLADEG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAG  130 (337)
T ss_dssp             HEEEEECCTTSTT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGG
T ss_pred             eEEEEEcCCCCHH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHh
Confidence            6889999999864      2567778999999999976432  2233578899999999999998754367888998865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.47  E-value=1.4e-07  Score=70.37  Aligned_cols=73  Identities=15%  Similarity=0.188  Sum_probs=53.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-hhH-HHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-EKI-QLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-~~~-~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .+++++.+|++++..      +..+++++|+|||+||...+. ... ...+++|+.|+.++++.|++....++++++||.
T Consensus        59 ~~~~~~~~Dl~d~~~------~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~  132 (338)
T 2rh8_A           59 GDLKIFRADLTDELS------FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA  132 (338)
T ss_dssp             SCEEEEECCTTTSSS------SHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred             CcEEEEecCCCChHH------HHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence            368899999998642      566778899999999976543 222 337889999999999999874336778898886


Q ss_pred             C
Q psy3446          92 V   92 (166)
Q Consensus        92 ~   92 (166)
                      .
T Consensus       133 ~  133 (338)
T 2rh8_A          133 A  133 (338)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.44  E-value=1.7e-07  Score=76.30  Aligned_cols=76  Identities=12%  Similarity=0.039  Sum_probs=59.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc---hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~---~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++.     +.+..+.+++|+|||+||....   ..+....+++|+.|+.++++.|++. + .+++++||
T Consensus       360 ~~v~~v~~Dl~d~~-----~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS  432 (660)
T 1z7e_A          360 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPST  432 (660)
T ss_dssp             TTEEEEECCTTTCH-----HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECC
T ss_pred             CceEEEECCCCCcH-----HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEec
Confidence            47899999999852     2355666789999999998653   2345567899999999999999874 3 68899999


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       433 ~~vyg~  438 (660)
T 1z7e_A          433 SEVYGM  438 (660)
T ss_dssp             GGGGBT
T ss_pred             HHHcCC
Confidence            776643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.42  E-value=6.6e-07  Score=67.23  Aligned_cols=72  Identities=15%  Similarity=0.202  Sum_probs=57.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++      +.+..+++++|+|||+||.....   ......+++|+.|+.++++.+.+. +.++++++||
T Consensus        70 ~~v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS  142 (344)
T 2gn4_A           70 PRMRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALST  142 (344)
T ss_dssp             TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred             CCEEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecC
Confidence            4789999999984      45777888999999999986532   233568899999999999999874 5667888887


Q ss_pred             cC
Q psy3446          91 EV   92 (166)
Q Consensus        91 ~~   92 (166)
                      ..
T Consensus       143 ~~  144 (344)
T 2gn4_A          143 DK  144 (344)
T ss_dssp             GG
T ss_pred             Cc
Confidence            54

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.42  E-value=7.6e-07  Score=72.82  Aligned_cols=75  Identities=17%  Similarity=0.111  Sum_probs=58.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.+..+++  ++|+|||+||......   .....+++|+.|+.++++.+++. +.++++++
T Consensus        61 ~~v~~v~~Dl~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~  133 (699)
T 1z45_A           61 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFS  133 (699)
T ss_dssp             SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             CceEEEEcCCCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            4688999999984      44666666  7999999999875432   23457899999999999999874 45678999


Q ss_pred             cccCccc
Q psy3446          89 KTEVPHF   95 (166)
Q Consensus        89 ss~~~~~   95 (166)
                      ||..+++
T Consensus       134 SS~~vyg  140 (699)
T 1z45_A          134 SSATVYG  140 (699)
T ss_dssp             EEGGGGC
T ss_pred             CcHHHhC
Confidence            9987654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.38  E-value=2.3e-07  Score=68.58  Aligned_cols=69  Identities=10%  Similarity=-0.018  Sum_probs=52.7

Q ss_pred             cCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          21 GDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        21 gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      +|+++      .+.+..+++  ++|+|||+||....    ..+....+++|+.|+.++++.|++. +.++++++||..++
T Consensus        39 ~D~~d------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           39 LNLLD------SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIY  111 (321)
T ss_dssp             CCTTC------HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGS
T ss_pred             CCccC------HHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHc
Confidence            56665      345677777  89999999998652    2344567899999999999999873 56689999998776


Q ss_pred             ce
Q psy3446          95 FL   96 (166)
Q Consensus        95 ~~   96 (166)
                      +.
T Consensus       112 g~  113 (321)
T 1e6u_A          112 PK  113 (321)
T ss_dssp             CT
T ss_pred             CC
Confidence            43

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.37  E-value=1.8e-07  Score=69.12  Aligned_cols=72  Identities=19%  Similarity=0.246  Sum_probs=53.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh-h-HHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE-K-IQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~-~-~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +++++.||++++      +.+..+++++|+|||+|+...+.. . ....+++|+.|+.++++.|++..+.++++++||..
T Consensus        54 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~  127 (322)
T 2p4h_X           54 KLHFFNADLSNP------DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGS  127 (322)
T ss_dssp             HEEECCCCTTCG------GGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGG
T ss_pred             ceEEEecCCCCH------HHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence            578999999985      346777889999999998653321 1 23478899999999999988742456788998865

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.35  E-value=2.9e-07  Score=67.95  Aligned_cols=71  Identities=15%  Similarity=0.069  Sum_probs=34.6

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ++.+|++++..      +..+.+  ++|+|||+||.....   .+....+++|+.|+.++++.+++. +. +++++||..
T Consensus        41 ~~~~Dl~d~~~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~  112 (315)
T 2ydy_A           41 FEQVNLLDSNA------VHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDY  112 (315)
T ss_dssp             -----------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGG
T ss_pred             eEEecCCCHHH------HHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHH
Confidence            67799988642      344444  489999999986543   344567889999999999999874 33 788999887


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       113 v~~~  116 (315)
T 2ydy_A          113 VFDG  116 (315)
T ss_dssp             GSCS
T ss_pred             HcCC
Confidence            7643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.35  E-value=1.7e-06  Score=62.35  Aligned_cols=69  Identities=20%  Similarity=0.156  Sum_probs=53.0

Q ss_pred             EecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          19 VAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      +.+|++++      +.+..+.++  +|+|||+||.....   .++...+++|+.|+.++++.+++. +. +++++||...
T Consensus        39 ~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~  110 (273)
T 2ggs_A           39 YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYV  110 (273)
T ss_dssp             EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGG
T ss_pred             ceeccCCH------HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEeccee
Confidence            67898874      446666665  99999999987643   345668899999999999999874 33 6888998776


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      +.
T Consensus       111 ~~  112 (273)
T 2ggs_A          111 FD  112 (273)
T ss_dssp             SC
T ss_pred             Ec
Confidence            53

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.34  E-value=4.3e-07  Score=66.72  Aligned_cols=70  Identities=16%  Similarity=0.070  Sum_probs=53.3

Q ss_pred             EecCCCCCCCCCCHHhHHHHhc-----CccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          19 VAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~-----~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +.+|++++      +.+..+.+     ++|+|||+||.... .......+++|+.|+.++++.+++. +. +++++||..
T Consensus        47 ~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~  118 (310)
T 1eq2_A           47 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA  118 (310)
T ss_dssp             CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred             eccccccH------HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHH
Confidence            66777663      34666666     49999999998754 2345668899999999999999874 45 889999987


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       119 v~g~  122 (310)
T 1eq2_A          119 TYGG  122 (310)
T ss_dssp             GGTT
T ss_pred             HhCC
Confidence            7643

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.32  E-value=1.8e-06  Score=64.51  Aligned_cols=70  Identities=23%  Similarity=0.178  Sum_probs=54.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|++++.+           .++|+|||+||.....   ......+++|+.|+.++++.|++.. . +++++||
T Consensus        75 ~~~~~~~~D~~~~~~-----------~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS  141 (343)
T 2b69_A           75 ENFELINHDVVEPLY-----------IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLAST  141 (343)
T ss_dssp             TTEEEEECCTTSCCC-----------CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEE
T ss_pred             CceEEEeCccCChhh-----------cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECc
Confidence            468999999998643           4689999999986532   3445678999999999999998753 3 6888998


Q ss_pred             cCccce
Q psy3446          91 EVPHFL   96 (166)
Q Consensus        91 ~~~~~~   96 (166)
                      ..+++.
T Consensus       142 ~~v~g~  147 (343)
T 2b69_A          142 SEVYGD  147 (343)
T ss_dssp             GGGGBS
T ss_pred             HHHhCC
Confidence            776643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.32  E-value=1.3e-08  Score=79.86  Aligned_cols=65  Identities=29%  Similarity=0.378  Sum_probs=58.1

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++.+|++...++++++++|+|||+|+..++ .++...+.+|+.|+.+++++|.+.
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~  204 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT  204 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC
Confidence            46788999999999999999999999999999999998877 666678899999999999999764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.30  E-value=5.4e-07  Score=67.74  Aligned_cols=70  Identities=16%  Similarity=0.070  Sum_probs=53.2

Q ss_pred             EecCCCCCCCCCCHHhHHHHhc-----CccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          19 VAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~-----~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      +.+|++++      +.++.+.+     ++|+|||+||.... .......+++|+.|+.++++.+++. +. +++++||..
T Consensus        94 ~~~d~~~~------~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~  165 (357)
T 2x6t_A           94 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA  165 (357)
T ss_dssp             CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred             EeeecCcH------HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchH
Confidence            56777663      34566665     59999999998654 3345678899999999999999874 45 889999987


Q ss_pred             ccce
Q psy3446          93 PHFL   96 (166)
Q Consensus        93 ~~~~   96 (166)
                      +++.
T Consensus       166 v~g~  169 (357)
T 2x6t_A          166 TYGG  169 (357)
T ss_dssp             GGCS
T ss_pred             HhCC
Confidence            7643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.29  E-value=7.7e-07  Score=63.22  Aligned_cols=93  Identities=17%  Similarity=-0.059  Sum_probs=67.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .++.++.+|++++      +.+..+.+++|+|||+|+...........+++|+.|+.++++.+++. +...++++||...
T Consensus        63 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~  135 (242)
T 2bka_A           63 KNVNQEVVDFEKL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGA  135 (242)
T ss_dssp             GGCEEEECCGGGG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTC
T ss_pred             CCceEEecCcCCH------HHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcC
Confidence            4688999999985      34566778999999999987655556678899999999999998873 4567888888765


Q ss_pred             cceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          94 HFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        94 ~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      +..          ....|+.++...+.+++
T Consensus       136 ~~~----------~~~~Y~~sK~~~e~~~~  155 (242)
T 2bka_A          136 DKS----------SNFLYLQVKGEVEAKVE  155 (242)
T ss_dssp             CTT----------CSSHHHHHHHHHHHHHH
T ss_pred             CCC----------CcchHHHHHHHHHHHHH
Confidence            431          01234555666666554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.21  E-value=2.3e-06  Score=64.27  Aligned_cols=74  Identities=20%  Similarity=0.071  Sum_probs=56.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC---ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhh---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN---VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR-QLKLFL---   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~---~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~---   86 (166)
                      .+++++.+|++++      +.+.++.++   +|+|||+||...  .+....+++|+.|+.++++.|++.. +.++++   
T Consensus        48 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~  119 (364)
T 2v6g_A           48 NPINYVQCDISDP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT  119 (364)
T ss_dssp             SCCEEEECCTTSH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEEC
T ss_pred             CceEEEEeecCCH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEecc
Confidence            4689999999984      456777777   999999999764  3456678999999999999998741 345554   


Q ss_pred             ----cccccCccc
Q psy3446          87 ----RLKTEVPHF   95 (166)
Q Consensus        87 ----~~ss~~~~~   95 (166)
                          ++||..+++
T Consensus       120 g~~i~~Ss~~vyg  132 (364)
T 2v6g_A          120 GRKHYMGPFESYG  132 (364)
T ss_dssp             CTHHHHCCGGGTT
T ss_pred             CceEEEechhhcc
Confidence                788876654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.19  E-value=1.1e-06  Score=61.66  Aligned_cols=71  Identities=15%  Similarity=0.193  Sum_probs=57.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|+++.     ++.+.++++++|+|||+|+...-     ..+++|+.|+.++++.+++ .+.++++++||.+.
T Consensus        41 ~~~~~~~~D~~d~-----~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           41 NNVKAVHFDVDWT-----PEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEK-AEVKRFILLSTIFS  109 (219)
T ss_dssp             TTEEEEECCTTSC-----HHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHH-TTCCEEEEECCTTT
T ss_pred             CCceEEEecccCC-----HHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHH-hCCCEEEEECcccc
Confidence            6799999999981     35577788899999999998652     2567899999999999987 45668899999776


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      +.
T Consensus       110 ~~  111 (219)
T 3dqp_A          110 LQ  111 (219)
T ss_dssp             TC
T ss_pred             cC
Confidence            53

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.11  E-value=6.5e-07  Score=66.02  Aligned_cols=63  Identities=16%  Similarity=0.062  Sum_probs=45.8

Q ss_pred             CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCC
Q psy3446          41 NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGD  105 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD  105 (166)
                      ++|+|||+||.......   ....+. |+.|+.++++.|++. +.++++++||..+++.....++.++
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCCCCCCC
Confidence            78999999998764322   233566 999999999999885 4678999999887754433344444

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.04  E-value=7.6e-06  Score=57.93  Aligned_cols=69  Identities=10%  Similarity=0.144  Sum_probs=54.6

Q ss_pred             ce-EEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          15 KI-SAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        15 ~~-~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      ++ +++.+|++ ..       +.+...++|+|||+|+.... ..+...+++|+.|+.++++.+++. +..+++++||...
T Consensus        65 ~~~~~~~~Dl~-~~-------~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~  134 (236)
T 3e8x_A           65 GASDIVVANLE-ED-------FSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGT  134 (236)
T ss_dssp             TCSEEEECCTT-SC-------CGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTC
T ss_pred             CCceEEEcccH-HH-------HHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCC
Confidence            67 99999999 32       35566789999999997654 445678899999999999999874 4667888888543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.04  E-value=1.2e-05  Score=58.46  Aligned_cols=66  Identities=12%  Similarity=0.165  Sum_probs=52.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+.. ..    .  .+|+.|+.++++.|++ .+.++++++||...
T Consensus        45 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~-~~----~--~~n~~~~~~l~~a~~~-~~~~~~v~~Ss~~~  110 (287)
T 2jl1_A           45 QGVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH-YD----N--TLLIVQHANVVKAARD-AGVKHIAYTGYAFA  110 (287)
T ss_dssp             TTCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC-SC----H--HHHHHHHHHHHHHHHH-TTCSEEEEEEETTG
T ss_pred             cCCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC-cC----c--hHHHHHHHHHHHHHHH-cCCCEEEEECCCCC
Confidence            3688999999984      45778888999999999963 22    1  5689999999999987 45667889988654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=97.98  E-value=1.8e-05  Score=62.58  Aligned_cols=80  Identities=18%  Similarity=0.044  Sum_probs=55.5

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+.+|+.+..        ..++.++|+|||+||....    .......+.+|+.|+.++++++....+.+.++++||..+
T Consensus       186 ~v~~d~~~~~--------~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          186 KRFWDPLNPA--------SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGF  257 (516)
T ss_dssp             CEECCTTSCC--------TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGG
T ss_pred             ceeecccchh--------HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceE
Confidence            4677877542        3345789999999998643    234456789999999999998544356678999999887


Q ss_pred             cc-eeeeEeecCC
Q psy3446          94 HF-LEKISAVAGD  105 (166)
Q Consensus        94 ~~-~~~~~~v~gD  105 (166)
                      ++ .....++.++
T Consensus       258 yg~~~~~~~~~E~  270 (516)
T 3oh8_A          258 YGHDRGDEILTEE  270 (516)
T ss_dssp             GCSEEEEEEECTT
T ss_pred             ecCCCCCCccCCC
Confidence            76 4444455554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.96  E-value=2.4e-05  Score=56.76  Aligned_cols=71  Identities=11%  Similarity=-0.079  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH-hccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI-RQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~-~~~~~~~~~ss~~   92 (166)
                      .+++++.+|+++..           ..++|+|||+|+......+          .+.++++.+++. .+.++|+++||..
T Consensus        47 ~~~~~~~~D~~d~~-----------~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~  105 (286)
T 3ius_A           47 SGAEPLLWPGEEPS-----------LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTA  105 (286)
T ss_dssp             TTEEEEESSSSCCC-----------CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred             CCCeEEEecccccc-----------cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecce
Confidence            46899999999832           4689999999998755422          245777777764 3567899999988


Q ss_pred             ccceeeeEeecCC
Q psy3446          93 PHFLEKISAVAGD  105 (166)
Q Consensus        93 ~~~~~~~~~v~gD  105 (166)
                      +++.....++.++
T Consensus       106 vyg~~~~~~~~E~  118 (286)
T 3ius_A          106 VYGDHDGAWVDET  118 (286)
T ss_dssp             GGCCCTTCEECTT
T ss_pred             ecCCCCCCCcCCC
Confidence            7755443445454

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.95  E-value=6.5e-06  Score=56.71  Aligned_cols=71  Identities=11%  Similarity=0.054  Sum_probs=54.8

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..+++++.+|++++      +.+.++.+++|+|||+|+.......    .++|+.++.++++.+++. +.++++++||..
T Consensus        45 ~~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~  113 (206)
T 1hdo_A           45 PRPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAF  113 (206)
T ss_dssp             CCCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGG
T ss_pred             CCceEEEEecCCCH------HHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeee
Confidence            35789999999884      4577888899999999997543211    247899999999999874 456788888876


Q ss_pred             cc
Q psy3446          93 PH   94 (166)
Q Consensus        93 ~~   94 (166)
                      .+
T Consensus       114 ~~  115 (206)
T 1hdo_A          114 LL  115 (206)
T ss_dssp             GT
T ss_pred             ec
Confidence            54

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.92  E-value=8.9e-06  Score=57.76  Aligned_cols=73  Identities=10%  Similarity=0.112  Sum_probs=55.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh----------h---H---HHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE----------K---I---QLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~----------~---~---~~~~~~nv~gt~~ll~l~~   77 (166)
                      .+++++.+|++++      +.+.++.+++|+|||+|+......          +   +   ...+++|+.++.++++.++
T Consensus        48 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  121 (253)
T 1xq6_A           48 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK  121 (253)
T ss_dssp             CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred             CCeeEEEecCCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH
Confidence            4678999999984      567888889999999999753211          1   1   1356899999999999998


Q ss_pred             HHhccchhhcccccCc
Q psy3446          78 EIRQLKLFLRLKTEVP   93 (166)
Q Consensus        78 ~~~~~~~~~~~ss~~~   93 (166)
                      +. +.++++++||...
T Consensus       122 ~~-~~~~iv~~SS~~~  136 (253)
T 1xq6_A          122 VA-GVKHIVVVGSMGG  136 (253)
T ss_dssp             HH-TCSEEEEEEETTT
T ss_pred             Hc-CCCEEEEEcCccC
Confidence            74 4567888888765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.90  E-value=2.4e-05  Score=56.87  Aligned_cols=64  Identities=8%  Similarity=-0.021  Sum_probs=51.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+.....       ..|+.++.++++.+++ .+.++++++|+.
T Consensus        44 ~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~-~gv~~iv~~Ss~  107 (289)
T 3e48_A           44 GKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQ-SGVAHIIFIGYY  107 (289)
T ss_dssp             TTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHH-TTCCEEEEEEES
T ss_pred             CCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHH-cCCCEEEEEccc
Confidence            5799999999984      56788889999999999976432       2378899999999987 456778888884

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.90  E-value=1.4e-06  Score=65.76  Aligned_cols=73  Identities=14%  Similarity=-0.025  Sum_probs=56.1

Q ss_pred             eEEEecCC-CCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          16 ISAVAGDV-SLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        16 ~~~~~gDl-~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      ++++.+|. ++      ++.+..+.+++|+|||+||..... .....+++|+.++.++++++++.....+++++||...+
T Consensus        26 ~~v~~~d~~~d------~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~   98 (369)
T 3st7_A           26 HHIFEVHRQTK------EEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQAT   98 (369)
T ss_dssp             CEEEECCTTCC------HHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGG
T ss_pred             CEEEEECCCCC------HHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhc
Confidence            47888998 44      566888888999999999987643 33456788999999999999874322378899987664


Q ss_pred             c
Q psy3446          95 F   95 (166)
Q Consensus        95 ~   95 (166)
                      .
T Consensus        99 ~   99 (369)
T 3st7_A           99 Q   99 (369)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.87  E-value=7.8e-05  Score=55.63  Aligned_cols=61  Identities=21%  Similarity=0.263  Sum_probs=47.9

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++.++.+|+.      +...++++++++|+|||+|+.....   ......+.+|+.|+.+++++|++.+
T Consensus        79 ~~~~~~~~Dl~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~  142 (351)
T 3ruf_A           79 SRFCFIEGDIR------DLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ  142 (351)
T ss_dssp             TTEEEEECCTT------CHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             CceEEEEccCC------CHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            46677888974      4567888888999999999975433   2355678999999999999998763

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.82  E-value=6.7e-05  Score=54.12  Aligned_cols=97  Identities=13%  Similarity=0.115  Sum_probs=65.2

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      .|+-+||.+++|..+...+.             +++..+....+..  ......++.++.+|+.      +...++++++
T Consensus         5 ~vlVTGasg~IG~~la~~L~-------------~~G~~V~~~~r~~--~~~~~~~~~~~~~Dl~------d~~~~~~~~~   63 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLA-------------PMAEILRLADLSP--LDPAGPNEECVQCDLA------DANAVNAMVA   63 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTG-------------GGEEEEEEEESSC--CCCCCTTEEEEECCTT------CHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHH-------------hcCCEEEEEecCC--ccccCCCCEEEEcCCC------CHHHHHHHHc
Confidence            58889998888877643321             1211111111111  1111245677888874      4567888889


Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|+|||+|+.. ...++...+.+|+.|+.+++++|++.
T Consensus        64 ~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~  101 (267)
T 3rft_A           64 GCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH  101 (267)
T ss_dssp             TCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999974 34567888999999999999999775

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.80  E-value=8e-05  Score=54.42  Aligned_cols=92  Identities=18%  Similarity=-0.021  Sum_probs=61.0

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      -.|+-+||++++|.++...+...  |.                   ..  ......+..+.+|+.      +...+.+++
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~--g~-------------------~~--~~~~~~~~~~~~D~~------d~~~~~~~~   57 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADG--AG-------------------LP--GEDWVFVSSKDADLT------DTAQTRALF   57 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTT--TC-------------------CT--TCEEEECCTTTCCTT------SHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHhc--CC-------------------cc--cccccccCceecccC------CHHHHHHHH
Confidence            35888999999888875433221  11                   00  001123344567763      345677777


Q ss_pred             cc--ccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         123 TN--VNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       123 ~~--~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++  +|+|||+|+....    .......+.+|+.|+.+++++|++.+
T Consensus        58 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  104 (319)
T 4b8w_A           58 EKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG  104 (319)
T ss_dssp             HHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            66  9999999997541    23456688999999999999998753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.77  E-value=0.00011  Score=52.37  Aligned_cols=74  Identities=14%  Similarity=0.127  Sum_probs=52.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....      ...+...+++|+.|+.++.+.+... 
T Consensus        60 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  133 (255)
T 1fmc_A           60 GQAFACRCDITSE------QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM  133 (255)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            4688999999984      34554443       79999999997543      2334567899999999998877532 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       134 ~~~~~~~iv~~sS~~~  149 (255)
T 1fmc_A          134 EKNGGGVILTITSMAA  149 (255)
T ss_dssp             HHHTCEEEEEECCGGG
T ss_pred             HhcCCcEEEEEcchhh
Confidence              23456777777544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.75  E-value=3.2e-05  Score=53.84  Aligned_cols=65  Identities=11%  Similarity=0.053  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++..        +...++|+|||+|+....      ....|+.+++++++.+++. +..+++++||...
T Consensus        42 ~~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~  106 (221)
T 3ew7_A           42 KDINILQKDIFDLTL--------SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAAS  106 (221)
T ss_dssp             SSSEEEECCGGGCCH--------HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC-
T ss_pred             CCCeEEeccccChhh--------hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceE
Confidence            578999999999752        455789999999998432      2456899999999999873 4567888887654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.74  E-value=0.0001  Score=55.41  Aligned_cols=59  Identities=25%  Similarity=0.326  Sum_probs=46.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-hccccEEEEccccccch-HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-RTNVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-~~~~d~i~h~aa~~~~~-~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...++++ ..++|+|||+|+..... .+....+.+|+.|+.+++++|++.
T Consensus        69 ~~~~~~~Dl~------d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~  129 (362)
T 3sxp_A           69 KGEVIAADIN------NPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK  129 (362)
T ss_dssp             CSEEEECCTT------CHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CceEEECCCC------CHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4466778874      34567777 78899999999976542 456778999999999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.73  E-value=0.00011  Score=52.03  Aligned_cols=73  Identities=21%  Similarity=0.299  Sum_probs=52.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        51 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (244)
T 1edo_A           51 GQAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI  124 (244)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            3688999999984      34454443       68999999997542       1334567899999999998877653


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       125 ~~~~~~~~iv~~sS~~  140 (244)
T 1edo_A          125 MMKKRKGRIINIASVV  140 (244)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHhcCCCEEEEECChh
Confidence               2345677777753

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=97.72  E-value=7.9e-05  Score=55.48  Aligned_cols=60  Identities=27%  Similarity=0.278  Sum_probs=44.3

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.      +...+++++++  +|+|||+|+.....   .....++.+|+.|+.+++++|++.
T Consensus        75 ~~~~~~~~Dl~------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~  139 (346)
T 4egb_A           75 PNYYFVKGEIQ------NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY  139 (346)
T ss_dssp             TTEEEEECCTT------CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS
T ss_pred             CCeEEEEcCCC------CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence            46677888874      44567777776  99999999976543   345668899999999999999875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.72  E-value=6.7e-05  Score=56.48  Aligned_cols=103  Identities=8%  Similarity=0.001  Sum_probs=66.9

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHH-HhccchhhcccccCcc--ceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE-IRQLKLFLRLKTEVPH--FLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~-~~~~~~~~~~ss~~~~--~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      -.|+-+||++++|..+...+.             ++ ...+..+.+.......  ...++.++.+|+..     +...++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~-------------~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~-----d~~~~~   86 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRIL-------------ETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITI-----NKEWVE   86 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHH-------------HHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTT-----CHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHH-------------hCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCC-----CHHHHH
Confidence            368899999998888754322             11 1122222221111111  12467778889741     455677


Q ss_pred             HHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         120 LLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++++++|+|||+|+.....   ......+.+|+.|+.+++++|++.+
T Consensus        87 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~  133 (372)
T 3slg_A           87 YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG  133 (372)
T ss_dssp             HHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred             HHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            7778999999999976533   2455678999999999999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.71  E-value=5.9e-05  Score=54.60  Aligned_cols=82  Identities=11%  Similarity=0.031  Sum_probs=55.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+.+++|+|||+|+...         ..|+.++.++++.+++. +.++++++||...
T Consensus        44 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           44 QGITVRQADYGDE------AALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHA  107 (286)
T ss_dssp             TTCEEEECCTTCH------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTT
T ss_pred             CCCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCC
Confidence            3688999999984      457788889999999998521         25788999999999874 5677889988765


Q ss_pred             cceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          94 HFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        94 ~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      +.         .  ...|+.++...++++
T Consensus       108 ~~---------~--~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A          108 DT---------S--PLGLADEHIETEKML  125 (286)
T ss_dssp             TT---------C--CSTTHHHHHHHHHHH
T ss_pred             CC---------C--cchhHHHHHHHHHHH
Confidence            41         0  124555666666655

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.70  E-value=0.00015  Score=52.32  Aligned_cols=73  Identities=19%  Similarity=0.198  Sum_probs=52.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++      +.++.+.+       ++|+|||+||.....         ..+...+++|+.|+.++.+.+..
T Consensus        65 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  138 (278)
T 2bgk_A           65 VISFVHCDVTKD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR  138 (278)
T ss_dssp             TEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            689999999985      34554443       789999999975321         34456889999999999988766


Q ss_pred             Hh---ccchhhcccccCc
Q psy3446          79 IR---QLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~~---~~~~~~~~ss~~~   93 (166)
                      ..   +...++++||...
T Consensus       139 ~~~~~~~~~iv~isS~~~  156 (278)
T 2bgk_A          139 VMIPAKKGSIVFTASISS  156 (278)
T ss_dssp             HHGGGTCEEEEEECCGGG
T ss_pred             HHhhcCCCeEEEEeeccc
Confidence            42   2346777777544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.67  E-value=0.00025  Score=50.59  Aligned_cols=92  Identities=16%  Similarity=0.101  Sum_probs=54.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec----------chhhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR----------FDEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~----------~~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||...          -...+...+++|+.|+.++.+.+
T Consensus        58 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  131 (253)
T 3qiv_A           58 GTAISVAVDVSDP------ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAV  131 (253)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence            4688999999995      33444433       7899999999731          12234568899999977766654


Q ss_pred             HHH---hccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          77 REI---RQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        77 ~~~---~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ...   .+...++++||....           .....|+.+|...+.+.
T Consensus       132 ~~~~~~~~~g~iv~isS~~~~-----------~~~~~Y~asK~a~~~~~  169 (253)
T 3qiv_A          132 YKKMTKRGGGAIVNQSSTAAW-----------LYSNYYGLAKVGINGLT  169 (253)
T ss_dssp             HHHHHHHTCEEEEEECC----------------------CCHHHHHHHH
T ss_pred             HHHHHhcCCCEEEEECCcccc-----------CCCchhHHHHHHHHHHH
Confidence            332   223457777775442           11345778887666543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.63  E-value=9.6e-05  Score=53.07  Aligned_cols=74  Identities=11%  Similarity=0.071  Sum_probs=53.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....       ...+...+.+|+.|+.++++.+...
T Consensus        54 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  127 (276)
T 1wma_A           54 LSPRFHQLDIDDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL  127 (276)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             CeeEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence            4688999999984      33444444       78999999997532       2445668899999999999988764


Q ss_pred             h-ccchhhcccccCc
Q psy3446          80 R-QLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~-~~~~~~~~ss~~~   93 (166)
                      . +..+++++||...
T Consensus       128 ~~~~g~iv~~sS~~~  142 (276)
T 1wma_A          128 IKPQGRVVNVSSIMS  142 (276)
T ss_dssp             EEEEEEEEEECCHHH
T ss_pred             hCCCCEEEEECChhh
Confidence            2 2236777877543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.62  E-value=0.00023  Score=50.81  Aligned_cols=74  Identities=16%  Similarity=0.140  Sum_probs=51.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec-c-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR-F-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~-~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||... .       ...+...+++|+.|+.++.+.+..
T Consensus        62 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  135 (260)
T 3awd_A           62 HDVSSVVMDVTNT------ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR  135 (260)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4689999999985      33444433       6899999999654 1       122356789999999999887764


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       136 ~~~~~~~~~iv~~sS~~~  153 (260)
T 3awd_A          136 IMLEQKQGVIVAIGSMSG  153 (260)
T ss_dssp             HHHHHTCEEEEEECCGGG
T ss_pred             HHhhcCCCEEEEEecchh
Confidence            2   23456777777554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.62  E-value=1.4e-05  Score=55.55  Aligned_cols=72  Identities=11%  Similarity=-0.034  Sum_probs=53.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++.      .+.++.  +|+|||+|+.... ..+....+++|+.++.++++.+++. +.+.++++||..
T Consensus        46 ~~~~~~~~D~~~~~------~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~  116 (215)
T 2a35_A           46 PRLDNPVGPLAELL------PQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALG  116 (215)
T ss_dssp             TTEECCBSCHHHHG------GGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTT
T ss_pred             CCceEEeccccCHH------HHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcc
Confidence            46888899988742      233333  8999999997653 2345667899999999999999874 456788888876


Q ss_pred             cc
Q psy3446          93 PH   94 (166)
Q Consensus        93 ~~   94 (166)
                      .+
T Consensus       117 ~~  118 (215)
T 2a35_A          117 AD  118 (215)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.62  E-value=5.9e-06  Score=57.85  Aligned_cols=65  Identities=6%  Similarity=-0.015  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++..        ....++|+|||+|+......    ...+|+.++.++++.+++. + .+++++||..
T Consensus        43 ~~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~  107 (224)
T 3h2s_A           43 ATVATLVKEPLVLTE--------ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSA  107 (224)
T ss_dssp             TTSEEEECCGGGCCH--------HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGG
T ss_pred             CCceEEecccccccH--------hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecce
Confidence            479999999999752        55678999999999862111    2457999999999999874 4 6788887753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.61  E-value=0.00016  Score=53.82  Aligned_cols=96  Identities=18%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      -.|+-+||++++|.++...+             ++++..+..+.+..+.     .++..+.+|+.      +...+.+++
T Consensus        20 ~~vlVtGatG~iG~~l~~~L-------------~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~------d~~~~~~~~   75 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAAL-------------RTQGRTVRGFDLRPSG-----TGGEEVVGSLE------DGQALSDAI   75 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHH-------------HHTTCCEEEEESSCCS-----SCCSEEESCTT------CHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHH-------------HhCCCEEEEEeCCCCC-----CCccEEecCcC------CHHHHHHHH
Confidence            46888999998887764432             2222222222221111     35566778874      456678888


Q ss_pred             ccccEEEEccccccchH-HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 TNVNVIFHGAATVRFDE-KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~~-~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++|+|||+|+...+.. .....+.+|+.|+.+++++|.+.
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~  116 (347)
T 4id9_A           76 MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA  116 (347)
T ss_dssp             TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            89999999999766543 34778999999999999999875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.60  E-value=0.00022  Score=51.73  Aligned_cols=72  Identities=14%  Similarity=0.211  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHH----H
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLE----L   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~----l   75 (166)
                      .+++++.+|++++      +.++.+.+       ++|+|||+||.....       ..+...+++|+.|+.++.+    .
T Consensus        51 ~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  124 (281)
T 3m1a_A           51 DRAEAISLDVTDG------ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ  124 (281)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEeeCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999995      33444443       689999999976431       2345578999999555444    4


Q ss_pred             HHHHhccchhhcccccC
Q psy3446          76 AREIRQLKLFLRLKTEV   92 (166)
Q Consensus        76 ~~~~~~~~~~~~~ss~~   92 (166)
                      .++. +...++++||..
T Consensus       125 ~~~~-~~~~iv~~sS~~  140 (281)
T 3m1a_A          125 MRER-GSGSVVNISSFG  140 (281)
T ss_dssp             HHHH-TCEEEEEECCGG
T ss_pred             HHhc-CCCEEEEEcCcc
Confidence            4442 345677777743

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.58  E-value=0.00024  Score=50.22  Aligned_cols=74  Identities=7%  Similarity=0.152  Sum_probs=51.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---------CccEEEEcceeec-c-------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---------NVNVIFHGAATVR-F-------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---------~~d~Vih~aa~~~-~-------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|++++      +.++.+.+         ++|+|||+||... .       ...+...+++|+.|+.++.+.+
T Consensus        51 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  124 (250)
T 1yo6_A           51 SRVHVLPLTVTCD------KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL  124 (250)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred             CceEEEEeecCCH------HHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            4789999999985      33444443         7999999999765 1       2334567899999999988876


Q ss_pred             HHHh---------c-----cchhhcccccCc
Q psy3446          77 REIR---------Q-----LKLFLRLKTEVP   93 (166)
Q Consensus        77 ~~~~---------~-----~~~~~~~ss~~~   93 (166)
                      ....         +     ...++++||...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A          125 LPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            5431         1     345677777544

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.57  E-value=0.00028  Score=49.96  Aligned_cols=74  Identities=15%  Similarity=0.222  Sum_probs=51.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  131 (244)
T 2bd0_A           58 ALTDTITADISDM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL  131 (244)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeeeEEEecCCCH------HHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       689999999975431       234567899999999998876542


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       132 ~~~~~~~~iv~isS~~~  148 (244)
T 2bd0_A          132 MERQHSGHIFFITSVAA  148 (244)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHhCCCCEEEEEecchh
Confidence               23456777777544

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.57  E-value=0.00045  Score=50.66  Aligned_cols=58  Identities=26%  Similarity=0.350  Sum_probs=43.2

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccc--hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~--~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +..+.+|+.      +...+.++++  ++|+|||+|+....  .......+.+|+.|+.+++++|++.
T Consensus        41 ~~~~~~D~~------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  102 (317)
T 3ajr_A           41 IKFITLDVS------NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH  102 (317)
T ss_dssp             CCEEECCTT------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEecCC------CHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc
Confidence            345667764      3455667666  79999999996542  2345668899999999999999875

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.57  E-value=3.5e-05  Score=54.83  Aligned_cols=70  Identities=17%  Similarity=0.074  Sum_probs=49.8

Q ss_pred             EecCCCCCCCCCCHHhHHHHhc----CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh---ccchhhccccc
Q psy3446          19 VAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR---QLKLFLRLKTE   91 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~----~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~---~~~~~~~~ss~   91 (166)
                      +.+|++++      +.++.+.+    ++|+|||+||......++...+++|+.|+.++++.+....   +..+++++||.
T Consensus        42 ~~~D~~~~------~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  115 (255)
T 2dkn_A           42 LSTPGGRE------TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI  115 (255)
T ss_dssp             TTSHHHHH------HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ccCCcccH------HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence            44565552      33455554    7999999999876445667789999999999999877641   23567888876


Q ss_pred             Ccc
Q psy3446          92 VPH   94 (166)
Q Consensus        92 ~~~   94 (166)
                      ..+
T Consensus       116 ~~~  118 (255)
T 2dkn_A          116 AAT  118 (255)
T ss_dssp             GGG
T ss_pred             ccc
Confidence            554

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.55  E-value=0.0003  Score=50.04  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=51.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  127 (246)
T 3osu_A           54 VDSFAIQANVADA------DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ  127 (246)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999985      34444443       78999999997632       2234568899999999999887432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       128 ~~~~~~g~iv~isS~~  143 (246)
T 3osu_A          128 MLRQRSGAIINLSSVV  143 (246)
T ss_dssp             HHHHTCEEEEEECCHH
T ss_pred             HHHcCCCEEEEEcchh
Confidence               2334567777643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.55  E-value=0.00011  Score=53.99  Aligned_cols=96  Identities=13%  Similarity=-0.010  Sum_probs=62.9

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      .|+-+||++++|.++...+.             +++..+..+.+.+. ... ..++.++.+|+.       ...+.++++
T Consensus         4 ~vlVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~-~~~-~~~~~~~~~Dl~-------~~~~~~~~~   61 (311)
T 3m2p_A            4 KIAVTGGTGFLGQYVVESIK-------------NDGNTPIILTRSIG-NKA-INDYEYRVSDYT-------LEDLINQLN   61 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEESCCC-------CCEEEECCCC-------HHHHHHHTT
T ss_pred             EEEEECCCcHHHHHHHHHHH-------------hCCCEEEEEeCCCC-ccc-CCceEEEEcccc-------HHHHHHhhc
Confidence            47788888888877644322             22122222222211 111 225666778863       466788888


Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|+|||+|+..... .....+..|+.|+.+++++|++.
T Consensus        62 ~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~   99 (311)
T 3m2p_A           62 DVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN   99 (311)
T ss_dssp             TCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999987655 55667889999999999999875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.55  E-value=4.7e-05  Score=59.97  Aligned_cols=57  Identities=23%  Similarity=0.313  Sum_probs=42.3

Q ss_pred             eeeEeecCCCCC-CCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          97 EKISAVAGDVSL-PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        97 ~~~~~v~gD~~~-~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .++.++.+|+.+ +.++        +..++|+|||+||...+..++..++.+|+.|+.+++++|.+
T Consensus       211 ~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~  268 (508)
T 4f6l_B          211 SNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  268 (508)
T ss_dssp             TTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEecCCcccccCC--------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            467888999987 4454        55789999999999888888888999999999999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.54  E-value=0.00033  Score=50.16  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=51.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------------hhhHHHHHHhhhhcHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------------DEKIQLAVAINVLGVRAML   73 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------------~~~~~~~~~~nv~gt~~ll   73 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....             ...+...+++|+.|+.++.
T Consensus        58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  131 (265)
T 2o23_A           58 NNCVFAPADVTSE------KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI  131 (265)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence            3689999999984      34555444       79999999997532             2234568899999999999


Q ss_pred             HHHHHHh---------ccchhhcccccC
Q psy3446          74 ELAREIR---------QLKLFLRLKTEV   92 (166)
Q Consensus        74 ~l~~~~~---------~~~~~~~~ss~~   92 (166)
                      +.+....         +...++++||..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~iv~isS~~  159 (265)
T 2o23_A          132 RLVAGEMGQNEPDQGGQRGVIINTASVA  159 (265)
T ss_dssp             HHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             HHHHHHHHhcccccCCCCcEEEEeCChh
Confidence            8877642         224566666643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.53  E-value=0.00025  Score=52.60  Aligned_cols=100  Identities=11%  Similarity=0.000  Sum_probs=58.0

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc-ceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH-FLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~-~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .|+-+||++++|.++...+.             +++..+..+.+-...... ...++.++.+|+.      +...+.+++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~------d~~~~~~~~   75 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIR-------------AAGHDLVLIHRPSSQIQRLAYLEPECRVAEML------DHAGLERAL   75 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHH-------------HTTCEEEEEECTTSCGGGGGGGCCEEEECCTT------CHHHHHHHT
T ss_pred             EEEEECCCcHHHHHHHHHHH-------------HCCCEEEEEecChHhhhhhccCCeEEEEecCC------CHHHHHHHH
Confidence            58889999988888744322             111122222211111000 1125567788864      346678888


Q ss_pred             ccccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 TNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++|+|||+|+.... ..+...++.+|+.|+.+++++|.+.
T Consensus        76 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  116 (342)
T 2x4g_A           76 RGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA  116 (342)
T ss_dssp             TTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            899999999996543 2345668899999999999999875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.53  E-value=5.4e-05  Score=52.26  Aligned_cols=70  Identities=13%  Similarity=0.125  Sum_probs=52.1

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      +++.+|++++      +.+..+.+   ++|+|||+||.....       ..+...+.+|+.|+.++++.+++ .+...++
T Consensus        45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv  117 (207)
T 2yut_A           45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF-QKGARAV  117 (207)
T ss_dssp             EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE-EEEEEEE
T ss_pred             cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh-cCCcEEE
Confidence            7899999984      44666666   899999999975432       23456789999999999998843 3445677


Q ss_pred             cccccCc
Q psy3446          87 RLKTEVP   93 (166)
Q Consensus        87 ~~ss~~~   93 (166)
                      ++||...
T Consensus       118 ~~sS~~~  124 (207)
T 2yut_A          118 FFGAYPR  124 (207)
T ss_dssp             EECCCHH
T ss_pred             EEcChhh
Confidence            8877644

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.52  E-value=0.00035  Score=50.52  Aligned_cols=74  Identities=12%  Similarity=0.180  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||....           ...+...+.+|+.|+.++.+.
T Consensus        58 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  131 (278)
T 1spx_A           58 QNVNSVVADVTTD------AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK  131 (278)
T ss_dssp             GGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceeEEecccCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            4688999999985      34455444       79999999997532           223455789999999999887


Q ss_pred             HHHHh--ccchhhcccccCc
Q psy3446          76 AREIR--QLKLFLRLKTEVP   93 (166)
Q Consensus        76 ~~~~~--~~~~~~~~ss~~~   93 (166)
                      +....  ....++++||...
T Consensus       132 ~~~~~~~~~g~iv~isS~~~  151 (278)
T 1spx_A          132 AVPHLSSTKGEIVNISSIAS  151 (278)
T ss_dssp             HHHHHHHHTCEEEEECCTTS
T ss_pred             HHHHHhhcCCeEEEEecccc
Confidence            76531  1256777777543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.52  E-value=0.00022  Score=50.51  Aligned_cols=73  Identities=14%  Similarity=0.205  Sum_probs=46.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        55 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  128 (247)
T 2hq1_A           55 INVVVAKGDVKNP------EDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI  128 (247)
T ss_dssp             CCEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999976421       123457889999998888776542


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       129 ~~~~~~~~iv~~sS~~  144 (247)
T 2hq1_A          129 MLKQKSGKIINITSIA  144 (247)
T ss_dssp             HHHHTCEEEEEECC--
T ss_pred             HHhcCCcEEEEEcChh
Confidence               2335677777753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.52  E-value=0.00025  Score=50.21  Aligned_cols=73  Identities=10%  Similarity=0.067  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  130 (248)
T 2pnf_A           57 VKAHGVEMNLLSE------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK  130 (248)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            3688999999984      34555443       78999999997542       1234567899999997776654321


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       131 ~~~~~~~~iv~~sS~~  146 (248)
T 2pnf_A          131 MIKQRWGRIVNISSVV  146 (248)
T ss_dssp             HHHHTCEEEEEECCHH
T ss_pred             HHhcCCcEEEEEccHH
Confidence               2345677777753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.51  E-value=0.00034  Score=50.19  Aligned_cols=60  Identities=13%  Similarity=0.153  Sum_probs=44.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---------CccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---------~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|++++.      .++.+.+         ++|+|||+||...    +    ...+...+++|+.|+.++.+.+
T Consensus        72 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  145 (267)
T 1sny_A           72 SNIHILEIDLRNFD------AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC  145 (267)
T ss_dssp             TTEEEEECCTTCGG------GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEEEEecCCChH------HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence            37899999999863      3444433         6999999999754    1    2334567899999999999877


Q ss_pred             HHH
Q psy3446          77 REI   79 (166)
Q Consensus        77 ~~~   79 (166)
                      ...
T Consensus       146 ~~~  148 (267)
T 1sny_A          146 LPL  148 (267)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.49  E-value=0.00045  Score=48.99  Aligned_cols=74  Identities=16%  Similarity=0.189  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch----------hhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD----------EKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~----------~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+|+.....          ..+...+.+|+.|+.++.+.+
T Consensus        52 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  125 (250)
T 2cfc_A           52 DKVLRVRADVADE------GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAV  125 (250)
T ss_dssp             GGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            4689999999984      33444443       789999999975422          234567889999998777665


Q ss_pred             HHH---hccchhhcccccCc
Q psy3446          77 REI---RQLKLFLRLKTEVP   93 (166)
Q Consensus        77 ~~~---~~~~~~~~~ss~~~   93 (166)
                      ...   .+...++++||...
T Consensus       126 ~~~~~~~~~~~iv~isS~~~  145 (250)
T 2cfc_A          126 LPHMLLQGAGVIVNIASVAS  145 (250)
T ss_dssp             HHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHhCCCCEEEEECChhh
Confidence            432   23456777777543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.48  E-value=0.00034  Score=49.29  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=52.8

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecchh-----------hHHHHHHhhhhcHHHHHHH
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRFDE-----------KIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~~~-----------~~~~~~~~nv~gt~~ll~l   75 (166)
                      ..++.++.+|++++      +.++++.+      .+|+|||+|+......           .+...+++|+.|+.++.+.
T Consensus        38 ~~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  111 (242)
T 1uay_A           38 GEDLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL  111 (242)
T ss_dssp             SSSSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccceEEEeCCCCCH------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHH
Confidence            34678999999984      34555554      7899999999754321           5567889999999999998


Q ss_pred             HHHHhcc---------chhhcccccCc
Q psy3446          76 AREIRQL---------KLFLRLKTEVP   93 (166)
Q Consensus        76 ~~~~~~~---------~~~~~~ss~~~   93 (166)
                      +......         ..++++||...
T Consensus       112 ~~~~~~~~~~~~~~~~~~iv~~sS~~~  138 (242)
T 1uay_A          112 AAWAMRENPPDAEGQRGVIVNTASVAA  138 (242)
T ss_dssp             HHHHHTTCCCCTTSCSEEEEEECCTHH
T ss_pred             HHHHHHhcCCCCCCCCeEEEEeCChhh
Confidence            7764221         15667766543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.47  E-value=9.7e-05  Score=58.43  Aligned_cols=73  Identities=22%  Similarity=0.277  Sum_probs=53.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC--ccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHhccch
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIRQLKL   84 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~--~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~~~~~   84 (166)
                      .++.++.+|++++      +.+..+.++  +|.|||+|+....+       ..+...+.+|+.|+.++.+++........
T Consensus       312 ~~v~~~~~Dvtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~  385 (511)
T 2z5l_A          312 CEVVHAACDVAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA  385 (511)
T ss_dssp             CEEEEEECCSSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred             CEEEEEEeCCCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence            3689999999984      446666654  99999999976432       23455788999999999988765324456


Q ss_pred             hhcccccC
Q psy3446          85 FLRLKTEV   92 (166)
Q Consensus        85 ~~~~ss~~   92 (166)
                      |+++||..
T Consensus       386 ~V~~SS~a  393 (511)
T 2z5l_A          386 FVLFSSVT  393 (511)
T ss_dssp             EEEEEEGG
T ss_pred             EEEEeCHH
Confidence            77777753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.47  E-value=0.00031  Score=50.75  Aligned_cols=77  Identities=12%  Similarity=0.034  Sum_probs=51.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch------------------hhHHHHHHhhhhc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD------------------EKIQLAVAINVLG   68 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~------------------~~~~~~~~~nv~g   68 (166)
                      .++.++.+|++++..  ..+.++.+.+       .+|++||+||.....                  ..+...+++|+.|
T Consensus        62 ~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g  139 (276)
T 1mxh_A           62 GSAVLCKGDLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA  139 (276)
T ss_dssp             TCEEEEECCCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred             CceEEEeccCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHH
Confidence            468899999998611  0022343333       689999999975322                  4455688999999


Q ss_pred             HHHHHHHHHHHh--cc------chhhcccccC
Q psy3446          69 VRAMLELAREIR--QL------KLFLRLKTEV   92 (166)
Q Consensus        69 t~~ll~l~~~~~--~~------~~~~~~ss~~   92 (166)
                      +.++.+.+....  +.      ..++++||..
T Consensus       140 ~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~  171 (276)
T 1mxh_A          140 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  171 (276)
T ss_dssp             HHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence            999998876532  12      4566666654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.46  E-value=0.00039  Score=49.84  Aligned_cols=74  Identities=19%  Similarity=0.174  Sum_probs=51.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  127 (259)
T 4e6p_A           54 PAAYAVQMDVTRQ------DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ  127 (259)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      33444444       799999999975322       234567889999999999877543


Q ss_pred             h-c---cchhhcccccCc
Q psy3446          80 R-Q---LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~-~---~~~~~~~ss~~~   93 (166)
                      . +   ...++++||...
T Consensus       128 ~~~~~~~g~iv~isS~~~  145 (259)
T 4e6p_A          128 MIAQGRGGKIINMASQAG  145 (259)
T ss_dssp             HHHHTSCEEEEEECCGGG
T ss_pred             HHhcCCCeEEEEECChhh
Confidence            2 1   235677776543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.46  E-value=0.00052  Score=51.91  Aligned_cols=101  Identities=16%  Similarity=-0.068  Sum_probs=64.7

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-cceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-HFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      -.|+-+||++++|.++...+.             ++...+..+.+-..... ....++.++.+|+.      +...++++
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~------d~~~~~~~   90 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLK-------------HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLR------VMENCLKV   90 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEESSCCSSSCGGGTCSEEEECCTT------SHHHHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHH-------------HCCCeEEEEECCCccchhhccCCceEEECCCC------CHHHHHHH
Confidence            368899999988877644321             11112222221111110 11134566778864      34567788


Q ss_pred             hccccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         122 RTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       122 ~~~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++++|+|||+|+....    ..+...++.+|+.|+.+++++|++.
T Consensus        91 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~  135 (379)
T 2c5a_A           91 TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN  135 (379)
T ss_dssp             HTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            8899999999997543    2346778899999999999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.46  E-value=0.00039  Score=49.60  Aligned_cols=74  Identities=19%  Similarity=0.282  Sum_probs=51.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhc-----
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQ-----   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~-----   81 (166)
                      .++.++.+|++++.     +..+.+.       .++|+|||+||... ...+...+++|+.|+.++.+.+.....     
T Consensus        55 ~~~~~~~~D~~~~~-----~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  128 (254)
T 1sby_A           55 VNITFHTYDVTVPV-----AESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGG  128 (254)
T ss_dssp             SEEEEEECCTTSCH-----HHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred             ceEEEEEEecCCCh-----HHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCC
Confidence            36889999999861     1233332       37899999999754 345567889999999999988765421     


Q ss_pred             -cchhhcccccCc
Q psy3446          82 -LKLFLRLKTEVP   93 (166)
Q Consensus        82 -~~~~~~~ss~~~   93 (166)
                       ...++++||...
T Consensus       129 ~~g~iv~isS~~~  141 (254)
T 1sby_A          129 PGGIIANICSVTG  141 (254)
T ss_dssp             CCEEEEEECCGGG
T ss_pred             CCCEEEEECchhh
Confidence             134677776543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.46  E-value=0.00046  Score=51.35  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=51.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.+..+.+       ++|++||+||....+       ..+...+++|+.|+.++.+.+...
T Consensus        59 ~~~~~~~~Dvtd~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~  132 (324)
T 3u9l_A           59 VDLRTLELDVQSQ------VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPH  132 (324)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999985      34454444       799999999975422       233557899999999999887322


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       133 m~~~~~g~iV~isS~~  148 (324)
T 3u9l_A          133 MRRQKHGLLIWISSSS  148 (324)
T ss_dssp             HHHHTCEEEEEECCGG
T ss_pred             HHhcCCCEEEEEecch
Confidence               2334566776654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.45  E-value=0.00057  Score=49.36  Aligned_cols=74  Identities=15%  Similarity=0.101  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        80 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  153 (272)
T 1yb1_A           80 AKVHTFVVDCSNR------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA  153 (272)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEEeeCCCH------HHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3689999999985      33444333       689999999975432       233567899999988877766432


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       154 ~~~~~~~~iv~isS~~~  170 (272)
T 1yb1_A          154 MTKNNHGHIVTVASAAG  170 (272)
T ss_dssp             HHHTTCEEEEEECCCC-
T ss_pred             HHhcCCCEEEEEechhh
Confidence               23456777777543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.44  E-value=0.0006  Score=48.17  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=52.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---c
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---Q   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---~   81 (166)
                      +++++.+|++++      +.++.+.+   .+|+|||+||.....       ..+...+++|+.|+.++.+.+....   +
T Consensus        53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  126 (244)
T 1cyd_A           53 GIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG  126 (244)
T ss_dssp             TCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEecCCCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC
Confidence            577889999984      44666655   479999999965421       2345678999999999988776531   2


Q ss_pred             -cchhhcccccCc
Q psy3446          82 -LKLFLRLKTEVP   93 (166)
Q Consensus        82 -~~~~~~~ss~~~   93 (166)
                       ...++++||...
T Consensus       127 ~~~~iv~~sS~~~  139 (244)
T 1cyd_A          127 VPGSIVNVSSMVA  139 (244)
T ss_dssp             CCEEEEEECCGGG
T ss_pred             CCeEEEEEcchhh
Confidence             346778887654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.43  E-value=0.00061  Score=48.89  Aligned_cols=74  Identities=18%  Similarity=0.129  Sum_probs=51.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  130 (263)
T 3ai3_A           57 VRVLEVAVDVATP------EGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG  130 (263)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999985      33444443       78999999997532       2234567899999999988876532


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       131 ~~~~~~g~iv~isS~~~  147 (263)
T 3ai3_A          131 MRARGGGAIIHNASICA  147 (263)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHHcCCcEEEEECchhh
Confidence               23356777777654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.43  E-value=0.00039  Score=48.45  Aligned_cols=62  Identities=16%  Similarity=0.260  Sum_probs=48.0

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..+++++.+|++++      +.+..+.+++|+|||+|+..            |+. ++++++.+++ .+..+++++|+..
T Consensus        51 ~~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~  110 (221)
T 3r6d_A           51 HERVTVIEGSFQNP------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSR-XNIRRVIGVSMAG  110 (221)
T ss_dssp             STTEEEEECCTTCH------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETT
T ss_pred             CCceEEEECCCCCH------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeece
Confidence            35789999999984      56778888999999999864            333 7888888876 3456788888876


Q ss_pred             cc
Q psy3446          93 PH   94 (166)
Q Consensus        93 ~~   94 (166)
                      .+
T Consensus       111 ~~  112 (221)
T 3r6d_A          111 LS  112 (221)
T ss_dssp             TT
T ss_pred             ec
Confidence            54

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.43  E-value=0.00063  Score=48.91  Aligned_cols=73  Identities=18%  Similarity=0.137  Sum_probs=51.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +..+.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        60 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  133 (262)
T 3pk0_A           60 GKVIGVQTDVSDR------AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA  133 (262)
T ss_dssp             SCEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4789999999995      33444433       78999999997532       1234557899999999998877653


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       134 m~~~~~g~iv~isS~~  149 (262)
T 3pk0_A          134 LIASGSGRVVLTSSIT  149 (262)
T ss_dssp             HHHHSSCEEEEECCSB
T ss_pred             HHhcCCcEEEEEechh
Confidence               1334567777654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.43  E-value=0.00015  Score=52.95  Aligned_cols=73  Identities=11%  Similarity=0.099  Sum_probs=54.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecc-----hhhHHHHHHhhhhcHHHHHHHHHHHhccchh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRF-----DEKIQLAVAINVLGVRAMLELAREIRQLKLF   85 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~-----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~   85 (166)
                      .++.++.+|++++      +.++++.+   ++|++||+||....     ...++..+++|+.|+.++.+.+.... .+++
T Consensus        62 ~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~ri  134 (291)
T 3rd5_A           62 GQVEVRELDLQDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRV  134 (291)
T ss_dssp             SEEEEEECCTTCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEE
T ss_pred             CCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhe
Confidence            4789999999984      44666665   57999999997542     12335678999999999999887643 3467


Q ss_pred             hcccccCc
Q psy3446          86 LRLKTEVP   93 (166)
Q Consensus        86 ~~~ss~~~   93 (166)
                      +++||...
T Consensus       135 v~isS~~~  142 (291)
T 3rd5_A          135 VTVSSMAH  142 (291)
T ss_dssp             EEECCGGG
T ss_pred             eEeechhh
Confidence            78877654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.43  E-value=0.0006  Score=48.80  Aligned_cols=74  Identities=15%  Similarity=0.146  Sum_probs=51.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        53 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  126 (258)
T 3a28_C           53 QKAVFVGLDVTDK------ANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK  126 (258)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999975431       234567899999999998877653


Q ss_pred             ---hcc-chhhcccccCc
Q psy3446          80 ---RQL-KLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~-~~~~~~ss~~~   93 (166)
                         .+. ..++++||...
T Consensus       127 ~~~~~~~g~iv~isS~~~  144 (258)
T 3a28_C          127 FDELGVKGKIINAASIAA  144 (258)
T ss_dssp             HHHHTCCCEEEEECCGGG
T ss_pred             HHhcCCCcEEEEECcchh
Confidence               122 46777777543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.42  E-value=0.00058  Score=49.08  Aligned_cols=73  Identities=19%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +..+.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        68 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  141 (260)
T 3un1_A           68 PDIHTVAGDISKP------ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAE  141 (260)
T ss_dssp             TTEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3689999999985      34444443       79999999997532       1234567889999999999876432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       142 m~~~~~g~iv~isS~~  157 (260)
T 3un1_A          142 MLKQGSGHIVSITTSL  157 (260)
T ss_dssp             HHHTTCEEEEEECCTT
T ss_pred             HHHcCCcEEEEEechh
Confidence               2334566776654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.42  E-value=0.00047  Score=49.91  Aligned_cols=74  Identities=12%  Similarity=0.137  Sum_probs=52.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch---hhHHHHHHhhhhcHHHHHHHHHHHh---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR---   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~---~~~~~~~~~nv~gt~~ll~l~~~~~---   80 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....   ..+...+++|+.|+.++.+.+....   
T Consensus        74 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  147 (278)
T 3sx2_A           74 SRIVARQADVRDR------ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ  147 (278)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            4789999999985      34444443       789999999986543   3446688999999999998765432   


Q ss_pred             -ccchhhcccccCc
Q psy3446          81 -QLKLFLRLKTEVP   93 (166)
Q Consensus        81 -~~~~~~~~ss~~~   93 (166)
                       ....++++||...
T Consensus       148 ~~~g~iv~isS~~~  161 (278)
T 3sx2_A          148 GTGGSIVLISSSAG  161 (278)
T ss_dssp             CSCEEEEEECCGGG
T ss_pred             CCCcEEEEEccHHh
Confidence             1235677776543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.42  E-value=0.0003  Score=52.52  Aligned_cols=56  Identities=14%  Similarity=0.249  Sum_probs=45.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .+++++.||+++      .+.+..+++  ++|+|||+||..            |+.++.++++.|++....++|+.
T Consensus        60 ~~v~~~~~Dl~d------~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           60 KGAIIVYGLINE------QEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             TTCEEEECCTTC------HHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCcEEEEeecCC------HHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee
Confidence            479999999998      456778888  999999999972            88999999999988542566654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.42  E-value=0.00033  Score=50.09  Aligned_cols=73  Identities=16%  Similarity=0.155  Sum_probs=50.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------Cc-cEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NV-NVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~-d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       .+ |+|||+|+....       ...+...+++|+.|+.++.+.+..
T Consensus        63 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  136 (264)
T 2pd6_A           63 GNHAAFQADVSEA------RAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ  136 (264)
T ss_dssp             -CCEEEECCTTSH------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cceEEEEecCCCH------HHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence            4688999999984      33444433       34 999999997542       223456789999999999988765


Q ss_pred             Hh---c-cchhhcccccC
Q psy3446          79 IR---Q-LKLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~-~~~~~~~ss~~   92 (166)
                      ..   + ...++++||..
T Consensus       137 ~~~~~~~~g~iv~isS~~  154 (264)
T 2pd6_A          137 ALVSNGCRGSIINISSIV  154 (264)
T ss_dssp             HHHHHTCCEEEEEECCTH
T ss_pred             HHHhcCCCceEEEECChh
Confidence            32   1 24577777753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.42  E-value=0.00061  Score=50.24  Aligned_cols=100  Identities=20%  Similarity=0.125  Sum_probs=61.6

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-cceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-HFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .|+-+||++++|..+...+.             +++..+..+.+..+... ....++..+.+|+.      +...+++++
T Consensus         3 ~ilVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~------~~~~~~~~~   63 (330)
T 2c20_A            3 SILICGGAGYIGSHAVKKLV-------------DEGLSVVVVDNLQTGHEDAITEGAKFYNGDLR------DKAFLRDVF   63 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEECCSSCCGGGSCTTSEEEECCTT------CHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHH-------------hCCCEEEEEeCCCcCchhhcCCCcEEEECCCC------CHHHHHHHH
Confidence            47788888888877644321             11112222221111100 01114556778864      345577777


Q ss_pred             c--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 T--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +  ++|+|||+|+.....   .+....+.+|+.|+.+++++|++.
T Consensus        64 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  108 (330)
T 2c20_A           64 TQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF  108 (330)
T ss_dssp             HHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc
Confidence            6  899999999976433   345668899999999999999875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.41  E-value=0.00026  Score=49.47  Aligned_cols=97  Identities=8%  Similarity=-0.041  Sum_probs=60.7

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      .|+-+||++++|..+...+.             ++...+..+.+..+.......++.++.+|+.      +...++++++
T Consensus         6 ~ilItGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~------d~~~~~~~~~   66 (227)
T 3dhn_A            6 KIVLIGASGFVGSALLNEAL-------------NRGFEVTAVVRHPEKIKIENEHLKVKKADVS------SLDEVCEVCK   66 (227)
T ss_dssp             EEEEETCCHHHHHHHHHHHH-------------TTTCEEEEECSCGGGCCCCCTTEEEECCCTT------CHHHHHHHHT
T ss_pred             EEEEEcCCchHHHHHHHHHH-------------HCCCEEEEEEcCcccchhccCceEEEEecCC------CHHHHHHHhc
Confidence            57888999888877644332             1111222222221111111246677888874      4567888888


Q ss_pred             cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|+|||+|+... .  ...++.+|+.|+.+++++|++.
T Consensus        67 ~~d~vi~~a~~~~-~--~~~~~~~n~~~~~~l~~~~~~~  102 (227)
T 3dhn_A           67 GADAVISAFNPGW-N--NPDIYDETIKVYLTIIDGVKKA  102 (227)
T ss_dssp             TCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCcCCC-C--ChhHHHHHHHHHHHHHHHHHHh
Confidence            9999999997542 1  1236788999999999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.40  E-value=0.00052  Score=49.02  Aligned_cols=73  Identities=16%  Similarity=0.105  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.+..+.+       ++|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  130 (261)
T 1gee_A           57 GEAIAVKGDVTVE------SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY  130 (261)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            3688999999984      33444433       78999999997542       1234567899999999888876543


Q ss_pred             h---c-cchhhcccccC
Q psy3446          80 R---Q-LKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~-~~~~~~~ss~~   92 (166)
                      .   + ...++++||..
T Consensus       131 ~~~~~~~~~iv~isS~~  147 (261)
T 1gee_A          131 FVENDIKGTVINMSSVH  147 (261)
T ss_dssp             HHHTTCCCEEEEECCGG
T ss_pred             HHhCCCCCEEEEeCCHH
Confidence            2   1 34677777754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.38  E-value=0.00066  Score=48.73  Aligned_cols=72  Identities=14%  Similarity=0.119  Sum_probs=49.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++      +.++.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+... 
T Consensus        54 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  127 (260)
T 1nff_A           54 AARYVHLDVTQP------AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPM  127 (260)
T ss_dssp             GEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            488999999985      34555544       79999999997543       2234568899999997776654321 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       128 ~~~~~g~iv~isS~~  142 (260)
T 1nff_A          128 KEAGRGSIINISSIE  142 (260)
T ss_dssp             HHHTCEEEEEECCGG
T ss_pred             HhcCCCEEEEEeehh
Confidence              2335677777754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.38  E-value=0.00069  Score=48.56  Aligned_cols=72  Identities=14%  Similarity=0.248  Sum_probs=49.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec-----c----hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR-----F----DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~-----~----~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||...     +    ...+...+++|+.|+.++.+.+.
T Consensus        57 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  130 (264)
T 3i4f_A           57 ERLQFVQADVTKK------EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV  130 (264)
T ss_dssp             GGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            5799999999985      33444433       7899999999321     1    12345678999999999998873


Q ss_pred             HH---hccchhhccccc
Q psy3446          78 EI---RQLKLFLRLKTE   91 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~   91 (166)
                      ..   .+...++++|+.
T Consensus       131 ~~~~~~~~g~iv~iss~  147 (264)
T 3i4f_A          131 PVMRKQNFGRIINYGFQ  147 (264)
T ss_dssp             HHHHHHTCEEEEEECCT
T ss_pred             HHHHhcCCCeEEEEeec
Confidence            22   223456666654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=97.38  E-value=0.00038  Score=51.58  Aligned_cols=59  Identities=15%  Similarity=0.201  Sum_probs=41.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.++.      .++++++++|+|||+|+...+.  .+....+.+|+.|+.+++++|.+.
T Consensus        60 ~~~~~~~Dl~d~~------~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~  120 (338)
T 2rh8_A           60 DLKIFRADLTDEL------SFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRA  120 (338)
T ss_dssp             CEEEEECCTTTSS------SSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHC
T ss_pred             cEEEEecCCCChH------HHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHc
Confidence            4567788876542      3556677899999999876443  223347889999999999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.38  E-value=0.00064  Score=48.65  Aligned_cols=73  Identities=22%  Similarity=0.200  Sum_probs=49.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++.+++.+       .+|++||+|+....        ...+...+++|+.|+.++.+.+..
T Consensus        55 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  128 (261)
T 3n74_A           55 DAALAVAADISKE------ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP  128 (261)
T ss_dssp             TTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4689999999985      33444433       68999999997541        223455789999999988877654


Q ss_pred             Hhc-------cchhhcccccC
Q psy3446          79 IRQ-------LKLFLRLKTEV   92 (166)
Q Consensus        79 ~~~-------~~~~~~~ss~~   92 (166)
                      ...       ...++++||..
T Consensus       129 ~~~~~~~~~~~~~iv~isS~~  149 (261)
T 3n74_A          129 HFKENGAKGQECVILNVASTG  149 (261)
T ss_dssp             HHHHHHHTTCCEEEEEECCTT
T ss_pred             HHHhcCCCCCCeEEEEeCchh
Confidence            321       12366666643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.37  E-value=0.00054  Score=49.53  Aligned_cols=73  Identities=11%  Similarity=0.092  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc------hh---hHHHHHHhhhhcH----HHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------DE---KIQLAVAINVLGV----RAML   73 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~------~~---~~~~~~~~nv~gt----~~ll   73 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||....      ..   .+...+++|+.|+    +.++
T Consensus        83 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  156 (279)
T 3ctm_A           83 VHSKAYKCNISDP------KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG  156 (279)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CcceEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            3688999999984      33444433       48999999996533      21   2345788999995    4555


Q ss_pred             HHHHHHhccchhhcccccCc
Q psy3446          74 ELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        74 ~l~~~~~~~~~~~~~ss~~~   93 (166)
                      ..+++. +...++++||...
T Consensus       157 ~~~~~~-~~~~iv~isS~~~  175 (279)
T 3ctm_A          157 KIFKKN-GKGSLIITSSISG  175 (279)
T ss_dssp             HHHHHH-TCCEEEEECCCTT
T ss_pred             HHHHhc-CCCeEEEECchHh
Confidence            555442 3456778877654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.37  E-value=0.00066  Score=48.68  Aligned_cols=74  Identities=15%  Similarity=0.251  Sum_probs=47.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.        .++|+|||+||.....       ..+...+++|+.|+.++.+.+..
T Consensus        63 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  136 (266)
T 1xq1_A           63 FQVTGSVCDASLR------PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP  136 (266)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEECCCCCH------HHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3688999999984      3344443        5789999999975422       23455789999999999888743


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       137 ~~~~~~~~~iv~isS~~~  154 (266)
T 1xq1_A          137 LLKASGCGNIIFMSSIAG  154 (266)
T ss_dssp             HHHHHSSCEEEEEC----
T ss_pred             HHHhcCCcEEEEEccchh
Confidence            2   23456777777543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.36  E-value=0.00079  Score=47.84  Aligned_cols=73  Identities=16%  Similarity=0.218  Sum_probs=49.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  127 (246)
T 2uvd_A           54 SDAIAVRADVANA------EDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF  127 (246)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999985      33444433       689999999975421       234567899999988777655432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       128 ~~~~~~g~iv~isS~~  143 (246)
T 2uvd_A          128 MMRQRHGRIVNIASVV  143 (246)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHHcCCcEEEEECCHH
Confidence               2335677777753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.36  E-value=0.00083  Score=48.12  Aligned_cols=74  Identities=20%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.        .++|++||+||....       ...+...+++|+.|+.++.+.+..
T Consensus        58 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T 2ae2_A           58 FKVEASVCDLSSR------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP  131 (260)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3688999999985      3344443        469999999997532       123456789999999999888753


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       132 ~~~~~~~g~iv~isS~~~  149 (260)
T 2ae2_A          132 FLKASERGNVVFISSVSG  149 (260)
T ss_dssp             HHHHTSSEEEEEECCGGG
T ss_pred             HHHhcCCcEEEEEcchhh
Confidence            2   23356777777543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.36  E-value=0.00052  Score=49.32  Aligned_cols=74  Identities=11%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.+..+.+       ++|+|||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        71 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  144 (274)
T 1ja9_A           71 AQGVAIQADISKP------SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  144 (274)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999985      33444444       789999999975421       233567899999999999888764


Q ss_pred             hc-cchhhcccccCc
Q psy3446          80 RQ-LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~-~~~~~~~ss~~~   93 (166)
                      .. ...++++||...
T Consensus       145 ~~~~~~iv~~sS~~~  159 (274)
T 1ja9_A          145 CRRGGRIILTSSIAA  159 (274)
T ss_dssp             EEEEEEEEEECCGGG
T ss_pred             HhhCCEEEEEcChHh
Confidence            21 146777777544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.36  E-value=0.00077  Score=48.95  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=51.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ++..+.       .++|++||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        79 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  152 (283)
T 1g0o_A           79 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  152 (283)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            36889999999852      333332       368999999997643       2344568899999999999988764


Q ss_pred             h-ccchhhcccccC
Q psy3446          80 R-QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~-~~~~~~~~ss~~   92 (166)
                      . +...++++||..
T Consensus       153 ~~~~g~iv~isS~~  166 (283)
T 1g0o_A          153 LEIGGRLILMGSIT  166 (283)
T ss_dssp             SCTTCEEEEECCGG
T ss_pred             HhcCCeEEEEechh
Confidence            2 234567777654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.35  E-value=0.00066  Score=49.61  Aligned_cols=99  Identities=13%  Similarity=0.035  Sum_probs=61.2

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHH--HhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE--IRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~--~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      .|+-+||++++|.++...+.             ++  ...+..+.+-... .....++..+.+|+.      +...++++
T Consensus         4 ~vlVtGatG~iG~~l~~~L~-------------~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~D~~------d~~~~~~~   63 (312)
T 2yy7_A            4 KILIIGACGQIGTELTQKLR-------------KLYGTENVIASDIRKLN-TDVVNSGPFEVVNAL------DFNQIEHL   63 (312)
T ss_dssp             CEEEETTTSHHHHHHHHHHH-------------HHHCGGGEEEEESCCCS-CHHHHSSCEEECCTT------CHHHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHH-------------HhCCCCEEEEEcCCCcc-ccccCCCceEEecCC------CHHHHHHH
Confidence            37788888888877644321             11  1122222111110 001123456677864      34567777


Q ss_pred             hc--cccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         122 RT--NVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       122 ~~--~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++  ++|+|||+|+.....  .+....+.+|+.|+.+++++|++.
T Consensus        64 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  108 (312)
T 2yy7_A           64 VEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK  108 (312)
T ss_dssp             HHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc
Confidence            76  799999999975432  345678899999999999999874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.35  E-value=0.00073  Score=48.66  Aligned_cols=74  Identities=12%  Similarity=0.177  Sum_probs=52.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        46 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  119 (264)
T 2dtx_A           46 AKYDHIECDVTNP------DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY  119 (264)
T ss_dssp             CSSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       689999999975432       234568899999999988877653


Q ss_pred             h---ccchhhcccccCc
Q psy3446          80 R---QLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~---~~~~~~~~ss~~~   93 (166)
                      .   +...++++||...
T Consensus       120 ~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A          120 MIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             HTTSSSCEEEEECCGGG
T ss_pred             HHHcCCcEEEEECCchh
Confidence            2   2346777777543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.34  E-value=0.00076  Score=48.17  Aligned_cols=74  Identities=19%  Similarity=0.113  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        51 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  124 (255)
T 2q2v_A           51 VKAVHHPADLSDV------AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG  124 (255)
T ss_dssp             CCEEEECCCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999984      34555544       79999999997532       2234568899999888777655321


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       125 ~~~~~~g~iv~isS~~~  141 (255)
T 2q2v_A          125 MRARNWGRIINIASVHG  141 (255)
T ss_dssp             HHHTTCEEEEEECCGGG
T ss_pred             HHHcCCcEEEEEcCchh
Confidence               22356777777644

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.34  E-value=0.001  Score=48.83  Aligned_cols=100  Identities=12%  Similarity=0.090  Sum_probs=63.0

Q ss_pred             CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          41 NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      +-..|+-+||++++|..+...+.             +++..+..+.+.... .. . ++.++.+|+.      +...+++
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~-------------~~G~~V~~~~r~~~~-~~-l-~~~~~~~Dl~------d~~~~~~   68 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLT-------------EQNVEVFGTSRNNEA-KL-P-NVEMISLDIM------DSQRVKK   68 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEESCTTC-CC-T-TEEEEECCTT------CHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHH-------------HCCCEEEEEecCCcc-cc-c-eeeEEECCCC------CHHHHHH
Confidence            34678899999988877644321             111122222111111 00 0 4566778874      3456677


Q ss_pred             Hhcc--ccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         121 LRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       121 l~~~--~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++++  +|+|||+|+......   .....+.+|+.|+.+++++|.++
T Consensus        69 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  115 (321)
T 2pk3_A           69 VISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDS  115 (321)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHh
Confidence            7665  899999999765332   46678899999999999999775

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.34  E-value=0.00062  Score=49.82  Aligned_cols=72  Identities=7%  Similarity=0.092  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....       ...+...+++|+.|+.++++.+...
T Consensus        72 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  145 (303)
T 1yxm_A           72 ARVIPIQCNIRNE------EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS  145 (303)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccEEEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999984      33444443       58999999995432       1234557899999999999887552


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .....++++|+.
T Consensus       146 ~~~~~~~~iv~isS~  160 (303)
T 1yxm_A          146 WMKEHGGSIVNIIVP  160 (303)
T ss_dssp             THHHHCEEEEEECCC
T ss_pred             HHHhcCCeEEEEEee
Confidence               123446666654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.32  E-value=0.00079  Score=48.28  Aligned_cols=72  Identities=14%  Similarity=0.089  Sum_probs=50.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++      +.++.+.+       ++|+|||+||.....       ..+...+++|+.|+.++.+.+....
T Consensus        59 ~~~~~~~D~~d~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~  132 (263)
T 3ak4_A           59 GGFAVEVDVTKR------ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF  132 (263)
T ss_dssp             CCEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            678999999984      34554444       799999999975422       2345678999999999988765431


Q ss_pred             ---c-cchhhcccccC
Q psy3446          81 ---Q-LKLFLRLKTEV   92 (166)
Q Consensus        81 ---~-~~~~~~~ss~~   92 (166)
                         . ...++++||..
T Consensus       133 ~~~~~~g~iv~isS~~  148 (263)
T 3ak4_A          133 LASNTKGVIVNTASLA  148 (263)
T ss_dssp             HHTTCCCEEEEECCGG
T ss_pred             HhcCCCeEEEEecccc
Confidence               1 24566666644

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.32  E-value=0.00078  Score=48.02  Aligned_cols=72  Identities=14%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      +.++.+|++++      +.++.+.+       ++|++||+|+.....       ..+...+.+|+.|+.++.+.+...  
T Consensus        48 ~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~  121 (250)
T 2fwm_X           48 FATEVMDVADA------AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR  121 (250)
T ss_dssp             SEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ceEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence            78899999984      34444443       689999999975422       244668899999999998877332  


Q ss_pred             -hccchhhcccccCc
Q psy3446          80 -RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 -~~~~~~~~~ss~~~   93 (166)
                       .+...++++||...
T Consensus       122 ~~~~g~iv~isS~~~  136 (250)
T 2fwm_X          122 RQRGGAIVTVASDAA  136 (250)
T ss_dssp             HHTCCEEEEECCGGG
T ss_pred             hcCCCEEEEECchhh
Confidence             22346777776543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.31  E-value=0.00062  Score=51.41  Aligned_cols=100  Identities=9%  Similarity=-0.001  Sum_probs=64.2

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH-hccchhhcccccCc-c--ceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI-RQLKLFLRLKTEVP-H--FLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~-~~~~~~~~~ss~~~-~--~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      .|+-+||++++|..+...+.             ++. ..+..+.+...... .  ...++.++.+|+.      +...++
T Consensus        34 ~ilVtGatG~iG~~l~~~L~-------------~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~------d~~~l~   94 (377)
T 2q1s_A           34 NVMVVGGAGFVGSNLVKRLL-------------ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSIT------DDALLA   94 (377)
T ss_dssp             EEEEETTTSHHHHHHHHHHH-------------HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTT------CHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHH-------------HcCCceEEEEECCCCCchhhccCCCceEEEECCCC------CHHHHH
Confidence            58889999988877644322             111 11222221111100 0  0235667788874      345677


Q ss_pred             HHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++++++|+|||+|+.....   .+....+.+|+.|+.+++++|++.
T Consensus        95 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~  140 (377)
T 2q1s_A           95 SLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHF  140 (377)
T ss_dssp             HCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTC
T ss_pred             HHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            7888999999999976543   345678899999999999999765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.31  E-value=0.00088  Score=48.47  Aligned_cols=74  Identities=15%  Similarity=0.118  Sum_probs=48.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhc----HHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLG----VRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~g----t~~ll~l   75 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||....       ...+...+++|+.|    ++.++..
T Consensus        83 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~  156 (279)
T 1xg5_A           83 GTLIPYRCDLSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS  156 (279)
T ss_dssp             SEEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3588999999985      33444433       78999999997532       22345688999999    5555555


Q ss_pred             HHHHhc-cchhhcccccCc
Q psy3446          76 AREIRQ-LKLFLRLKTEVP   93 (166)
Q Consensus        76 ~~~~~~-~~~~~~~ss~~~   93 (166)
                      +++... ...++++||...
T Consensus       157 ~~~~~~~~g~iv~isS~~~  175 (279)
T 1xg5_A          157 MKERNVDDGHIININSMSG  175 (279)
T ss_dssp             HHHTTCCSCEEEEECCGGG
T ss_pred             HHhcCCCCceEEEEcChhh
Confidence            554221 146777777644

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.31  E-value=0.00048  Score=48.63  Aligned_cols=64  Identities=8%  Similarity=0.087  Sum_probs=46.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+...+.           .+++++++.+++ .+..+++++||...
T Consensus        67 ~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~-~~~~~iV~iSS~~~  128 (236)
T 3qvo_A           67 TNSQIIMGDVLNH------AALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKA-CDVKRLIFVLSLGI  128 (236)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHH-TTCCEEEEECCCCC
T ss_pred             CCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHH-cCCCEEEEEeccee
Confidence            4789999999984      56788889999999999853211           235678888876 34567899998776


Q ss_pred             cc
Q psy3446          94 HF   95 (166)
Q Consensus        94 ~~   95 (166)
                      +.
T Consensus       129 ~~  130 (236)
T 3qvo_A          129 YD  130 (236)
T ss_dssp             --
T ss_pred             cC
Confidence            53

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.31  E-value=0.00023  Score=54.70  Aligned_cols=57  Identities=23%  Similarity=0.313  Sum_probs=40.6

Q ss_pred             eeeEeecCCCCC-CCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          97 EKISAVAGDVSL-PGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        97 ~~~~~v~gD~~~-~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .++.++.+|+.+ +.++        ...++|+|||+|+...+..++...+.+|+.|+.+++++|.+
T Consensus       130 ~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~  187 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  187 (427)
T ss_dssp             TTEEEEEECC---CCCC--------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeCCCCCcccCC--------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            467788899876 3333        45789999999998877778888999999999999999987

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.31  E-value=0.00058  Score=49.52  Aligned_cols=74  Identities=12%  Similarity=0.058  Sum_probs=52.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-----hhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-----EKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-----~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....     ..+...+++|+.|+.++.+.+.... 
T Consensus        71 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  144 (287)
T 3pxx_A           71 RKAYTAEVDVRDR------AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT  144 (287)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence            4789999999985      33444433       789999999986532     3456689999999999998876542 


Q ss_pred             ccchhhcccccCc
Q psy3446          81 QLKLFLRLKTEVP   93 (166)
Q Consensus        81 ~~~~~~~~ss~~~   93 (166)
                      +...++++||...
T Consensus       145 ~~g~iv~isS~~~  157 (287)
T 3pxx_A          145 SGASIITTGSVAG  157 (287)
T ss_dssp             TTCEEEEECCHHH
T ss_pred             cCcEEEEeccchh
Confidence            2235667776543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.30  E-value=0.0003  Score=55.29  Aligned_cols=71  Identities=31%  Similarity=0.397  Sum_probs=52.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC------ccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN------VNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~------~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++      +.+..+.++      +|.|||+|+....+       ..+...+.+|+.|+.++.++++. .
T Consensus       279 ~~v~~~~~Dv~d~------~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~  351 (486)
T 2fr1_A          279 ARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE-L  351 (486)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-S
T ss_pred             CEEEEEEeCCCCH------HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc-C
Confidence            3689999999984      446666554      49999999975421       23355778899999999998876 3


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      ....|+++||.
T Consensus       352 ~~~~~V~~SS~  362 (486)
T 2fr1_A          352 DLTAFVLFSSF  362 (486)
T ss_dssp             CCSEEEEEEEH
T ss_pred             CCCEEEEEcCh
Confidence            45667777774

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.30  E-value=0.00036  Score=50.91  Aligned_cols=67  Identities=18%  Similarity=0.078  Sum_probs=49.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+.....     ....|+.++.++++.+++. +.+.+++.|+..
T Consensus        51 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~  117 (299)
T 2wm3_A           51 QGAEVVQGDQDDQ------VIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLEN  117 (299)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCC
T ss_pred             CCCEEEEecCCCH------HHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCcc
Confidence            3689999999984      55778888999999999753211     1345788999999999874 556777776643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.00085  Score=47.98  Aligned_cols=60  Identities=23%  Similarity=0.266  Sum_probs=44.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++.++.+|++++      ++.+.+.+       .+|++||+||....           ...+...+++|+.|+.++.+.
T Consensus        53 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  126 (257)
T 3tpc_A           53 AAVRFRNADVTNE------ADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL  126 (257)
T ss_dssp             --CEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3688999999985      33444443       78999999997531           234566889999999999988


Q ss_pred             HHHH
Q psy3446          76 AREI   79 (166)
Q Consensus        76 ~~~~   79 (166)
                      +...
T Consensus       127 ~~~~  130 (257)
T 3tpc_A          127 AAEV  130 (257)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.30  E-value=0.0011  Score=48.08  Aligned_cols=74  Identities=9%  Similarity=0.106  Sum_probs=51.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        71 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  144 (281)
T 3s55_A           71 RRCISAKVDVKDR------AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG  144 (281)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999995      33444433       78999999997542       2334567899999999998876432


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       145 ~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A          145 MIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCEEEEECChhh
Confidence               22345777777543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.29  E-value=0.00093  Score=49.71  Aligned_cols=73  Identities=18%  Similarity=0.138  Sum_probs=51.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC-----ccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN-----VNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~-----~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      .++.++.+|++++      +.++.+.++     +|++||+|+.....       ..+...+++|+.|+.++.+.+...  
T Consensus        57 ~~~~~~~~Dv~d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  130 (327)
T 1jtv_A           57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK  130 (327)
T ss_dssp             TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            4689999999984      446666554     89999999975321       234568899999999998876332  


Q ss_pred             -hccchhhcccccC
Q psy3446          80 -RQLKLFLRLKTEV   92 (166)
Q Consensus        80 -~~~~~~~~~ss~~   92 (166)
                       .+...++++||..
T Consensus       131 ~~~~g~IV~isS~~  144 (327)
T 1jtv_A          131 RRGSGRVLVTGSVG  144 (327)
T ss_dssp             HHTCEEEEEEEEGG
T ss_pred             hcCCCEEEEECCcc
Confidence             2345677777754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.29  E-value=0.00099  Score=48.10  Aligned_cols=73  Identities=23%  Similarity=0.253  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        78 ~~~~~~~~D~~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  151 (269)
T 4dmm_A           78 GEAFAVKADVSQE------SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKI  151 (269)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999995      33444433       789999999976422       334568899999999998876442


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       152 ~~~~~~g~iv~isS~~  167 (269)
T 4dmm_A          152 MLKQRSGRIINIASVV  167 (269)
T ss_dssp             HHHHTCCEEEEECCHH
T ss_pred             HHHcCCcEEEEECchh
Confidence               1234567777643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.29  E-value=0.00096  Score=47.79  Aligned_cols=74  Identities=15%  Similarity=0.095  Sum_probs=51.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....       ...+...+.+|+.|+.++.+.+...
T Consensus        55 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  128 (260)
T 1x1t_A           55 VKVLYDGADLSKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH  128 (260)
T ss_dssp             SCEEEECCCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3688999999985      33444433       68999999997542       1234568899999999988876542


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       129 ~~~~~~g~iv~isS~~~  145 (260)
T 1x1t_A          129 MKKQGFGRIINIASAHG  145 (260)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHhcCCCEEEEECcHHh
Confidence               12356777777543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.29  E-value=0.00088  Score=47.96  Aligned_cols=74  Identities=15%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++      +..+.+.+       .+|++||+||....      ...+...+++|+.|+.++.+.+... 
T Consensus        61 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  134 (256)
T 3gaf_A           61 GKAIGLECNVTDE------QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHM  134 (256)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4789999999985      33444433       78999999997543      1234567899999999999877542 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       135 ~~~~~g~iv~isS~~~  150 (256)
T 3gaf_A          135 QKAGGGAILNISSMAG  150 (256)
T ss_dssp             HHTTCEEEEEECCGGG
T ss_pred             HhcCCcEEEEEcCHHH
Confidence              12345677777543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.29  E-value=0.00036  Score=52.20  Aligned_cols=57  Identities=21%  Similarity=0.124  Sum_probs=44.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc---ccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN---VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~---~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      +...+.+++++   +|+|||+|+...  .+....+.+|+.|+.+++++|++.
T Consensus        49 ~~~~~~~Dl~------d~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~  108 (364)
T 2v6g_A           49 PINYVQCDIS------DPDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPN  108 (364)
T ss_dssp             CCEEEECCTT------SHHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ceEEEEeecC------CHHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHh
Confidence            5566778864      34567777777   999999999653  346678899999999999999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.29  E-value=0.0012  Score=46.62  Aligned_cols=73  Identities=14%  Similarity=0.125  Sum_probs=51.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---c
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---Q   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---~   81 (166)
                      +++++.+|++++      +.++.+.+   .+|+|||+||.....       ..+...+++|+.|+.++.+.+....   +
T Consensus        53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~  126 (244)
T 3d3w_A           53 GIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG  126 (244)
T ss_dssp             TCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            567889999984      44566654   589999999975421       2345688999999999888776531   2


Q ss_pred             -cchhhcccccCc
Q psy3446          82 -LKLFLRLKTEVP   93 (166)
Q Consensus        82 -~~~~~~~ss~~~   93 (166)
                       ...++++||...
T Consensus       127 ~~~~iv~~sS~~~  139 (244)
T 3d3w_A          127 VPGAIVNVSSQCS  139 (244)
T ss_dssp             CCEEEEEECCGGG
T ss_pred             CCcEEEEeCchhh
Confidence             345777777543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.28  E-value=0.00096  Score=47.08  Aligned_cols=72  Identities=14%  Similarity=0.172  Sum_probs=47.1

Q ss_pred             ceEE-EecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISA-VAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~-~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.+ +.+|++++      +.++.+.       .++|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        52 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~  125 (245)
T 2ph3_A           52 PLVAVLGANLLEA------EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL  125 (245)
T ss_dssp             SCEEEEECCTTSH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEEeccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            4666 99999984      3344432       378999999997542       2234567899999976666544321


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       126 ~~~~~~~~iv~~sS~~  141 (245)
T 2ph3_A          126 MMKARFGRIVNITSVV  141 (245)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHhcCCCEEEEEeChh
Confidence               2345677777753

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.28  E-value=0.00061  Score=48.71  Aligned_cols=74  Identities=16%  Similarity=0.086  Sum_probs=51.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        64 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  137 (265)
T 1h5q_A           64 VKTKAYQCDVSNT------DIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL  137 (265)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeeEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence            4688999999985      33443332       489999999975422       234557899999999999877653


Q ss_pred             h---c-cchhhcccccCc
Q psy3446          80 R---Q-LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~---~-~~~~~~~ss~~~   93 (166)
                      .   + ...++++||...
T Consensus       138 ~~~~~~~~~iv~~sS~~~  155 (265)
T 1h5q_A          138 WLQKQQKGSIVVTSSMSS  155 (265)
T ss_dssp             HHHHTCCEEEEEECCGGG
T ss_pred             HHhcCCCceEEEeCCchh
Confidence            1   1 256778887654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.28  E-value=0.0011  Score=47.18  Aligned_cols=73  Identities=14%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||...    +    ...+...+++|+.|+.++.+.+..
T Consensus        46 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  119 (248)
T 3asu_A           46 DNLYIAQLDVRNR------AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3688999999984      44555544       5899999999652    1    123456889999999988887653


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...++++||..
T Consensus       120 ~m~~~~~g~iv~isS~~  136 (248)
T 3asu_A          120 GMVERNHGHIINIGSTA  136 (248)
T ss_dssp             HHHHHTCCEEEEECCGG
T ss_pred             HHHhcCCceEEEEccch
Confidence            2   2234677777754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.27  E-value=0.0011  Score=47.42  Aligned_cols=73  Identities=22%  Similarity=0.076  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        51 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  124 (256)
T 1geg_A           51 GHAVAVKVDVSDR------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA  124 (256)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999984      33444443       79999999996532       1234567899999999888776543


Q ss_pred             h---c-cchhhcccccC
Q psy3446          80 R---Q-LKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~-~~~~~~~ss~~   92 (166)
                      .   + ...++++||..
T Consensus       125 ~~~~~~~g~iv~isS~~  141 (256)
T 1geg_A          125 FKKEGHGGKIINACSQA  141 (256)
T ss_dssp             HHHHTSCEEEEEECCGG
T ss_pred             HHhcCCCCEEEEECchh
Confidence            1   1 34566776654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.27  E-value=0.00074  Score=48.95  Aligned_cols=73  Identities=18%  Similarity=0.100  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|+|||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        71 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  144 (277)
T 2rhc_B           71 VEADGRTCDVRSV------PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA  144 (277)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence            3688999999985      33444433       689999999975321       234567899999999988876542


Q ss_pred             -----hccchhhcccccC
Q psy3446          80 -----RQLKLFLRLKTEV   92 (166)
Q Consensus        80 -----~~~~~~~~~ss~~   92 (166)
                           .+...++++||..
T Consensus       145 ~~m~~~~~g~iv~isS~~  162 (277)
T 2rhc_B          145 GGMLERGTGRIVNIASTG  162 (277)
T ss_dssp             TCHHHHTEEEEEEECCGG
T ss_pred             hhHhhcCCeEEEEECccc
Confidence                 1234567777654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=97.26  E-value=0.00064  Score=50.38  Aligned_cols=60  Identities=12%  Similarity=0.225  Sum_probs=44.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++.++.+|+.++.      .++++++++|+|||+|+...+.  .+....+.+|+.|+.++++.|.+..
T Consensus        57 ~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  118 (337)
T 2c29_D           57 HLTLWKADLADEG------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK  118 (337)
T ss_dssp             HEEEEECCTTSTT------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEEcCCCCHH------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567788976542      3566777899999999865432  2344578899999999999998753

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.26  E-value=0.00097  Score=47.28  Aligned_cols=74  Identities=16%  Similarity=0.081  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.+..+.+       .+|+|||+||....       ...+...+++|+.|+..+.+.+...
T Consensus        54 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  127 (251)
T 1zk4_A           54 DQIQFFQHDSSDE------DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR  127 (251)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            4789999999984      33444433       58999999997532       1234567899999998877765432


Q ss_pred             h---cc-chhhcccccCc
Q psy3446          80 R---QL-KLFLRLKTEVP   93 (166)
Q Consensus        80 ~---~~-~~~~~~ss~~~   93 (166)
                      .   +. ..++++||...
T Consensus       128 ~~~~~~~~~iv~isS~~~  145 (251)
T 1zk4_A          128 MKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             HTTSSSCEEEEEECCGGG
T ss_pred             HHhcCCCCEEEEeCCchh
Confidence            2   22 45777777543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.26  E-value=0.00096  Score=47.71  Aligned_cols=60  Identities=22%  Similarity=0.202  Sum_probs=44.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|++++      ++.+.+.+      .+|++||+|+....           ...+...+++|+.|+.++.+.+
T Consensus        52 ~~~~~~~~D~~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  125 (257)
T 3tl3_A           52 DRARFAAADVTDE------AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLA  125 (257)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHH
Confidence            4789999999985      33444443      79999999997532           1234568899999999999887


Q ss_pred             HHH
Q psy3446          77 REI   79 (166)
Q Consensus        77 ~~~   79 (166)
                      ...
T Consensus       126 ~~~  128 (257)
T 3tl3_A          126 AER  128 (257)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.26  E-value=0.0012  Score=48.95  Aligned_cols=61  Identities=31%  Similarity=0.359  Sum_probs=45.3

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHh-ccccEEEEccccccc--hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLR-TNVNVIFHGAATVRF--DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~-~~~d~i~h~aa~~~~--~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++.++.+|+.++      ..+++++ .++|+|||+|+....  ..+....+.+|+.|+.+++++|.+..
T Consensus        64 ~~~~~~~~Dl~d~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~  127 (342)
T 2hrz_A           64 GAVDARAADLSAP------GEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIAN  127 (342)
T ss_dssp             SEEEEEECCTTST------THHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceeEEEcCCCCH------HHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3566778887543      3456666 489999999996542  23456678999999999999998753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.26  E-value=0.00094  Score=48.39  Aligned_cols=73  Identities=14%  Similarity=0.136  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        77 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  150 (280)
T 3pgx_A           77 RKALTRVLDVRDD------AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPA  150 (280)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999976422       234557889999999998876543


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++||..
T Consensus       151 ~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A          151 MIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             HHHHCSCEEEEEECCGG
T ss_pred             HHhcCCCCEEEEEcchh
Confidence            1    134577777654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.26  E-value=0.001  Score=47.38  Aligned_cols=74  Identities=12%  Similarity=0.119  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       .++|++||+||....+       ..+...+++|+.|+.++.+.+...
T Consensus        56 ~~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  129 (247)
T 2jah_A           56 AKVHVLELDVADR------QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH  129 (247)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999985      3344333       3789999999975321       234567899999999998876543


Q ss_pred             hc--cchhhcccccCc
Q psy3446          80 RQ--LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~--~~~~~~~ss~~~   93 (166)
                      ..  ...++++||...
T Consensus       130 ~~~~~g~iv~isS~~~  145 (247)
T 2jah_A          130 LLRSKGTVVQMSSIAG  145 (247)
T ss_dssp             HHHHTCEEEEECCGGG
T ss_pred             HHHCCCEEEEEccHHh
Confidence            21  146777777543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.25  E-value=0.0015  Score=48.29  Aligned_cols=60  Identities=22%  Similarity=0.094  Sum_probs=45.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++..+.+|+.      +...++++++  ++|+|+|+|+......   .....+..|+.|+.++++.|++.+
T Consensus        56 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  120 (341)
T 3enk_A           56 TPAFHETDVS------DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA  120 (341)
T ss_dssp             CCEEECCCTT------CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEeecC------CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC
Confidence            5567778874      3456777776  7999999999765332   344678899999999999998753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.25  E-value=0.00075  Score=49.30  Aligned_cols=73  Identities=18%  Similarity=0.113  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||....       ...+...+.+|+.|+.++.+.+...
T Consensus        76 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  149 (302)
T 1w6u_A           76 NKVHAIQCDVRDP------DMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ  149 (302)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999984      33444433       56999999996432       2234567899999999998876543


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++||.+
T Consensus       150 ~~~~~~~~~iv~isS~~  166 (302)
T 1w6u_A          150 LIKAQKGAAFLSITTIY  166 (302)
T ss_dssp             HHHTTCCEEEEEECCTH
T ss_pred             HHHhcCCCEEEEEcccc
Confidence            2    234677777653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.25  E-value=0.00099  Score=48.33  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||.....       ..++..+++|+.|+.++.+.+...
T Consensus        81 ~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  154 (276)
T 3r1i_A           81 GKALPIRCDVTQP------DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA  154 (276)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3688999999985      34444443       789999999976432       234557889999999998876543


Q ss_pred             hc----cchhhcccccC
Q psy3446          80 RQ----LKLFLRLKTEV   92 (166)
Q Consensus        80 ~~----~~~~~~~ss~~   92 (166)
                      ..    ...++++||..
T Consensus       155 m~~~~~~g~iv~isS~~  171 (276)
T 3r1i_A          155 MVDQGLGGTIITTASMS  171 (276)
T ss_dssp             HHHHTSCEEEEEECCGG
T ss_pred             HHHcCCCcEEEEECchH
Confidence            21    13466666644

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.24  E-value=0.00083  Score=50.10  Aligned_cols=60  Identities=23%  Similarity=0.223  Sum_probs=46.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.+      ...++++++++|+|||+|+.....   ......+.+|+.|+.+++++|.+.
T Consensus        81 ~~~~~~~~Dl~d------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  143 (352)
T 1sb8_A           81 SNFKFIQGDIRN------LDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA  143 (352)
T ss_dssp             TTEEEEECCTTS------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CceEEEECCCCC------HHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            356677888743      456778888999999999975432   345668899999999999999875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.24  E-value=0.0013  Score=46.83  Aligned_cols=74  Identities=19%  Similarity=0.153  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  127 (249)
T 2ew8_A           54 RRVLTVKCDVSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG  127 (249)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      3344432       4789999999975321       234567899999988887764332


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       128 ~~~~~~g~iv~isS~~~  144 (249)
T 2ew8_A          128 MKRNGWGRIINLTSTTY  144 (249)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHHcCCeEEEEEcchhh
Confidence               22356777777543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.24  E-value=0.0012  Score=47.68  Aligned_cols=73  Identities=11%  Similarity=0.028  Sum_probs=51.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc---------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~---------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++      +..+.+.+       .+|++||+|+....         ...+...+++|+.|+.++.+.+.
T Consensus        57 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  130 (271)
T 3tzq_B           57 RGAVHHVVDLTNE------VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI  130 (271)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            4688999999985      34444444       78999999997622         12335678999999999998874


Q ss_pred             HH---hccchhhcccccC
Q psy3446          78 EI---RQLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~~   92 (166)
                      ..   .+...++++||..
T Consensus       131 ~~m~~~~~g~iv~isS~~  148 (271)
T 3tzq_B          131 PRLISAGGGAIVNISSAT  148 (271)
T ss_dssp             HHHHHTTCEEEEEECCGG
T ss_pred             HHHHhcCCCEEEEECCHH
Confidence            32   2334667777654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.24  E-value=0.00076  Score=47.51  Aligned_cols=101  Identities=16%  Similarity=0.015  Sum_probs=63.3

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh--ccchhhcccccCc-cceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR--QLKLFLRLKTEVP-HFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~--~~~~~~~~ss~~~-~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      -.|+-+||.+++|..+...+             ++++.  .+..+.+-..... ....++..+.+|+.++      ..++
T Consensus        19 ~~vlVtGasg~iG~~l~~~L-------------~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------~~~~   79 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEI-------------LEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL------DDYA   79 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHH-------------HHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG------GGGG
T ss_pred             CeEEEECCCcHHHHHHHHHH-------------HcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCH------HHHH
Confidence            36888999888887764322             22222  2211111111000 0113456677887543      3456


Q ss_pred             HHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++++++|+|||+|+...........+.+|+.|+.++++.+++.
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  122 (242)
T 2bka_A           80 SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG  122 (242)
T ss_dssp             GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             HHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC
Confidence            6777899999999976555556778899999999999998775

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.23  E-value=0.00095  Score=47.43  Aligned_cols=73  Identities=14%  Similarity=0.100  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEccee-ecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAAT-VRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~-~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       ++|+|||+||. ...       ...+...+++|+.|+.++.+.+..
T Consensus        57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (258)
T 3afn_B           57 GDAAFFAADLATS------EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP  130 (258)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            3688999999984      34555544       79999999996 321       122455789999999998886643


Q ss_pred             Hh---c--c---chhhcccccC
Q psy3446          79 IR---Q--L---KLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~--~---~~~~~~ss~~   92 (166)
                      ..   .  .   ..++++||..
T Consensus       131 ~~~~~~~~~~~~~~iv~~sS~~  152 (258)
T 3afn_B          131 HLAAAAKASGQTSAVISTGSIA  152 (258)
T ss_dssp             HHHHHHHHHTSCEEEEEECCTH
T ss_pred             HHHhcccCCCCCcEEEEecchh
Confidence            21   1  1   4566666654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.0012  Score=47.98  Aligned_cols=73  Identities=10%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        76 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  149 (281)
T 3v2h_A           76 GTVLHHPADMTKP------SEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP  149 (281)
T ss_dssp             SCEEEECCCTTCH------HHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999985      33444433       789999999975422       234567899999999998876432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       150 ~~~~~~g~iv~isS~~  165 (281)
T 3v2h_A          150 MKKKGWGRIINIASAH  165 (281)
T ss_dssp             HHHHTCEEEEEECCGG
T ss_pred             HHHcCCCEEEEECCcc
Confidence               2234567777654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.23  E-value=0.0014  Score=47.62  Aligned_cols=74  Identities=19%  Similarity=0.136  Sum_probs=51.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  146 (277)
T 4dqx_A           73 SKAFGVRVDVSSA------KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPV  146 (277)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999975321       234567889999999988877543


Q ss_pred             h---ccchhhcccccCc
Q psy3446          80 R---QLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~---~~~~~~~~ss~~~   93 (166)
                      .   +...++++||...
T Consensus       147 ~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          147 MRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             HTTTTCEEEEEECCGGG
T ss_pred             HHHcCCcEEEEECchhh
Confidence            2   2235667766543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.23  E-value=0.0011  Score=48.44  Aligned_cols=74  Identities=14%  Similarity=0.163  Sum_probs=51.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      +++.+.+       .+|++||+||...    +    ...+...+++|+.|+.++.+.+..
T Consensus        87 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  160 (287)
T 3rku_A           87 AKVHVAQLDITQAE------KIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP  160 (287)
T ss_dssp             CEEEEEECCTTCGG------GHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999964      3555443       5899999999653    1    233466889999999999887743


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       161 ~m~~~~~g~IV~isS~~~  178 (287)
T 3rku_A          161 IFQAKNSGDIVNLGSIAG  178 (287)
T ss_dssp             HHHHHTCCEEEEECCGGG
T ss_pred             HHHhcCCCeEEEECChhh
Confidence            2   23345677776543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.23  E-value=0.0012  Score=47.95  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       .++|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        93 ~~~~~~~~Dl~d~------~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (285)
T 2c07_A           93 YESSGYAGDVSKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR  166 (285)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CceeEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3688999999985      3344443       368999999997642       1234567899999988887776532


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       167 ~~~~~~~~iv~isS~~  182 (285)
T 2c07_A          167 MINNRYGRIINISSIV  182 (285)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHhCCCCEEEEECChh
Confidence               2335677777753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.22  E-value=0.00043  Score=50.85  Aligned_cols=59  Identities=19%  Similarity=0.176  Sum_probs=42.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchH--HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE--KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~--~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ...++++++++|+|||+|+...+..  +...++.+|+.|+.++++.|.+.
T Consensus        54 ~~~~~~~Dl~d------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~  114 (322)
T 2p4h_X           54 KLHFFNADLSN------PDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS  114 (322)
T ss_dssp             HEEECCCCTTC------GGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEecCCCC------HHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence            45667788754      3456777888999999998654322  23447889999999999999765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.22  E-value=0.0014  Score=46.94  Aligned_cols=73  Identities=16%  Similarity=0.152  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  146 (266)
T 3o38_A           73 GRVEAVVCDVTST------EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY  146 (266)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCCH------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4799999999985      33444433       68999999997542       1234567899999999999887654


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++||..
T Consensus       147 ~~~~~~~~~iv~~sS~~  163 (266)
T 3o38_A          147 FRGVDHGGVIVNNASVL  163 (266)
T ss_dssp             HHTSSCCEEEEEECCGG
T ss_pred             HHhcCCCeEEEEeCCHH
Confidence            2    223466666643

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.22  E-value=0.0017  Score=46.51  Aligned_cols=73  Identities=12%  Similarity=0.064  Sum_probs=50.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        55 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~  128 (257)
T 3imf_A           55 GQILTVQMDVRNT------DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY  128 (257)
T ss_dssp             TCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999995      33444433       68999999996432       1234567899999999998876432


Q ss_pred             ----hccchhhcccccC
Q psy3446          80 ----RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ----~~~~~~~~~ss~~   92 (166)
                          .....++++||..
T Consensus       129 ~~~~~~~g~iv~isS~~  145 (257)
T 3imf_A          129 WIEKGIKGNIINMVATY  145 (257)
T ss_dssp             HHHHTCCCEEEEECCGG
T ss_pred             HHhhCCCcEEEEECchh
Confidence                1234566776643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.0014  Score=47.68  Aligned_cols=73  Identities=15%  Similarity=0.094  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        77 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  150 (283)
T 3v8b_A           77 GQAIALEADVSDE------LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVP  150 (283)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4688999999985      33444333       68999999997432        123456789999999999887743


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...++++||..
T Consensus       151 ~m~~~~~g~Iv~isS~~  167 (283)
T 3v8b_A          151 YLKQRGGGAIVVVSSIN  167 (283)
T ss_dssp             HHHHHTCEEEEEECCSB
T ss_pred             HHHHcCCceEEEEcChh
Confidence            2   2234567777643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.21  E-value=0.00088  Score=49.58  Aligned_cols=98  Identities=14%  Similarity=0.046  Sum_probs=61.1

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc---cceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP---HFLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~---~~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      .|+-+||++++|..+...+..             ++..+..+.+......   ....++.++.+|+.      +...+++
T Consensus        22 ~vlVTGasG~iG~~l~~~L~~-------------~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~------d~~~~~~   82 (330)
T 2pzm_A           22 RILITGGAGCLGSNLIEHWLP-------------QGHEILVIDNFATGKREVLPPVAGLSVIEGSVT------DAGLLER   82 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHGG-------------GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTT------CHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHH-------------CCCEEEEEECCCccchhhhhccCCceEEEeeCC------CHHHHHH
Confidence            588899999888876443321             1112222222111100   01135667778874      3456777


Q ss_pred             Hhc--cccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         121 LRT--NVNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       121 l~~--~~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++  ++|+|||+|+.....  ....  +.+|+.|+.+++++|.+.
T Consensus        83 ~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~  126 (330)
T 2pzm_A           83 AFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA  126 (330)
T ss_dssp             HHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH
T ss_pred             HHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc
Confidence            777  899999999976541  2233  889999999999999865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.21  E-value=0.0011  Score=48.06  Aligned_cols=73  Identities=14%  Similarity=0.226  Sum_probs=50.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-----------hhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-----------EKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-----------~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||.....           ..+...+++|+.|+.++.+.+
T Consensus        59 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  132 (280)
T 1xkq_A           59 QVNSVVADVTTE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV  132 (280)
T ss_dssp             GEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            689999999985      33444433       689999999975321           234567899999999998877


Q ss_pred             HHHh--ccchhhcccccCc
Q psy3446          77 REIR--QLKLFLRLKTEVP   93 (166)
Q Consensus        77 ~~~~--~~~~~~~~ss~~~   93 (166)
                      ....  ....++++||...
T Consensus       133 ~~~~~~~~g~iv~isS~~~  151 (280)
T 1xkq_A          133 KPHLVASKGEIVNVSSIVA  151 (280)
T ss_dssp             HHHHHHHTCEEEEECCGGG
T ss_pred             HHHhhcCCCcEEEecCccc
Confidence            6532  1145677777543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.20  E-value=0.0013  Score=47.38  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.+       .+|+|||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        76 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  149 (272)
T 4e3z_A           76 GEAVAIPGDVGNA------ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR  149 (272)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            4689999999985      33444433       68999999997643        123456789999999999887765


Q ss_pred             Hhc------cchhhcccccC
Q psy3446          79 IRQ------LKLFLRLKTEV   92 (166)
Q Consensus        79 ~~~------~~~~~~~ss~~   92 (166)
                      ...      ...++++||..
T Consensus       150 ~~~~~~~~~~g~iv~isS~~  169 (272)
T 4e3z_A          150 RMSRLYSGQGGAIVNVSSMA  169 (272)
T ss_dssp             HHCGGGTCCCEEEEEECCTH
T ss_pred             HHHHhccCCCCEEEEEcchH
Confidence            321      23466666643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.20  E-value=0.0014  Score=47.44  Aligned_cols=74  Identities=20%  Similarity=0.128  Sum_probs=51.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        74 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  147 (272)
T 4dyv_A           74 DDALCVPTDVTDP------DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR  147 (272)
T ss_dssp             SCCEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4789999999985      33444443       79999999997532        123356889999999988887654


Q ss_pred             Hhc-----cchhhcccccCc
Q psy3446          79 IRQ-----LKLFLRLKTEVP   93 (166)
Q Consensus        79 ~~~-----~~~~~~~ss~~~   93 (166)
                      ...     ...++++||...
T Consensus       148 ~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A          148 VMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             HHHHSSSCCEEEEEECCSST
T ss_pred             HHHhCCCCCcEEEEECchhh
Confidence            321     235677776543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.20  E-value=0.00089  Score=49.63  Aligned_cols=72  Identities=13%  Similarity=0.096  Sum_probs=50.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++      +.+..+.+       .+|+|||+||....+       ..+...+.+|+.|+.++++.+....
T Consensus        60 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  133 (319)
T 3ioy_A           60 EVMGVQLDVASR------EGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRM  133 (319)
T ss_dssp             GEEEEECCTTCH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            789999999985      33444433       679999999975322       2345688999999999998776532


Q ss_pred             c---------cchhhcccccC
Q psy3446          81 Q---------LKLFLRLKTEV   92 (166)
Q Consensus        81 ~---------~~~~~~~ss~~   92 (166)
                      .         ...++++||..
T Consensus       134 ~~~~~~~~~~~g~iV~isS~a  154 (319)
T 3ioy_A          134 VERVKAGEQKGGHVVNTASMA  154 (319)
T ss_dssp             HHHHHTTSCCCCEEEEECCGG
T ss_pred             HHhhhccCCCCcEEEEecccc
Confidence            1         22466776643

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.20  E-value=0.00041  Score=51.31  Aligned_cols=58  Identities=19%  Similarity=0.191  Sum_probs=43.7

Q ss_pred             eeEee-cCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAV-AGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v-~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+ .+|+.++.      .++++++++|+|||+|+...........+.+|+.|+.+++++|.+
T Consensus        62 ~~~~~~~~D~~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~  120 (342)
T 1y1p_A           62 RFETAVVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAA  120 (342)
T ss_dssp             TEEEEECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCcChH------HHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            44556 68876542      234455689999999997665556677889999999999999974

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.20  E-value=0.0015  Score=45.88  Aligned_cols=73  Identities=15%  Similarity=0.091  Sum_probs=49.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++      +.++.+.       .++|+|||+||....       ...+...+++|+.|+.++.+.+... 
T Consensus        51 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~  124 (234)
T 2ehd_A           51 GALPLPGDVREE------GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL  124 (234)
T ss_dssp             TCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            688999999984      3344333       368999999997542       1234567899999998777654332 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       125 ~~~~~~~iv~isS~~~  140 (234)
T 2ehd_A          125 LRRGGGTIVNVGSLAG  140 (234)
T ss_dssp             HTTTCEEEEEECCTTT
T ss_pred             HhCCCcEEEEECCchh
Confidence              22456777777654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.20  E-value=0.0012  Score=47.66  Aligned_cols=73  Identities=14%  Similarity=0.154  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        71 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  144 (267)
T 1vl8_A           71 VETMAFRCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL  144 (267)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3688899999985      33444433       689999999975422       234567889999999998876543


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       145 m~~~~~g~iv~isS~~  160 (267)
T 1vl8_A          145 LRESDNPSIINIGSLT  160 (267)
T ss_dssp             HTTCSSCEEEEECCGG
T ss_pred             HHHcCCcEEEEECCcc
Confidence            1   234577777654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.20  E-value=0.0016  Score=46.63  Aligned_cols=74  Identities=20%  Similarity=0.176  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.+       ++|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        63 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  136 (260)
T 2zat_A           63 LSVTGTVCHVGKA------EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP  136 (260)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3688999999984      33444433       79999999996431        123456789999999988887653


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       137 ~~~~~~~g~iv~isS~~~  154 (260)
T 2zat_A          137 EMEKRGGGSVLIVSSVGA  154 (260)
T ss_dssp             HHHHTTCEEEEEECCGGG
T ss_pred             HHHHcCCCEEEEEechhh
Confidence            2   23356777777544

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.20  E-value=0.0015  Score=46.68  Aligned_cols=74  Identities=15%  Similarity=0.114  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+|+....       ...+...+++|+.|+..+.+.+...
T Consensus        51 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  124 (254)
T 1hdc_A           51 DAARYQHLDVTIE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA  124 (254)
T ss_dssp             GGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3688999999985      33444443       79999999997542       1234567899999998666544321


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       125 ~~~~~~g~iv~isS~~~  141 (254)
T 1hdc_A          125 MKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             HHHHTCEEEEEECCGGG
T ss_pred             HHHcCCCEEEEECchhh
Confidence               22356777777543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.19  E-value=0.0012  Score=48.94  Aligned_cols=61  Identities=11%  Similarity=0.073  Sum_probs=45.1

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++.     ...+++++++|+|||+|+....   .......+.+|+.|+.+++++|.+.
T Consensus        45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  108 (345)
T 2bll_A           45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY  108 (345)
T ss_dssp             TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence            35667888875431     3356666789999999986542   2345668899999999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.18  E-value=0.001  Score=48.57  Aligned_cols=73  Identities=16%  Similarity=0.155  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        97 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  170 (291)
T 3ijr_A           97 VKCVLLPGDLSDE------QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALS  170 (291)
T ss_dssp             CCEEEEESCTTSH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4789999999985      33444433       68999999997532        123456889999999999998765


Q ss_pred             Hh-ccchhhcccccC
Q psy3446          79 IR-QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~-~~~~~~~~ss~~   92 (166)
                      .. +...++++||..
T Consensus       171 ~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          171 HLKQGDVIINTASIV  185 (291)
T ss_dssp             TCCTTCEEEEECCTH
T ss_pred             HHhhCCEEEEEechH
Confidence            32 223566666643

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.18  E-value=0.0018  Score=45.98  Aligned_cols=73  Identities=14%  Similarity=0.184  Sum_probs=51.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQ   81 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~   81 (166)
                      ++.++.+|++++      +.++++   ..++|+|||+|+.....       ..+...+.+|+.|+.++.+.+...   .+
T Consensus        51 ~~~~~~~D~~~~------~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~  124 (246)
T 2ag5_A           51 GIQTRVLDVTKK------KQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK  124 (246)
T ss_dssp             TEEEEECCTTCH------HHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEeeCCCH------HHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            688999999985      334443   34689999999975432       234567889999999988876542   23


Q ss_pred             cchhhcccccCc
Q psy3446          82 LKLFLRLKTEVP   93 (166)
Q Consensus        82 ~~~~~~~ss~~~   93 (166)
                      ...++++||...
T Consensus       125 ~g~iv~isS~~~  136 (246)
T 2ag5_A          125 SGNIINMSSVAS  136 (246)
T ss_dssp             CEEEEEECCSBT
T ss_pred             CceEEEEechHh
Confidence            356777777543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.17  E-value=0.0015  Score=46.66  Aligned_cols=71  Identities=13%  Similarity=0.062  Sum_probs=49.2

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---   79 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---   79 (166)
                      .++.+|++++      ++++.+.       .++|++||+||.....       ..+...+++|+.|+.++.+.+...   
T Consensus        52 ~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~  125 (256)
T 2d1y_A           52 AFFQVDLEDE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK  125 (256)
T ss_dssp             EEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            7899999985      3344333       3689999999975432       234568899999999998877543   


Q ss_pred             hccchhhcccccCc
Q psy3446          80 RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~~~~~~~~ss~~~   93 (166)
                      .+...++++||...
T Consensus       126 ~~~g~iv~isS~~~  139 (256)
T 2d1y_A          126 VGGGAIVNVASVQG  139 (256)
T ss_dssp             TTCEEEEEECCGGG
T ss_pred             cCCcEEEEEccccc
Confidence            12356777777543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.17  E-value=0.0016  Score=46.32  Aligned_cols=72  Identities=13%  Similarity=0.147  Sum_probs=50.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        55 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  128 (248)
T 3op4_A           55 DNGKGMALNVTNP------ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRG  128 (248)
T ss_dssp             GGEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccceEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3578899999985      33444443       78999999997542       2234568899999999998876542


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++++||.
T Consensus       129 m~~~~~g~iv~isS~  143 (248)
T 3op4_A          129 MMKKRQGRIINVGSV  143 (248)
T ss_dssp             HHHHTCEEEEEECCH
T ss_pred             HHHcCCCEEEEEcch
Confidence               223456777664

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.17  E-value=0.0017  Score=46.49  Aligned_cols=73  Identities=15%  Similarity=0.113  Sum_probs=49.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      ++.++.+|++++      +.++.+.+      ++|+|||+|+....       ...+...+++|+.|+.++.+.+...  
T Consensus        59 ~~~~~~~D~~~~------~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~  132 (260)
T 2z1n_A           59 QVDIVAGDIREP------GDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMV  132 (260)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEccCCCH------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            688999999985      33444443      48999999996532       1234567899999998777665432  


Q ss_pred             -hccchhhcccccCc
Q psy3446          80 -RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 -~~~~~~~~~ss~~~   93 (166)
                       .+...++++||...
T Consensus       133 ~~~~g~iv~isS~~~  147 (260)
T 2z1n_A          133 EKGWGRMVYIGSVTL  147 (260)
T ss_dssp             HHTCEEEEEECCGGG
T ss_pred             hcCCcEEEEECchhh
Confidence             23356777777543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.17  E-value=0.0018  Score=45.57  Aligned_cols=59  Identities=24%  Similarity=0.264  Sum_probs=44.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+..
T Consensus        52 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (235)
T 3l77_A           52 VEVFYHHLDVSKA------ESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD  124 (235)
T ss_dssp             CCEEEEECCTTCH------HHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CeEEEEEeccCCH------HHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4789999999995      34555544       689999999976432       23456789999999999887754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.17  E-value=0.0012  Score=49.28  Aligned_cols=102  Identities=18%  Similarity=0.134  Sum_probs=62.7

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc------ceeeeEeecCCCCCCCCCCCHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH------FLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~------~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      -.|+-+||++++|.++...+.             +++..+..+.+.......      ...++.++.+|+.+      ..
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d------~~   70 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQ-------------TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD------QN   70 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC------HH
T ss_pred             CEEEEECCCchHHHHHHHHHH-------------hCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccC------HH
Confidence            368889999988888754332             111112111111110000      01345667788743      45


Q ss_pred             hHHHHhcc--ccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         117 DRELLRTN--VNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       117 ~~~~l~~~--~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .+++++++  +|+|||+|+....   .......+.+|+.|+.+++++|.+.+
T Consensus        71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  122 (357)
T 1rkx_A           71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG  122 (357)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            56677665  8999999995322   23456688999999999999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0014  Score=47.38  Aligned_cols=72  Identities=10%  Similarity=0.059  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        81 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  154 (271)
T 3v2g_A           81 GRAVAIRADNRDA------EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH  154 (271)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999975321       234567899999999999887764


Q ss_pred             h-ccchhhccccc
Q psy3446          80 R-QLKLFLRLKTE   91 (166)
Q Consensus        80 ~-~~~~~~~~ss~   91 (166)
                      . +...++++||.
T Consensus       155 m~~~g~iv~isS~  167 (271)
T 3v2g_A          155 LGDGGRIITIGSN  167 (271)
T ss_dssp             CCTTCEEEEECCG
T ss_pred             HhcCCEEEEEeCh
Confidence            2 23345666553

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.16  E-value=0.0012  Score=48.43  Aligned_cols=73  Identities=21%  Similarity=0.241  Sum_probs=50.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||.....         ..+...+++|+.|+.++.+.+..
T Consensus        79 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (297)
T 1xhl_A           79 KINAVVADVTEA------SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE  152 (297)
T ss_dssp             GEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEecCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            689999999985      33444433       689999999965321         23456889999999999887765


Q ss_pred             Hhc--cchhhcccccCc
Q psy3446          79 IRQ--LKLFLRLKTEVP   93 (166)
Q Consensus        79 ~~~--~~~~~~~ss~~~   93 (166)
                      ...  ...++++||...
T Consensus       153 ~~~~~~g~IV~isS~~~  169 (297)
T 1xhl_A          153 HLIKTKGEIVNVSSIVA  169 (297)
T ss_dssp             HHHHTTCEEEEECCGGG
T ss_pred             HHHhcCCEEEEEcCchh
Confidence            321  146777777543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.16  E-value=0.0014  Score=48.98  Aligned_cols=59  Identities=15%  Similarity=0.228  Sum_probs=45.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+.++++++|+|||+||....   .......+.+|+.|+.+++++|.+.
T Consensus        71 ~v~~~~~Dl~------d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~  132 (344)
T 2gn4_A           71 RMRFFIGDVR------DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN  132 (344)
T ss_dssp             TEEEEECCTT------CHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCC------CHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC
Confidence            5667788874      345677888899999999996542   1234568899999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.15  E-value=0.0016  Score=46.96  Aligned_cols=73  Identities=12%  Similarity=0.198  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  146 (266)
T 3grp_A           73 KDVFVFSANLSDR------KSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHS  146 (266)
T ss_dssp             SSEEEEECCTTSH------HHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999995      33444433       78999999997542       1234567889999987777655432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       147 ~~~~~~g~Iv~isS~~  162 (266)
T 3grp_A          147 MMRRRYGRIINITSIV  162 (266)
T ss_dssp             HHHHTCEEEEEECCC-
T ss_pred             HHHcCCcEEEEECCHH
Confidence               2234577777654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.15  E-value=0.0012  Score=46.94  Aligned_cols=72  Identities=17%  Similarity=0.298  Sum_probs=49.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        52 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  125 (247)
T 3rwb_A           52 KKARAIAADISDP------GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQ  125 (247)
T ss_dssp             TTEEECCCCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4689999999985      33444433       689999999975432       234567899999999988874432


Q ss_pred             ----hccchhhccccc
Q psy3446          80 ----RQLKLFLRLKTE   91 (166)
Q Consensus        80 ----~~~~~~~~~ss~   91 (166)
                          .....++++||.
T Consensus       126 ~~~~~~~g~iv~isS~  141 (247)
T 3rwb_A          126 MRAAGKAGRVISIASN  141 (247)
T ss_dssp             HHHHTCCEEEEEECCT
T ss_pred             HHHcCCCcEEEEECch
Confidence                113456666664

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.15  E-value=0.0014  Score=47.42  Aligned_cols=73  Identities=14%  Similarity=0.043  Sum_probs=50.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++++.+       ++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        75 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  148 (271)
T 4ibo_A           75 HDAEAVAFDVTSE------SEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR  148 (271)
T ss_dssp             CCEEECCCCTTCH------HHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999985      33444443       68999999997532       1234567899999999998766543


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       149 ~~~~~~g~iV~isS~~  164 (271)
T 4ibo_A          149 MIPRGYGKIVNIGSLT  164 (271)
T ss_dssp             HHHHTCEEEEEECCGG
T ss_pred             HHhcCCcEEEEEccHH
Confidence            1   223566776644

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.14  E-value=0.0018  Score=46.95  Aligned_cols=73  Identities=19%  Similarity=0.098  Sum_probs=50.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +..+.+.       .++|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        75 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  148 (277)
T 3gvc_A           75 CGAAACRVDVSDE------QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR  148 (277)
T ss_dssp             SSCEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      3344333       368999999997543       2234568899999999988876543


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       149 m~~~~~g~Iv~isS~~  164 (277)
T 3gvc_A          149 MIERGGGAIVNLSSLA  164 (277)
T ss_dssp             HHHTTCEEEEEECCGG
T ss_pred             HHhcCCcEEEEEcchh
Confidence            2   233566777654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.14  E-value=0.0018  Score=46.46  Aligned_cols=73  Identities=12%  Similarity=0.113  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceee-c---c----hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATV-R---F----DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~-~---~----~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.       .++|++||+|+.. .   +    ...+...+.+|+.|+.++.+.+..
T Consensus        56 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  129 (262)
T 1zem_A           56 VEARSYVCDVTSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR  129 (262)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3688999999985      3343333       2789999999965 2   1    123456789999999998887665


Q ss_pred             Hh---ccchhhcccccC
Q psy3446          79 IR---QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~~~~~~~~ss~~   92 (166)
                      ..   +...++++||..
T Consensus       130 ~~~~~~~g~iv~isS~~  146 (262)
T 1zem_A          130 QMITQNYGRIVNTASMA  146 (262)
T ss_dssp             HHHHHTCEEEEEECCHH
T ss_pred             HHHhcCCcEEEEEcchh
Confidence            31   234567777653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.14  E-value=0.00087  Score=49.61  Aligned_cols=59  Identities=24%  Similarity=0.264  Sum_probs=45.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+++++.++|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        56 ~~~~~~~Dl~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~  117 (337)
T 1r6d_A           56 RLRFVHGDIR------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA  117 (337)
T ss_dssp             TEEEEECCTT------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CeEEEEcCCC------CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            5667788874      3456778888999999999975432   234568899999999999999875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.14  E-value=0.0012  Score=49.01  Aligned_cols=59  Identities=29%  Similarity=0.372  Sum_probs=45.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      +...+++++++  +|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        51 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~  114 (347)
T 1orr_A           51 NFEFVHGDIR------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY  114 (347)
T ss_dssp             CCEEEECCTT------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCC------CHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            4566778874      34567777777  99999999975432   245668899999999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.14  E-value=0.0021  Score=46.38  Aligned_cols=74  Identities=15%  Similarity=0.179  Sum_probs=51.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.        ..+|++||+|+.....       ..+...+++|+.|+.++.+.+..
T Consensus        70 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  143 (273)
T 1ae1_A           70 LNVEGSVCDLLSR------TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP  143 (273)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3688999999985      3344443        5689999999975322       23456788999999999887743


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       144 ~m~~~~~g~iv~isS~~~  161 (273)
T 1ae1_A          144 LLKASQNGNVIFLSSIAG  161 (273)
T ss_dssp             HHHHHTSEEEEEECCGGG
T ss_pred             HHHhcCCcEEEEEcCHhh
Confidence            2   22356777777544

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.14  E-value=0.00094  Score=49.60  Aligned_cols=60  Identities=25%  Similarity=0.366  Sum_probs=46.5

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.      +...++++++++|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        54 ~~~~~~~~Dl~------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  116 (348)
T 1oc2_A           54 DRVELVVGDIA------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY  116 (348)
T ss_dssp             SSEEEEECCTT------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCC------CHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            35667788874      3466788888999999999976432   234568899999999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.14  E-value=0.0012  Score=47.93  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=50.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++      +.++.+.+       ++|++||+||....       ...+...+++|+.|+.++.+.+... 
T Consensus        78 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  151 (276)
T 2b4q_A           78 DCQAIPADLSSE------AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL  151 (276)
T ss_dssp             CEEECCCCTTSH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            688999999985      33444433       68999999997532       2334568899999998887766432 


Q ss_pred             --hcc----chhhcccccCc
Q psy3446          80 --RQL----KLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~----~~~~~~ss~~~   93 (166)
                        .+.    ..++++||...
T Consensus       152 ~~~~~~~~~g~iV~isS~~~  171 (276)
T 2b4q_A          152 RRSASAENPARVINIGSVAG  171 (276)
T ss_dssp             HHHCCSSSCEEEEEECCGGG
T ss_pred             HhccCCCCCCEEEEECCHHH
Confidence              122    46777777654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.14  E-value=0.0016  Score=48.24  Aligned_cols=73  Identities=11%  Similarity=0.105  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus       107 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  180 (317)
T 3oec_A          107 RRIIARQADVRDL------ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS  180 (317)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4689999999985      33444433       68999999997642       2334567899999999998877543


Q ss_pred             h--c--cchhhcccccC
Q psy3446          80 R--Q--LKLFLRLKTEV   92 (166)
Q Consensus        80 ~--~--~~~~~~~ss~~   92 (166)
                      .  .  ...++++||..
T Consensus       181 m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          181 MIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHTCSCEEEEEECCGG
T ss_pred             HHHcCCCCEEEEECcHH
Confidence            2  1  23466777654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.14  E-value=0.0017  Score=46.93  Aligned_cols=72  Identities=13%  Similarity=0.086  Sum_probs=50.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+... 
T Consensus        78 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  151 (270)
T 3ftp_A           78 EGRGAVLNVNDA------TAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPM  151 (270)
T ss_dssp             CCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cEEEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            678999999985      33444433       689999999975422       234568899999999998876532 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       152 ~~~~~g~iv~isS~~  166 (270)
T 3ftp_A          152 MKARGGRIVNITSVV  166 (270)
T ss_dssp             HHHTCEEEEEECCHH
T ss_pred             HHcCCCEEEEECchh
Confidence              1234567777643

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.14  E-value=0.0012  Score=47.01  Aligned_cols=74  Identities=14%  Similarity=0.080  Sum_probs=50.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        63 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  136 (256)
T 3ezl_A           63 FDFYASEGNVGDW------DSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDG  136 (256)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeeEEEecCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999985      33444433       689999999976422       334568899999988887765432


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       137 ~~~~~~g~iv~isS~~~  153 (256)
T 3ezl_A          137 MVERGWGRIINISSVNG  153 (256)
T ss_dssp             HHHHTCEEEEEECCCCG
T ss_pred             HHhcCCCEEEEEcchhh
Confidence               22345777777543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.13  E-value=0.0018  Score=46.59  Aligned_cols=72  Identities=14%  Similarity=0.073  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +..+.+.+       ++|++||+||.....       ..+...+.+|+.|+.++.+.+...
T Consensus        75 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  148 (269)
T 3gk3_A           75 RDFKAYAVDVADF------ESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAG  148 (269)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999985      33444333       789999999975322       234567899999999988876542


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++++||.
T Consensus       149 ~~~~~~g~iv~isS~  163 (269)
T 3gk3_A          149 MVERRFGRIVNIGSV  163 (269)
T ss_dssp             HHHHTCEEEEEECCH
T ss_pred             HHhcCCCEEEEeCCh
Confidence               223456677664

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.13  E-value=0.0022  Score=45.52  Aligned_cols=73  Identities=15%  Similarity=0.160  Sum_probs=49.7

Q ss_pred             ce-EEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KI-SAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~-~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      ++ .++.+|++++      +.++.+.      .++|+|||+||.....       ..+...+++|+.|+.++.+.+... 
T Consensus        58 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  131 (254)
T 2wsb_A           58 AVAARIVADVTDA------EAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAM  131 (254)
T ss_dssp             GEEEEEECCTTCH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cceeEEEEecCCH------HHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            45 8899999985      3344443      4789999999975432       234567889999988777765432 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       132 ~~~~~~~iv~isS~~~  147 (254)
T 2wsb_A          132 VARGAGAIVNLGSMSG  147 (254)
T ss_dssp             HHHTCEEEEEECCGGG
T ss_pred             HhcCCcEEEEEecchh
Confidence              23456777777654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.12  E-value=0.002  Score=46.31  Aligned_cols=72  Identities=11%  Similarity=0.014  Sum_probs=49.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE-   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~-   78 (166)
                      .++.++.+|++++      ++.+++.+       .+|+|||+||....       ...+...+++|+.|+.++.+.+.. 
T Consensus        76 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  149 (267)
T 4iiu_A           76 GNGRLLSFDVANR------EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMP  149 (267)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4789999999985      33444433       78999999997642       223456789999999998886532 


Q ss_pred             ---Hhccchhhccccc
Q psy3446          79 ---IRQLKLFLRLKTE   91 (166)
Q Consensus        79 ---~~~~~~~~~~ss~   91 (166)
                         ......++++||.
T Consensus       150 ~~~~~~~g~iv~isS~  165 (267)
T 4iiu_A          150 MIGARQGGRIITLSSV  165 (267)
T ss_dssp             HHHHTSCEEEEEECCH
T ss_pred             HHhcCCCcEEEEEcch
Confidence               1233456677664

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=97.12  E-value=0.0012  Score=48.85  Aligned_cols=59  Identities=27%  Similarity=0.303  Sum_probs=45.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+++++.++|+|||+|+.....   .+...++.+|+.|+.+++++|.+.
T Consensus        55 ~~~~~~~Dl~------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  116 (336)
T 2hun_A           55 RYTFVKGDVA------DYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE  116 (336)
T ss_dssp             TEEEEECCTT------CHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCC------CHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5667778874      3456777778899999999975432   234568899999999999999876

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.12  E-value=0.0019  Score=45.84  Aligned_cols=74  Identities=9%  Similarity=0.111  Sum_probs=49.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++      +...++.+   ++|++||+||.....       ..+...+++|+.|+.++.+.+...   .
T Consensus        60 ~~~~~~~~D~~~~------~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  133 (249)
T 3f9i_A           60 DNYTIEVCNLANK------EECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK  133 (249)
T ss_dssp             SSEEEEECCTTSH------HHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             cCccEEEcCCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4788999999984      34555554   689999999976422       234568899999999988876432   2


Q ss_pred             ccchhhcccccCc
Q psy3446          81 QLKLFLRLKTEVP   93 (166)
Q Consensus        81 ~~~~~~~~ss~~~   93 (166)
                      +...++++||...
T Consensus       134 ~~g~iv~isS~~~  146 (249)
T 3f9i_A          134 RYGRIINISSIVG  146 (249)
T ss_dssp             TCEEEEEECCCCC
T ss_pred             CCcEEEEEccHHh
Confidence            2346777777543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.12  E-value=0.0017  Score=46.77  Aligned_cols=74  Identities=15%  Similarity=0.122  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        59 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  132 (266)
T 3p19_A           59 PNTLCAQVDVTDK------YTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP  132 (266)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEecCCCH------HHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3688999999984      33444433       78999999997532       1234567899999999977765432


Q ss_pred             ---hccchhhcccccCc
Q psy3446          80 ---RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ---~~~~~~~~~ss~~~   93 (166)
                         .+...++++||...
T Consensus       133 ~~~~~~g~IV~isS~~~  149 (266)
T 3p19_A          133 MKARNCGTIINISSIAG  149 (266)
T ss_dssp             HHHHTCCEEEEECCGGG
T ss_pred             HHhcCCcEEEEEcChhh
Confidence               23346777777543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.12  E-value=0.0021  Score=46.18  Aligned_cols=74  Identities=20%  Similarity=0.175  Sum_probs=49.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....        ...+...+++|+.|+..+.+.+..
T Consensus        64 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  137 (267)
T 1iy8_A           64 AEVLTTVADVSDE------AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK  137 (267)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4688999999985      33444433       68999999997533        123456789999999877665433


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       138 ~~~~~~~g~iv~isS~~~  155 (267)
T 1iy8_A          138 IMREQGSGMVVNTASVGG  155 (267)
T ss_dssp             HHHHHTCCEEEEECCGGG
T ss_pred             HHHHcCCCEEEEEcchhh
Confidence            2   22356777777543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.11  E-value=0.0018  Score=47.48  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        91 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  164 (293)
T 3rih_A           91 GNVIGVRLDVSDP------GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP  164 (293)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred             CcEEEEEEeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999985      3334333       367999999997532       2234567899999999998876421


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       165 m~~~~~g~iV~isS~~  180 (293)
T 3rih_A          165 LTASGRGRVILTSSIT  180 (293)
T ss_dssp             HHHHSSCEEEEECCSB
T ss_pred             HHHcCCCEEEEEeChh
Confidence               2335677777654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.11  E-value=0.0016  Score=46.88  Aligned_cols=73  Identities=12%  Similarity=0.109  Sum_probs=51.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        68 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  141 (270)
T 3is3_A           68 SDAIAIKADIRQV------PEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH  141 (270)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999985      33444433       689999999976432       234567899999999999887764


Q ss_pred             hc-cchhhcccccC
Q psy3446          80 RQ-LKLFLRLKTEV   92 (166)
Q Consensus        80 ~~-~~~~~~~ss~~   92 (166)
                      .. ...++++||..
T Consensus       142 ~~~~g~iv~isS~~  155 (270)
T 3is3_A          142 LTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCTTCEEEEECCTT
T ss_pred             HhcCCeEEEEeCch
Confidence            32 23466666643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.11  E-value=0.0015  Score=47.41  Aligned_cols=72  Identities=17%  Similarity=0.137  Sum_probs=49.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++      ++.+.+.+       ++|++||+||...    +    ...+...+++|+.|+.++.+.+...
T Consensus        64 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  137 (281)
T 3svt_A           64 AIRYEPTDITNE------DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAARE  137 (281)
T ss_dssp             EEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            789999999985      33444433       6899999999621    1    1233557899999999999877653


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       138 ~~~~~~g~iv~isS~~  153 (281)
T 3svt_A          138 MVRGGGGSFVGISSIA  153 (281)
T ss_dssp             HHHTTCEEEEEECCHH
T ss_pred             HHhcCCcEEEEEeCHH
Confidence            2   123567777654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.00088  Score=48.66  Aligned_cols=73  Identities=8%  Similarity=0.144  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeec---------chhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR---------FDEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~---------~~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++.      ..+.+.+       .+|++||+||...         -...+...+++|+.|+.++.+.+.
T Consensus        79 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  152 (280)
T 4da9_A           79 ARVIFLRADLADLS------SHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVL  152 (280)
T ss_dssp             CCEEEEECCTTSGG------GHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            46899999999964      2343333       7899999999732         122345678899999999888765


Q ss_pred             HHh---c---cchhhcccccC
Q psy3446          78 EIR---Q---LKLFLRLKTEV   92 (166)
Q Consensus        78 ~~~---~---~~~~~~~ss~~   92 (166)
                      ...   +   ...++++||..
T Consensus       153 ~~~~~~~~~~~g~Iv~isS~~  173 (280)
T 4da9_A          153 KAMLASDARASRSIINITSVS  173 (280)
T ss_dssp             HHHHHHCCCCCEEEEEECCC-
T ss_pred             HHHHHhCCCCCCEEEEEcchh
Confidence            432   1   23567777654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.10  E-value=0.0007  Score=48.56  Aligned_cols=72  Identities=14%  Similarity=0.106  Sum_probs=50.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++      +.++.+.+       ++|+|||+||....           ...+...+++|+.|+.++.+.+
T Consensus        59 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  132 (261)
T 2wyu_A           59 GALLFRADVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA  132 (261)
T ss_dssp             CCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            478999999985      33444433       68999999997532           1234568899999999999887


Q ss_pred             HHHh-ccchhhcccccC
Q psy3446          77 REIR-QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~-~~~~~~~~ss~~   92 (166)
                      .... +...++++||..
T Consensus       133 ~~~~~~~g~iv~isS~~  149 (261)
T 2wyu_A          133 EPLLREGGGIVTLTYYA  149 (261)
T ss_dssp             TTTEEEEEEEEEEECGG
T ss_pred             HHHhccCCEEEEEeccc
Confidence            6532 123566777643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.10  E-value=0.0017  Score=46.96  Aligned_cols=73  Identities=12%  Similarity=0.028  Sum_probs=49.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcC-------ccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTN-------VNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~-------~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.++       +|++||+|+....        ...+...+++|+.|+.++.+.+..
T Consensus        69 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  142 (272)
T 2nwq_A           69 TRVLPLTLDVRDR------AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP  142 (272)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999984      445555543       5999999997532        123456789999998887776543


Q ss_pred             H---hccc-hhhcccccC
Q psy3446          79 I---RQLK-LFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~-~~~~~ss~~   92 (166)
                      .   .+.. .++++||..
T Consensus       143 ~m~~~~~g~~IV~isS~~  160 (272)
T 2nwq_A          143 RLIAHGAGASIVNLGSVA  160 (272)
T ss_dssp             HHHHHCTTCEEEEECCGG
T ss_pred             HHHhcCCCcEEEEeCCch
Confidence            2   1223 567777654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.09  E-value=0.0022  Score=46.18  Aligned_cols=72  Identities=13%  Similarity=0.067  Sum_probs=49.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++..++.+       ++|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        79 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  152 (271)
T 4iin_A           79 YKAAVIKFDAASE------SDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKV  152 (271)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            4789999999985      33444433       789999999976432       234568899999999888776542


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++++||.
T Consensus       153 ~~~~~~g~iv~isS~  167 (271)
T 4iin_A          153 MSKSRFGSVVNVASI  167 (271)
T ss_dssp             HHHHTCEEEEEECCH
T ss_pred             HhhcCCCEEEEEech
Confidence               123456666664

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.07  E-value=0.0011  Score=48.55  Aligned_cols=60  Identities=15%  Similarity=0.123  Sum_probs=46.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+.....        .|+.++.++++.|++....++|++
T Consensus        55 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           55 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             CCeEEEeCCCCCH------HHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe
Confidence            4689999999984      45778888999999999976432        378899999999987432556654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.07  E-value=0.0023  Score=45.68  Aligned_cols=73  Identities=11%  Similarity=0.135  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +..+.+.+       .+|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        50 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  123 (254)
T 3kzv_A           50 DRFFYVVGDITED------SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALP  123 (254)
T ss_dssp             GGEEEEESCTTSH------HHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4689999999995      33444433       68999999997432        123456789999999999887743


Q ss_pred             Hh--ccchhhcccccC
Q psy3446          79 IR--QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~--~~~~~~~~ss~~   92 (166)
                      ..  ....++++||..
T Consensus       124 ~m~~~~g~iv~isS~~  139 (254)
T 3kzv_A          124 ELKKTNGNVVFVSSDA  139 (254)
T ss_dssp             HHHHHTCEEEEECCSC
T ss_pred             HHHhcCCeEEEEcCch
Confidence            21  124566777654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.06  E-value=0.0021  Score=45.42  Aligned_cols=71  Identities=13%  Similarity=0.189  Sum_probs=47.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+..+.+.+....
T Consensus        50 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  123 (235)
T 3l6e_A           50 AVIGIVADLAHH------EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLI  123 (235)
T ss_dssp             GEEEEECCTTSH------HHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEECCCCCH------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            589999999985      33444333       689999999975422       2345678999999999888775532


Q ss_pred             c--cchhhccccc
Q psy3446          81 Q--LKLFLRLKTE   91 (166)
Q Consensus        81 ~--~~~~~~~ss~   91 (166)
                      .  ...++++||.
T Consensus       124 ~~~~~~iv~isS~  136 (235)
T 3l6e_A          124 GERGGVLANVLSS  136 (235)
T ss_dssp             TTTCEEEEEECCE
T ss_pred             HHcCCEEEEEeCH
Confidence            1  1255666654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.06  E-value=0.0018  Score=46.97  Aligned_cols=73  Identities=14%  Similarity=0.038  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....        ..+...+++|+.|+.++.+.+..
T Consensus        76 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (286)
T 3uve_A           76 RRIVTAEVDVRDY------DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP  149 (286)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4789999999985      33444433       789999999975432        23455889999999999887654


Q ss_pred             Hh----ccchhhcccccC
Q psy3446          79 IR----QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~----~~~~~~~~ss~~   92 (166)
                      ..    ....++++||..
T Consensus       150 ~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A          150 HMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHTSCEEEEEECCGG
T ss_pred             HHHhCCCCcEEEEECchh
Confidence            32    123567777653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.06  E-value=0.0026  Score=46.12  Aligned_cols=73  Identities=10%  Similarity=0.066  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  146 (279)
T 3sju_A           73 HDVDGSSCDVTST------DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRA  146 (279)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhch
Confidence            4689999999985      33443332       68999999997542       1234557889999999998876541


Q ss_pred             -----hccchhhcccccC
Q psy3446          80 -----RQLKLFLRLKTEV   92 (166)
Q Consensus        80 -----~~~~~~~~~ss~~   92 (166)
                           .+...++++||..
T Consensus       147 ~~~~~~~~g~iV~isS~~  164 (279)
T 3sju_A          147 GGMREAGWGRIVNIASTG  164 (279)
T ss_dssp             SSHHHHTCEEEEEECCGG
T ss_pred             hhHhhcCCcEEEEECChh
Confidence                 2234567777654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.05  E-value=0.0015  Score=46.81  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=50.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  127 (258)
T 3oid_A           54 VKVLVVKANVGQP------AKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL  127 (258)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999995      33444433       579999999864321       233557899999999998877543


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       128 m~~~~~g~iv~isS~~  143 (258)
T 3oid_A          128 MEKNGGGHIVSISSLG  143 (258)
T ss_dssp             HHTTTCEEEEEEEEGG
T ss_pred             HHhcCCcEEEEECchh
Confidence            2   234577777754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.05  E-value=0.0019  Score=46.51  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      ..+.+.       ..+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        70 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  143 (266)
T 4egf_A           70 TDVHTVAIDLAEPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKA  143 (266)
T ss_dssp             CCEEEEECCTTSTT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46899999999974      233332       378999999997542       1234567899999999998876543


Q ss_pred             hc----cchhhcccccCc
Q psy3446          80 RQ----LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~----~~~~~~~ss~~~   93 (166)
                      ..    ...++++||...
T Consensus       144 ~~~~~~~g~iv~isS~~~  161 (266)
T 4egf_A          144 MVAAGEGGAIITVASAAA  161 (266)
T ss_dssp             HHHHTSCEEEEEECCGGG
T ss_pred             HHhcCCCeEEEEEcchhh
Confidence            21    235667776543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.04  E-value=0.0016  Score=47.49  Aligned_cols=69  Identities=4%  Similarity=-0.100  Sum_probs=47.0

Q ss_pred             HHhcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhhcccccCccceeeeEeecCC
Q psy3446          37 LLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR-QLKLFLRLKTEVPHFLEKISAVAGD  105 (166)
Q Consensus        37 ~~~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~ss~~~~~~~~~~~v~gD  105 (166)
                      ...+++|.|||+|+..-.       .......+.+|+.+|.++++.++... +...|++.|+...++.....+..+|
T Consensus        47 ~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~  123 (298)
T 4b4o_A           47 SGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED  123 (298)
T ss_dssp             HCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTT
T ss_pred             hhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCccccc
Confidence            345689999999985311       12224577899999999999988743 3345777888877765544455555

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.04  E-value=0.0017  Score=46.70  Aligned_cols=74  Identities=19%  Similarity=0.125  Sum_probs=51.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+|+.....       ..+...+.+|+.|+.++.+.+...
T Consensus        52 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  125 (263)
T 2a4k_A           52 AEAIAVVADVSDP------KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV  125 (263)
T ss_dssp             SSEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       579999999975421       233557889999999999887764


Q ss_pred             hc-cchhhcccccCc
Q psy3446          80 RQ-LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~-~~~~~~~ss~~~   93 (166)
                      .+ ...++++||...
T Consensus       126 ~~~~g~iv~isS~~~  140 (263)
T 2a4k_A          126 LEEGGSLVLTGSVAG  140 (263)
T ss_dssp             CCTTCEEEEECCCTT
T ss_pred             HhcCCEEEEEecchh
Confidence            21 235677776543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.04  E-value=0.0017  Score=46.37  Aligned_cols=73  Identities=7%  Similarity=-0.053  Sum_probs=50.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++      +.++.+.+      .+|++||+||....       ...+...+++|+.|+.++.+.+... 
T Consensus        56 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  129 (252)
T 3h7a_A           56 GRIVARSLDARNE------DEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLM  129 (252)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEEEECcCCCH------HHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4689999999995      34444443      68999999997542       1234567899999999988876432 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       130 ~~~~~g~iv~isS~~  144 (252)
T 3h7a_A          130 LAHGQGKIFFTGATA  144 (252)
T ss_dssp             HHHTCEEEEEEEEGG
T ss_pred             HhcCCcEEEEECCHH
Confidence              1224566777654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.04  E-value=0.0023  Score=46.83  Aligned_cols=73  Identities=12%  Similarity=0.014  Sum_probs=51.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch--------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD--------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~--------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....        ..+...+++|+.|+.++.+.+..
T Consensus        89 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  162 (299)
T 3t7c_A           89 RRIIASQVDVRDF------DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP  162 (299)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4789999999985      33444433       689999999975432        23456889999999999887654


Q ss_pred             Hh----ccchhhcccccC
Q psy3446          79 IR----QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~----~~~~~~~~ss~~   92 (166)
                      ..    ....++++||..
T Consensus       163 ~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          163 HIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHTTSCEEEEEECCGG
T ss_pred             HHHhcCCCcEEEEECChh
Confidence            31    234567777654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.03  E-value=0.002  Score=47.76  Aligned_cols=99  Identities=12%  Similarity=0.061  Sum_probs=61.0

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc---ceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH---FLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~---~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      -.|+-+||++++|..+...+.             +++..+..+.+.......   ...++.++.+|+.+      ...++
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d------~~~~~   82 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLL-------------ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIAD------HALVN   82 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTC------HHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHH-------------HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCC------HHHHH
Confidence            358889999888877644321             111122222211110000   01355677888743      45677


Q ss_pred             HHhcc--ccEEEEccccccch--HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTN--VNVIFHGAATVRFD--EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~--~d~i~h~aa~~~~~--~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++++  +|+|||+|+.....  ....  +.+|+.|+.+++++|.+.
T Consensus        83 ~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~  127 (333)
T 2q1w_A           83 QLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN  127 (333)
T ss_dssp             HHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT
T ss_pred             HHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh
Confidence            77777  99999999976542  2223  889999999999999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.03  E-value=0.0019  Score=46.10  Aligned_cols=74  Identities=19%  Similarity=0.131  Sum_probs=49.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+|+.....       ..+...+++|+.|+..+.+.+...
T Consensus        52 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  125 (253)
T 1hxh_A           52 ERSMFVRHDVSSE------ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA  125 (253)
T ss_dssp             TTEEEECCCTTCH------HHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence            3688999999985      33444333       579999999975421       334567899999998877655432


Q ss_pred             hc--cchhhcccccCc
Q psy3446          80 RQ--LKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~--~~~~~~~ss~~~   93 (166)
                      ..  ...++++||...
T Consensus       126 ~~~~~g~iv~isS~~~  141 (253)
T 1hxh_A          126 MKETGGSIINMASVSS  141 (253)
T ss_dssp             HTTTCEEEEEECCGGG
T ss_pred             HHHcCCEEEEEcchhh
Confidence            11  146777777543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.03  E-value=0.0019  Score=45.86  Aligned_cols=71  Identities=21%  Similarity=0.149  Sum_probs=48.8

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      +.++.+|++++      +.++.+.+       .+|++||+||....       ...+...+.+|+.|+.++.+.+.... 
T Consensus        51 ~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  124 (245)
T 1uls_A           51 AHPVVMDVADP------ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR  124 (245)
T ss_dssp             CEEEECCTTCH------HHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            78899999985      33444333       58999999997532       12345678999999999988776532 


Q ss_pred             --ccchhhcccccC
Q psy3446          81 --QLKLFLRLKTEV   92 (166)
Q Consensus        81 --~~~~~~~~ss~~   92 (166)
                        +...++++||..
T Consensus       125 ~~~~g~iv~isS~~  138 (245)
T 1uls_A          125 EKNPGSIVLTASRV  138 (245)
T ss_dssp             TTCCEEEEEECCGG
T ss_pred             hcCCCEEEEEccch
Confidence              234566666643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.03  E-value=0.002  Score=46.99  Aligned_cols=79  Identities=10%  Similarity=0.019  Sum_probs=50.5

Q ss_pred             cceEEEecCCCCCCCC-------CC----HHhHHHHh-------cCccEEEEcceeecc---------------------
Q psy3446          14 EKISAVAGDVSLPGLG-------LS----ETDRELLR-------TNVNVIFHGAATVRF---------------------   54 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~g-------l~----~~~~~~~~-------~~~d~Vih~aa~~~~---------------------   54 (166)
                      .++.++.+|++++..-       ..    .+.++.+.       ..+|++||+||....                     
T Consensus        60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~  139 (291)
T 1e7w_A           60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM  139 (291)
T ss_dssp             TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred             CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence            4689999999997500       00    00233332       378999999997532                     


Q ss_pred             hhhHHHHHHhhhhcHHHHHHHHHHHh---c------cchhhcccccC
Q psy3446          55 DEKIQLAVAINVLGVRAMLELAREIR---Q------LKLFLRLKTEV   92 (166)
Q Consensus        55 ~~~~~~~~~~nv~gt~~ll~l~~~~~---~------~~~~~~~ss~~   92 (166)
                      ...+...+.+|+.|+.++.+.+....   +      ...++++||..
T Consensus       140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~  186 (291)
T 1e7w_A          140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  186 (291)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechh
Confidence            23345678999999999988776432   1      23566666654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.02  E-value=0.0026  Score=45.97  Aligned_cols=74  Identities=9%  Similarity=0.071  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++.      +.+.+.      .++|++||+||....       ...+...+++|+.|+.++.+.+... 
T Consensus        79 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  152 (273)
T 3uf0_A           79 GSAEAVVADLADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAM  152 (273)
T ss_dssp             CEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            46899999999953      333332      378999999997642       1234568899999999998876432 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       153 ~~~~~g~IV~isS~~~  168 (273)
T 3uf0_A          153 LAHGSGRIVTIASMLS  168 (273)
T ss_dssp             HHHTCEEEEEECCGGG
T ss_pred             HhcCCCEEEEEcchHh
Confidence              23345677776543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.02  E-value=0.002  Score=47.96  Aligned_cols=78  Identities=10%  Similarity=0.017  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCC------------HHhHHHHh-------cCccEEEEcceeecc--------------------
Q psy3446          14 EKISAVAGDVSLPGLGLS------------ETDRELLR-------TNVNVIFHGAATVRF--------------------   54 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~------------~~~~~~~~-------~~~d~Vih~aa~~~~--------------------   54 (166)
                      .++.++.+|++++.- +.            ...++.+.       ..+|++||+||....                    
T Consensus        97 ~~~~~~~~Dl~d~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~  175 (328)
T 2qhx_A           97 NSAITVQADLSNVAT-APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREA  175 (328)
T ss_dssp             TCEEEEECCCSSSCB-CC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CH
T ss_pred             CeEEEEEeeCCCchh-ccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccc
Confidence            468999999999750 00            00233333       278999999997532                    


Q ss_pred             -hhhHHHHHHhhhhcHHHHHHHHHHHh---c------cchhhcccccC
Q psy3446          55 -DEKIQLAVAINVLGVRAMLELAREIR---Q------LKLFLRLKTEV   92 (166)
Q Consensus        55 -~~~~~~~~~~nv~gt~~ll~l~~~~~---~------~~~~~~~ss~~   92 (166)
                       ...+...+.+|+.|+..+.+.+....   +      ...++++||..
T Consensus       176 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~  223 (328)
T 2qhx_A          176 METATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  223 (328)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchh
Confidence             23345678999999999988765431   1      24566666654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.01  E-value=0.0023  Score=46.65  Aligned_cols=75  Identities=17%  Similarity=0.212  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------------------------------
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------------------------------   55 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------------------------------   55 (166)
                      .++.++.+|++++.     +..+.+       ...+|++||+||.....                               
T Consensus        62 ~~~~~~~~Dl~~~~-----~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (311)
T 3o26_A           62 ENVVFHQLDVTDPI-----ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQE  136 (311)
T ss_dssp             CSEEEEECCTTSCH-----HHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHT
T ss_pred             CceEEEEccCCCcH-----HHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhc
Confidence            47899999999961     122222       23799999999976321                               


Q ss_pred             ------hhHHHHHHhhhhcHHHHHHHHHHHh---ccchhhcccccCc
Q psy3446          56 ------EKIQLAVAINVLGVRAMLELAREIR---QLKLFLRLKTEVP   93 (166)
Q Consensus        56 ------~~~~~~~~~nv~gt~~ll~l~~~~~---~~~~~~~~ss~~~   93 (166)
                            ..+...+.+|+.|+..+.+.+....   +..+++++||...
T Consensus       137 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~  183 (311)
T 3o26_A          137 LMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTG  183 (311)
T ss_dssp             TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             ccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCc
Confidence                  1234568999999999888775432   2346777777643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.01  E-value=0.0027  Score=45.77  Aligned_cols=73  Identities=11%  Similarity=0.123  Sum_probs=50.2

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .+..+.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+... 
T Consensus        54 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  127 (269)
T 3vtz_A           54 VSDHFKIDVTNE------EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM  127 (269)
T ss_dssp             SSEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceeEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            578899999985      33444433       789999999975422       233557889999999988876542 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       128 ~~~~~g~iv~isS~~~  143 (269)
T 3vtz_A          128 LAIGHGSIINIASVQS  143 (269)
T ss_dssp             HHHTCEEEEEECCGGG
T ss_pred             HHcCCCEEEEECchhh
Confidence              22345777777544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.01  E-value=0.0023  Score=45.83  Aligned_cols=74  Identities=12%  Similarity=0.115  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +.+..+.       ..+|+|||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        78 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  151 (262)
T 3rkr_A           78 GEAESHACDLSHS------DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAP  151 (262)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceeEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4689999999985      3344333       358999999997321        123456889999999999887654


Q ss_pred             H---hccchhhcccccCc
Q psy3446          79 I---RQLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~~   93 (166)
                      .   .+...++++||...
T Consensus       152 ~~~~~~~g~iv~isS~~~  169 (262)
T 3rkr_A          152 AMIAAKRGHIINISSLAG  169 (262)
T ss_dssp             HHHHTTCCEEEEECSSCS
T ss_pred             HHHhCCCceEEEEechhh
Confidence            2   23345777777543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.01  E-value=0.0028  Score=45.70  Aligned_cols=73  Identities=12%  Similarity=0.133  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+||.....       ..+...+++|+.|+..+.+.+...
T Consensus        53 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  126 (264)
T 3tfo_A           53 GTALAQVLDVTDR------HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI  126 (264)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      3344433       3689999999976432       234567899999999888766432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       127 m~~~~~g~IV~isS~~  142 (264)
T 3tfo_A          127 MEAQRSGQIINIGSIG  142 (264)
T ss_dssp             HHHHTCEEEEEECCGG
T ss_pred             HHhCCCeEEEEEcCHH
Confidence               2234567777654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.00  E-value=0.0023  Score=47.99  Aligned_cols=73  Identities=11%  Similarity=0.178  Sum_probs=51.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus       101 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  174 (346)
T 3kvo_A          101 GKALPCIVDVRDE------QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY  174 (346)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999985      33444433       78999999997542       1334567899999999999887654


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       175 m~~~~~g~IV~iSS~~  190 (346)
T 3kvo_A          175 LKKSKVAHILNISPPL  190 (346)
T ss_dssp             HTTCSSCEEEEECCCC
T ss_pred             HHHCCCCEEEEECCHH
Confidence            2   224566676644

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.00  E-value=0.0022  Score=48.52  Aligned_cols=58  Identities=19%  Similarity=0.119  Sum_probs=44.2

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc--c-ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT--N-VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~--~-~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +.++.+|+.+      ...++++++  + +|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        71 ~~~~~~Dl~d------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~  134 (397)
T 1gy8_A           71 AALEVGDVRN------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH  134 (397)
T ss_dssp             CEEEESCTTC------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCCCC------HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh
Confidence            5677788743      345666665  5 99999999976542   345678899999999999999875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.99  E-value=0.0015  Score=47.47  Aligned_cols=72  Identities=22%  Similarity=0.202  Sum_probs=49.6

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||....           ...+...+.+|+.|+.++.+.+
T Consensus        72 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  145 (285)
T 2p91_A           72 SDLVVKCDVSLD------EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTREL  145 (285)
T ss_dssp             CCCEEECCTTCH------HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            478899999985      33444433       68999999997532           1234567899999999999887


Q ss_pred             HHHh--ccchhhcccccC
Q psy3446          77 REIR--QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~--~~~~~~~~ss~~   92 (166)
                      ....  ....++++||..
T Consensus       146 ~~~~~~~~g~iv~isS~~  163 (285)
T 2p91_A          146 LPLMEGRNGAIVTLSYYG  163 (285)
T ss_dssp             GGGGTTSCCEEEEEECGG
T ss_pred             HHHHHHcCCEEEEEccch
Confidence            6532  124566776643

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.99  E-value=0.0033  Score=45.11  Aligned_cols=72  Identities=11%  Similarity=0.065  Sum_probs=49.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++      ++.+.+.       ..+|++||+|+....       ...+...+++|+.|+.++.+.+....
T Consensus        60 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  133 (265)
T 3lf2_A           60 RLFASVCDVLDA------LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQL  133 (265)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            589999999985      3344333       368999999997532       22345678999999999998776532


Q ss_pred             c---cchhhcccccC
Q psy3446          81 Q---LKLFLRLKTEV   92 (166)
Q Consensus        81 ~---~~~~~~~ss~~   92 (166)
                      .   ...++++||..
T Consensus       134 ~~~~~g~iv~isS~~  148 (265)
T 3lf2_A          134 ESRADAAIVCVNSLL  148 (265)
T ss_dssp             TTSTTEEEEEEEEGG
T ss_pred             hccCCeEEEEECCcc
Confidence            1   23466666654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.99  E-value=0.0026  Score=46.13  Aligned_cols=72  Identities=10%  Similarity=0.085  Sum_probs=47.9

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEc-ceeecc------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHG-AATVRF------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~-aa~~~~------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ++.++.+|++++      +.++.+.       .++|+|||+ |+....      ...+...+++|+.|+.++.+.+....
T Consensus        79 ~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  152 (286)
T 1xu9_A           79 SAHYIAGTMEDM------TFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPML  152 (286)
T ss_dssp             EEEEEECCTTCH------HHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            688999999985      2344333       378999999 454321      22335678999999999888765431


Q ss_pred             --ccchhhcccccC
Q psy3446          81 --QLKLFLRLKTEV   92 (166)
Q Consensus        81 --~~~~~~~~ss~~   92 (166)
                        ....++++||..
T Consensus       153 ~~~~g~iv~isS~~  166 (286)
T 1xu9_A          153 KQSNGSIVVVSSLA  166 (286)
T ss_dssp             HHHTCEEEEEEEGG
T ss_pred             HHCCCEEEEECCcc
Confidence              224567777654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.98  E-value=0.0018  Score=48.02  Aligned_cols=59  Identities=20%  Similarity=0.191  Sum_probs=43.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +++..+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+..
T Consensus        86 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  158 (322)
T 3qlj_A           86 GEAVADGSNVADW------DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA  158 (322)
T ss_dssp             CEEEEECCCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            4688999999985      33444433       789999999976421       23456889999999999887654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.98  E-value=0.0026  Score=45.84  Aligned_cols=72  Identities=15%  Similarity=0.183  Sum_probs=49.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      ++.++.+|++++      +.++.+.+       ++|++||+||....        ...+...+++|+.|+.++.+.+...
T Consensus        55 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  128 (270)
T 1yde_A           55 GAVFILCDVTQE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY  128 (270)
T ss_dssp             TEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            478999999985      33444433       68999999997532        1234567899999999998877542


Q ss_pred             h--ccchhhcccccC
Q psy3446          80 R--QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~--~~~~~~~~ss~~   92 (166)
                      .  ....++++||..
T Consensus       129 ~~~~~g~iv~isS~~  143 (270)
T 1yde_A          129 LRKSQGNVINISSLV  143 (270)
T ss_dssp             HHHHTCEEEEECCHH
T ss_pred             HHHCCCEEEEEcCcc
Confidence            1  234567777643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.98  E-value=0.0021  Score=46.74  Aligned_cols=73  Identities=14%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        65 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  138 (285)
T 3sc4_A           65 GQALPIVGDIRDG------DAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH  138 (285)
T ss_dssp             SEEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999999985      33444433       789999999976421       233557889999999998877653


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       139 m~~~~~g~iv~isS~~  154 (285)
T 3sc4_A          139 MKGRDNPHILTLSPPI  154 (285)
T ss_dssp             TTTSSSCEEEECCCCC
T ss_pred             HHHcCCcEEEEECChh
Confidence            2   223566666643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.97  E-value=0.0032  Score=46.03  Aligned_cols=73  Identities=14%  Similarity=0.088  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||....           ...+...+.+|+.|+.++.+.
T Consensus        81 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  154 (293)
T 3grk_A           81 GAFVAGHCDVADA------ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRR  154 (293)
T ss_dssp             TCEEEEECCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CCceEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence            3688999999995      33444433       68999999997531           223456789999999999988


Q ss_pred             HHHHh-ccchhhcccccC
Q psy3446          76 AREIR-QLKLFLRLKTEV   92 (166)
Q Consensus        76 ~~~~~-~~~~~~~~ss~~   92 (166)
                      +.... +...++++||..
T Consensus       155 ~~~~m~~~g~Iv~isS~~  172 (293)
T 3grk_A          155 AEKLMADGGSILTLTYYG  172 (293)
T ss_dssp             HHHHTTTCEEEEEEECGG
T ss_pred             HHHhccCCCEEEEEeehh
Confidence            77642 233566666643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.97  E-value=0.0026  Score=46.65  Aligned_cols=73  Identities=16%  Similarity=0.075  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++++.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        80 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  153 (301)
T 3tjr_A           80 FDAHGVVCDVRHL------DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR  153 (301)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            3689999999985      33444433       78999999997532       2234568899999999999876542


Q ss_pred             h---c-cchhhcccccC
Q psy3446          80 R---Q-LKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~-~~~~~~~ss~~   92 (166)
                      .   + ...++++||..
T Consensus       154 ~~~~~~~g~iv~isS~~  170 (301)
T 3tjr_A          154 LLEQGTGGHIAFTASFA  170 (301)
T ss_dssp             HHHHCSCEEEEEECCGG
T ss_pred             HHhcCCCcEEEEeCchh
Confidence            1   1 24567777654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.96  E-value=0.0014  Score=46.98  Aligned_cols=73  Identities=14%  Similarity=0.046  Sum_probs=49.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  146 (267)
T 3gdg_A           73 IKAKAYKCQVDSY------ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHH  146 (267)
T ss_dssp             CCEECCBCCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceeEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHH
Confidence            4789999999985      33444333       579999999976422       234568899999999998877432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       147 ~~~~~~g~iv~isS~~  162 (267)
T 3gdg_A          147 FKERGTGSLVITASMS  162 (267)
T ss_dssp             HHHHTCCEEEEECCGG
T ss_pred             HHHcCCceEEEEcccc
Confidence               1234566666643

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.96  E-value=0.0027  Score=45.90  Aligned_cols=73  Identities=11%  Similarity=0.134  Sum_probs=50.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        77 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  150 (277)
T 4fc7_A           77 RRCLPLSMDVRAP------PAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEK  150 (277)
T ss_dssp             SCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            4689999999995      33444433       68999999996432       1234568899999999998876432


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       151 ~~~~~~g~iv~isS~~  166 (277)
T 4fc7_A          151 FFRDHGGVIVNITATL  166 (277)
T ss_dssp             THHHHCEEEEEECCSH
T ss_pred             HHHcCCCEEEEECchh
Confidence               1234566776653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.95  E-value=0.002  Score=47.60  Aligned_cols=59  Identities=17%  Similarity=0.206  Sum_probs=44.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+++++++  +|+|||+|+.....   ......+.+|+.|+.++++.|.++
T Consensus        53 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  116 (345)
T 2z1m_A           53 DVKIIHMDLL------EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV  116 (345)
T ss_dssp             TEEECCCCTT------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceeEEECCCC------CHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            4566778864      34556666664  59999999975432   245678899999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.95  E-value=0.0024  Score=45.22  Aligned_cols=73  Identities=11%  Similarity=0.106  Sum_probs=50.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  127 (247)
T 3lyl_A           54 FKARGLVLNISDI------ESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRG  127 (247)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4789999999985      33444333       57999999997632       2234568899999999988876543


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       128 ~~~~~~g~iv~isS~~  143 (247)
T 3lyl_A          128 MMKKRWGRIISIGSVV  143 (247)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHHcCCeEEEEEcchh
Confidence               1223566776643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.95  E-value=0.0025  Score=47.32  Aligned_cols=59  Identities=15%  Similarity=0.095  Sum_probs=44.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.+      ...++++++  ++|+|||+|+.....   ......+.+|+.|+.+++++|++.
T Consensus        59 ~~~~~~~D~~~------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (348)
T 1ek6_A           59 SVEFEEMDILD------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH  122 (348)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEECCCCC------HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh
Confidence            45667788743      455677766  799999999975432   345668899999999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.94  E-value=0.0027  Score=45.23  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=48.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc---h---hhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF---D---EKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~---~---~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++      +..+.+.       ..+|++||+||....   .   ..+...+++|+.|+..+.+.+... 
T Consensus        59 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  132 (250)
T 3nyw_A           59 QEPIVLPLDITDC------TKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIM  132 (250)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcceEEeccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5688999999985      3344333       368999999997432   2   234567899999999988876432 


Q ss_pred             --hccchhhcccccC
Q psy3446          80 --RQLKLFLRLKTEV   92 (166)
Q Consensus        80 --~~~~~~~~~ss~~   92 (166)
                        .+...++++||..
T Consensus       133 ~~~~~g~iv~isS~~  147 (250)
T 3nyw_A          133 KVQKNGYIFNVASRA  147 (250)
T ss_dssp             HHHTCEEEEEECC--
T ss_pred             HhCCCeEEEEEccHH
Confidence              2234566666643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.94  E-value=0.0018  Score=47.31  Aligned_cols=74  Identities=16%  Similarity=0.112  Sum_probs=50.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +..+.+.       ..+|++||+|+....        ...+...+++|+.|+.++.+.+..
T Consensus       100 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  173 (294)
T 3r3s_A          100 RKAVLLPGDLSDE------SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIP  173 (294)
T ss_dssp             CCEEECCCCTTSH------HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             CcEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4789999999985      3344333       368999999997431        123456889999999999988765


Q ss_pred             Hh-ccchhhcccccCc
Q psy3446          79 IR-QLKLFLRLKTEVP   93 (166)
Q Consensus        79 ~~-~~~~~~~~ss~~~   93 (166)
                      .. +...++++||...
T Consensus       174 ~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          174 LLPKGASIITTSSIQA  189 (294)
T ss_dssp             GCCTTCEEEEECCGGG
T ss_pred             HhhcCCEEEEECChhh
Confidence            32 1235666666543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.93  E-value=0.0021  Score=46.14  Aligned_cols=73  Identities=11%  Similarity=0.120  Sum_probs=49.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh-c----
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR-Q----   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~-~----   81 (166)
                      .++.++.+|++++      +.++.+.+       .+|+|||+||... ...+...+.+|+.|+..+...+.... +    
T Consensus        58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  130 (267)
T 2gdz_A           58 QKTLFIQCDVADQ------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG  130 (267)
T ss_dssp             GGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred             CceEEEecCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC
Confidence            3688999999985      33444433       5799999999754 34566778999998876665543321 1    


Q ss_pred             -cchhhcccccCc
Q psy3446          82 -LKLFLRLKTEVP   93 (166)
Q Consensus        82 -~~~~~~~ss~~~   93 (166)
                       ...++++||...
T Consensus       131 ~~g~iv~isS~~~  143 (267)
T 2gdz_A          131 EGGIIINMSSLAG  143 (267)
T ss_dssp             CCEEEEEECCGGG
T ss_pred             CCCEEEEeCCccc
Confidence             345777777554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.93  E-value=0.0015  Score=46.95  Aligned_cols=72  Identities=15%  Similarity=0.078  Sum_probs=49.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc------------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~------------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      +..++.+|++++      +.++.+.+       ++|++||+||....            ...+...+++|+.|+.++.+.
T Consensus        60 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  133 (265)
T 1qsg_A           60 SDIVLQCDVAED------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA  133 (265)
T ss_dssp             CCCEEECCTTCH------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CcEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            347899999985      33444433       68999999997531            123455889999999999988


Q ss_pred             HHHHh-ccchhhcccccC
Q psy3446          76 AREIR-QLKLFLRLKTEV   92 (166)
Q Consensus        76 ~~~~~-~~~~~~~~ss~~   92 (166)
                      +.... +...++++||..
T Consensus       134 ~~~~~~~~g~iv~isS~~  151 (265)
T 1qsg_A          134 CRSMLNPGSALLTLSYLG  151 (265)
T ss_dssp             HGGGEEEEEEEEEEECGG
T ss_pred             HHHHhccCCEEEEEcchh
Confidence            86542 123566777644

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=96.93  E-value=0.0025  Score=46.61  Aligned_cols=59  Identities=22%  Similarity=0.224  Sum_probs=42.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      +...++++.+  ++|+|+|+|+.....   ......+.+|+.|+.++++.|.+.
T Consensus        44 ~~~~~~~Dl~------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~  107 (311)
T 2p5y_A           44 GVPFFRVDLR------DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY  107 (311)
T ss_dssp             TCCEECCCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CeEEEECCCC------CHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445667763      3445666665  799999999965432   234567899999999999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.92  E-value=0.0016  Score=46.09  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=51.0

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc-----CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~-----~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      ..++.++.+|++++      ++++.+.+     .+|++||+||....       ...+...+++|+.|+.++.+.+....
T Consensus        43 ~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~  116 (244)
T 4e4y_A           43 AENLKFIKADLTKQ------QDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL  116 (244)
T ss_dssp             CTTEEEEECCTTCH------HHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE
T ss_pred             cccceEEecCcCCH------HHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence            35689999999985      34555544     68999999997532       12345678999999999988776532


Q ss_pred             c-cchhhcccccC
Q psy3446          81 Q-LKLFLRLKTEV   92 (166)
Q Consensus        81 ~-~~~~~~~ss~~   92 (166)
                      . ...++++||..
T Consensus       117 ~~~g~iv~~sS~~  129 (244)
T 4e4y_A          117 KVGASIVFNGSDQ  129 (244)
T ss_dssp             EEEEEEEEECCGG
T ss_pred             ccCcEEEEECCHH
Confidence            1 22466666644

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.92  E-value=0.0028  Score=45.48  Aligned_cols=73  Identities=16%  Similarity=0.190  Sum_probs=49.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+|+....        ...+...+++|+.|+.++.+.+..
T Consensus        60 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  133 (264)
T 3ucx_A           60 RRALSVGTDITDD------AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP  133 (264)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4789999999995      33444433       68999999986421        123456789999999999887654


Q ss_pred             Hh--ccchhhcccccC
Q psy3446          79 IR--QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~--~~~~~~~~ss~~   92 (166)
                      ..  ....++++||..
T Consensus       134 ~~~~~~g~iv~isS~~  149 (264)
T 3ucx_A          134 ALEESKGAVVNVNSMV  149 (264)
T ss_dssp             HHHHHTCEEEEECCGG
T ss_pred             HHHHcCCEEEEECcch
Confidence            31  123566777654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=96.91  E-value=0.0024  Score=45.73  Aligned_cols=58  Identities=19%  Similarity=0.225  Sum_probs=45.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+.++++++|+|||+|+... ..+....+.+|+.|+.+++++|.+.
T Consensus        43 ~~~~~~~Dl~------d~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~  100 (267)
T 3ay3_A           43 HEEIVACDLA------DAQAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL  100 (267)
T ss_dssp             TEEECCCCTT------CHHHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             CccEEEccCC------CHHHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3456777864      34567788889999999998653 3445678899999999999999875

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.91  E-value=0.0011  Score=49.30  Aligned_cols=56  Identities=9%  Similarity=-0.074  Sum_probs=41.2

Q ss_pred             HHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhhcccc
Q psy3446          35 RELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR-QLKLFLRLKT   90 (166)
Q Consensus        35 ~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~ss   90 (166)
                      +.+.++++|+|||+||.... +.+..+.+++|+.++.++++.+++.. ...++...|+
T Consensus        74 ~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~sn  131 (327)
T 1y7t_A           74 PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (327)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence            45566899999999998753 44556788999999999999998853 2224444443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.91  E-value=0.0026  Score=46.92  Aligned_cols=101  Identities=12%  Similarity=0.075  Sum_probs=63.0

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-------cceeeeEeecCCCCCCCCCCCH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-------HFLEKISAVAGDVSLPGLGLSE  115 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-------~~~~~~~~v~gD~~~~~~gls~  115 (166)
                      ..|+-+||++++|..+...+.             +++..+..+.+..+...       ....++.++.+|+.      +.
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~-------------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~------d~   75 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLL-------------EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA------DA   75 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHH-------------HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTT------CH
T ss_pred             CeEEEECCCChHHHHHHHHHH-------------HCCCeEEEEeCCCccccccchhhccccCceEEEECCCC------CH
Confidence            568899999988887744322             11111212221111000       01135567778874      34


Q ss_pred             HhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         116 TDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       116 ~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ..+++++++  +|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        76 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  127 (335)
T 1rpn_A           76 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF  127 (335)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh
Confidence            556666664  69999999975532   245678899999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.91  E-value=0.003  Score=45.54  Aligned_cols=72  Identities=21%  Similarity=0.210  Sum_probs=49.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.+       .+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        77 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  150 (267)
T 3u5t_A           77 GKALTAQADVSDP------AAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR  150 (267)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999985      33444433       689999999975321       224557889999999998877654


Q ss_pred             h-ccchhhccccc
Q psy3446          80 R-QLKLFLRLKTE   91 (166)
Q Consensus        80 ~-~~~~~~~~ss~   91 (166)
                      . ....++++||.
T Consensus       151 ~~~~g~iv~isS~  163 (267)
T 3u5t_A          151 LRVGGRIINMSTS  163 (267)
T ss_dssp             EEEEEEEEEECCT
T ss_pred             HhhCCeEEEEeCh
Confidence            2 22356666654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=96.91  E-value=0.0019  Score=48.22  Aligned_cols=59  Identities=20%  Similarity=0.298  Sum_probs=45.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+.++++  ++|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        51 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~  114 (361)
T 1kew_A           51 RYNFEHADIC------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY  114 (361)
T ss_dssp             TEEEEECCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEECCCC------CHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5667788874      3456777766  799999999975432   234568899999999999999875

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.91  E-value=0.00067  Score=46.54  Aligned_cols=69  Identities=14%  Similarity=0.150  Sum_probs=46.4

Q ss_pred             EEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh-ccchhh
Q psy3446          18 AVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR-QLKLFL   86 (166)
Q Consensus        18 ~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~   86 (166)
                      ++.+|++++      +.++.+.+   ++|+|||+||.....       ..+...+++|+.|+.++++.+.... +...++
T Consensus        38 ~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv  111 (202)
T 3d7l_A           38 DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFT  111 (202)
T ss_dssp             SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEE
T ss_pred             ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEE
Confidence            467899884      34555554   489999999965321       2334577899999999998876541 124566


Q ss_pred             cccccC
Q psy3446          87 RLKTEV   92 (166)
Q Consensus        87 ~~ss~~   92 (166)
                      ++|+..
T Consensus       112 ~~sS~~  117 (202)
T 3d7l_A          112 LTTGIM  117 (202)
T ss_dssp             EECCGG
T ss_pred             EEcchh
Confidence            666654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.90  E-value=0.0025  Score=45.58  Aligned_cols=73  Identities=19%  Similarity=0.180  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.+       .+|++||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        59 ~~~~~~~~Dl~d~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  132 (253)
T 2nm0_A           59 EGFLAVKCDITDT------EQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA  132 (253)
T ss_dssp             TTSEEEECCTTSH------HHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3578999999985      33444433       479999999975422       234567899999999988876542


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       133 m~~~~~g~iv~isS~~  148 (253)
T 2nm0_A          133 MLRAKKGRVVLISSVV  148 (253)
T ss_dssp             HHHHTCEEEEEECCCC
T ss_pred             HHhcCCCEEEEECchh
Confidence               1334677777754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=96.90  E-value=0.0033  Score=47.37  Aligned_cols=59  Identities=14%  Similarity=0.117  Sum_probs=44.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+.+++++  +|+|||+|+.....   ......+.+|+.|+.+++++|.+.
T Consensus        84 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~  147 (381)
T 1n7h_A           84 LMKLHYADLT------DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH  147 (381)
T ss_dssp             CEEEEECCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEECCCC------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5667778864      34556666664  69999999976543   345668899999999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.89  E-value=0.003  Score=45.87  Aligned_cols=73  Identities=16%  Similarity=0.067  Sum_probs=50.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      +..+.+.+       .+|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        57 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  130 (280)
T 3tox_A           57 GEAAALAGDVGDE------ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVP  130 (280)
T ss_dssp             CCEEECCCCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4789999999985      33444433       68999999996521        123456889999999999887654


Q ss_pred             Hh---ccchhhcccccC
Q psy3446          79 IR---QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~~---~~~~~~~~ss~~   92 (166)
                      ..   +...++++||..
T Consensus       131 ~~~~~~~g~iv~isS~~  147 (280)
T 3tox_A          131 AIAALGGGSLTFTSSFV  147 (280)
T ss_dssp             HHHHTTCEEEEEECCSB
T ss_pred             HHHHcCCCEEEEEcChh
Confidence            32   223566666643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.88  E-value=0.0041  Score=44.90  Aligned_cols=73  Identities=11%  Similarity=0.101  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+||.....       ..+...+++|+.|+..+.+.+...
T Consensus        62 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  135 (274)
T 3e03_A           62 GQGLALKCDIREE------DQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH  135 (274)
T ss_dssp             SEEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence            4688999999985      3344433       2689999999975321       233557889999999998877653


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++++||..
T Consensus       136 m~~~~~g~iv~isS~~  151 (274)
T 3e03_A          136 LLQAPNPHILTLAPPP  151 (274)
T ss_dssp             HTTSSSCEEEECCCCC
T ss_pred             HHhcCCceEEEECChH
Confidence            2   223566666643

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.88  E-value=0.0027  Score=45.95  Aligned_cols=73  Identities=16%  Similarity=0.129  Sum_probs=49.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc------------hhhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~------------~~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+||....            ...+...+++|+.|+.++.+
T Consensus        75 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  148 (280)
T 3nrc_A           75 NPAAVLPCDVISD------QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAK  148 (280)
T ss_dssp             CCSEEEECCTTCH------HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCceEEEeecCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            3588999999985      3344443       257999999997642            12334578999999999998


Q ss_pred             HHHHHh--ccchhhcccccC
Q psy3446          75 LAREIR--QLKLFLRLKTEV   92 (166)
Q Consensus        75 l~~~~~--~~~~~~~~ss~~   92 (166)
                      .+....  ....++++||..
T Consensus       149 ~~~~~~~~~~g~iv~isS~~  168 (280)
T 3nrc_A          149 EGRSMMKNRNASMVALTYIG  168 (280)
T ss_dssp             HHHHHHTTTTCEEEEEECGG
T ss_pred             HHHHHhhcCCCeEEEEeccc
Confidence            876542  223456666543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.87  E-value=0.00052  Score=48.32  Aligned_cols=98  Identities=9%  Similarity=0.083  Sum_probs=60.6

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc-ceeee-EeecCCCCCCCCCCCHHhHHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH-FLEKI-SAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~-~~~~~-~~v~gD~~~~~~gls~~~~~~  120 (166)
                      -.|+-+||++++|..+...+             ++++..+..+.+-.+.... ...++ ..+.+|+.        ..+.+
T Consensus        22 ~~ilVtGatG~iG~~l~~~L-------------~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--------~~~~~   80 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSEL-------------KNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--------EDFSH   80 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHH-------------HHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--------SCCGG
T ss_pred             CeEEEECCCChHHHHHHHHH-------------HhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--------HHHHH
Confidence            35888999988887764322             1121111111111110000 01245 67788876        22345


Q ss_pred             HhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         121 LRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       121 l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ...++|+|||+|+... .......+.+|+.|+.++++.|++.
T Consensus        81 ~~~~~D~vi~~ag~~~-~~~~~~~~~~n~~~~~~l~~a~~~~  121 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGP-HTGADKTILIDLWGAIKTIQEAEKR  121 (236)
T ss_dssp             GGTTCSEEEECCCCCT-TSCHHHHHHTTTHHHHHHHHHHHHH
T ss_pred             HHcCCCEEEECCCCCC-CCCccccchhhHHHHHHHHHHHHHc
Confidence            5678999999999654 3456778899999999999999875

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.87  E-value=0.004  Score=43.62  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCc----cEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHhc-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNV----NVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIRQ-   81 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~----d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~~-   81 (166)
                      .++.++.+|++++      +.++.+.+++    |+|||+||.....       ..+...+++|+.|+.++.+.+..... 
T Consensus        47 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  120 (230)
T 3guy_A           47 NNVGYRARDLASH------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKD  120 (230)
T ss_dssp             SCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hccCeEeecCCCH------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4688999999984      4466665554    8999999975321       23355789999999999987765422 


Q ss_pred             -cchhhcccccC
Q psy3446          82 -LKLFLRLKTEV   92 (166)
Q Consensus        82 -~~~~~~~ss~~   92 (166)
                       ...++++||..
T Consensus       121 ~~~~iv~isS~~  132 (230)
T 3guy_A          121 QPVNVVMIMSTA  132 (230)
T ss_dssp             SCCEEEEECCGG
T ss_pred             CCCeEEEEeecc
Confidence             12556666643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.87  E-value=0.0022  Score=45.84  Aligned_cols=73  Identities=10%  Similarity=0.133  Sum_probs=50.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +.+.+.       ..+|++||+|+....       ...+...+++|+.|+.++.+.+...
T Consensus        54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  127 (255)
T 4eso_A           54 PRVHALRSDIADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL  127 (255)
T ss_dssp             GGEEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             CcceEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            47899999999853      333332       368999999997642       2234567899999999998887653


Q ss_pred             h-ccchhhcccccC
Q psy3446          80 R-QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~-~~~~~~~~ss~~   92 (166)
                      . +...++++||..
T Consensus       128 ~~~~g~iv~isS~~  141 (255)
T 4eso_A          128 IREGGSIVFTSSVA  141 (255)
T ss_dssp             EEEEEEEEEECCGG
T ss_pred             HhcCCEEEEECChh
Confidence            2 223566666644

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.86  E-value=0.0037  Score=44.83  Aligned_cols=72  Identities=13%  Similarity=0.163  Sum_probs=49.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch------hhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD------EKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~------~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||.....      ..+...+++|+.|+.++.+.+.... 
T Consensus        72 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~  145 (260)
T 3gem_A           72 GAVALYGDFSCE------TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLT  145 (260)
T ss_dssp             TCEEEECCTTSH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCeEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            478999999985      33444433       689999999975321      2234578999999999988776532 


Q ss_pred             --ccchhhcccccC
Q psy3446          81 --QLKLFLRLKTEV   92 (166)
Q Consensus        81 --~~~~~~~~ss~~   92 (166)
                        +...++++||..
T Consensus       146 ~~~~g~iv~isS~~  159 (260)
T 3gem_A          146 ASEVADIVHISDDV  159 (260)
T ss_dssp             TSSSCEEEEECCGG
T ss_pred             hcCCcEEEEECChh
Confidence              223566776654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.86  E-value=0.0014  Score=49.64  Aligned_cols=60  Identities=15%  Similarity=0.044  Sum_probs=43.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccchH---HH---HHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFDE---KI---QLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~~---~~---~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++.++.+|+.      +...+++++++  +|+|||+|+......   +.   ...+.+|+.|+.+++++|.+.+
T Consensus        78 ~v~~~~~Dl~------d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~  145 (404)
T 1i24_A           78 SIELYVGDIC------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG  145 (404)
T ss_dssp             CCEEEESCTT------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceEEEECCCC------CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC
Confidence            4567788874      34567777776  999999999754322   11   2467899999999999998753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.86  E-value=0.0035  Score=45.49  Aligned_cols=71  Identities=18%  Similarity=0.098  Sum_probs=48.1

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      +.++.+|++++      ++++.+.       ..+|++||+||....        ...+...+++|+.|+.++.+.+....
T Consensus        85 ~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~  158 (281)
T 4dry_A           85 VRAVVCDVGDP------DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMM  158 (281)
T ss_dssp             EEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            58999999995      3344433       367999999997532        12345688999999988887765432


Q ss_pred             c-----cchhhcccccC
Q psy3446          81 Q-----LKLFLRLKTEV   92 (166)
Q Consensus        81 ~-----~~~~~~~ss~~   92 (166)
                      .     ...++++||..
T Consensus       159 ~~~~~~~g~IV~isS~~  175 (281)
T 4dry_A          159 KAQTPRGGRIINNGSIS  175 (281)
T ss_dssp             HHSSSCCEEEEEECCGG
T ss_pred             HhcCCCCcEEEEECCHH
Confidence            1     23566776643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.85  E-value=0.0017  Score=46.77  Aligned_cols=71  Identities=13%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc----------CccEEEEcceeec--------c----hhhHHHHHHhhhhcHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT----------NVNVIFHGAATVR--------F----DEKIQLAVAINVLGVRA   71 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~----------~~d~Vih~aa~~~--------~----~~~~~~~~~~nv~gt~~   71 (166)
                      .++.++.+|++++      +.++.+.+          .+|++||+|+...        +    ...+...+++|+.|+.+
T Consensus        56 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  129 (269)
T 2h7i_A           56 AKAPLLELDVQNE------EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS  129 (269)
T ss_dssp             SCCCEEECCTTCH------HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             CCceEEEccCCCH------HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHH
Confidence            3678999999985      33444433          7899999999754        1    12335578899999999


Q ss_pred             HHHHHHHHh-ccchhhcccc
Q psy3446          72 MLELAREIR-QLKLFLRLKT   90 (166)
Q Consensus        72 ll~l~~~~~-~~~~~~~~ss   90 (166)
                      +.+.+.... +...++++|+
T Consensus       130 l~~~~~~~~~~~g~iv~iss  149 (269)
T 2h7i_A          130 MAKALLPIMNPGGSIVGMDF  149 (269)
T ss_dssp             HHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHHHHHhhccCCeEEEEcC
Confidence            988776532 1234555554

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.84  E-value=0.0017  Score=48.72  Aligned_cols=87  Identities=8%  Similarity=0.056  Sum_probs=57.5

Q ss_pred             ceEEEecC-CCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          15 KISAVAGD-VSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        15 ~~~~~~gD-l~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      +++++.+| ++++      +.+..+++++|+|||+++....        ..|..+ +++++.+++....+.|+++||...
T Consensus        52 ~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~  116 (352)
T 1xgk_A           52 NVTLFQGPLLNNV------PLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDH  116 (352)
T ss_dssp             TEEEEESCCTTCH------HHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCG
T ss_pred             CcEEEECCccCCH------HHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHcCCccEEEEeCCccc
Confidence            68999999 9884      4577788899999999875321        236666 889999887421678889888652


Q ss_pred             cceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          94 HFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        94 ~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      ..       .+......++.++...++++.
T Consensus       117 ~~-------~~~~~~~~y~~sK~~~E~~~~  139 (352)
T 1xgk_A          117 SL-------YGPWPAVPMWAPKFTVENYVR  139 (352)
T ss_dssp             GG-------TSSCCCCTTTHHHHHHHHHHH
T ss_pred             cc-------cCCCCCccHHHHHHHHHHHHH
Confidence            10       011112345566766676653

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.82  E-value=0.0034  Score=45.36  Aligned_cols=74  Identities=14%  Similarity=0.078  Sum_probs=50.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.++.+.       ..+|++||+||.....       ..+...+++|+.|+.++.+.+...
T Consensus        73 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  146 (277)
T 3tsc_A           73 RRIVAAVVDTRDF------DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR  146 (277)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4689999999985      3344443       3589999999976432       234567899999999988876542


Q ss_pred             h----ccchhhcccccCc
Q psy3446          80 R----QLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~----~~~~~~~~ss~~~   93 (166)
                      .    ....++++||...
T Consensus       147 ~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A          147 IIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHTSCEEEEEECCGGG
T ss_pred             HHhcCCCCEEEEEccHhh
Confidence            1    1235777777543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.82  E-value=0.0062  Score=43.22  Aligned_cols=72  Identities=17%  Similarity=0.122  Sum_probs=48.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      +..+.+|++++      +.++.+.+       .+|++||+|+.....       ..+...+++|+.|+.++.+.+...  
T Consensus        55 ~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  128 (247)
T 1uzm_A           55 LFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQ  128 (247)
T ss_dssp             SEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             hcCeeccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            33588999884      33444333       689999999975421       234568899999999998877542  


Q ss_pred             -hccchhhcccccCc
Q psy3446          80 -RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 -~~~~~~~~~ss~~~   93 (166)
                       .+...++++||...
T Consensus       129 ~~~~g~iv~isS~~~  143 (247)
T 1uzm_A          129 RNKFGRMIFIGSVSG  143 (247)
T ss_dssp             HTTCEEEEEECCCCC
T ss_pred             hCCCCEEEEECCHhh
Confidence             22356777777543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=96.80  E-value=0.0023  Score=46.80  Aligned_cols=98  Identities=16%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC-ccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV-PHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~-~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .|+-+||++++|..+...+.             +++ ....+...+... .....++.++.+|+..       ..+.+++
T Consensus         3 ~vlVTGatG~iG~~l~~~L~-------------~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-------~~~~~~~   61 (313)
T 3ehe_A            3 LIVVTGGAGFIGSHVVDKLS-------------ESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-------DDIKDYL   61 (313)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-------------TTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-------SCCHHHH
T ss_pred             EEEEECCCchHHHHHHHHHH-------------hCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-------HHHHHHh
Confidence            47788888888877644332             111 111111111111 1112346677888753       2345666


Q ss_pred             ccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         123 TNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +++|+|+|+|+....   .......+.+|+.|+.+++++|++.
T Consensus        62 ~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~  104 (313)
T 3ehe_A           62 KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA  104 (313)
T ss_dssp             TTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            789999999995432   2346778899999999999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.79  E-value=0.00051  Score=47.81  Aligned_cols=56  Identities=13%  Similarity=0.208  Sum_probs=44.2

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++..+.+|+.+     +...+.++++++|+|||+|+...     ...+.+|+.|+.+++++|++.
T Consensus        41 ~~~~~~~~D~~d-----~~~~~~~~~~~~d~vi~~ag~~~-----~~~~~~n~~~~~~l~~a~~~~   96 (219)
T 3dqp_A           41 NNVKAVHFDVDW-----TPEEMAKQLHGMDAIINVSGSGG-----KSLLKVDLYGAVKLMQAAEKA   96 (219)
T ss_dssp             TTEEEEECCTTS-----CHHHHHTTTTTCSEEEECCCCTT-----SSCCCCCCHHHHHHHHHHHHT
T ss_pred             CCceEEEecccC-----CHHHHHHHHcCCCEEEECCcCCC-----CCcEeEeHHHHHHHHHHHHHh
Confidence            466778889754     25677888889999999998654     226778999999999999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.78  E-value=0.0027  Score=45.47  Aligned_cols=72  Identities=10%  Similarity=0.082  Sum_probs=49.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++.+.+.+       .+|++||+||....        ...+...+++|+.|+.++.+.+..
T Consensus        58 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  131 (259)
T 3edm_A           58 RSALAIKADLTNA------AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALP  131 (259)
T ss_dssp             SCCEEEECCTTCH------HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999995      33444433       78999999986511        122356789999999999988765


Q ss_pred             Hh-ccchhhccccc
Q psy3446          79 IR-QLKLFLRLKTE   91 (166)
Q Consensus        79 ~~-~~~~~~~~ss~   91 (166)
                      .. +...++++||.
T Consensus       132 ~~~~~g~iv~isS~  145 (259)
T 3edm_A          132 KMAKGGAIVTFSSQ  145 (259)
T ss_dssp             GEEEEEEEEEECCH
T ss_pred             HHhcCCEEEEEcCH
Confidence            42 12356666664

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=96.77  E-value=0.0036  Score=50.91  Aligned_cols=61  Identities=11%  Similarity=0.072  Sum_probs=45.3

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++     ....+++++++|+|||+|+....   ..+....+.+|+.|+.+++++|.+.
T Consensus       360 ~~v~~v~~Dl~d~-----~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~  423 (660)
T 1z7e_A          360 PHFHFVEGDISIH-----SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY  423 (660)
T ss_dssp             TTEEEEECCTTTC-----HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CceEEEECCCCCc-----HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh
Confidence            3566778887543     12355666789999999997542   3456678899999999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.75  E-value=0.0054  Score=44.08  Aligned_cols=74  Identities=11%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH---h
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI---R   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---~   80 (166)
                      .++.++.+|++++      +..+++.+   ++|++||+||....       ...+...+++|+.|+..+.+.+...   .
T Consensus        61 ~~~~~~~~D~~~~------~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~  134 (267)
T 3t4x_A           61 AILQPVVADLGTE------QGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER  134 (267)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEecCCCCH------HHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            3578899999985      33444444   78999999997532       1234557899999988877665432   2


Q ss_pred             ccchhhcccccCc
Q psy3446          81 QLKLFLRLKTEVP   93 (166)
Q Consensus        81 ~~~~~~~~ss~~~   93 (166)
                      +...++++||...
T Consensus       135 ~~g~iv~isS~~~  147 (267)
T 3t4x_A          135 KEGRVIFIASEAA  147 (267)
T ss_dssp             TEEEEEEECCGGG
T ss_pred             CCCEEEEEcchhh
Confidence            2345677776543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.75  E-value=0.0023  Score=45.81  Aligned_cols=72  Identities=15%  Similarity=0.091  Sum_probs=49.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc------------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~------------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||....            ...+...+++|+.|+.++.+.
T Consensus        65 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  138 (271)
T 3ek2_A           65 SELVFPCDVADD------AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKA  138 (271)
T ss_dssp             CCCEEECCTTCH------HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred             CcEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHH
Confidence            578999999985      33444433       67999999997532            123456789999999999988


Q ss_pred             HHHHh-ccchhhcccccC
Q psy3446          76 AREIR-QLKLFLRLKTEV   92 (166)
Q Consensus        76 ~~~~~-~~~~~~~~ss~~   92 (166)
                      +.... +...++++||..
T Consensus       139 ~~~~~~~~g~iv~isS~~  156 (271)
T 3ek2_A          139 ALPMLSDDASLLTLSYLG  156 (271)
T ss_dssp             HGGGEEEEEEEEEEECGG
T ss_pred             HHHHhccCceEEEEeccc
Confidence            76532 123456666543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.74  E-value=0.0024  Score=45.00  Aligned_cols=73  Identities=14%  Similarity=0.051  Sum_probs=49.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      +..++.+|++++      +.++.+.         .++|+|||+||....        ...+...+++|+.|+.++.+.+.
T Consensus        43 ~~~~~~~D~~~~------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  116 (236)
T 1ooe_A           43 SNILVDGNKNWT------EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT  116 (236)
T ss_dssp             EEEECCTTSCHH------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeCCCCCH------HHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            457788999884      3333333         378999999996431        12335578899999999998877


Q ss_pred             HHh-ccchhhcccccCc
Q psy3446          78 EIR-QLKLFLRLKTEVP   93 (166)
Q Consensus        78 ~~~-~~~~~~~~ss~~~   93 (166)
                      ... +...++++||...
T Consensus       117 ~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A          117 THLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             HHEEEEEEEEEECCGGG
T ss_pred             HHhccCCEEEEECchhh
Confidence            642 2235667776543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=96.73  E-value=0.0035  Score=45.96  Aligned_cols=49  Identities=10%  Similarity=0.034  Sum_probs=38.7

Q ss_pred             CHHhHHHHhc--cccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         114 SETDRELLRT--NVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       114 s~~~~~~l~~--~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +...++++++  ++|+|||+|+....    ..+...++.+|+.|+.+++++|.+.
T Consensus        43 d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   97 (321)
T 1e6u_A           43 DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN   97 (321)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3456777777  89999999997542    2345678899999999999999875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.72  E-value=0.0063  Score=44.93  Aligned_cols=59  Identities=19%  Similarity=0.140  Sum_probs=42.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ...++++++  ++|+|||+|+.....   ......+.+|+.|+.++++.|++.
T Consensus        51 ~~~~~~~Dl~~------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (338)
T 1udb_A           51 HPTFVEGDIRN------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA  114 (338)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEccCCC------HHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc
Confidence            34567788643      345666654  489999999965432   234567889999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.72  E-value=0.0023  Score=46.17  Aligned_cols=72  Identities=17%  Similarity=0.085  Sum_probs=49.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||....           ...+...+.+|+.|+.++.+.+
T Consensus        57 ~~~~~~~D~~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  130 (275)
T 2pd4_A           57 SPYVYELDVSKE------EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL  130 (275)
T ss_dssp             CCCEEECCTTCH------HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            478999999985      33444433       68999999997532           1234567899999999999887


Q ss_pred             HHHh-ccchhhcccccC
Q psy3446          77 REIR-QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~-~~~~~~~~ss~~   92 (166)
                      .... +...++++||..
T Consensus       131 ~~~~~~~g~iv~isS~~  147 (275)
T 2pd4_A          131 KPLLNNGASVLTLSYLG  147 (275)
T ss_dssp             GGGEEEEEEEEEEECGG
T ss_pred             HHHhccCCEEEEEecch
Confidence            6532 123566676643

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.71  E-value=0.0023  Score=50.43  Aligned_cols=71  Identities=15%  Similarity=0.248  Sum_probs=51.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceee-cc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATV-RF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~-~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +.+..+.+      .+|.|||+|+.. ..       ...+...+.+|+.|+.++.+++...
T Consensus       292 ~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~  365 (496)
T 3mje_A          292 VRVTIAACDAADR------EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL  365 (496)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS
T ss_pred             CeEEEEEccCCCH------HHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            3689999999995      44555544      479999999976 21       1234567899999999999988763


Q ss_pred             hccchhhccccc
Q psy3446          80 RQLKLFLRLKTE   91 (166)
Q Consensus        80 ~~~~~~~~~ss~   91 (166)
                       ....|+.+||.
T Consensus       366 -~~~~iV~~SS~  376 (496)
T 3mje_A          366 -DLDAFVLFSSG  376 (496)
T ss_dssp             -CCSEEEEEEEH
T ss_pred             -CCCEEEEEeCh
Confidence             34567777764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.70  E-value=0.00095  Score=47.54  Aligned_cols=70  Identities=6%  Similarity=-0.001  Sum_probs=48.1

Q ss_pred             EecCCCCCCCCCCHHhHHHHhc----CccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh---ccchhhccccc
Q psy3446          19 VAGDVSLPGLGLSETDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR---QLKLFLRLKTE   91 (166)
Q Consensus        19 ~~gDl~~~~~gl~~~~~~~~~~----~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~---~~~~~~~~ss~   91 (166)
                      +.+|++++      +.++.+.+    ++|++||+||......+++..+++|+.|+.++.+.+....   +..+++++||.
T Consensus        42 ~~~Dl~~~------~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           42 LSTAEGRK------QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             TTSHHHHH------HHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             cccCCCCH------HHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            44555552      34555554    4599999999866345577889999999999998876432   23567788776


Q ss_pred             Ccc
Q psy3446          92 VPH   94 (166)
Q Consensus        92 ~~~   94 (166)
                      ...
T Consensus       116 ~~~  118 (257)
T 1fjh_A          116 ASA  118 (257)
T ss_dssp             GGG
T ss_pred             hhh
Confidence            543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.69  E-value=0.0035  Score=44.97  Aligned_cols=73  Identities=14%  Similarity=0.109  Sum_probs=50.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      +..+.+.+       .+|++||+||....       ...+...+++|+.|+.++.+.+...
T Consensus        63 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  136 (262)
T 3ksu_A           63 AKVALYQSDLSNE------EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKH  136 (262)
T ss_dssp             CEEEEEECCCCSH------HHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence            4689999999985      33444433       68999999997532       1233557889999999999887653


Q ss_pred             h-ccchhhcccccC
Q psy3446          80 R-QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~-~~~~~~~~ss~~   92 (166)
                      . +...++++||..
T Consensus       137 m~~~g~iv~isS~~  150 (262)
T 3ksu_A          137 MNPNGHIITIATSL  150 (262)
T ss_dssp             EEEEEEEEEECCCH
T ss_pred             hcCCCEEEEEechh
Confidence            2 234566666643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.69  E-value=0.0046  Score=49.07  Aligned_cols=73  Identities=14%  Similarity=0.150  Sum_probs=52.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++      +.+..+.+      .+|.|||+|+....       ...+...+.+|+.|+.++.+.+....
T Consensus       315 ~~v~~~~~Dvtd~------~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~  388 (525)
T 3qp9_A          315 ATATVVTCDLTDA------EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAA  388 (525)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CEEEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            3689999999994      44565554      36999999997532       12345678999999999999887643


Q ss_pred             c----cchhhcccccC
Q psy3446          81 Q----LKLFLRLKTEV   92 (166)
Q Consensus        81 ~----~~~~~~~ss~~   92 (166)
                      .    ...|+.+||..
T Consensus       389 ~~~~~~~~iV~~SS~a  404 (525)
T 3qp9_A          389 AAGGRPPVLVLFSSVA  404 (525)
T ss_dssp             ----CCCEEEEEEEGG
T ss_pred             ccCCCCCEEEEECCHH
Confidence            1    34567777653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.69  E-value=0.0036  Score=44.80  Aligned_cols=72  Identities=18%  Similarity=0.081  Sum_probs=49.1

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++.      +++.+.       ..+|++||+|+....           ...+...+++|+.|+.++.+.+
T Consensus        60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  133 (266)
T 3oig_A           60 DSIILPCDVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAA  133 (266)
T ss_dssp             CCEEEECCCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEEeCCCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHH
Confidence            6899999999963      234333       268999999997531           1223457889999999999887


Q ss_pred             HHHh-ccchhhcccccC
Q psy3446          77 REIR-QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~-~~~~~~~~ss~~   92 (166)
                      .... +...++++||..
T Consensus       134 ~~~~~~~g~iv~isS~~  150 (266)
T 3oig_A          134 RPMMTEGGSIVTLTYLG  150 (266)
T ss_dssp             GGGCTTCEEEEEEECGG
T ss_pred             HhhcCCCceEEEEeccc
Confidence            6532 223456666543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.68  E-value=0.0039  Score=46.86  Aligned_cols=59  Identities=12%  Similarity=0.191  Sum_probs=44.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      +...+.+++++  +|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        80 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~  143 (375)
T 1t2a_A           80 NMKLHYGDLT------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC  143 (375)
T ss_dssp             CEEEEECCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CceEEEccCC------CHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence            4567778864      34556666654  69999999976543   345667899999999999999875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.67  E-value=0.0053  Score=44.48  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=48.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch------------hhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD------------EKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~------------~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++      ++.+.+.       ..+|++||+||.....            ..+...+++|+.|+.++.+
T Consensus        51 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  124 (281)
T 3zv4_A           51 GNAVGVVGDVRSL------QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVK  124 (281)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CcEEEEEcCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHH
Confidence            4789999999985      3333332       3689999999975321            1245678899999999988


Q ss_pred             HHHHHh--ccchhhcccccC
Q psy3446          75 LAREIR--QLKLFLRLKTEV   92 (166)
Q Consensus        75 l~~~~~--~~~~~~~~ss~~   92 (166)
                      .+....  ....++++||..
T Consensus       125 ~~~~~~~~~~g~iv~isS~~  144 (281)
T 3zv4_A          125 ACLPALVSSRGSVVFTISNA  144 (281)
T ss_dssp             HHHHHHHHHTCEEEEECCGG
T ss_pred             HHHHHHHhcCCeEEEEecch
Confidence            775432  123456666543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.67  E-value=0.0038  Score=45.83  Aligned_cols=55  Identities=9%  Similarity=0.183  Sum_probs=42.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+...            +.++.++++.+++....++|+
T Consensus        56 ~~v~~v~~D~~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           56 MGVTIIEGEMEEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCcEEEEecCCCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEe
Confidence            4689999999984      557888899999999998643            567888999888743255555

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.66  E-value=0.0034  Score=45.27  Aligned_cols=50  Identities=22%  Similarity=0.325  Sum_probs=39.4

Q ss_pred             CHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         114 SETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       114 s~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +...++++.+  ++|+|||+|+......   +....+.+|+.|+.+++++|++.+
T Consensus        44 d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~   98 (287)
T 3sc6_A           44 NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG   98 (287)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3455666666  5999999999766443   567789999999999999998753

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.65  E-value=0.0046  Score=45.21  Aligned_cols=72  Identities=14%  Similarity=0.035  Sum_probs=49.3

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ++.++.+|++++      +.++.+.+       .+|++||+||....           ...+...+++|+.|+.++.+.+
T Consensus        81 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  154 (296)
T 3k31_A           81 VKLTVPCDVSDA------ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA  154 (296)
T ss_dssp             CCEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            468999999995      33444433       68999999997532           1234568899999999999887


Q ss_pred             HHHh-ccchhhcccccC
Q psy3446          77 REIR-QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~-~~~~~~~~ss~~   92 (166)
                      .... +...++++||..
T Consensus       155 ~~~m~~~g~IV~isS~~  171 (296)
T 3k31_A          155 EPLMTNGGSILTLSYYG  171 (296)
T ss_dssp             GGGCTTCEEEEEEECGG
T ss_pred             HHHhhcCCEEEEEEehh
Confidence            6532 223556666543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.64  E-value=0.0033  Score=45.78  Aligned_cols=55  Identities=15%  Similarity=0.246  Sum_probs=42.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+...            +.++.++++.|++....++|+
T Consensus        56 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           56 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEEeccCCH------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEe
Confidence            4689999999984      457778889999999998642            567788888888743255555

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.63  E-value=0.0047  Score=44.96  Aligned_cols=55  Identities=13%  Similarity=0.193  Sum_probs=41.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+...            +.++.++++.+++....++|+
T Consensus        55 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           55 LGVILLEGDINDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEEeCCCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEe
Confidence            4689999999984      457788889999999999653            456778888887743255554

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.62  E-value=0.0048  Score=44.02  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=49.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH----hc-----Ccc--EEEEcceeec-----c-----hhhHHHHHHhhhhcHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL----RT-----NVN--VIFHGAATVR-----F-----DEKIQLAVAINVLGVRAM   72 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~----~~-----~~d--~Vih~aa~~~-----~-----~~~~~~~~~~nv~gt~~l   72 (166)
                      .++.++.+|++++.      .++.+    .+     .+|  ++||+||...     +     ...+...+++|+.|+.++
T Consensus        60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  133 (259)
T 1oaa_A           60 LKVVLAAADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCL  133 (259)
T ss_dssp             SEEEEEECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHH
T ss_pred             CeEEEEecCCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHH
Confidence            36889999999853      33333    22     457  9999999742     1     133456889999999999


Q ss_pred             HHHHHHHhc-----cchhhcccccCc
Q psy3446          73 LELAREIRQ-----LKLFLRLKTEVP   93 (166)
Q Consensus        73 l~l~~~~~~-----~~~~~~~ss~~~   93 (166)
                      .+.+.....     ...++++||...
T Consensus       134 ~~~~~~~~~~~~~~~g~iv~isS~~~  159 (259)
T 1oaa_A          134 TSGTLNAFQDSPGLSKTVVNISSLCA  159 (259)
T ss_dssp             HHHHHHTSCCCTTCEEEEEEECCGGG
T ss_pred             HHHHHHHHhhccCCCceEEEEcCchh
Confidence            988765421     234667776543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.61  E-value=0.0058  Score=44.22  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=50.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-   79 (166)
                      .++.++.+|++++.-      .+.+.      ..+|++||+|+....       ...+...+++|+.|+.++.+.+... 
T Consensus        82 ~~~~~~~~Dv~~~~~------~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  155 (275)
T 4imr_A           82 GTAQELAGDLSEAGA------GTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKM  155 (275)
T ss_dssp             CCEEEEECCTTSTTH------HHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCCHHH------HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            468999999999642      33332      368999999996432       1234557899999999998876432 


Q ss_pred             --hccchhhcccccCc
Q psy3446          80 --RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 --~~~~~~~~~ss~~~   93 (166)
                        .+...++++||...
T Consensus       156 ~~~~~g~Iv~isS~~~  171 (275)
T 4imr_A          156 VARKWGRVVSIGSINQ  171 (275)
T ss_dssp             HHHTCEEEEEECCGGG
T ss_pred             HhcCCcEEEEECCHHh
Confidence              22345677776543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.59  E-value=0.0034  Score=44.34  Aligned_cols=73  Identities=12%  Similarity=0.005  Sum_probs=49.0

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHh---------cCccEEEEcceeecc-----h---hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLR---------TNVNVIFHGAATVRF-----D---EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~---------~~~d~Vih~aa~~~~-----~---~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      +..++.+|++++      +.++.+.         .++|++||+||....     .   ..+...+++|+.|+..+.+.+.
T Consensus        47 ~~~~~~~D~~~~------~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  120 (241)
T 1dhr_A           47 ASVIVKMTDSFT------EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT  120 (241)
T ss_dssp             EEEECCCCSCHH------HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCCH------HHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            457788999884      3344333         378999999996531     1   2335578899999999988876


Q ss_pred             HHh-ccchhhcccccCc
Q psy3446          78 EIR-QLKLFLRLKTEVP   93 (166)
Q Consensus        78 ~~~-~~~~~~~~ss~~~   93 (166)
                      ... +...++++||...
T Consensus       121 ~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A          121 KHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             HHEEEEEEEEEECCGGG
T ss_pred             HhhccCCEEEEECCHHH
Confidence            642 2245667776543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.58  E-value=0.0045  Score=45.41  Aligned_cols=55  Identities=22%  Similarity=0.225  Sum_probs=42.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~   86 (166)
                      .+++++.+|++++      +.+..+++++|+|||+|+...            +.++.++++.+++....++|+
T Consensus        58 ~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           58 LGAIIVKGELDEH------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEE
T ss_pred             CCCEEEEecCCCH------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEE
Confidence            4689999999984      557888899999999998642            567788889888743255555

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.56  E-value=0.0077  Score=42.85  Aligned_cols=72  Identities=11%  Similarity=0.092  Sum_probs=48.5

Q ss_pred             ceEEEecCC--CCCCCCCCHHhHHHHhc-------CccEEEEcceeec----c----hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          15 KISAVAGDV--SLPGLGLSETDRELLRT-------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        15 ~~~~~~gDl--~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~----~----~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      ++.++.+|+  +++      +..+.+.+       .+|++||+||...    +    ...+...+++|+.|+.++.+.+.
T Consensus        63 ~~~~~~~D~~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  136 (252)
T 3f1l_A           63 QPQWFILDLLTCTS------ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALL  136 (252)
T ss_dssp             CCEEEECCTTTCCH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEecccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            678999999  653      33444333       6899999999742    1    12335678999999999998775


Q ss_pred             HH---hccchhhcccccC
Q psy3446          78 EI---RQLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~~   92 (166)
                      ..   .+...++++||..
T Consensus       137 ~~m~~~~~g~iv~isS~~  154 (252)
T 3f1l_A          137 PLLLKSDAGSLVFTSSSV  154 (252)
T ss_dssp             HHHHTSSSCEEEEECCGG
T ss_pred             HHHHHCCCCEEEEECChh
Confidence            43   1234566776654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=96.56  E-value=0.00053  Score=51.61  Aligned_cols=50  Identities=20%  Similarity=0.063  Sum_probs=40.2

Q ss_pred             CCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         113 LSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       113 ls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .+...++++++++|+|||+|+.... .....++..|+.|+.+++++|++.+
T Consensus        35 ~d~~~l~~~~~~~d~Vih~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~   84 (369)
T 3st7_A           35 TKEEELESALLKADFIVHLAGVNRP-EHDKEFSLGNVSYLDHVLDILTRNT   84 (369)
T ss_dssp             CCHHHHHHHHHHCSEEEECCCSBCT-TCSTTCSSSCCBHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHhccCCEEEECCcCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4567788888899999999997653 3445567889999999999998763

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.54  E-value=0.0028  Score=47.15  Aligned_cols=89  Identities=12%  Similarity=0.113  Sum_probs=57.6

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc--------cceeeeEeecCCCCCCCCCCCH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP--------HFLEKISAVAGDVSLPGLGLSE  115 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~--------~~~~~~~~v~gD~~~~~~gls~  115 (166)
                      .|+-+||++++|..+...+..             ....+..+.+-.+...        ....++..+.+|+.      +.
T Consensus        12 ~IlVtGatG~iG~~l~~~L~~-------------~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~------d~   72 (346)
T 3i6i_A           12 RVLIAGATGFIGQFVATASLD-------------AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN------EQ   72 (346)
T ss_dssp             CEEEECTTSHHHHHHHHHHHH-------------TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT------CH
T ss_pred             eEEEECCCcHHHHHHHHHHHH-------------CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC------CH
Confidence            588899999988887543321             1111222222110000        01135667888874      35


Q ss_pred             HhHHHHhc--cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         116 TDRELLRT--NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       116 ~~~~~l~~--~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ..+.++++  ++|+|||+|+..            |+.|+.+++++|++.+
T Consensus        73 ~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           73 EAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVG  110 (346)
T ss_dssp             HHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHC
T ss_pred             HHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcC
Confidence            67788888  999999999862            8999999999998765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.54  E-value=0.0046  Score=44.70  Aligned_cols=88  Identities=19%  Similarity=0.164  Sum_probs=57.8

Q ss_pred             ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          42 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      ...|+-+||++++|..+...+.             +++..+..+.+  +            .+|+.      +...++++
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~-------------~~g~~V~~~~r--~------------~~Dl~------d~~~~~~~   58 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLK-------------GKNVEVIPTDV--Q------------DLDIT------NVLAVNKF   58 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHT-------------TSSEEEEEECT--T------------TCCTT------CHHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHH-------------hCCCeEEeccC--c------------cCCCC------CHHHHHHH
Confidence            4678899999988887644321             11111111111  0            35543      34556676


Q ss_pred             hc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         122 RT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       122 ~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++  ++|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~  104 (292)
T 1vl0_A           59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV  104 (292)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            66  699999999976532   346678899999999999999875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.53  E-value=0.0035  Score=42.74  Aligned_cols=56  Identities=14%  Similarity=0.116  Sum_probs=41.6

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.      +...++++.+++|+|||+|+......    ...+|+.|+.+++++|++.
T Consensus        46 ~~~~~~~~D~~------~~~~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~~  101 (206)
T 1hdo_A           46 RPAHVVVGDVL------QAADVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKAH  101 (206)
T ss_dssp             CCSEEEESCTT------SHHHHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCC------CHHHHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHHh
Confidence            35667778864      34567788889999999998654311    1347999999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=96.51  E-value=0.012  Score=43.67  Aligned_cols=97  Identities=16%  Similarity=0.130  Sum_probs=59.3

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC----c--cceeeeEeecCCCCCCCCCCCHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV----P--HFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~----~--~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      -.|+-+||++++|..+...+..             ++..+..+.+.....    .  ....++..+.+|+.++.      
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~-------------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------   88 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMM-------------DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------   88 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-------------TTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------
T ss_pred             CEEEEEcCccHHHHHHHHHHHH-------------CCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------
Confidence            4688899999888887543321             111111111110000    0  01234567778876543      


Q ss_pred             hHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         117 DRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       117 ~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                           ..++|+|||+|+.....   ......+.+|+.|+.+++++|.+.+
T Consensus        89 -----~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  133 (343)
T 2b69_A           89 -----YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG  133 (343)
T ss_dssp             -----CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence                 24689999999975432   2456678899999999999998753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.51  E-value=0.01  Score=42.67  Aligned_cols=71  Identities=13%  Similarity=0.134  Sum_probs=47.1

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH---
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI---   79 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---   79 (166)
                      ..+.+|++++.      ....+.       .++|++||+||....       ...+...+++|+.|+.++.+.+...   
T Consensus        69 ~~~~~Dv~~~~------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  142 (266)
T 3uxy_A           69 LHLPGDLREAA------YADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA  142 (266)
T ss_dssp             EECCCCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             hccCcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            45678888742      233332       378999999997642       2234567889999999999887432   


Q ss_pred             hccchhhcccccCc
Q psy3446          80 RQLKLFLRLKTEVP   93 (166)
Q Consensus        80 ~~~~~~~~~ss~~~   93 (166)
                      .+...++++||...
T Consensus       143 ~~~g~iv~isS~~~  156 (266)
T 3uxy_A          143 AGGGAIVNVASCWG  156 (266)
T ss_dssp             HTCEEEEEECCSBT
T ss_pred             cCCcEEEEECCHHh
Confidence            23456777777544

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=96.50  E-value=0.0047  Score=45.07  Aligned_cols=97  Identities=14%  Similarity=0.036  Sum_probs=57.7

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-cceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-HFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      |+-+||++++|.++...+             ++++..+..+.+.++... ....++..+.+|+.++.       +.++.+
T Consensus         3 vlVtGatG~iG~~l~~~L-------------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-------~~~~~~   62 (312)
T 3ko8_A            3 IVVTGGAGFIGSHLVDKL-------------VELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-------WGAGIK   62 (312)
T ss_dssp             EEEETTTSHHHHHHHHHH-------------HHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-------TTTTCC
T ss_pred             EEEECCCChHHHHHHHHH-------------HhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-------HHhhcC
Confidence            677888887777764322             222222222222221111 11235567788876543       223344


Q ss_pred             cccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      + |+|||+|+....   .......+.+|+.|+.++++.|++.
T Consensus        63 ~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  103 (312)
T 3ko8_A           63 G-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT  103 (312)
T ss_dssp             C-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4 999999995322   2345667889999999999999875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=96.48  E-value=0.0083  Score=49.01  Aligned_cols=59  Identities=19%  Similarity=0.155  Sum_probs=43.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ...++++++  ++|+|||+|+.....   ......+.+|+.|+.+++++|++.
T Consensus        62 ~v~~v~~Dl~d------~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~  125 (699)
T 1z45_A           62 HIPFYEVDLCD------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY  125 (699)
T ss_dssp             CCCEEECCTTC------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            45567788643      455666666  799999999975532   234567899999999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.46  E-value=0.0088  Score=43.39  Aligned_cols=64  Identities=9%  Similarity=0.082  Sum_probs=42.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc---------h--------hhHHHHHHhhhhcH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF---------D--------EKIQLAVAINVLGV   69 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~---------~--------~~~~~~~~~nv~gt   69 (166)
                      .++.++.+|++++..  .++.++.+.       ..+|++||+||....         .        ..+...+.+|+.|+
T Consensus        74 ~~~~~~~~Dv~~~~~--~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~  151 (288)
T 2x9g_A           74 NTAVVCQADLTNSNV--LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP  151 (288)
T ss_dssp             TCEEEEECCCSCSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHH
T ss_pred             CceEEEEeecCCccC--CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHH
Confidence            468899999998321  012233333       378999999997531         1        12345788999999


Q ss_pred             HHHHHHHHHH
Q psy3446          70 RAMLELAREI   79 (166)
Q Consensus        70 ~~ll~l~~~~   79 (166)
                      ..+.+.+...
T Consensus       152 ~~l~~~~~~~  161 (288)
T 2x9g_A          152 FLLTMSFAQR  161 (288)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9988877543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.44  E-value=0.00059  Score=49.43  Aligned_cols=58  Identities=14%  Similarity=0.097  Sum_probs=38.7

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhcc-ccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTN-VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~-~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++      ..++++.++ +|+|||+|+..  .......+.+|+.|+.+++++|++.
T Consensus        41 ~~~~~~~~Dl~d~------~~~~~~~~~~~d~vih~a~~~--~~~~~~~~~~n~~~~~~ll~a~~~~   99 (286)
T 3gpi_A           41 AGVQTLIADVTRP------DTLASIVHLRPEILVYCVAAS--EYSDEHYRLSYVEGLRNTLSALEGA   99 (286)
T ss_dssp             TTCCEEECCTTCG------GGCTTGGGGCCSEEEECHHHH--HHC-----CCSHHHHHHHHHHTTTS
T ss_pred             cCCceEEccCCCh------HHHHHhhcCCCCEEEEeCCCC--CCCHHHHHHHHHHHHHHHHHHHhhC
Confidence            4566778887543      234445555 99999999863  2445667889999999999999753

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.39  E-value=0.0068  Score=42.73  Aligned_cols=75  Identities=11%  Similarity=-0.021  Sum_probs=49.5

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH---hcc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI---RQL   82 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---~~~   82 (166)
                      +.++.+|+++...   ....+.+   ..++|++||+|+....       ...+...+.+|+.|+.++.+.+...   .+.
T Consensus        45 ~~~~~~D~~~~~~---~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~  121 (239)
T 2ekp_A           45 AVPLPTDLEKDDP---KGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGW  121 (239)
T ss_dssp             CEEEECCTTTSCH---HHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             cEEEecCCchHHH---HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            7789999998321   1222222   3479999999997532       1234567899999999988876432   234


Q ss_pred             chhhcccccCc
Q psy3446          83 KLFLRLKTEVP   93 (166)
Q Consensus        83 ~~~~~~ss~~~   93 (166)
                      ..++++||...
T Consensus       122 g~iv~isS~~~  132 (239)
T 2ekp_A          122 GRVLFIGSVTT  132 (239)
T ss_dssp             EEEEEECCGGG
T ss_pred             cEEEEECchhh
Confidence            56777777654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=96.32  E-value=0.0038  Score=45.24  Aligned_cols=55  Identities=27%  Similarity=0.297  Sum_probs=41.3

Q ss_pred             ecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         102 VAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       102 v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +.+|+.      +...+.+++++  +|+|||+|+.....   ......+.+|+.|+.+++++|++.
T Consensus        36 ~~~D~~------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~   95 (299)
T 1n2s_A           36 FCGDFS------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET   95 (299)
T ss_dssp             SCCCTT------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT
T ss_pred             ccccCC------CHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            456653      34556677665  99999999975532   346678899999999999999764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=96.28  E-value=0.0069  Score=43.23  Aligned_cols=55  Identities=24%  Similarity=0.205  Sum_probs=41.6

Q ss_pred             ecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         102 VAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       102 v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +.+|+.      +...++++.++  +|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        39 ~~~Dl~------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   98 (273)
T 2ggs_A           39 YKLDLT------DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI   98 (273)
T ss_dssp             EECCTT------SHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             ceeccC------CHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh
Confidence            556753      34556776665  99999999976543   356678899999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.25  E-value=0.011  Score=46.01  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=49.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhc--------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRT--------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~--------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      +++++.+|++++.-      .+.+.+        .+|+|||+|+.....       ..+...+.+|+.|+.++.+.+...
T Consensus       260 ~~~~~~~Dvtd~~~------v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~  333 (454)
T 3u0b_A          260 GGTALTLDVTADDA------VDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN  333 (454)
T ss_dssp             TCEEEECCTTSTTH------HHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCeEEEEecCCHHH------HHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            46789999999752      333222        399999999976421       234567899999999999988763


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   ....++++||..
T Consensus       334 ~~~~~~g~iV~iSS~a  349 (454)
T 3u0b_A          334 GTIGEGGRVIGLSSMA  349 (454)
T ss_dssp             TSSCTTCEEEEECCHH
T ss_pred             hhhcCCCEEEEEeChH
Confidence            2   234566777643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.25  E-value=0.0092  Score=44.61  Aligned_cols=59  Identities=17%  Similarity=0.268  Sum_probs=43.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      +...+++++++  +|+|||+|+.....   ......+.+|+.|+.++++.|.+.
T Consensus        56 ~~~~~~~Dl~------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  119 (372)
T 1db3_A           56 KFHLHYGDLS------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL  119 (372)
T ss_dssp             CEEECCCCSS------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             ceEEEECCCC------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence            5566778864      34556666654  69999999965432   234567889999999999999875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.24  E-value=0.022  Score=41.02  Aligned_cols=54  Identities=9%  Similarity=0.017  Sum_probs=41.8

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++..+.+|+.      ++..++++++++|+|||+|+.....       ..|+.++.+++++|++..
T Consensus        44 ~~v~~~~~D~~------d~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~g   97 (289)
T 3e48_A           44 GKVSVRQLDYF------NQESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQSG   97 (289)
T ss_dssp             TTBEEEECCTT------CHHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEcCCC------CHHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHcC
Confidence            35667888874      4567888889999999999865432       238999999999998753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.18  E-value=0.013  Score=41.23  Aligned_cols=73  Identities=12%  Similarity=0.085  Sum_probs=47.7

Q ss_pred             cceEEEecCC--CCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHH
Q psy3446          14 EKISAVAGDV--SLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        14 ~~~~~~~gDl--~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~   76 (166)
                      .++.++.+|+  +++      +.+..+.       ..+|++||+||....        ...+...+++|+.|+.++.+.+
T Consensus        64 ~~~~~~~~d~d~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  137 (247)
T 3i1j_A           64 PQPLIIALNLENATA------QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL  137 (247)
T ss_dssp             CCCEEEECCTTTCCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCceEEEeccccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            4567888887  553      3344333       378999999997422        1234567899999999999877


Q ss_pred             HHHh---ccchhhcccccC
Q psy3446          77 REIR---QLKLFLRLKTEV   92 (166)
Q Consensus        77 ~~~~---~~~~~~~~ss~~   92 (166)
                      ....   +...++++||..
T Consensus       138 ~~~~~~~~~~~iv~isS~~  156 (247)
T 3i1j_A          138 LPLLKRSEDASIAFTSSSV  156 (247)
T ss_dssp             HHHHTTSSSEEEEEECCGG
T ss_pred             HHHHHhCCCCeEEEEcchh
Confidence            5432   234566666644

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.14  E-value=0.014  Score=42.08  Aligned_cols=60  Identities=7%  Similarity=-0.015  Sum_probs=41.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcce-eecch------------hhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAA-TVRFD------------EKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa-~~~~~------------~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++      +.++.+.+      .+|++||+|| .....            ..+...+++|+.|+.++.+
T Consensus        76 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  149 (281)
T 3ppi_A           76 NRAEFVSTNVTSE------DSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVAR  149 (281)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CceEEEEcCCCCH------HHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            4689999999985      33444433      5799999944 32211            1246688999999999988


Q ss_pred             HHHHH
Q psy3446          75 LAREI   79 (166)
Q Consensus        75 l~~~~   79 (166)
                      .+...
T Consensus       150 ~~~~~  154 (281)
T 3ppi_A          150 LVAAS  154 (281)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77643

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=96.02  E-value=0.0089  Score=43.42  Aligned_cols=48  Identities=17%  Similarity=0.074  Sum_probs=37.4

Q ss_pred             HhHHHHhcc-----ccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         116 TDRELLRTN-----VNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       116 ~~~~~l~~~-----~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ...+++.++     +|+|||+|+.... ..+....+.+|+.|+.+++++|.+.+
T Consensus        55 ~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  108 (310)
T 1eq2_A           55 DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE  108 (310)
T ss_dssp             HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            446666654     9999999997543 23567788999999999999998753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.00  E-value=0.0094  Score=42.23  Aligned_cols=73  Identities=8%  Similarity=0.063  Sum_probs=48.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-------------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-------------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAML   73 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-------------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll   73 (166)
                      .++.++.+|++++.      ..+.+.+             .+|++||+||.....       ..+...+++|+.|+.++.
T Consensus        57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  130 (255)
T 3icc_A           57 GSAFSIGANLESLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFII  130 (255)
T ss_dssp             CEEEEEECCTTSHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CceEEEecCcCCHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHH
Confidence            46889999999853      2333322             289999999975321       223557889999999999


Q ss_pred             HHHHHHh-ccchhhcccccC
Q psy3446          74 ELAREIR-QLKLFLRLKTEV   92 (166)
Q Consensus        74 ~l~~~~~-~~~~~~~~ss~~   92 (166)
                      +.+.... +...++++||..
T Consensus       131 ~~~~~~~~~~~~iv~isS~~  150 (255)
T 3icc_A          131 QQALSRLRDNSRIINISSAA  150 (255)
T ss_dssp             HHHTTTEEEEEEEEEECCGG
T ss_pred             HHHHHhhCCCCEEEEeCChh
Confidence            8876531 233566666643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.00  E-value=0.0035  Score=44.09  Aligned_cols=59  Identities=10%  Similarity=0.145  Sum_probs=42.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchH----------H------HHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE----------K------IQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~----------~------~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.      +...++++.+++|+|||+|+......          +      ....+.+|+.|+.++++.|++
T Consensus        49 ~~~~~~~D~~------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  122 (253)
T 1xq6_A           49 EADVFIGDIT------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV  122 (253)
T ss_dssp             CTTEEECCTT------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH
T ss_pred             CeeEEEecCC------CHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH
Confidence            3445677764      34678888889999999998643211          1      123578899999999999987


Q ss_pred             h
Q psy3446         162 I  162 (166)
Q Consensus       162 ~  162 (166)
                      .
T Consensus       123 ~  123 (253)
T 1xq6_A          123 A  123 (253)
T ss_dssp             H
T ss_pred             c
Confidence            5

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.88  E-value=0.033  Score=38.87  Aligned_cols=59  Identities=24%  Similarity=0.262  Sum_probs=42.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc------cccEEEEccccccch-----------HHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRFD-----------EKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~------~~d~i~h~aa~~~~~-----------~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+.+|+.+      ...++++++      .+|+++|+|+.....           ......+.+|+.|+.++++.+.
T Consensus        40 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  113 (242)
T 1uay_A           40 DLIYVEGDVTR------EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA  113 (242)
T ss_dssp             SSEEEECCTTC------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEeCCCCC------HHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHH
Confidence            44567788743      344555554      689999999864321           1567788999999999999887


Q ss_pred             Hh
Q psy3446         161 EI  162 (166)
Q Consensus       161 ~~  162 (166)
                      ..
T Consensus       114 ~~  115 (242)
T 1uay_A          114 WA  115 (242)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.82  E-value=0.026  Score=40.53  Aligned_cols=52  Identities=12%  Similarity=0.185  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.++.+|+.      ++..+.++++++|+|||+|+.. ..      ..+|+.|+.+++++|++.
T Consensus        46 ~~~~~~~D~~------d~~~l~~~~~~~d~vi~~a~~~-~~------~~~n~~~~~~l~~a~~~~   97 (287)
T 2jl1_A           46 GVEVRHGDYN------QPESLQKAFAGVSKLLFISGPH-YD------NTLLIVQHANVVKAARDA   97 (287)
T ss_dssp             TCEEEECCTT------CHHHHHHHTTTCSEEEECCCCC-SC------HHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEeccC------CHHHHHHHHhcCCEEEEcCCCC-cC------chHHHHHHHHHHHHHHHc
Confidence            4556778874      3466788888999999999852 22      157999999999999875

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.82  E-value=0.01  Score=41.76  Aligned_cols=47  Identities=23%  Similarity=0.185  Sum_probs=36.5

Q ss_pred             HhHHHHhc----cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         116 TDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       116 ~~~~~l~~----~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ...+++++    .+|+|||+|+......+....+.+|+.|+.++++.+...
T Consensus        50 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  100 (255)
T 2dkn_A           50 TAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEA  100 (255)
T ss_dssp             HHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHH
Confidence            34555554    799999999975534567788999999999999988764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.81  E-value=0.012  Score=43.83  Aligned_cols=48  Identities=17%  Similarity=0.086  Sum_probs=37.3

Q ss_pred             HhHHHHhc-----cccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         116 TDRELLRT-----NVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       116 ~~~~~l~~-----~~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ..++.+.+     ++|+|||+|+.... ..+...++.+|+.|+.+++++|.+.+
T Consensus       102 ~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~  155 (357)
T 2x6t_A          102 DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE  155 (357)
T ss_dssp             HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            44566665     59999999997543 23567789999999999999998753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.77  E-value=0.1  Score=37.25  Aligned_cols=97  Identities=16%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ..|+-+||..++|..+-..             +++++..+....  .+.......++..+.+|+++      +.+.++++
T Consensus        29 k~vlVTGas~gIG~aia~~-------------l~~~G~~V~~~~--r~~~~~~~~~~~~~~~Dv~d------~~~v~~~~   87 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRA-------------YRDRNYRVVATS--RSIKPSADPDIHTVAGDISK------PETADRIV   87 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHH-------------HHHTTCEEEEEE--SSCCCCSSTTEEEEESCTTS------HHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHH-------------HHHCCCEEEEEe--CChhhcccCceEEEEccCCC------HHHHHHHH
Confidence            5788899988877765432             223322221111  11111112356677888754      34445444


Q ss_pred             c-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 T-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       123 ~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +       .+|+++|+|+....       .......+.+|+.|+..+++.+.
T Consensus        88 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  139 (260)
T 3un1_A           88 REGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAA  139 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            3       78999999986421       23456678899999999998774

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.74  E-value=0.049  Score=38.56  Aligned_cols=73  Identities=10%  Similarity=-0.022  Sum_probs=44.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hccch
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQLKL   84 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~~~~   84 (166)
                      ++.++ +|+ ...    .+.+.+...++|+|||+||.....       ..+...+++|+.|+.++.+.+...   .+...
T Consensus        61 ~~~~~-~D~-~~~----~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  134 (249)
T 1o5i_A           61 HRYVV-CDL-RKD----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR  134 (249)
T ss_dssp             SEEEE-CCT-TTC----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             CeEEE-eeH-HHH----HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence            56677 999 222    122222223789999999965422       234567889999987776544321   23356


Q ss_pred             hhcccccCc
Q psy3446          85 FLRLKTEVP   93 (166)
Q Consensus        85 ~~~~ss~~~   93 (166)
                      ++++||...
T Consensus       135 iv~isS~~~  143 (249)
T 1o5i_A          135 IVAITSFSV  143 (249)
T ss_dssp             EEEECCGGG
T ss_pred             EEEEcchHh
Confidence            778777654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=95.71  E-value=0.017  Score=40.25  Aligned_cols=66  Identities=9%  Similarity=-0.094  Sum_probs=43.6

Q ss_pred             cCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhhcc
Q psy3446          21 GDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREIR-QLKLFLRL   88 (166)
Q Consensus        21 gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~   88 (166)
                      +|++++      +.++.+.+   ++|++||+||....        ...+...+++|+.|+.++.+.+.... +...++++
T Consensus        42 ~D~~~~------~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~  115 (223)
T 3uce_A           42 LDISDE------KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT  115 (223)
T ss_dssp             CCTTCH------HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCCCH------HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence            677774      34555543   68999999997521        22345578999999999998876532 22346666


Q ss_pred             cccC
Q psy3446          89 KTEV   92 (166)
Q Consensus        89 ss~~   92 (166)
                      ||..
T Consensus       116 sS~~  119 (223)
T 3uce_A          116 SGML  119 (223)
T ss_dssp             CCGG
T ss_pred             cchh
Confidence            6543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.52  E-value=0.022  Score=40.44  Aligned_cols=71  Identities=11%  Similarity=0.037  Sum_probs=46.7

Q ss_pred             EEEecCCCCCCCCCCHHhHHHHhc-------CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHHHHh-
Q psy3446          17 SAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAREIR-   80 (166)
Q Consensus        17 ~~~~gDl~~~~~gl~~~~~~~~~~-------~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~~~~-   80 (166)
                      ..+..|++++      ++++.+.+       .+|+|||+||....        ...+...+++|+.|+.++.+.+.... 
T Consensus        62 ~~~~~d~~d~------~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  135 (251)
T 3orf_A           62 HSFTIKDSGE------EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLN  135 (251)
T ss_dssp             EEEECSCSSH------HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred             cceEEEeCCH------HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence            3567777764      33444433       46999999996421        22335578899999999999887643 


Q ss_pred             ccchhhcccccCc
Q psy3446          81 QLKLFLRLKTEVP   93 (166)
Q Consensus        81 ~~~~~~~~ss~~~   93 (166)
                      +...++++||...
T Consensus       136 ~~g~iv~isS~~~  148 (251)
T 3orf_A          136 QGGLFVLTGASAA  148 (251)
T ss_dssp             EEEEEEEECCGGG
T ss_pred             cCCEEEEEechhh
Confidence            2235677776543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=95.52  E-value=0.06  Score=38.32  Aligned_cols=72  Identities=15%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---cCccEEEEcceeecch-----hhHHHHHHhhhhcHHHHHHHHHHHh--ccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD-----EKIQLAVAINVLGVRAMLELAREIR--QLK   83 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~~~d~Vih~aa~~~~~-----~~~~~~~~~nv~gt~~ll~l~~~~~--~~~   83 (166)
                      .++..+.+|++++      ++++++.   .++|+++|+|+...-.     ..++..+++|+.|+..+.+.+....  +.-
T Consensus        54 ~~~~~~~~Dv~~~------~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G  127 (242)
T 4b79_A           54 PRIRREELDITDS------QRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGG  127 (242)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCE
T ss_pred             CCeEEEEecCCCH------HHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            4789999999985      3455544   4689999999975321     2345688999999988877665432  123


Q ss_pred             hhhccccc
Q psy3446          84 LFLRLKTE   91 (166)
Q Consensus        84 ~~~~~ss~   91 (166)
                      .++++||.
T Consensus       128 ~IVnisS~  135 (242)
T 4b79_A          128 SILNIASM  135 (242)
T ss_dssp             EEEEECCG
T ss_pred             eEEEEeec
Confidence            46666664

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.51  E-value=0.0064  Score=44.44  Aligned_cols=56  Identities=20%  Similarity=0.104  Sum_probs=23.8

Q ss_pred             eecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         101 AVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       101 ~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .+.+|+.++      ..+.++++  .+|+|||+|+.....   .+....+.+|+.|+.+++++|.+.
T Consensus        41 ~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~  101 (315)
T 2ydy_A           41 FEQVNLLDS------NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV  101 (315)
T ss_dssp             -----------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH
T ss_pred             eEEecCCCH------HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            456776543      22444444  489999999975432   345668899999999999999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=95.47  E-value=0.0054  Score=42.31  Aligned_cols=52  Identities=12%  Similarity=0.080  Sum_probs=38.5

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.++..        +.+.++|+|||+|+....      ....|+.|+.++++.|++.
T Consensus        42 ~~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~   93 (221)
T 3ew7_A           42 KDINILQKDIFDLTL--------SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT   93 (221)
T ss_dssp             SSSEEEECCGGGCCH--------HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC
T ss_pred             CCCeEEeccccChhh--------hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc
Confidence            356678888765532        445789999999987321      2456999999999999775

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=95.45  E-value=0.022  Score=42.24  Aligned_cols=45  Identities=9%  Similarity=-0.059  Sum_probs=36.1

Q ss_pred             HHHHhccccEEEEcccccc-chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         118 RELLRTNVNVIFHGAATVR-FDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       118 ~~~l~~~~d~i~h~aa~~~-~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ..+.++++|+|+|+|+... .+.+...+...|+.|+.++++.+.+.
T Consensus        74 ~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~  119 (327)
T 1y7t_A           74 PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV  119 (327)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            3455678999999999654 23455678999999999999999885

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.45  E-value=0.041  Score=39.09  Aligned_cols=59  Identities=14%  Similarity=0.116  Sum_probs=41.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+..|+++      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+...
T Consensus        55 ~~~~~~~Dl~~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  127 (276)
T 1wma_A           55 SPRFHQLDIDD------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL  127 (276)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             eeEEEECCCCC------HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence            45567788753      334444443       78999999986421       3456678999999999999988654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.43  E-value=0.067  Score=37.65  Aligned_cols=58  Identities=17%  Similarity=0.186  Sum_probs=40.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.+      ....+++++       .+|++||+|+....      .......+.+|+.|+.++++.+..
T Consensus        61 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  131 (255)
T 1fmc_A           61 QAFACRCDITS------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAP  131 (255)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45566788743      344555543       79999999996432      234566889999999999988753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=95.40  E-value=0.056  Score=38.74  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=49.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec----ch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR----FD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~----~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++.+.+.       ..+|+++|+||...    +.    ..++..+++|+.|+.++.+.+..
T Consensus        56 ~~~~~~~~Dvt~~------~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p  129 (254)
T 4fn4_A           56 KEVLGVKADVSKK------KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP  129 (254)
T ss_dssp             CCEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4689999999995      3344332       36899999999542    21    23456889999999988876654


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+.-.++++||..
T Consensus       130 ~m~~~~~G~IVnisS~~  146 (254)
T 4fn4_A          130 IMLKQGKGVIVNTASIA  146 (254)
T ss_dssp             HHHHHTCEEEEEECCGG
T ss_pred             HHHHcCCcEEEEEechh
Confidence            3   1234566776643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=95.37  E-value=0.084  Score=37.67  Aligned_cols=72  Identities=13%  Similarity=0.182  Sum_probs=48.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +.+.+       ..++|+++|+|+.....       ..++..+++|+.|+..+.+.+...
T Consensus        47 ~~~~~~~~Dv~~~~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~  120 (247)
T 3ged_A           47 PNLFYFHGDVADPL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDE  120 (247)
T ss_dssp             TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            46889999999953      34333       23689999999875422       234568899999999888776543


Q ss_pred             h--ccchhhccccc
Q psy3446          80 R--QLKLFLRLKTE   91 (166)
Q Consensus        80 ~--~~~~~~~~ss~   91 (166)
                      .  ..-.++.+||.
T Consensus       121 m~~~~G~IInisS~  134 (247)
T 3ged_A          121 LIKNKGRIINIAST  134 (247)
T ss_dssp             HHHTTCEEEEECCG
T ss_pred             HhhcCCcEEEEeec
Confidence            1  22345566554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.24  E-value=0.032  Score=39.71  Aligned_cols=73  Identities=12%  Similarity=0.082  Sum_probs=46.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH--------hcCccEEEEcce--ee--------cc----hhhHHHHHHhhhhcHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL--------RTNVNVIFHGAA--TV--------RF----DEKIQLAVAINVLGVRA   71 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~--------~~~~d~Vih~aa--~~--------~~----~~~~~~~~~~nv~gt~~   71 (166)
                      .++.++.+|++++.      .++.+        ...+|++||+|+  ..        .+    ...+...+.+|+.|+..
T Consensus        54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  127 (260)
T 2qq5_A           54 GQCVPVVCDSSQES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYF  127 (260)
T ss_dssp             SEEEEEECCTTSHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHH
T ss_pred             CceEEEECCCCCHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHH
Confidence            36889999999853      23332        235799999994  21        11    12345678899999988


Q ss_pred             HHHHHHHHh---ccchhhcccccC
Q psy3446          72 MLELAREIR---QLKLFLRLKTEV   92 (166)
Q Consensus        72 ll~l~~~~~---~~~~~~~~ss~~   92 (166)
                      +.+.+....   +...++++||..
T Consensus       128 ~~~~~~~~~~~~~~g~iv~isS~~  151 (260)
T 2qq5_A          128 CSVYGARLMVPAGQGLIVVISSPG  151 (260)
T ss_dssp             HHHHHHHHHGGGTCCEEEEECCGG
T ss_pred             HHHHHHHHHhhcCCcEEEEEcChh
Confidence            777654321   224566777654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.21  E-value=0.082  Score=36.95  Aligned_cols=58  Identities=24%  Similarity=0.333  Sum_probs=41.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+....       ...+...+.+|+.|+.++++.+..
T Consensus        52 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  123 (244)
T 1edo_A           52 QAITFGGDVSK------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK  123 (244)
T ss_dssp             EEEEEECCTTS------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEeCCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45667788753      344555543       68999999996432       134566889999999999888865

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.16  E-value=0.0096  Score=40.87  Aligned_cols=95  Identities=13%  Similarity=-0.049  Sum_probs=55.7

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh--ccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR--QLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~--~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      .|+-+||++++|..+...+.             ++..  .+..+.+-...   ...++.++.+|+.++      ..++++
T Consensus         7 ~vlVtGatG~iG~~l~~~l~-------------~~g~~~~V~~~~r~~~~---~~~~~~~~~~D~~~~------~~~~~~   64 (215)
T 2a35_A            7 RVLLAGATGLTGEHLLDRIL-------------SEPTLAKVIAPARKALA---EHPRLDNPVGPLAEL------LPQLDG   64 (215)
T ss_dssp             EEEEECTTSHHHHHHHHHHH-------------HCTTCCEEECCBSSCCC---CCTTEECCBSCHHHH------GGGCCS
T ss_pred             eEEEECCCcHHHHHHHHHHH-------------hCCCCCeEEEEeCCCcc---cCCCceEEeccccCH------HHHHHh
Confidence            57788888888777644321             1111  11111111110   123455666665332      122223


Q ss_pred             hccccEEEEccccccc-hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         122 RTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       122 ~~~~d~i~h~aa~~~~-~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .  +|+|||+|+.... ..+...++.+|+.|+.+++++|++.
T Consensus        65 ~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (215)
T 2a35_A           65 S--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM  104 (215)
T ss_dssp             C--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             h--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc
Confidence            3  8999999986543 2356678899999999999999875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.10  E-value=0.0028  Score=43.98  Aligned_cols=53  Identities=6%  Similarity=-0.049  Sum_probs=38.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.++..        +...++|+|||+|+.....    .....|+.|+.+++++|++.
T Consensus        44 ~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~~----~~~~~n~~~~~~l~~a~~~~   96 (224)
T 3h2s_A           44 TVATLVKEPLVLTE--------ADLDSVDAVVDALSVPWGS----GRGYLHLDFATHLVSLLRNS   96 (224)
T ss_dssp             TSEEEECCGGGCCH--------HHHTTCSEEEECCCCCTTS----SCTHHHHHHHHHHHHTCTTC
T ss_pred             CceEEecccccccH--------hhcccCCEEEECCccCCCc----chhhHHHHHHHHHHHHHHHc
Confidence            56678889866542        4557899999999875111    12467999999999998764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.05  E-value=0.076  Score=37.11  Aligned_cols=58  Identities=9%  Similarity=0.188  Sum_probs=40.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc---------cccEEEEcccccc-c-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT---------NVNVIFHGAATVR-F-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~---------~~d~i~h~aa~~~-~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+++      ....+++++         .+|++||+|+... .       .......+.+|+.|+..+++.+.
T Consensus        52 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  125 (250)
T 1yo6_A           52 RVHVLPLTVTC------DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             ceEEEEeecCC------HHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            55677788753      233444443         7999999998654 1       23456688999999999988775


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       126 ~  126 (250)
T 1yo6_A          126 P  126 (250)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.04  E-value=0.0055  Score=48.11  Aligned_cols=59  Identities=34%  Similarity=0.455  Sum_probs=42.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc------ccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN------VNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~------~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+++      ...+++++++      +|.|||+|+....       .......+.+|+.|+.++.+++...
T Consensus       280 ~v~~~~~Dv~d------~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~  351 (486)
T 2fr1_A          280 RTTVAACDVTD------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL  351 (486)
T ss_dssp             EEEEEECCTTC------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             EEEEEEeCCCC------HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            56677788753      4556666655      4999999996432       1245567788999999999988654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.00  E-value=0.094  Score=37.46  Aligned_cols=96  Identities=13%  Similarity=0.105  Sum_probs=57.1

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ..|+-+||..++|..+-.             .+++++..+....+-..    ...++..+..|+++      ....++++
T Consensus         9 k~vlVTGas~gIG~~ia~-------------~l~~~G~~V~~~~r~~~----~~~~~~~~~~Dl~~------~~~v~~~~   65 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAE-------------RFVDEGSKVIDLSIHDP----GEAKYDHIECDVTN------PDQVKASI   65 (264)
T ss_dssp             CEEEEESCSSHHHHHHHH-------------HHHHTTCEEEEEESSCC----CSCSSEEEECCTTC------HHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHH-------------HHHHCCCEEEEEecCcc----cCCceEEEEecCCC------HHHHHHHH
Confidence            367888888877776533             22232222111111111    02345667788743      33444444


Q ss_pred             c-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 T-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        66 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  118 (264)
T 2dtx_A           66 DHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIP  118 (264)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3       68999999996432       234666889999999999888765

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=94.95  E-value=0.1  Score=37.44  Aligned_cols=73  Identities=15%  Similarity=0.017  Sum_probs=49.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.       .++|+++|+|+....       ...++..+++|+.|+..+.+.+-..
T Consensus        58 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~  131 (255)
T 4g81_D           58 YDAHGVAFDVTDE------LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR  131 (255)
T ss_dssp             CCEEECCCCTTCH------HHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeeCCCH------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4688999999995      3343332       258999999997542       2234568899999999888765432


Q ss_pred             h----ccchhhcccccC
Q psy3446          80 R----QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~----~~~~~~~~ss~~   92 (166)
                      .    ....++++||..
T Consensus       132 m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D          132 MIARNSGGKIINIGSLT  148 (255)
T ss_dssp             HHHHTCCEEEEEECCGG
T ss_pred             HHHccCCCEEEEEeehh
Confidence            1    223566776654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=94.93  E-value=0.1  Score=36.90  Aligned_cols=59  Identities=20%  Similarity=0.213  Sum_probs=41.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------------hHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------------DEKIQLAVAINVLGVRAMLE  157 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------------~~~~~~~~~~Nv~G~~~~l~  157 (166)
                      ++..+..|+++      ....+++++       .+|++||+|+....             .......+.+|+.|+.++++
T Consensus        59 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  132 (265)
T 2o23_A           59 NCVFAPADVTS------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR  132 (265)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            45667788743      344555444       79999999986421             23456688999999999998


Q ss_pred             HHHHh
Q psy3446         158 LAREI  162 (166)
Q Consensus       158 ~a~~~  162 (166)
                      .+...
T Consensus       133 ~~~~~  137 (265)
T 2o23_A          133 LVAGE  137 (265)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=94.92  E-value=0.075  Score=37.63  Aligned_cols=59  Identities=19%  Similarity=0.193  Sum_probs=40.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc-------c-cEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN-------V-NVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~-------~-d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+++      ...+++++++       + |++||+|+....       .......+.+|+.|+.++++.+...
T Consensus        64 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  137 (264)
T 2pd6_A           64 NHAAFQADVSE------ARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQA  137 (264)
T ss_dssp             CCEEEECCTTS------HHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCC------HHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence            45667788754      3344444433       4 999999996432       2345668899999999999988763

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=94.91  E-value=0.096  Score=37.37  Aligned_cols=59  Identities=24%  Similarity=0.329  Sum_probs=41.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++.+|+.+      ...++++++       .+|++||+|+....         .......+.+|+.|+.++++.+..
T Consensus        65 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  138 (278)
T 2bgk_A           65 VISFVHCDVTK------DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR  138 (278)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667788753      344555443       68999999986431         134566889999999999998875


Q ss_pred             h
Q psy3446         162 I  162 (166)
Q Consensus       162 ~  162 (166)
                      .
T Consensus       139 ~  139 (278)
T 2bgk_A          139 V  139 (278)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=94.88  E-value=0.099  Score=37.11  Aligned_cols=59  Identities=14%  Similarity=0.130  Sum_probs=41.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc---------cccEEEEcccccc--------chHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT---------NVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~---------~~d~i~h~aa~~~--------~~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++.++..|++++      ...+++++         .+|++||+|+...        -.......+.+|+.|+..+++.+.
T Consensus        73 ~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  146 (267)
T 1sny_A           73 NIHILEIDLRNF------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  146 (267)
T ss_dssp             TEEEEECCTTCG------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEEecCCCh------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHH
Confidence            566777887543      23344333         6999999998643        123456688999999999998886


Q ss_pred             Hh
Q psy3446         161 EI  162 (166)
Q Consensus       161 ~~  162 (166)
                      ..
T Consensus       147 ~~  148 (267)
T 1sny_A          147 PL  148 (267)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=94.88  E-value=0.15  Score=36.12  Aligned_cols=59  Identities=25%  Similarity=0.293  Sum_probs=40.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....           .......+.+|+.|+..+++.+
T Consensus        54 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  127 (257)
T 3tpc_A           54 AVRFRNADVTN------EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLA  127 (257)
T ss_dssp             -CEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceEEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            45567778643      334444443       78999999996421           2346668899999999999888


Q ss_pred             HHh
Q psy3446         160 REI  162 (166)
Q Consensus       160 ~~~  162 (166)
                      ...
T Consensus       128 ~~~  130 (257)
T 3tpc_A          128 AEV  130 (257)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.82  E-value=0.11  Score=37.25  Aligned_cols=58  Identities=16%  Similarity=0.268  Sum_probs=38.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+..|+++      +...+++++       .+|+++|+|+....           .......+.+|+.|+..+++.+
T Consensus        59 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  132 (278)
T 1spx_A           59 NVNSVVADVTT------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKA  132 (278)
T ss_dssp             GEEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceeEEecccCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            45667788754      334444443       79999999986431           2234557899999999999887


Q ss_pred             HH
Q psy3446         160 RE  161 (166)
Q Consensus       160 ~~  161 (166)
                      ..
T Consensus       133 ~~  134 (278)
T 1spx_A          133 VP  134 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=94.76  E-value=0.13  Score=36.24  Aligned_cols=58  Identities=19%  Similarity=0.135  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccccc-c-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR-F-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~-~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|++||+|+... .       .......+.+|+.|+.++++.+..
T Consensus        63 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  135 (260)
T 3awd_A           63 DVSSVVMDVTN------TESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR  135 (260)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            45667788754      334444443       6899999998543 1       123466789999999999988765

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=94.76  E-value=0.0071  Score=42.74  Aligned_cols=80  Identities=14%  Similarity=0.118  Sum_probs=42.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh--ccch
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR--QLKL   84 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~--~~~~   84 (166)
                      .++.++.+|++++..--.......-..++|++||+||.....       ..+...+++|+.|+.++.+.+....  ....
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~  127 (245)
T 3e9n_A           48 EGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGC  127 (245)
T ss_dssp             TTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             cCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe
Confidence            468899999987521000000001123689999999976432       1234578899999888887664321  1245


Q ss_pred             hhcccccCc
Q psy3446          85 FLRLKTEVP   93 (166)
Q Consensus        85 ~~~~ss~~~   93 (166)
                      ++++||...
T Consensus       128 iv~isS~~~  136 (245)
T 3e9n_A          128 VIYINSGAG  136 (245)
T ss_dssp             EEEEC----
T ss_pred             EEEEcCccc
Confidence            667776543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=94.73  E-value=0.14  Score=35.83  Aligned_cols=58  Identities=19%  Similarity=0.283  Sum_probs=40.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        59 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  130 (244)
T 2bd0_A           59 LTDTITADISD------MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA  130 (244)
T ss_dssp             EEEEEECCTTS------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eeeEEEecCCC------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            56677888754      334444443       68999999996432       234666889999999999888754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.70  E-value=0.044  Score=39.70  Aligned_cols=48  Identities=13%  Similarity=0.240  Sum_probs=35.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++..+.+|+.      ++..+.++++++|+|||+++...            +.++.+++++|++.+
T Consensus        57 ~v~~v~~D~~------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g  104 (308)
T 1qyc_A           57 GANIVHGSID------DHASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVG  104 (308)
T ss_dssp             TCEEECCCTT------CHHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHC
T ss_pred             CCEEEEeccC------CHHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcC
Confidence            4566778864      34567788889999999998542            456788888887754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.64  E-value=0.069  Score=36.29  Aligned_cols=55  Identities=18%  Similarity=0.305  Sum_probs=39.9

Q ss_pred             EeecCCCCCCCCCCCHHhHHHHhc---cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         100 SAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       100 ~~v~gD~~~~~~gls~~~~~~l~~---~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      .++.+|+.      +....+++++   .+|+++|+|+....       .......+.+|+.|+.++++.++
T Consensus        45 ~~~~~D~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  109 (207)
T 2yut_A           45 RALPADLA------DELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHAR  109 (207)
T ss_dssp             EECCCCTT------SHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cEEEeeCC------CHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45667864      3455666666   79999999986432       12456688999999999999873

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=94.62  E-value=0.2  Score=35.27  Aligned_cols=56  Identities=18%  Similarity=0.236  Sum_probs=39.1

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+.++++.+.
T Consensus        48 ~~~~~~D~~d------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  117 (250)
T 2fwm_X           48 FATEVMDVAD------AAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTM  117 (250)
T ss_dssp             SEEEECCTTC------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            4556677643      344555543       68999999986432       13466688999999999988874

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=94.60  E-value=0.054  Score=39.55  Aligned_cols=89  Identities=15%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc-----ceeeeEeecCCCCCCCCCCCHHhH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH-----FLEKISAVAGDVSLPGLGLSETDR  118 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~-----~~~~~~~v~gD~~~~~~gls~~~~  118 (166)
                      .|+-+||++.+|.++...+..             ++..+..+.+-.+....     ...++..+.+|+.      ++..+
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~-------------~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~------d~~~l   73 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLK-------------LGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD------EHEKL   73 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHH-------------TTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTT------CHHHH
T ss_pred             eEEEECCCchHHHHHHHHHHH-------------CCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCC------CHHHH
Confidence            488899999988887543221             11111111111110000     0124566788874      34668


Q ss_pred             HHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         119 ELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       119 ~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++++++|+|||+++...            +.++.+++++|++.+
T Consensus        74 ~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g  106 (318)
T 2r6j_A           74 VELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAG  106 (318)
T ss_dssp             HHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHC
T ss_pred             HHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcC
Confidence            888899999999998532            567788999888754

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=94.59  E-value=0.13  Score=37.31  Aligned_cols=59  Identities=10%  Similarity=0.160  Sum_probs=41.1

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .++.++.+|+++      ...++++++       .+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        72 ~~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  144 (303)
T 1yxm_A           72 ARVIPIQCNIRN------EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  144 (303)
T ss_dssp             CCEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccEEEEecCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            356677888753      344444443       48999999994321       233566789999999999998765

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=94.53  E-value=0.14  Score=36.41  Aligned_cols=58  Identities=24%  Similarity=0.253  Sum_probs=40.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.+++.+       .+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        55 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  126 (259)
T 4e6p_A           55 AAYAVQMDVTR------QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAAR  126 (259)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEeeCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            34567788743      334444443       78999999996431       134566788999999999988764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=94.52  E-value=0.15  Score=36.51  Aligned_cols=58  Identities=17%  Similarity=0.243  Sum_probs=41.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|+++|+|+....   .......+.+|+.|+..+++.+..
T Consensus        75 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  142 (278)
T 3sx2_A           75 RIVARQADVRD------RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIP  142 (278)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            56677788754      334444443       78999999996543   234566889999999999988754

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=94.51  E-value=0.18  Score=35.37  Aligned_cols=58  Identities=17%  Similarity=0.208  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccc-cc---c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAAT-VR---F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~-~~---~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.+      ....+++++       .+|++||+|+. ..   +    .......+.+|+.|+..+++.+..
T Consensus        58 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (258)
T 3afn_B           58 DAAFFAADLAT------SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP  130 (258)
T ss_dssp             EEEEEECCTTS------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            56677788754      344555444       79999999985 21   1    123566789999999998887653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=94.51  E-value=0.18  Score=35.63  Aligned_cols=58  Identities=22%  Similarity=0.181  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        58 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  129 (261)
T 1gee_A           58 EAIAVKGDVTV------ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             EEEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45667788753      333444433       68999999996432       234566889999999998887765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=94.50  E-value=0.15  Score=35.70  Aligned_cols=57  Identities=12%  Similarity=0.084  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+.+|+.+      ...++++++       .+|++||+|+....       .......+.+|+.|+.++++.+.
T Consensus        58 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  128 (248)
T 2pnf_A           58 KAHGVEMNLLS------EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSL  128 (248)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHC
T ss_pred             ceEEEEccCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            45567788743      344555543       78999999996432       23456688999999977766553

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.38  E-value=0.19  Score=35.34  Aligned_cols=58  Identities=16%  Similarity=0.215  Sum_probs=40.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        55 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  126 (246)
T 3osu_A           55 DSFAIQANVAD------ADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP  126 (246)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45567788743      334444443       78999999996421       234566889999999999988843

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=94.33  E-value=0.13  Score=36.73  Aligned_cols=62  Identities=13%  Similarity=0.069  Sum_probs=40.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccch------------------HHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD------------------EKIQLAVAINVLGV  152 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~------------------~~~~~~~~~Nv~G~  152 (166)
                      ++..+..|++++.-  .....++++       ..+|++||+|+.....                  ......+.+|+.|+
T Consensus        63 ~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~  140 (276)
T 1mxh_A           63 SAVLCKGDLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAP  140 (276)
T ss_dssp             CEEEEECCCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHH
T ss_pred             ceEEEeccCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHH
Confidence            45667788765410  002333333       2689999999954321                  44566889999999


Q ss_pred             HHHHHHHHH
Q psy3446         153 RAMLELARE  161 (166)
Q Consensus       153 ~~~l~~a~~  161 (166)
                      ..+++.+..
T Consensus       141 ~~l~~~~~~  149 (276)
T 1mxh_A          141 LFLIRAFAR  149 (276)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=94.31  E-value=0.17  Score=36.54  Aligned_cols=58  Identities=16%  Similarity=0.068  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        77 ~~~~~~~Dl~~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  148 (302)
T 1w6u_A           77 KVHAIQCDVRD------PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGK  148 (302)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            56677888753      334444443       46999999995321       234566889999999999887754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=94.28  E-value=0.2  Score=35.91  Aligned_cols=72  Identities=6%  Similarity=0.031  Sum_probs=48.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec---c---hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR---F---DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~---~---~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++      ++.+.+       ..++|+++|+|+...   +   ...+...+++|+.|+..+.+.+....
T Consensus        55 ~~~~~~~~Dv~~~------~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m  128 (258)
T 4gkb_A           55 PRATYLPVELQDD------AQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHL  128 (258)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeecCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            4689999999985      333333       236899999999642   1   22345678999999988877664321


Q ss_pred             --ccchhhccccc
Q psy3446          81 --QLKLFLRLKTE   91 (166)
Q Consensus        81 --~~~~~~~~ss~   91 (166)
                        ..-.++++||.
T Consensus       129 ~~~~G~IVnisS~  141 (258)
T 4gkb_A          129 KATRGAIVNISSK  141 (258)
T ss_dssp             HHHTCEEEEECCT
T ss_pred             HhcCCeEEEEeeh
Confidence              12346666664

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=94.25  E-value=0.063  Score=39.91  Aligned_cols=55  Identities=9%  Similarity=-0.113  Sum_probs=41.6

Q ss_pred             HHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHh-ccchhhccc
Q psy3446          35 RELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIR-QLKLFLRLK   89 (166)
Q Consensus        35 ~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~-~~~~~~~~s   89 (166)
                      +.+.+.++|+|||+|+...- +.+..+.+..|+.+++.+.+.+++.. ....++.+|
T Consensus        77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S  133 (329)
T 1b8p_A           77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG  133 (329)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence            56667899999999997643 44556678899999999999998863 443555555

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=94.25  E-value=0.12  Score=36.44  Aligned_cols=58  Identities=24%  Similarity=0.402  Sum_probs=41.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++     ..+.++++       ..+|++||+|+... .......+.+|+.|+.++++.+..
T Consensus        56 ~~~~~~~D~~~~-----~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~  120 (254)
T 1sby_A           56 NITFHTYDVTVP-----VAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILD  120 (254)
T ss_dssp             EEEEEECCTTSC-----HHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEEecCCC-----hHHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHH
Confidence            556677887543     02233332       36899999999653 345677889999999999988765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=94.22  E-value=0.13  Score=35.94  Aligned_cols=58  Identities=14%  Similarity=0.183  Sum_probs=36.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+.....       ......+.+|+.|+.++++.+..
T Consensus        56 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  127 (247)
T 2hq1_A           56 NVVVAKGDVKN------PEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSK  127 (247)
T ss_dssp             CEEEEESCTTS------HHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHH
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667788754      334444443       789999999864321       12455788999999988887764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=94.20  E-value=0.15  Score=36.58  Aligned_cols=58  Identities=16%  Similarity=0.120  Sum_probs=41.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....     .......+.+|+.|+..+++.+..
T Consensus        72 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  141 (287)
T 3pxx_A           72 KAYTAEVDVRD------RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALP  141 (287)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ceEEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHH
Confidence            55677788754      334444433       78999999997532     234667899999999999988754

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=94.19  E-value=0.14  Score=46.23  Aligned_cols=72  Identities=17%  Similarity=0.163  Sum_probs=48.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh----c-------CccEEEEcceeecch----------hhHHHHHHhhhhcHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR----T-------NVNVIFHGAATVRFD----------EKIQLAVAINVLGVRAM   72 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~----~-------~~d~Vih~aa~~~~~----------~~~~~~~~~nv~gt~~l   72 (166)
                      .++.++.+|++++      ++++.++    +       .+|+|||+||....+          ..+...+.+|+.|+..+
T Consensus       707 ~~v~~v~~DVsd~------esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l  780 (1878)
T 2uv9_A          707 SQLVVVPFNQGSK------QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGA  780 (1878)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHH
T ss_pred             CeEEEEEcCCCCH------HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHH
Confidence            3688999999985      3344332    1       489999999975432          33456889999999988


Q ss_pred             HHHHHHHhc-----cchhhccccc
Q psy3446          73 LELAREIRQ-----LKLFLRLKTE   91 (166)
Q Consensus        73 l~l~~~~~~-----~~~~~~~ss~   91 (166)
                      ...++....     ...++.+||.
T Consensus       781 ~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          781 IKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHHhHHHHhCCCCEEEEEcch
Confidence            876433211     1356667664

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=94.19  E-value=0.29  Score=34.40  Aligned_cols=57  Identities=19%  Similarity=0.174  Sum_probs=37.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccc---c-------chHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATV---R-------FDEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~---~-------~~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|++++      .+.+++++       .+|+++|+|+..   .       -.......+.+|+.|+..+.+.+.
T Consensus        59 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  132 (253)
T 3qiv_A           59 TAISVAVDVSDP------ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVY  132 (253)
T ss_dssp             EEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            556677887543      33444433       789999999862   1       123456688999999877766654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.14  E-value=0.29  Score=34.03  Aligned_cols=38  Identities=21%  Similarity=0.216  Sum_probs=29.3

Q ss_pred             cccEEEEcccccc--------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~--------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+...        ........+.+|+.|+..+++.+..
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  117 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT  117 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            7899999999532        1233566888999999999988765

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=94.13  E-value=0.18  Score=35.31  Aligned_cols=58  Identities=22%  Similarity=0.210  Sum_probs=39.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc----------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF----------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~----------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+.+|+++      ....+++++       .+|++||+|+....          .......+.+|+.|+..+++.+.
T Consensus        53 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  126 (250)
T 2cfc_A           53 KVLRVRADVAD------EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVL  126 (250)
T ss_dssp             GEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cEEEEEecCCC------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45667788753      334444443       78999999986432          12456688999999988777664


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       127 ~  127 (250)
T 2cfc_A          127 P  127 (250)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=94.09  E-value=0.11  Score=41.04  Aligned_cols=59  Identities=24%  Similarity=0.291  Sum_probs=43.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc--ccEEEEccccccch-------HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN--VNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~--~d~i~h~aa~~~~~-------~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+..|+++      ...+++++++  +|+|||+|+.....       ..+...+.+|+.|+.++.+++..+
T Consensus       313 ~v~~~~~Dvtd------~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~  380 (511)
T 2z5l_A          313 EVVHAACDVAE------RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI  380 (511)
T ss_dssp             EEEEEECCSSC------HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred             EEEEEEeCCCC------HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            56677788753      4556666655  99999999965422       345667889999999999987654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=94.07  E-value=0.072  Score=41.97  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             HhccccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         121 LRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       121 l~~~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+.++|+|||+|+....    ......++.+|+.|+.++++++.+
T Consensus       198 ~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~  242 (516)
T 3oh8_A          198 LLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAE  242 (516)
T ss_dssp             TTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            44679999999997532    234667889999999999998443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=94.04  E-value=0.26  Score=34.24  Aligned_cols=58  Identities=24%  Similarity=0.291  Sum_probs=40.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        53 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (235)
T 3l77_A           53 EVFYHHLDVSK------AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLD  124 (235)
T ss_dssp             CEEEEECCTTC------HHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEeccCC------HHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55667788754      334444443       68999999996432       234566889999999999888764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=94.01  E-value=0.042  Score=40.57  Aligned_cols=54  Identities=13%  Similarity=-0.055  Sum_probs=40.2

Q ss_pred             HHHhcCccEEEEcceeec-chhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          36 ELLRTNVNVIFHGAATVR-FDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        36 ~~~~~~~d~Vih~aa~~~-~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      .+.++++|+|||+|+... .+....+.+..|+.+++.+.+.+++..  ..++.++|.
T Consensus        69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SN  123 (313)
T 1hye_A           69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITN  123 (313)
T ss_dssp             GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSS
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecC
Confidence            345688999999999764 344555678999999999999998864  445555553

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=93.97  E-value=0.074  Score=37.54  Aligned_cols=46  Identities=9%  Similarity=0.057  Sum_probs=35.0

Q ss_pred             HhHHHHhc----cccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         116 TDRELLRT----NVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       116 ~~~~~l~~----~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ...+++++    .+|++||+|+......+....+.+|+.|+..+++.+..
T Consensus        50 ~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~   99 (257)
T 1fjh_A           50 QAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLP   99 (257)
T ss_dssp             HHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHH
Confidence            34555554    45999999997543456788999999999999988864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=93.97  E-value=0.25  Score=35.34  Aligned_cols=56  Identities=14%  Similarity=0.280  Sum_probs=36.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+..|+++      ....+++.+       .+|+++|+|+....       .......+.+|+.|+..+.+.+
T Consensus        52 ~~~~~~~Dv~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  121 (281)
T 3m1a_A           52 RAEAISLDVTD------GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL  121 (281)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CceEEEeeCCC------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667788744      334444443       68999999996432       2345668899999965554444

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=93.96  E-value=0.2  Score=35.51  Aligned_cols=58  Identities=19%  Similarity=0.180  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        59 ~~~~~~~D~~d------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  130 (263)
T 3ak4_A           59 GGFAVEVDVTK------RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR  130 (263)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34566778643      344555443       78999999985432       124566889999999999888764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=93.94  E-value=0.17  Score=35.94  Aligned_cols=59  Identities=12%  Similarity=0.133  Sum_probs=41.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.+      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+...
T Consensus        72 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  144 (274)
T 1ja9_A           72 QGVAIQADISK------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  144 (274)
T ss_dssp             CEEEEECCTTS------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cEEEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567788753      344444443       78999999986432       1235668899999999999988653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=93.94  E-value=0.13  Score=36.74  Aligned_cols=73  Identities=10%  Similarity=0.038  Sum_probs=49.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH-h---
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI-R---   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~-~---   80 (166)
                      .++.++.+|++++.-      .+.+.  ..+|+++++|+....       ...++..+.+|+.|+..+.+.+... .   
T Consensus        56 ~~~~~~~~Dv~d~~~------v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g  129 (247)
T 4hp8_A           56 GNASALLIDFADPLA------AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG  129 (247)
T ss_dssp             CCEEEEECCTTSTTT------TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHH------HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC
Confidence            468899999999753      22222  358999999997532       2234568899999999888764332 1   


Q ss_pred             ccchhhcccccC
Q psy3446          81 QLKLFLRLKTEV   92 (166)
Q Consensus        81 ~~~~~~~~ss~~   92 (166)
                      +.-.++++||..
T Consensus       130 ~~G~IVnisS~~  141 (247)
T 4hp8_A          130 RSGKVVNIASLL  141 (247)
T ss_dssp             CCEEEEEECCGG
T ss_pred             CCcEEEEEechh
Confidence            123567777654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=93.92  E-value=0.27  Score=34.85  Aligned_cols=58  Identities=19%  Similarity=0.219  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....++++       ..+|+++|+|+....      .......+.+|+.|+..+++.+..
T Consensus        62 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  132 (256)
T 3gaf_A           62 KAIGLECNVTD------EQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAP  132 (256)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            55667788754      23344443       378999999996432      134566889999999999988754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=93.91  E-value=0.31  Score=34.49  Aligned_cols=58  Identities=26%  Similarity=0.343  Sum_probs=40.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh--------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR--------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~--------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++.        ..+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        59 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T 2ae2_A           59 KVEASVCDLSS------RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP  131 (260)
T ss_dssp             EEEEEECCTTC------HHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCC------HHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667788754      33344443        468999999995421       234566889999999999988853

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=93.88  E-value=0.26  Score=34.97  Aligned_cols=58  Identities=19%  Similarity=0.171  Sum_probs=40.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        58 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  129 (263)
T 3ai3_A           58 RVLEVAVDVAT------PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVP  129 (263)
T ss_dssp             CEEEEECCTTS------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45667788754      334444443       78999999986431       234566889999999999887753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=93.84  E-value=0.24  Score=35.57  Aligned_cols=58  Identities=21%  Similarity=0.165  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        82 ~~~~~~~Dl~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  153 (276)
T 3r1i_A           82 KALPIRCDVTQ------PDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR  153 (276)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667788754      334444443       78999999996432       223555778999999999888765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=93.83  E-value=0.25  Score=34.98  Aligned_cols=58  Identities=19%  Similarity=0.227  Sum_probs=40.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        54 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  125 (258)
T 3a28_C           54 KAVFVGLDVTD------KANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASR  125 (258)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEccCCC------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            45667788754      233444433       68999999996432       134566889999999999888765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=93.79  E-value=0.29  Score=34.55  Aligned_cols=57  Identities=23%  Similarity=0.163  Sum_probs=38.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+.+.+.
T Consensus        52 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~  122 (255)
T 2q2v_A           52 KAVHHPADLSD------VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL  122 (255)
T ss_dssp             CEEEECCCTTS------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEeCCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45567778643      344555544       79999999985431       23456688999999988777653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=93.78  E-value=0.28  Score=35.26  Aligned_cols=59  Identities=17%  Similarity=0.211  Sum_probs=40.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+..|++++      .+.+++.       ..+|+++|+|+....       .......+.+|+.|+.++++.+...
T Consensus        80 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  152 (283)
T 1g0o_A           80 DAACVKANVGVV------EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  152 (283)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            455667786432      3333332       368999999996432       2345668899999999999988764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=93.78  E-value=0.28  Score=34.87  Aligned_cols=59  Identities=22%  Similarity=0.226  Sum_probs=41.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+..|++++      .+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+...
T Consensus        61 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  133 (262)
T 3pk0_A           61 KVIGVQTDVSDR------AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA  133 (262)
T ss_dssp             CEEEEECCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            566778887543      34444433       78999999996421       2345567899999999998887653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.75  E-value=0.16  Score=35.93  Aligned_cols=56  Identities=18%  Similarity=0.145  Sum_probs=38.3

Q ss_pred             EeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         100 SAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       100 ~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+..|+++      ..+.++++       ..+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        52 ~~~~~D~~~------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  121 (256)
T 2d1y_A           52 AFFQVDLED------ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAR  121 (256)
T ss_dssp             EEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CEEEeeCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            456678643      23344433       368999999986432       124566889999999999888754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=93.73  E-value=0.29  Score=34.92  Aligned_cols=58  Identities=21%  Similarity=0.157  Sum_probs=39.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+.+      ....++++       ..+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        81 ~~~~~~~Dl~~------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  152 (272)
T 1yb1_A           81 KVHTFVVDCSN------REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP  152 (272)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEeeCCC------HHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667788743      33344443       268999999986432       123556889999999888777654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=93.72  E-value=0.32  Score=34.69  Aligned_cols=58  Identities=22%  Similarity=0.276  Sum_probs=40.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+++      ..+.++++       ..+|++||+|+....        .......+.+|+.|+..+++.+..
T Consensus        77 ~~~~~~~Dl~~------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  149 (272)
T 4e3z_A           77 EAVAIPGDVGN------AADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR  149 (272)
T ss_dssp             EEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCC------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            56677888754      23344443       368999999996542        134566889999999999888765

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=93.72  E-value=0.3  Score=34.68  Aligned_cols=56  Identities=16%  Similarity=0.133  Sum_probs=37.8

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +..+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+.+.+.
T Consensus        55 ~~~~~~D~~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  124 (260)
T 1nff_A           55 ARYVHLDVTQ------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV  124 (260)
T ss_dssp             EEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            4566778743      344455444       79999999996432       23456688999999977666554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=93.71  E-value=0.27  Score=35.19  Aligned_cols=58  Identities=26%  Similarity=0.257  Sum_probs=40.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      ...+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        79 ~~~~~~~D~~d~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  150 (269)
T 4dmm_A           79 EAFAVKADVSQE------SEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAK  150 (269)
T ss_dssp             CEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            456677887542      33444433       68999999996432       234566889999999999888754

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=93.71  E-value=0.31  Score=34.45  Aligned_cols=58  Identities=24%  Similarity=0.224  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh------ccccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR------TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~------~~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +...+..|+++      ..+.+++.      ..+|+++|+|+....           .......+.+|+.|+..+++.+.
T Consensus        53 ~~~~~~~D~~~------~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  126 (257)
T 3tl3_A           53 RARFAAADVTD------EAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAA  126 (257)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            45667788754      23344443      379999999996432           12356688999999999998876


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       127 ~  127 (257)
T 3tl3_A          127 E  127 (257)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=93.69  E-value=0.3  Score=34.54  Aligned_cols=58  Identities=19%  Similarity=0.128  Sum_probs=39.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        56 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  127 (260)
T 1x1t_A           56 KVLYDGADLSK------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALP  127 (260)
T ss_dssp             CEEEECCCTTS------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567778753      334444443       68999999985431       234566889999999999888754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=93.63  E-value=0.29  Score=34.60  Aligned_cols=58  Identities=28%  Similarity=0.272  Sum_probs=39.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccccc--------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~--------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+...        -.......+.+|+.|+..+++.+..
T Consensus        56 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  128 (261)
T 3n74_A           56 AALAVAADISK------EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP  128 (261)
T ss_dssp             TEEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEecCCC------HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45567778754      233444433       6899999999643        1234556789999999998887754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.63  E-value=0.31  Score=34.93  Aligned_cols=58  Identities=19%  Similarity=0.233  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        78 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (280)
T 3pgx_A           78 KALTRVLDVRD------DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVP  149 (280)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            45567778743      33444443       368999999996432       233556788999999999888754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=93.62  E-value=0.31  Score=34.22  Aligned_cols=58  Identities=19%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        55 ~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  126 (246)
T 2uvd_A           55 DAIAVRADVAN------AEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSR  126 (246)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567788753      334444443       68999999996432       134566889999998887776643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=93.62  E-value=0.31  Score=34.39  Aligned_cols=58  Identities=28%  Similarity=0.160  Sum_probs=39.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        52 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  123 (256)
T 1geg_A           52 HAVAVKVDVSD------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE  123 (256)
T ss_dssp             CEEEEECCTTS------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEecCCC------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567788753      334444443       78999999985321       134556889999999988877754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=93.61  E-value=0.22  Score=35.09  Aligned_cols=58  Identities=19%  Similarity=0.129  Sum_probs=39.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+.+|+++      ....++++       ..+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        65 ~~~~~~~Dl~~------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  136 (265)
T 1h5q_A           65 KTKAYQCDVSN------TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  136 (265)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eeEEEEeeCCC------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHH
Confidence            45667788754      23344433       248999999986432       134556789999999999988765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=93.61  E-value=0.1  Score=37.23  Aligned_cols=50  Identities=12%  Similarity=0.090  Sum_probs=34.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++..+.+|+.      ++..++++++++|+|||+|+.. .        ..|+.|+.+++++|++.
T Consensus        45 ~~~~~~~D~~------d~~~~~~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~   94 (286)
T 2zcu_A           45 GITVRQADYG------DEAALTSALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA   94 (286)
T ss_dssp             TCEEEECCTT------CHHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH
T ss_pred             CCeEEEcCCC------CHHHHHHHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc
Confidence            4556778864      3466788888999999999842 1        14899999999999875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=93.59  E-value=0.077  Score=38.50  Aligned_cols=52  Identities=12%  Similarity=0.104  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++.++.+|+.      ++..+.++++++|+|||+++.....        .|+.++.+++++|++.+
T Consensus        56 ~~~~~~~D~~------d~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g  107 (313)
T 1qyd_A           56 GAKLIEASLD------DHQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAG  107 (313)
T ss_dssp             TCEEECCCSS------CHHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSC
T ss_pred             CeEEEeCCCC------CHHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcC
Confidence            4567788874      3466788888999999999865432        37889999999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=93.58  E-value=0.21  Score=35.42  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=39.4

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ...+..|+++      ....+++++       .+|+++|+|+....           .......+.+|+.|+..+++.+.
T Consensus        60 ~~~~~~D~~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  133 (261)
T 2wyu_A           60 ALLFRADVTQ------DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE  133 (261)
T ss_dssp             CEEEECCTTC------HHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred             cEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            3556778754      333444433       68999999996432           23456688999999999999886


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       134 ~  134 (261)
T 2wyu_A          134 P  134 (261)
T ss_dssp             T
T ss_pred             H
Confidence            5

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=93.57  E-value=0.35  Score=34.20  Aligned_cols=57  Identities=19%  Similarity=0.372  Sum_probs=38.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh--------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR--------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~--------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+.+      ....++++        ..+|++||+|+....       .......+.+|+.|+.++++.+.
T Consensus        64 ~~~~~~~D~~~------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~  135 (266)
T 1xq1_A           64 QVTGSVCDASL------RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH  135 (266)
T ss_dssp             CEEEEECCTTS------HHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEECCCCC------HHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45566778643      23344433        468999999986432       12455678999999999998884

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=93.49  E-value=0.33  Score=34.78  Aligned_cols=58  Identities=10%  Similarity=0.129  Sum_probs=40.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        72 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  143 (281)
T 3s55_A           72 RCISAKVDVKD------RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAP  143 (281)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45667788754      334444433       78999999996431       234566889999999999888754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=93.48  E-value=0.1  Score=36.74  Aligned_cols=53  Identities=11%  Similarity=-0.004  Sum_probs=37.3

Q ss_pred             CccEEEEcceeecc----------hhhHHHHHHhhhhcHHHHHHHHHHHh---ccchhhcccccCc
Q psy3446          41 NVNVIFHGAATVRF----------DEKIQLAVAINVLGVRAMLELAREIR---QLKLFLRLKTEVP   93 (166)
Q Consensus        41 ~~d~Vih~aa~~~~----------~~~~~~~~~~nv~gt~~ll~l~~~~~---~~~~~~~~ss~~~   93 (166)
                      .+|++||+|+....          ...+...+++|+.|+.++.+.+....   +...++++||...
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  137 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVG  137 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh
Confidence            68999999997543          12345688999999999988765421   2345777777543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=93.47  E-value=0.46  Score=34.05  Aligned_cols=58  Identities=19%  Similarity=0.182  Sum_probs=39.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEcccccc----c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~----~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.++++       ..+|+++|+|+...    +    .......+.+|+.|+..+++.+..
T Consensus        64 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  136 (281)
T 3svt_A           64 AIRYEPTDITNE------DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAR  136 (281)
T ss_dssp             EEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            566778887543      3344443       36799999999521    1    123456888999999999987765

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=93.42  E-value=0.081  Score=39.29  Aligned_cols=57  Identities=18%  Similarity=0.059  Sum_probs=40.7

Q ss_pred             HhHHHHhcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          33 TDRELLRTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        33 ~~~~~~~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .++.+.+.++|+|||+|+...- +.+..+.+..|+.+++.+.+.+++.. ...++..+|
T Consensus        68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           68 QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            3567778899999999997542 33334567899999999999888754 233444444

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.41  E-value=0.32  Score=34.66  Aligned_cols=58  Identities=22%  Similarity=0.135  Sum_probs=39.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++.+       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        53 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  124 (263)
T 2a4k_A           53 EAIAVVADVSD------PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE  124 (263)
T ss_dssp             SEEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567788754      334444433       57999999996432       123456788999999999988865

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=93.38  E-value=0.35  Score=35.67  Aligned_cols=57  Identities=21%  Similarity=0.277  Sum_probs=40.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++.++..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+.
T Consensus        60 ~~~~~~~Dvtd------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~l  130 (324)
T 3u9l_A           60 DLRTLELDVQS------QVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAAL  130 (324)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cEEEEEeecCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45677788754      334444443       79999999995421       23456678999999999999884

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=93.29  E-value=0.25  Score=35.34  Aligned_cols=57  Identities=18%  Similarity=0.152  Sum_probs=38.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+.
T Consensus        60 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~  130 (266)
T 3p19_A           60 NTLCAQVDVTD------KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL  130 (266)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEecCCC------HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45567778743      333444433       78999999996421       23455678999999999877764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=93.27  E-value=0.45  Score=34.00  Aligned_cols=97  Identities=13%  Similarity=0.073  Sum_probs=55.2

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ..|+-+||..++|..+-..             +++++..+....+-..   ........+..|+++      ..+.++++
T Consensus        15 k~vlVTGas~GIG~aia~~-------------l~~~G~~V~~~~r~~~---~~~~~~~~~~~Dv~~------~~~v~~~~   72 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDA-------------LVRYGAKVVSVSLDEK---SDVNVSDHFKIDVTN------EEEVKEAV   72 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHH-------------HHHTTCEEEEEESCC-----CTTSSEEEECCTTC------HHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHH-------------HHHCCCEEEEEeCCch---hccCceeEEEecCCC------HHHHHHHH
Confidence            5788899988777765332             2233222111111100   011133456677643      33444443


Q ss_pred             -------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 -------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 -------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                             ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  125 (269)
T 3vtz_A           73 EKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP  125 (269)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence                   368999999996432       123555788999999999887754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=93.27  E-value=0.35  Score=34.51  Aligned_cols=58  Identities=17%  Similarity=0.179  Sum_probs=39.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        72 ~~~~~~~Dl~~------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  143 (267)
T 1vl8_A           72 ETMAFRCDVSN------YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS  143 (267)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45567788754      333444433       68999999996432       123556788999999999887754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=93.23  E-value=0.32  Score=34.40  Aligned_cols=58  Identities=17%  Similarity=0.307  Sum_probs=39.8

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccc--c------cc-hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAAT--V------RF-DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~--~------~~-~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      .++.++..|++++      .+.+++++       .+|++||+|+.  .      .. .......+.+|+.|+..+++.+.
T Consensus        57 ~~~~~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  130 (264)
T 3i4f_A           57 ERLQFVQADVTKK------EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV  130 (264)
T ss_dssp             GGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence            3566778887543      33444433       78999999993  1      11 23456688999999999998874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=93.20  E-value=0.4  Score=34.36  Aligned_cols=58  Identities=14%  Similarity=0.051  Sum_probs=39.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc-------ccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN-------VNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~-------~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....++++++       +|+++|+|+....        .......+.+|+.|+..+.+.+..
T Consensus        70 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  142 (272)
T 2nwq_A           70 RVLPLTLDVRD------RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP  142 (272)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCC------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667788743      3455555543       5999999986431        234566889999999888777653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=93.16  E-value=0.3  Score=34.96  Aligned_cols=59  Identities=12%  Similarity=0.067  Sum_probs=41.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+...
T Consensus        82 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~  154 (271)
T 3v2g_A           82 RAVAIRADNRD------AEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH  154 (271)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            45667788754      334444443       78999999996431       2245668899999999999888653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=93.14  E-value=0.39  Score=33.75  Aligned_cols=58  Identities=16%  Similarity=0.190  Sum_probs=39.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      ...+++.       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        57 ~~~~~~~Dv~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  128 (247)
T 2jah_A           57 KVHVLELDVADR------QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALP  128 (247)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEECCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            455677887542      3344333       368999999986421       124566889999999999888754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=93.13  E-value=0.35  Score=34.99  Aligned_cols=58  Identities=19%  Similarity=0.218  Sum_probs=40.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.++++       ..+|+++|+|+....        .......+.+|+.|+..+++.+..
T Consensus        98 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  170 (291)
T 3ijr_A           98 KCVLLPGDLSD------EQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALS  170 (291)
T ss_dssp             CEEEEESCTTS------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            56677888754      23344443       368999999985421        234566889999999999998865

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=93.12  E-value=0.4  Score=34.68  Aligned_cols=59  Identities=14%  Similarity=0.174  Sum_probs=41.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccccc--------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR--------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~--------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .++..+..|++++      .+.+++++       .+|+++|+|+...        -...+...+.+|+.|+..+++.+..
T Consensus        87 ~~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  160 (287)
T 3rku_A           87 AKVHVAQLDITQA------EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP  160 (287)
T ss_dssp             CEEEEEECCTTCG------GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3566778887543      33455443       5899999999543        1234666889999999999888743

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=93.10  E-value=0.39  Score=34.71  Aligned_cols=38  Identities=8%  Similarity=0.084  Sum_probs=29.4

Q ss_pred             cccEEEEccccccc---------------------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF---------------------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~---------------------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|++||+|+....                     .......+.+|+.|+..+++.+..
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A          105 RCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            68999999985421                     234556889999999999888764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=93.09  E-value=0.22  Score=36.02  Aligned_cols=59  Identities=19%  Similarity=0.186  Sum_probs=42.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++..+.+|++++      ++.+.+.       .++|+++++||....       ...++..+++|+.|+.++.+.+..
T Consensus        75 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p  147 (273)
T 4fgs_A           75 GGAVGIQADSANL------AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP  147 (273)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             CCeEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4688999999995      3344332       358999999997532       224466889999999888776654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=93.07  E-value=0.32  Score=34.23  Aligned_cols=58  Identities=16%  Similarity=0.154  Sum_probs=39.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        64 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  135 (256)
T 3ezl_A           64 DFYASEGNVGD------WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVID  135 (256)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eeEEEecCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45667778643      233444433       68999999996431       234566889999999988777644

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=93.06  E-value=0.28  Score=35.28  Aligned_cols=57  Identities=26%  Similarity=0.296  Sum_probs=39.1

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +..+..|+++      ....+++++       .+|++||+|+....           .......+.+|+.|+..+++.+.
T Consensus        73 ~~~~~~Dl~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  146 (285)
T 2p91_A           73 DLVVKCDVSL------DEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL  146 (285)
T ss_dssp             CCEEECCTTC------HHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             eEEEEcCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            3456678643      334444433       68999999986432           12456688999999999999886


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       147 ~  147 (285)
T 2p91_A          147 P  147 (285)
T ss_dssp             G
T ss_pred             H
Confidence            5

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=93.05  E-value=0.38  Score=35.50  Aligned_cols=38  Identities=8%  Similarity=0.084  Sum_probs=29.3

Q ss_pred             cccEEEEccccccc---------------------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVRF---------------------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~~---------------------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|++||+|+....                     .......+.+|+.|+..+++.+..
T Consensus       142 ~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          142 RCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68999999986321                     234556789999999999888764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=93.05  E-value=0.17  Score=44.96  Aligned_cols=76  Identities=14%  Similarity=0.126  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---------CccEEEEcceeecch----------hhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---------NVNVIFHGAATVRFD----------EKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---------~~d~Vih~aa~~~~~----------~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++.++.+|++++.- + ...++.+.+         .+|++||+||....+          ..+...+.+|+.|+..+.+
T Consensus       531 a~V~vV~~DVTD~es-V-eaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltq  608 (1688)
T 2pff_A          531 STLIVVPFNQGSKQD-V-EALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVK  608 (1688)
T ss_dssp             CEEEEEECCSSSTTH-H-HHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCHHH-H-HHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            368899999999642 0 111222222         489999999975332          2345678899999998888


Q ss_pred             HHHHHhc-----cchhhccccc
Q psy3446          75 LAREIRQ-----LKLFLRLKTE   91 (166)
Q Consensus        75 l~~~~~~-----~~~~~~~ss~   91 (166)
                      .++....     ...++.+||.
T Consensus       609 aa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          609 KQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHhChHHHhCCCCEEEEEECh
Confidence            7743211     1356666664

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=93.04  E-value=0.48  Score=33.08  Aligned_cols=38  Identities=16%  Similarity=0.037  Sum_probs=29.0

Q ss_pred             cccEEEEcccccc-----c---hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         124 NVNVIFHGAATVR-----F---DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       124 ~~d~i~h~aa~~~-----~---~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      .+|+++|+|+...     .   .......+.+|+.|+..+++.+..
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  121 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATK  121 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            6899999999532     1   123455788999999999888765

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=93.03  E-value=0.31  Score=34.90  Aligned_cols=58  Identities=14%  Similarity=0.241  Sum_probs=40.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-----------hHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-----------~~~~~~~~~~Nv~G~~~~l~~a  159 (166)
                      ++..+..|++++      ...++++       ..+|+++|+|+....           .......+.+|+.|+.++++.+
T Consensus        59 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  132 (280)
T 1xkq_A           59 QVNSVVADVTTE------DGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV  132 (280)
T ss_dssp             GEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ceEEEEecCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            456677887543      3344443       268999999985422           1235668899999999998887


Q ss_pred             HH
Q psy3446         160 RE  161 (166)
Q Consensus       160 ~~  161 (166)
                      ..
T Consensus       133 ~~  134 (280)
T 1xkq_A          133 KP  134 (280)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=93.01  E-value=0.57  Score=33.10  Aligned_cols=58  Identities=16%  Similarity=0.109  Sum_probs=39.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        56 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~  127 (257)
T 3imf_A           56 QILTVQMDVRNT------DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGK  127 (257)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            556777887542      3344443       368999999995321       234566889999999999888743

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=93.00  E-value=0.26  Score=34.83  Aligned_cols=54  Identities=17%  Similarity=0.181  Sum_probs=37.1

Q ss_pred             cCccEEEEcceee-cc-------hhhHHHHHHhhhhcHHHHHHHHHHH---hccchhhcccccCc
Q psy3446          40 TNVNVIFHGAATV-RF-------DEKIQLAVAINVLGVRAMLELAREI---RQLKLFLRLKTEVP   93 (166)
Q Consensus        40 ~~~d~Vih~aa~~-~~-------~~~~~~~~~~nv~gt~~ll~l~~~~---~~~~~~~~~ss~~~   93 (166)
                      ..+|++||+|+.. ..       ...+...+++|+.|+.++.+.+...   .+...++++||...
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  135 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  135 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence            3789999999975 21       1234567899999999988876532   12345777777544

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=92.98  E-value=0.41  Score=34.10  Aligned_cols=58  Identities=17%  Similarity=0.080  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.++++       ..+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        80 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  151 (271)
T 4iin_A           80 KAAVIKFDAAS------ESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALK  151 (271)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            55667788743      23344443       378999999996432       134666889999999998887754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=92.96  E-value=0.48  Score=34.76  Aligned_cols=58  Identities=21%  Similarity=0.220  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        87 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  158 (322)
T 3qlj_A           87 EAVADGSNVAD------WDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAA  158 (322)
T ss_dssp             EEEEECCCTTS------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            55677788744      233444433       78999999996432       234566889999999999888754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=92.95  E-value=0.44  Score=33.51  Aligned_cols=56  Identities=14%  Similarity=0.151  Sum_probs=38.7

Q ss_pred             EeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         100 SAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       100 ~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+..|+++      ..+.+++.+       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        58 ~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  127 (248)
T 3op4_A           58 KGMALNVTN------PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR  127 (248)
T ss_dssp             EEEECCTTC------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEeCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            456678643      334444443       78999999996431       234566889999999999888754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=92.93  E-value=0.21  Score=36.77  Aligned_cols=70  Identities=10%  Similarity=0.062  Sum_probs=43.2

Q ss_pred             ecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH---hccchhh
Q psy3446          20 AGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI---RQLKLFL   86 (166)
Q Consensus        20 ~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~---~~~~~~~   86 (166)
                      .+|+++..- + ....+.+   ...+|++||+||.....       ..++..+.+|+.|+.++.+.+...   .+..+++
T Consensus        70 ~~D~~~~~~-~-~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV  147 (319)
T 1gz6_A           70 VANYDSVEA-G-EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRII  147 (319)
T ss_dssp             EEECCCGGG-H-HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             EEeCCCHHH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            478887531 0 0111222   23689999999975422       234567899999999888876432   2234567


Q ss_pred             ccccc
Q psy3446          87 RLKTE   91 (166)
Q Consensus        87 ~~ss~   91 (166)
                      ++||.
T Consensus       148 ~vsS~  152 (319)
T 1gz6_A          148 MTASA  152 (319)
T ss_dssp             EECCH
T ss_pred             EECCh
Confidence            77664

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=92.92  E-value=0.24  Score=44.89  Aligned_cols=72  Identities=17%  Similarity=0.158  Sum_probs=47.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh----c---------CccEEEEcceeecch----------hhHHHHHHhhhhcHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR----T---------NVNVIFHGAATVRFD----------EKIQLAVAINVLGVR   70 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~----~---------~~d~Vih~aa~~~~~----------~~~~~~~~~nv~gt~   70 (166)
                      .++.++.+|++++      ++++.++    +         .+|++||+||....+          ..+...+.+|+.|+.
T Consensus       730 ~~v~~v~~DVsd~------~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~  803 (1887)
T 2uv8_A          730 STLIVVPFNQGSK------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM  803 (1887)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHH
T ss_pred             CeEEEEEecCCCH------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHH
Confidence            4688999999985      3344332    1         589999999975332          234567899999999


Q ss_pred             HHHHHHHHHhc-----cchhhccccc
Q psy3446          71 AMLELAREIRQ-----LKLFLRLKTE   91 (166)
Q Consensus        71 ~ll~l~~~~~~-----~~~~~~~ss~   91 (166)
                      .+...++....     ...++.+||.
T Consensus       804 ~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          804 GCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            88887643211     1345666653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=92.89  E-value=0.4  Score=34.35  Aligned_cols=58  Identities=22%  Similarity=0.150  Sum_probs=39.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+.++++.+..
T Consensus        72 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  143 (277)
T 2rhc_B           72 EADGRTCDVRS------VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK  143 (277)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred             ceEEEECCCCC------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhC
Confidence            45567788753      334444433       68999999985421       123566889999999999888765

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=92.89  E-value=0.41  Score=34.26  Aligned_cols=72  Identities=13%  Similarity=0.113  Sum_probs=45.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec-----c----hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR-----F----DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~-----~----~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .+..++.+|++++.      +.+.+       ...+|+++|+|+...     +    ...+...+++|+.|+.++.+.+.
T Consensus        50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~  123 (261)
T 4h15_A           50 PEELFVEADLTTKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLV  123 (261)
T ss_dssp             CTTTEEECCTTSHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhc
Confidence            34568899999853      33333       235899999998532     1    12345678999999988877654


Q ss_pred             HHh---ccchhhccccc
Q psy3446          78 EIR---QLKLFLRLKTE   91 (166)
Q Consensus        78 ~~~---~~~~~~~~ss~   91 (166)
                      ...   +...+++++|.
T Consensus       124 p~m~~~~~G~Iv~isS~  140 (261)
T 4h15_A          124 PDMVARGSGVVVHVTSI  140 (261)
T ss_dssp             HHHHHHTCEEEEEECCG
T ss_pred             hhhhhcCCceEEEEEeh
Confidence            321   22345556554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=92.88  E-value=0.53  Score=35.11  Aligned_cols=58  Identities=14%  Similarity=0.202  Sum_probs=41.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+.+      ....++++       ..+|++||+|+....       ...+...+.+|+.|+..+++.+..
T Consensus       102 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  173 (346)
T 3kvo_A          102 KALPCIVDVRD------EQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIP  173 (346)
T ss_dssp             EEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             eEEEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            56677788754      33344443       378999999996431       234566889999999999998865

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=92.87  E-value=0.42  Score=34.26  Aligned_cols=58  Identities=24%  Similarity=0.139  Sum_probs=39.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....        .......+.+|+.|+..+.+.+..
T Consensus        75 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  147 (272)
T 4dyv_A           75 DALCVPTDVTD------PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR  147 (272)
T ss_dssp             CCEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CeEEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence            45567788754      334444443       79999999996422        123566889999999988887754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=92.84  E-value=0.49  Score=34.02  Aligned_cols=58  Identities=10%  Similarity=0.094  Sum_probs=40.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        77 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  148 (281)
T 3v2h_A           77 TVLHHPADMTK------PSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIP  148 (281)
T ss_dssp             CEEEECCCTTC------HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEeCCCCC------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            56677788754      334444443       68999999996421       223556889999999999988743

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.84  E-value=0.33  Score=35.28  Aligned_cols=58  Identities=22%  Similarity=0.285  Sum_probs=40.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|+++      ....+++++       .+|+++|+|+....         .......+.+|+.|+..+++.+..
T Consensus        79 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (297)
T 1xhl_A           79 KINAVVADVTE------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE  152 (297)
T ss_dssp             GEEEEECCTTS------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEecCCCC------HHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence            45667788754      233444433       68999999985321         123566889999999999888765

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=92.82  E-value=0.4  Score=34.29  Aligned_cols=58  Identities=16%  Similarity=0.129  Sum_probs=39.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        78 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  149 (270)
T 3ftp_A           78 EGRGAVLNVND------ATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLR  149 (270)
T ss_dssp             CCEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEEeCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            34456677643      333444433       68999999995432       234566889999999999888753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=92.78  E-value=0.37  Score=34.61  Aligned_cols=58  Identities=17%  Similarity=0.132  Sum_probs=40.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....++++       ..+|+++|+|+....        .......+.+|+.|+..+++.+..
T Consensus        77 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (286)
T 3uve_A           77 RIVTAEVDVRD------YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP  149 (286)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            56677788754      33344443       368999999996432        123556889999999999887754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=92.77  E-value=0.27  Score=35.36  Aligned_cols=58  Identities=10%  Similarity=0.166  Sum_probs=38.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEcccccc---------chHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR---------FDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~---------~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|++++      .+.++++       ..+|+++|+|+...         -.......+.+|+.|+..+++.+..
T Consensus        80 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  153 (280)
T 4da9_A           80 RVIFLRADLADL------SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK  153 (280)
T ss_dssp             CEEEEECCTTSG------GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred             cEEEEEecCCCH------HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            566778887554      2233333       37899999998621         1234556778999999998887755

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=92.77  E-value=0.42  Score=34.09  Aligned_cols=58  Identities=16%  Similarity=0.202  Sum_probs=40.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        69 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  140 (270)
T 3is3_A           69 DAIAIKADIRQV------PEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR  140 (270)
T ss_dssp             CEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            456677887542      3344443       368999999996432       234566889999999999988765

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=92.76  E-value=0.51  Score=33.41  Aligned_cols=58  Identities=16%  Similarity=0.182  Sum_probs=39.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccc-c---c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATV-R---F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~-~---~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.++++       ..+|+++|+|+.. .   +    .......+.+|+.|+..+++.+..
T Consensus        57 ~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  129 (262)
T 1zem_A           57 EARSYVCDVTSE------EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR  129 (262)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEecCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455677887542      3333333       3689999999854 1   1    123566889999999999888765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=92.73  E-value=0.39  Score=34.05  Aligned_cols=60  Identities=18%  Similarity=0.189  Sum_probs=41.7

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++..+..|+++      ....++++       ..+|++||+|+....       .......+.+|+.|+.++++.+...
T Consensus        73 ~~~~~~~~Dl~~------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  146 (266)
T 3o38_A           73 GRVEAVVCDVTS------TEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY  146 (266)
T ss_dssp             SCEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEeCCCC------HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            356778888754      33444443       367999999996331       2245668899999999999887653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=92.72  E-value=0.5  Score=33.79  Aligned_cols=58  Identities=19%  Similarity=0.102  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        76 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  147 (271)
T 4ibo_A           76 DAEAVAFDVTS------ESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAK  147 (271)
T ss_dssp             CEEECCCCTTC------HHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45667788753      334444443       68999999996421       234566889999999999887654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=92.71  E-value=0.5  Score=34.33  Aligned_cols=58  Identities=21%  Similarity=0.231  Sum_probs=40.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++++       .+|++||+|+....       .......+.+|+.|+.++++.+..
T Consensus        81 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  152 (301)
T 3tjr_A           81 DAHGVVCDVRH------LDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP  152 (301)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEccCCC------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            45667788754      233444433       78999999996421       234566889999999999988754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=92.71  E-value=0.52  Score=33.07  Aligned_cols=57  Identities=23%  Similarity=0.156  Sum_probs=38.4

Q ss_pred             eEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          99 ISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        99 ~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        51 ~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  121 (245)
T 1uls_A           51 AHPVVMDVAD------PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASE  121 (245)
T ss_dssp             CEEEECCTTC------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            3456677643      333444433       48999999995432       234566889999999999888765

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=92.69  E-value=0.52  Score=33.47  Aligned_cols=57  Identities=26%  Similarity=0.247  Sum_probs=38.0

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc--------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~--------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+++      ....+++++       .+|+++|+|+....        .......+.+|+.|+..+.+.+.
T Consensus        65 ~~~~~~~D~~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  136 (267)
T 1iy8_A           65 EVLTTVADVSD------EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVL  136 (267)
T ss_dssp             CEEEEECCTTS------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             eEEEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            45667788754      334444443       68999999986432        13456688999999987766554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=92.64  E-value=0.51  Score=33.20  Aligned_cols=58  Identities=16%  Similarity=0.118  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEcccccc----c----hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVR----F----DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~----~----~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|+++|+|+...    +    .......+.+|+.|+..+++.+..
T Consensus        47 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  119 (248)
T 3asu_A           47 NLYIAQLDVRN------RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP  119 (248)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCC------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567778743      344555543       6899999998541    1    124566889999999998887753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=92.64  E-value=0.68  Score=32.86  Aligned_cols=58  Identities=14%  Similarity=0.104  Sum_probs=39.9

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        60 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (265)
T 3lf2_A           60 RLFASVCDVLDA------LQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLP  131 (265)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677887542      3333333       368999999996422       234566889999999999888765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=92.64  E-value=0.31  Score=34.59  Aligned_cols=56  Identities=16%  Similarity=0.163  Sum_probs=38.4

Q ss_pred             EeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc------------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         100 SAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF------------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus       100 ~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~------------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ..+..|+++      ....+++++       .+|+++|+|+....            .......+.+|+.|+..+++.+.
T Consensus        62 ~~~~~D~~~------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (265)
T 1qsg_A           62 IVLQCDVAE------DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACR  135 (265)
T ss_dssp             CEEECCTTC------HHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             EEEEccCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            456677643      334444443       68999999996431            12355688999999999999886


Q ss_pred             H
Q psy3446         161 E  161 (166)
Q Consensus       161 ~  161 (166)
                      .
T Consensus       136 ~  136 (265)
T 1qsg_A          136 S  136 (265)
T ss_dssp             G
T ss_pred             H
Confidence            5

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=92.63  E-value=0.59  Score=33.37  Aligned_cols=58  Identities=21%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHH----HHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLG----VRAMLELA  159 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G----~~~~l~~a  159 (166)
                      ++.++.+|+.+      ...++++++       .+|++||+|+....       .......+.+|+.|    ++.+++.+
T Consensus        84 ~~~~~~~Dl~~------~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~  157 (279)
T 1xg5_A           84 TLIPYRCDLSN------EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSM  157 (279)
T ss_dssp             EEEEEECCTTC------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCC------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            45667788753      334444433       68999999985431       23456688999999    55555555


Q ss_pred             HH
Q psy3446         160 RE  161 (166)
Q Consensus       160 ~~  161 (166)
                      ++
T Consensus       158 ~~  159 (279)
T 1xg5_A          158 KE  159 (279)
T ss_dssp             HH
T ss_pred             Hh
Confidence            44

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=92.62  E-value=0.3  Score=34.76  Aligned_cols=58  Identities=16%  Similarity=0.164  Sum_probs=39.1

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc----------cccEEEEcccccc--------c----hHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT----------NVNVIFHGAATVR--------F----DEKIQLAVAINVLGVRAM  155 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~----------~~d~i~h~aa~~~--------~----~~~~~~~~~~Nv~G~~~~  155 (166)
                      +...+..|+++      ..+.+++++          .+|+++|+|+...        +    .......+.+|+.|+..+
T Consensus        57 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  130 (269)
T 2h7i_A           57 KAPLLELDVQN------EEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASM  130 (269)
T ss_dssp             CCCEEECCTTC------HHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             CceEEEccCCC------HHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHH
Confidence            34556778643      333444433          7899999998643        1    123455788999999999


Q ss_pred             HHHHHH
Q psy3446         156 LELARE  161 (166)
Q Consensus       156 l~~a~~  161 (166)
                      ++.+..
T Consensus       131 ~~~~~~  136 (269)
T 2h7i_A          131 AKALLP  136 (269)
T ss_dssp             HHHHGG
T ss_pred             HHHHHH
Confidence            988754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=92.60  E-value=0.6  Score=33.53  Aligned_cols=58  Identities=24%  Similarity=0.196  Sum_probs=39.8

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        76 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  147 (277)
T 3gvc_A           76 GAAACRVDVSD------EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP  147 (277)
T ss_dssp             SCEEEECCTTC------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            44567778754      23344433       368999999996432       234566889999999999888754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=92.59  E-value=0.46  Score=34.07  Aligned_cols=58  Identities=17%  Similarity=0.182  Sum_probs=39.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ....+++.+       .+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus        78 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  149 (276)
T 2b4q_A           78 DCQAIPADLSS------EAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLP  149 (276)
T ss_dssp             CEEECCCCTTS------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEeeCCC------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            45567778753      333444433       68999999985432       234567889999999888877653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=92.57  E-value=0.47  Score=34.04  Aligned_cols=58  Identities=24%  Similarity=0.215  Sum_probs=39.7

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        74 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~  145 (277)
T 4dqx_A           74 KAFGVRVDVSS------AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP  145 (277)
T ss_dssp             TEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEecCCC------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45567788754      334444443       68999999995321       234566788999999999887754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=92.56  E-value=0.53  Score=34.49  Aligned_cols=58  Identities=12%  Similarity=0.145  Sum_probs=40.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|+++      ..+.+++++       .+|++||+|+....       .......+.+|+.|+..+++.+..
T Consensus       108 ~~~~~~~Dv~d------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  179 (317)
T 3oec_A          108 RIIARQADVRD------LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLP  179 (317)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            55677788754      334444433       68999999996432       234566889999999999888754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=92.55  E-value=0.41  Score=34.07  Aligned_cols=58  Identities=16%  Similarity=0.212  Sum_probs=40.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++.      ..++++       ..+|+++|+|+....       .......+.+|+.|+..+++.+..
T Consensus        71 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  142 (266)
T 4egf_A           71 DVHTVAIDLAEPD------APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGK  142 (266)
T ss_dssp             CEEEEECCTTSTT------HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            5667788886543      233332       378999999996431       123556889999999999888754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=92.54  E-value=0.65  Score=32.78  Aligned_cols=57  Identities=16%  Similarity=0.096  Sum_probs=38.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc------cccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~------~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+++      ....+++++      ++|+++|+|+....       .......+.+|+.|+..+.+.+.
T Consensus        59 ~~~~~~~D~~~------~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  128 (260)
T 2z1n_A           59 QVDIVAGDIRE------PGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAA  128 (260)
T ss_dssp             CEEEEECCTTC------HHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEccCCC------HHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45567788743      344455443      48999999985321       22456688999999987776664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=92.53  E-value=0.59  Score=33.32  Aligned_cols=57  Identities=16%  Similarity=0.078  Sum_probs=39.2

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhc-------cccEEEEccccccc---------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRT-------NVNVIFHGAATVRF---------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~-------~~d~i~h~aa~~~~---------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      +...+..|+++      ..+.+++++       .+|+++|+|+....         .......+.+|+.|+..+++.+.
T Consensus        58 ~~~~~~~Dv~~------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  130 (271)
T 3tzq_B           58 GAVHHVVDLTN------EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI  130 (271)
T ss_dssp             TCEEEECCTTC------HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCC------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            34556677643      334444443       78999999996522         12355688999999999998884

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=92.51  E-value=0.48  Score=34.96  Aligned_cols=57  Identities=19%  Similarity=0.253  Sum_probs=40.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHhcc-----ccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLRTN-----VNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR  160 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~~~-----~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~  160 (166)
                      ++..+..|+++      ...+++++++     +|++||+|+....       .......+.+|+.|+.++++.+.
T Consensus        58 ~~~~~~~Dv~d------~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  126 (327)
T 1jtv_A           58 SLETLQLDVRD------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL  126 (327)
T ss_dssp             SEEEEECCTTC------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEEecCCC------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45667788743      3456666554     8999999985321       12456688999999999988864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.16
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.03
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.78
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.77
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.75
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.54
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.52
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.49
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.47
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.39
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.38
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.38
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.3
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.25
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.22
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.13
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.12
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.09
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.02
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.96
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.94
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	97.94
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	97.75
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.58
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	97.58
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.36
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.34
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	97.2
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.18
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.12
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	96.94
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	96.88
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.79
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.65
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.46
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	96.33
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	96.22
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.21
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.21
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	96.06
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.01
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.78
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.72
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	95.71
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	95.67
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.59
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	95.58
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	95.4
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.38
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.32
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.31
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	95.21
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.14
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.13
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	95.09
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.09
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	95.02
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	94.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	94.97
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	94.94
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	94.91
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	94.91
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	94.8
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.75
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	94.7
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	94.6
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	94.6
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	94.46
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	94.35
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	94.31
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	94.18
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	94.12
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	94.12
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	94.08
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	93.99
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	93.97
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	93.96
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	93.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	93.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	93.85
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	93.49
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.38
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	93.37
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	93.33
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	93.26
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	93.12
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	92.98
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	92.82
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	92.71
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	92.28
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.04
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.44
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	91.25
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	89.29
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	87.83
d2fg1a1	154	Hypothetical protein BT1257 {Bacteroides thetaiota	86.25
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	85.16
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	84.02
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	83.81
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	83.77
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	82.86
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	82.75
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	81.79
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	81.7
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	81.54
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	80.71
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	80.28
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	80.21
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	80.05
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	80.01

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=2.6e-11  Score=89.89  Aligned_cols=102  Identities=15%  Similarity=0.068  Sum_probs=73.0

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHh--ccchh
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR--QLKLF   85 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~--~~~~~   85 (166)
                      .++++++.||+++.      +.+++++.  ++|+|||+||..+...   +....+++|+.||.++++.|++..  +..+|
T Consensus        54 ~~~~~~~~~Dl~d~------~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~  127 (357)
T d1db3a_          54 NPKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRF  127 (357)
T ss_dssp             -CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEE
T ss_pred             CCCeEEEEeecCCH------HHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEE
Confidence            35799999999984      45666666  4599999999876554   335678999999999999999753  33458


Q ss_pred             hcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          86 LRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        86 ~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      +++||..+++.+...++.+|  .+..+.+.|...|++
T Consensus       128 i~~SS~~vYG~~~~~~~~E~--~~~~P~~~Y~~sK~~  162 (357)
T d1db3a_         128 YQASTSELYGLVQEIPQKET--TPFYPRSPYAVAKLY  162 (357)
T ss_dssp             EEEEEGGGGTTCCSSSBCTT--SCCCCCSHHHHHHHH
T ss_pred             EEEEchhhhCCCCCCCcCCC--CCCCCCChHHHHHHH
Confidence            99999887765444455555  344455666666554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=4.9e-10  Score=82.21  Aligned_cols=76  Identities=16%  Similarity=0.072  Sum_probs=60.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.||++++      +.+.++.+  ++|+|||+||.......   ....+++|+.||.++++.|++. +.+++++.
T Consensus        50 ~~~~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~  122 (338)
T d1udca_          50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFS  122 (338)
T ss_dssp             SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             CCCEEEEeecCCH------HHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEec
Confidence            4799999999985      34666655  78999999998765543   3467899999999999999985 56778888


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||..++..
T Consensus       123 Ss~~vy~~  130 (338)
T d1udca_         123 SSATVYGD  130 (338)
T ss_dssp             EEGGGGCS
T ss_pred             CcceEEcc
Confidence            88776643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=2.1e-09  Score=78.99  Aligned_cols=76  Identities=17%  Similarity=0.097  Sum_probs=59.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|++++      +.++.+..  ++|+|||+||.......   ......+|+.|+.++++.|++ .+.+++++.
T Consensus        51 ~~v~~~~~Dl~d~------~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~-~~i~~~i~~  123 (347)
T d1z45a2          51 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFVFS  123 (347)
T ss_dssp             SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred             cCCeEEEeecCCH------HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHh-cccceEEee
Confidence            4789999999984      44555544  78999999998754333   245788999999999999998 456789999


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||..+++.
T Consensus       124 SS~~vyg~  131 (347)
T d1z45a2         124 SSATVYGD  131 (347)
T ss_dssp             EEGGGGCC
T ss_pred             cceeeecC
Confidence            99877653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.78  E-value=9.5e-09  Score=75.99  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=59.1

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHh-------
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIR-------   80 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~-------   80 (166)
                      .++++++.+|++++.      .+..+.+  ++|+|||+||..+...+.   ...+++|+.||.++++.|++..       
T Consensus        49 ~~~~~~~~~Dl~d~~------~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~  122 (361)
T d1kewa_          49 SNRYNFEHADICDSA------EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK  122 (361)
T ss_dssp             CTTEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHH
T ss_pred             cCCcEEEEccCCCHH------HHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence            358999999999853      3555544  589999999987654433   4578999999999999998742       


Q ss_pred             -ccchhhcccccCccce
Q psy3446          81 -QLKLFLRLKTEVPHFL   96 (166)
Q Consensus        81 -~~~~~~~~ss~~~~~~   96 (166)
                       ...+|+++||..+++.
T Consensus       123 ~~~~~~i~~SS~~vyg~  139 (361)
T d1kewa_         123 KNNFRFHHISTDEVYGD  139 (361)
T ss_dssp             HHHCEEEEEEEGGGGCC
T ss_pred             cCceEEEEeccceeeCC
Confidence             2346889999877643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.3e-08  Score=74.38  Aligned_cols=100  Identities=12%  Similarity=0.030  Sum_probs=69.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHh--ccchhh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIR--QLKLFL   86 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~--~~~~~~   86 (166)
                      .+++++.||++++      ..+..+..  ++++|+|+||......+.   ...+++|+.||.++++++++..  +..+|+
T Consensus        56 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i  129 (347)
T d1t2aa_          56 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFY  129 (347)
T ss_dssp             -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEE
T ss_pred             CCcEEEEeecCCc------hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEE
Confidence            4789999999985      33555543  578999999987665443   4567899999999999998853  234688


Q ss_pred             cccccCccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          87 RLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        87 ~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      +.||..+++.....++.++  .+..+.+.|...|+
T Consensus       130 ~~SS~~vyg~~~~~~~~E~--~~~~P~~~Yg~sK~  162 (347)
T d1t2aa_         130 QASTSELYGKVQEIPQKET--TPFYPRSPYGAAKL  162 (347)
T ss_dssp             EEEEGGGTCSCSSSSBCTT--SCCCCCSHHHHHHH
T ss_pred             EecchheecCCCCCCCCCC--CCCCCCCHHHHHHH
Confidence            9999888765544455555  33344555554444

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.75  E-value=3.4e-08  Score=71.65  Aligned_cols=101  Identities=18%  Similarity=0.070  Sum_probs=74.3

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      ..+++++.+|+++.      .........+|.|+|+|+........   ...+++|+.|+.++++.|++. +.+.+++.|
T Consensus        54 ~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~S  126 (322)
T d1r6da_          54 DPRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVS  126 (322)
T ss_dssp             CTTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CCCeEEEEeccccc------hhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEee
Confidence            35799999999885      33566677899999999886544432   457889999999999999874 567899999


Q ss_pred             ccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          90 TEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        90 s~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      |..+++.....++.++  .+..+.+.|...|++
T Consensus       127 s~~~yg~~~~~~~~E~--~~~~p~~~Y~~sK~~  157 (322)
T d1r6da_         127 TNQVYGSIDSGSWTES--SPLEPNSPYAASKAG  157 (322)
T ss_dssp             EGGGGCCCSSSCBCTT--SCCCCCSHHHHHHHH
T ss_pred             cceeecCCCCCCCCCC--CCCCCCCHHHHHHHH
Confidence            9888765544455554  345556666666554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.68  E-value=1.8e-08  Score=75.00  Aligned_cols=75  Identities=15%  Similarity=0.018  Sum_probs=55.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh------HHHHHHhhhhcHHHHHHHHHHHhccchh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK------IQLAVAINVLGVRAMLELAREIRQLKLF   85 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~------~~~~~~~nv~gt~~ll~l~~~~~~~~~~   85 (166)
                      .+++++.|||++.      +.+..+++  ++|+|||+||......+      ....+.+|+.||.++++.|++......+
T Consensus        67 ~~i~~~~~Dl~d~------~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~  140 (393)
T d1i24a_          67 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHL  140 (393)
T ss_dssp             CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CCcEEEEccCCCH------HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccce
Confidence            4689999999985      34666655  56999999998654432      2346789999999999999986555566


Q ss_pred             hcccccCcc
Q psy3446          86 LRLKTEVPH   94 (166)
Q Consensus        86 ~~~ss~~~~   94 (166)
                      ++.|+...+
T Consensus       141 i~~ss~~~~  149 (393)
T d1i24a_         141 VKLGTMGEY  149 (393)
T ss_dssp             EEECCGGGG
T ss_pred             eeccccccc
Confidence            666665443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.68  E-value=4.9e-08  Score=71.25  Aligned_cols=100  Identities=19%  Similarity=0.089  Sum_probs=74.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|+.+.      ..........+.|+|+||......+   ....+.+|+.|+.++++.|++. +..++++.||
T Consensus        70 ~~~~~~~~d~~d~------~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS  142 (341)
T d1sb8a_          70 SNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAAS  142 (341)
T ss_dssp             TTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred             CCeeEEeeccccc------cccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEccc
Confidence            4689999999884      3355666788999999997764433   3457889999999999999984 5678999999


Q ss_pred             cCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          91 EVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        91 ~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      ..+++...-.+..+|  .+..+.+.|...|++
T Consensus       143 ~~vyg~~~~~~~~E~--~~~~p~~~Y~~sK~~  172 (341)
T d1sb8a_         143 SSTYGDHPGLPKVED--TIGKPLSPYAVTKYV  172 (341)
T ss_dssp             GGGGTTCCCSSBCTT--CCCCCCSHHHHHHHH
T ss_pred             ceeeCCCCCCCccCC--CCCCCCCcchHHHHH
Confidence            988865554455555  455566676666544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.2e-08  Score=69.12  Aligned_cols=78  Identities=21%  Similarity=0.184  Sum_probs=56.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE   91 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~   91 (166)
                      ++.+..+|+.+..           ..++|+|||+||..+...   .....+++|+.|+.++++.|++. +. +++++||.
T Consensus        50 ~~d~~~~~~~~~~-----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~  116 (312)
T d2b69a1          50 NFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTS  116 (312)
T ss_dssp             TEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEG
T ss_pred             ceEEEehHHHHHH-----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEECh
Confidence            5677777776542           247999999999876432   33567899999999999999984 33 68899998


Q ss_pred             CccceeeeEeecCC
Q psy3446          92 VPHFLEKISAVAGD  105 (166)
Q Consensus        92 ~~~~~~~~~~v~gD  105 (166)
                      .+++.....+..++
T Consensus       117 ~vy~~~~~~~~~e~  130 (312)
T d2b69a1         117 EVYGDPEVHPQSED  130 (312)
T ss_dssp             GGGBSCSSSSBCTT
T ss_pred             heecCCCCCCCCcc
Confidence            88765444444444

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.52  E-value=7e-08  Score=69.85  Aligned_cols=73  Identities=26%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      ..+++++.||++++      +.+.++.+  ++|+|||+||.......   .....++|+.||.++++.+......+.+.+
T Consensus        48 ~~~~~~i~~Di~~~------~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~  121 (338)
T d1orra_          48 LGNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY  121 (338)
T ss_dssp             TCCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             cCCcEEEEcccCCH------HHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence            35799999999984      34566655  46999999999876543   356788999999999999998654444555


Q ss_pred             cccc
Q psy3446          88 LKTE   91 (166)
Q Consensus        88 ~ss~   91 (166)
                      .|+.
T Consensus       122 sS~~  125 (338)
T d1orra_         122 SSTN  125 (338)
T ss_dssp             EEEG
T ss_pred             cccc
Confidence            5544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.49  E-value=2e-07  Score=68.50  Aligned_cols=76  Identities=16%  Similarity=0.038  Sum_probs=59.1

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc----hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~----~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      ....++..+|+++.      +....+.+++|.|||+|+....    ..........|+.|+.++++.+++ ...+++++.
T Consensus        57 ~~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~-~~vk~~i~~  129 (363)
T d2c5aa1          57 MFCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIKRFFYA  129 (363)
T ss_dssp             GTCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred             cccCcEEEeechhH------HHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHh-hCccccccc
Confidence            34578889999874      3466677899999999987654    233455788999999999999998 456788899


Q ss_pred             cccCccc
Q psy3446          89 KTEVPHF   95 (166)
Q Consensus        89 ss~~~~~   95 (166)
                      ||...++
T Consensus       130 SS~~~~~  136 (363)
T d2c5aa1         130 SSACIYP  136 (363)
T ss_dssp             EEGGGSC
T ss_pred             ccccccc
Confidence            9887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.47  E-value=2.6e-07  Score=67.23  Aligned_cols=76  Identities=13%  Similarity=0.024  Sum_probs=55.2

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHhccchhhccc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQLKLFLRLK   89 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~s   89 (166)
                      .++++++.||+++..     +..+.+..++|+|||+||........   ...+.+|+.|+.++++.+.+.. .+ +.+.|
T Consensus        44 ~~~~~~i~~Di~~~~-----~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~-~~~~s  116 (342)
T d2blla1          44 HPHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KR-IIFPS  116 (342)
T ss_dssp             CTTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEC
T ss_pred             CCCeEEEECccCChH-----HHHHHHHhCCCccccccccccccccccCCcccccccccccccccccccccc-cc-ccccc
Confidence            457999999999863     22344566899999999987654443   4578899999999999998743 33 34556


Q ss_pred             ccCccc
Q psy3446          90 TEVPHF   95 (166)
Q Consensus        90 s~~~~~   95 (166)
                      |...++
T Consensus       117 s~~~~~  122 (342)
T d2blla1         117 TSEVYG  122 (342)
T ss_dssp             CGGGGB
T ss_pred             cccccc
Confidence            655543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.39  E-value=6.3e-07  Score=64.47  Aligned_cols=102  Identities=17%  Similarity=0.059  Sum_probs=69.7

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .++++++.+|++++.      .+.....  ..++++|+|+.......   ....+..|+.|+.++++.|++......+.+
T Consensus        48 ~~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~  121 (321)
T d1rpna_          48 EGDIQYEDGDMADAC------SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ  121 (321)
T ss_dssp             GGGEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEE
T ss_pred             cCCcEEEEccccChH------HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccc
Confidence            357999999999853      3444333  46889999887654433   456788999999999999998766667888


Q ss_pred             ccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          88 LKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        88 ~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      .|+...++.....+..++  .+..+.++|...|++
T Consensus       122 ~Ss~~~~~~~~~~~~~E~--~~~~p~~~Y~~sK~~  154 (321)
T d1rpna_         122 ASTSEMFGLIQAERQDEN--TPFYPRSPYGVAKLY  154 (321)
T ss_dssp             EEEGGGGCSCSSSSBCTT--SCCCCCSHHHHHHHH
T ss_pred             ccchhhcCcccCCCCCCC--CCccccChhHHHHHH
Confidence            888776644433334343  344455666655554

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=4.1e-09  Score=76.17  Aligned_cols=90  Identities=11%  Similarity=-0.027  Sum_probs=58.4

Q ss_pred             HHhHHHHhc--CccEEEEcceeecch----hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCC
Q psy3446          32 ETDRELLRT--NVNVIFHGAATVRFD----EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGD  105 (166)
Q Consensus        32 ~~~~~~~~~--~~d~Vih~aa~~~~~----~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD  105 (166)
                      ......+..  ++|.|+|+|+.....    .+..+.+.+|+.||.++++.|++. +.++|+++||..+++.....++.++
T Consensus        43 ~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~  121 (315)
T d1e6ua_          43 SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAES  121 (315)
T ss_dssp             HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             HHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCC
Confidence            444555543  589999999876532    233456789999999999999884 5677999999888754433333333


Q ss_pred             CCC---C-----CCCCCHHhHHHHh
Q psy3446         106 VSL---P-----GLGLSETDRELLR  122 (166)
Q Consensus       106 ~~~---~-----~~gls~~~~~~l~  122 (166)
                      ...   +     .||.++...|+++
T Consensus       122 ~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_         122 ELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHH
Confidence            211   1     1555555555554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.9e-07  Score=65.08  Aligned_cols=76  Identities=13%  Similarity=0.026  Sum_probs=57.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRL   88 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~   88 (166)
                      .+++++.+|+++.      +.+.++..  ++++|+|+||..+...+   ....+++|+.||.+++++++. .+++.+++.
T Consensus        58 ~~~~~~~~Dl~d~------~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~-~~v~~~i~~  130 (346)
T d1ek6a_          58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA-HGVKNLVFS  130 (346)
T ss_dssp             CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred             CCcEEEEeecccc------ccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhh-cCccccccc
Confidence            4789999999984      33454443  56789999998765443   245789999999999999987 456678888


Q ss_pred             cccCccce
Q psy3446          89 KTEVPHFL   96 (166)
Q Consensus        89 ss~~~~~~   96 (166)
                      ||...++.
T Consensus       131 ss~~~~~~  138 (346)
T d1ek6a_         131 SSATVYGN  138 (346)
T ss_dssp             EEGGGGCS
T ss_pred             ccceeeec
Confidence            88766543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.30  E-value=1.5e-06  Score=63.34  Aligned_cols=73  Identities=23%  Similarity=0.316  Sum_probs=56.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhH---HHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKI---QLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~---~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.||+++.      +.+..+....+.|+|+|+........   ...+++|+.|+.++++.++...  .+++++||
T Consensus        52 ~~i~~~~~Di~d~------~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss  123 (346)
T d1oc2a_          52 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVST  123 (346)
T ss_dssp             SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEE
T ss_pred             CCeEEEEccCCCH------HHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--cccccccc
Confidence            5899999999884      45778888999999999987654433   4578999999999999998754  34566666


Q ss_pred             cCcc
Q psy3446          91 EVPH   94 (166)
Q Consensus        91 ~~~~   94 (166)
                      ..++
T Consensus       124 ~~vy  127 (346)
T d1oc2a_         124 DEVY  127 (346)
T ss_dssp             GGGG
T ss_pred             ceEe
Confidence            6554

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.25  E-value=2.5e-06  Score=62.95  Aligned_cols=74  Identities=15%  Similarity=0.057  Sum_probs=54.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .++.++.||++++.      .++.+.+   .+|+|||+||.......   .......|+.|+.++++.++.. ....+.+
T Consensus        69 ~~~~~~~~Di~d~~------~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~  141 (383)
T d1gy8a_          69 RYAALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIF  141 (383)
T ss_dssp             CCCEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred             cceEEEECcccCHH------Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccc
Confidence            36889999999953      3555443   57999999998765433   2456789999999999999984 4556666


Q ss_pred             ccccCcc
Q psy3446          88 LKTEVPH   94 (166)
Q Consensus        88 ~ss~~~~   94 (166)
                      .++...+
T Consensus       142 ~~s~~~~  148 (383)
T d1gy8a_         142 SSSAAIF  148 (383)
T ss_dssp             EEEGGGT
T ss_pred             ccccccc
Confidence            6665543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.22  E-value=2.9e-06  Score=61.67  Aligned_cols=100  Identities=16%  Similarity=0.101  Sum_probs=64.7

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhc
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLR   87 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~   87 (166)
                      .++++++.||++++      +.+.++..  .+++|+|+||......   .......+|+.|+.++++.++.......+..
T Consensus        55 ~~~i~~~~~Dl~d~------~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~  128 (356)
T d1rkxa_          55 ADGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVN  128 (356)
T ss_dssp             TTTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEE
T ss_pred             ccCCeEEEeeccCh------HhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccc
Confidence            35799999999985      33455544  5799999999865433   3355788999999999999998665555655


Q ss_pred             ccccCcc-ceeeeEeecCCCCCCCCCCCHHhHHH
Q psy3446          88 LKTEVPH-FLEKISAVAGDVSLPGLGLSETDREL  120 (166)
Q Consensus        88 ~ss~~~~-~~~~~~~v~gD~~~~~~gls~~~~~~  120 (166)
                      .|+...+ ......+..++  .+..+.+++...+
T Consensus       129 ~s~~~~~~~~~~~~~~~~~--~~~~p~~~y~~~k  160 (356)
T d1rkxa_         129 ITSDKCYDNKEWIWGYREN--EAMGGYDPYSNSK  160 (356)
T ss_dssp             ECCGGGBCCCCSSSCBCTT--SCBCCSSHHHHHH
T ss_pred             ccccccccccccccccccc--cccCCCCcccccc
Confidence            5555433 22233333333  3334455554444

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.17  E-value=2.6e-06  Score=61.27  Aligned_cols=100  Identities=21%  Similarity=0.214  Sum_probs=63.0

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-------cceeeeEeecCCCCCCCCCCCHHh
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-------HFLEKISAVAGDVSLPGLGLSETD  117 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-------~~~~~~~~v~gD~~~~~~gls~~~  117 (166)
                      |+-|||+++.|.++-..+.             .+...+..++.++....       ....++..+.+|+.      +...
T Consensus         3 ILVTGatGfIGs~lv~~Ll-------------~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~------~~~~   63 (338)
T d1orra_           3 LLITGGCGFLGSNLASFAL-------------SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR------NKND   63 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHH-------------HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTT------CHHH
T ss_pred             EEEECCCcHHHHHHHHHHH-------------HCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccC------CHHH
Confidence            7789999888888744321             12122222222221110       01235667888873      3455


Q ss_pred             HHHHhcc--ccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         118 RELLRTN--VNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       118 ~~~l~~~--~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ++++.++  .|+|||+|+......   .......+|+.||.+++++|.+.+
T Consensus        64 l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~  114 (338)
T d1orra_          64 VTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN  114 (338)
T ss_dssp             HHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccc
Confidence            6666544  599999999866443   346688899999999999998864

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=4.5e-06  Score=60.56  Aligned_cols=100  Identities=14%  Similarity=0.083  Sum_probs=64.3

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc--------ceeeeEeecCCCCCCCCCCCHH
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH--------FLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~--------~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      |+-+||+++.|..+...             +......+..++++++....        ...++.++.+|+.      +..
T Consensus         3 iLItG~tGfIG~~l~~~-------------L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------d~~   63 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQ-------------LLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR------NEA   63 (338)
T ss_dssp             EEEETTTSHHHHHHHHH-------------HHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTT------CHH
T ss_pred             EEEECCCCHHHHHHHHH-------------HHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecC------CHH
Confidence            67788888877776432             22322233334443333221        1235677888873      445


Q ss_pred             hHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         117 DRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       117 ~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .+.++.+  ++|+|||+||......   ....+..+|+.||.++|+.|++.+
T Consensus        64 ~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~  115 (338)
T d1udca_          64 LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN  115 (338)
T ss_dssp             HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC
Confidence            5667665  6899999999654332   345788999999999999998863

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.12  E-value=9.4e-07  Score=64.38  Aligned_cols=72  Identities=22%  Similarity=0.189  Sum_probs=59.4

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ...++.+|++++..      +..+..++|+|+|+|+...+..+.......|+.||.++++.|++....+.+++.||..
T Consensus        63 ~~~~~~~Dl~~~~~------~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~  134 (342)
T d1y1pa1          63 FETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV  134 (342)
T ss_dssp             EEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred             ccEEEeccccchhh------hhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccce
Confidence            34568899998653      4566788999999999988888777788899999999999998865677888888854

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.09  E-value=5.9e-06  Score=60.08  Aligned_cols=101  Identities=12%  Similarity=0.077  Sum_probs=64.4

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc--------ceeeeEeecCCCCCCCCCCCH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH--------FLEKISAVAGDVSLPGLGLSE  115 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~--------~~~~~~~v~gD~~~~~~gls~  115 (166)
                      +|+-+||+++.|.++...+             .+.+..+..++.+++....        ...++.++.+|+.      +.
T Consensus         3 ~ILVTGatGfIG~~lv~~L-------------l~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~------d~   63 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVEL-------------IENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC------DR   63 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHH-------------HHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTT------CH
T ss_pred             EEEEeCCCcHHHHHHHHHH-------------HHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecC------CH
Confidence            5888999999887764322             2222233333333332211        1235666778863      34


Q ss_pred             HhHHHHhc--cccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         116 TDRELLRT--NVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       116 ~~~~~l~~--~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ...+++..  ++|+|||+||....   ......++.+|+.|+.++++.|++.+
T Consensus        64 ~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~  116 (347)
T d1z45a2          64 KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN  116 (347)
T ss_dssp             HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcc
Confidence            55665543  68999999997542   23345688999999999999998753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.02  E-value=2.7e-06  Score=60.11  Aligned_cols=81  Identities=17%  Similarity=0.051  Sum_probs=50.2

Q ss_pred             HhHHHHhc--CccEEEEcceeecchh---hHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCccceeeeEeecCCCC
Q psy3446          33 TDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPHFLEKISAVAGDVS  107 (166)
Q Consensus        33 ~~~~~~~~--~~d~Vih~aa~~~~~~---~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~~~~~~~~v~gD~~  107 (166)
                      +.++++.+  ++|+|||+||......   .....+..|+.++.++++.+++. . ..+.++||...+....-.+..++  
T Consensus        44 ~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~E~--  119 (298)
T d1n2sa_          44 KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTGDIPWQET--  119 (298)
T ss_dssp             HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCTTCCBCTT--
T ss_pred             HHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccccCCCCCCCccc--
Confidence            44555554  5699999999775432   33557889999999999998763 3 34556666655433333344444  


Q ss_pred             CCCCCCCHHh
Q psy3446         108 LPGLGLSETD  117 (166)
Q Consensus       108 ~~~~gls~~~  117 (166)
                      .+..+.+.+.
T Consensus       120 ~~~~p~~~y~  129 (298)
T d1n2sa_         120 DATSPLNVYG  129 (298)
T ss_dssp             SCCCCSSHHH
T ss_pred             cccCCCchHh
Confidence            2333444443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=4.9e-06  Score=57.28  Aligned_cols=75  Identities=19%  Similarity=0.041  Sum_probs=60.8

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV   92 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~   92 (166)
                      ..++.++.+|+.+.      +.+.....++|+|||+++......+...+..+|+.++.++.+.|++ .+.+.|+++|+..
T Consensus        58 ~~~i~~~~~D~~~~------~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~fi~~Ss~~  130 (232)
T d2bkaa1          58 YKNVNQEVVDFEKL------DDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKG  130 (232)
T ss_dssp             GGGCEEEECCGGGG------GGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred             cceeeeeeeccccc------ccccccccccccccccccccccccchhhhhhhcccccceeeecccc-cCccccccCCccc
Confidence            45788888998774      3456667889999999998877777777889999999999999988 4677899998876


Q ss_pred             cc
Q psy3446          93 PH   94 (166)
Q Consensus        93 ~~   94 (166)
                      .+
T Consensus       131 ~~  132 (232)
T d2bkaa1         131 AD  132 (232)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.94  E-value=1.9e-05  Score=56.81  Aligned_cols=100  Identities=9%  Similarity=-0.026  Sum_probs=63.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh--cCccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhc----cch
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR--TNVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQ----LKL   84 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~--~~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~----~~~   84 (166)
                      ..++++.+|+++.      +.+....  .++|+|||+||......+   .......|+.|+.++++.++....    ..+
T Consensus        56 ~~~~~~~~Di~~~------~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~  129 (339)
T d1n7ha_          56 ALMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVK  129 (339)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCE
T ss_pred             cceEEEEccccCH------HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhccccccccee
Confidence            4588999999884      3344443  367999999998765433   345788999999999998876421    223


Q ss_pred             hhcccccCccceeeeEeecCCCCCCCCCCCHHhHHHHh
Q psy3446          85 FLRLKTEVPHFLEKISAVAGDVSLPGLGLSETDRELLR  122 (166)
Q Consensus        85 ~~~~ss~~~~~~~~~~~v~gD~~~~~~gls~~~~~~l~  122 (166)
                      +.+.|+.+.+.... .+..++  .+..+.+.|...+++
T Consensus       130 ~~~~ss~~~~~~~~-~~~~E~--~~~~p~~~Y~~sK~~  164 (339)
T d1n7ha_         130 YYQAGSSEMFGSTP-PPQSET--TPFHPRSPYAASKCA  164 (339)
T ss_dssp             EEEEEEGGGGTTSC-SSBCTT--SCCCCCSHHHHHHHH
T ss_pred             eeecccceecccCC-CCCCCC--CCCCCcchhhHHHHH
Confidence            44556655443222 233343  344556666666654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=2.8e-06  Score=62.23  Aligned_cols=60  Identities=18%  Similarity=0.290  Sum_probs=45.2

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccc--cEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNV--NVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~--d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++..+.+|+.      +...++++.++.  |+|+|+||.....   ......+.+|+.||.++|++|++.
T Consensus        55 ~~~~~~~~Dl~------d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~  119 (357)
T d1db3a_          55 PKFHLHYGDLS------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL  119 (357)
T ss_dssp             CCEEECCCCSS------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCeEEEEeecC------CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            46677888863      455677776654  9999999975432   345667899999999999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=4.1e-05  Score=55.20  Aligned_cols=101  Identities=11%  Similarity=0.004  Sum_probs=62.1

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH-hccchhhcccccCc--cceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI-RQLKLFLRLKTEVP--HFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~-~~~~~~~~~ss~~~--~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      |+-+||+++.|.++...+             +.+. ..+..++..+....  ...+++.++.+|+....     ...+.+
T Consensus         3 ILITG~tGfiG~~l~~~L-------------l~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~-----~~~~~~   64 (342)
T d2blla1           3 VLILGVNGFIGNHLTERL-------------LREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-----EWIEYH   64 (342)
T ss_dssp             EEEETCSSHHHHHHHHHH-------------HHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-----HHHHHH
T ss_pred             EEEECCCcHHHHHHHHHH-------------HHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChH-----HHHHHH
Confidence            677899988887764322             2221 11222222222111  12356778899975331     223445


Q ss_pred             hccccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         122 RTNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       122 ~~~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .+++|+|+|+|+......   .......+|+.|+.+++++|.+.+
T Consensus        65 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~  109 (342)
T d2blla1          65 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR  109 (342)
T ss_dssp             HHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             HhCCCccccccccccccccccCCcccccccccccccccccccccc
Confidence            678999999999754332   345678899999999999998763

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.58  E-value=3.1e-05  Score=56.07  Aligned_cols=60  Identities=22%  Similarity=0.202  Sum_probs=47.5

Q ss_pred             EeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3446         100 SAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQL  165 (166)
Q Consensus       100 ~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~~l  165 (166)
                      ..+.+|+.++.      .+.++..++|.++|+|+...+..+...++..|+.||.++|+.|.+.+.+
T Consensus        65 ~~~~~Dl~~~~------~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v  124 (342)
T d1y1pa1          65 TAVVEDMLKQG------AYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSV  124 (342)
T ss_dssp             EEECSCTTSTT------TTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred             EEEeccccchh------hhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccc
Confidence            34667875442      2445667899999999998888888888999999999999999987644

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=6.8e-05  Score=50.31  Aligned_cols=70  Identities=11%  Similarity=0.079  Sum_probs=53.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      .+++++.||++++      +.+.+++.++|+|||+++......+    ..++..+++++++.+++ .+.++++++|+...
T Consensus        46 ~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~-~~v~r~i~~ss~~~  114 (205)
T d1hdoa_          46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKA-HGVDKVVACTSAFL  114 (205)
T ss_dssp             CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHH-HTCCEEEEECCGGG
T ss_pred             cccccccccccch------hhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHh-cCCCeEEEEeeeec
Confidence            5699999999984      5678888999999999987543222    23456789999999887 45678888887654


Q ss_pred             c
Q psy3446          94 H   94 (166)
Q Consensus        94 ~   94 (166)
                      +
T Consensus       115 ~  115 (205)
T d1hdoa_         115 L  115 (205)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.00011  Score=52.56  Aligned_cols=41  Identities=24%  Similarity=0.282  Sum_probs=32.6

Q ss_pred             ccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         123 TNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++|+|||+||....   .........+|+.|+.+++++|++.+
T Consensus        64 ~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~  107 (312)
T d2b69a1          64 IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG  107 (312)
T ss_dssp             CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            469999999996543   23355678899999999999998863

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00044  Score=47.13  Aligned_cols=102  Identities=16%  Similarity=0.001  Sum_probs=64.0

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHh--ccchhhccccc-CccceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR--QLKLFLRLKTE-VPHFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~--~~~~~~~~ss~-~~~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      ..|+-+||++.+|.++...+             ..+..  +...+.+-... .......+....+|+..      ...+.
T Consensus        15 k~IlItGaTG~iG~~l~~~L-------------l~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~   75 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEI-------------LEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYA   75 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHH-------------HHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGG
T ss_pred             CEEEEECCCcHHHHHHHHHH-------------HhCCCCCEEEEEecChhhhcccccceeeeeeecccc------ccccc
Confidence            46899999999888763321             22211  11111110000 11112334444456533      23455


Q ss_pred             HHhccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         120 LLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +..+++|+++|+++......+...++.+|+.++.+++++|.+.+
T Consensus        76 ~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  119 (232)
T d2bkaa1          76 SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG  119 (232)
T ss_dssp             GGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccchhhhhhhcccccceeeecccccC
Confidence            66788999999999877777788899999999999999998753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.34  E-value=3.6e-05  Score=56.28  Aligned_cols=60  Identities=20%  Similarity=0.300  Sum_probs=43.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++..+.+|+.      +...++++.+  ++|+|||+||......   .......+|+.|+.+++++|++.
T Consensus        50 ~~~~~~~~Dl~------d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~  114 (361)
T d1kewa_          50 NRYNFEHADIC------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY  114 (361)
T ss_dssp             TTEEEEECCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcEEEEccCC------CHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            46667788874      3445666544  5799999999654222   23557899999999999999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.20  E-value=0.00071  Score=48.89  Aligned_cols=99  Identities=16%  Similarity=-0.060  Sum_probs=61.0

Q ss_pred             EEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-cceeeeEeecCCCCCCCCCCCHHhHHHHhc
Q psy3446          45 IFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-HFLEKISAVAGDVSLPGLGLSETDRELLRT  123 (166)
Q Consensus        45 Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-~~~~~~~~v~gD~~~~~~gls~~~~~~l~~  123 (166)
                      |+-+||++++|.++...+             .+++..+..++..+.... ..........+|+      .+.....++.+
T Consensus        18 ILVTGgsGfIGs~lv~~L-------------~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~------~~~~~~~~~~~   78 (363)
T d2c5aa1          18 ISITGAGGFIASHIARRL-------------KHEGHYVIASDWKKNEHMTEDMFCDEFHLVDL------RVMENCLKVTE   78 (363)
T ss_dssp             EEEETTTSHHHHHHHHHH-------------HHTTCEEEEEESSCCSSSCGGGTCSEEEECCT------TSHHHHHHHHT
T ss_pred             EEEECCCCHHHHHHHHHH-------------HHCcCEEEEEeCCCccchhhhcccCcEEEeec------hhHHHHHHHhh
Confidence            788999998888774322             122222222322222211 1112223344554      23455667778


Q ss_pred             cccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         124 NVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       124 ~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++|.|+|+|+....    ..........|+.|+.+++++|++.
T Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~  121 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN  121 (363)
T ss_dssp             TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCeEeecccccccccccccccccccccccchhhHHHHhHHhh
Confidence            99999999976554    3445667888999999999999875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.18  E-value=0.0019  Score=46.96  Aligned_cols=61  Identities=16%  Similarity=0.114  Sum_probs=43.7

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHh---ccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLR---TNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~---~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .....+.+|+.      +...++++.   ..+|+|+|+|+.....   .........|+.|+.++++.|++.+
T Consensus        69 ~~~~~~~~Di~------d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~  135 (383)
T d1gy8a_          69 RYAALEVGDVR------NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK  135 (383)
T ss_dssp             CCCEEEESCTT------CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEECccc------CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC
Confidence            34566778874      334456554   3579999999975543   2344578899999999999998863

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.12  E-value=0.00059  Score=49.93  Aligned_cols=61  Identities=15%  Similarity=0.071  Sum_probs=44.3

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH------HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE------KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~------~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++.++.+|+.      +...++++.+  ++|+|+|+||......      ........|+.||.+++++|++..
T Consensus        67 ~~i~~~~~Dl~------d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~  135 (393)
T d1i24a_          67 KSIELYVGDIC------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG  135 (393)
T ss_dssp             CCCEEEESCTT------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcEEEEccCC------CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence            46778889974      3445666654  4699999998644322      244577899999999999999853

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=96.94  E-value=0.0022  Score=45.92  Aligned_cols=61  Identities=25%  Similarity=0.359  Sum_probs=46.9

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++..+.+|+.      +.....++....+.|+|+|+.....   ......+..|+.|+.++++.|...+
T Consensus        52 ~~i~~~~~Di~------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~  115 (346)
T d1oc2a_          52 DRVELVVGDIA------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD  115 (346)
T ss_dssp             SSEEEEECCTT------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             CCeEEEEccCC------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc
Confidence            46677888863      4566788888999999999875433   2334578899999999999998864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.88  E-value=0.0057  Score=43.56  Aligned_cols=109  Identities=16%  Similarity=0.092  Sum_probs=66.6

Q ss_pred             HHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccC-----------c-cceeeeEeec
Q psy3446          36 ELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEV-----------P-HFLEKISAVA  103 (166)
Q Consensus        36 ~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~-----------~-~~~~~~~~v~  103 (166)
                      ..+..+.-.|+-+||++..|.++...+..             .+..+..++..++..           . .....+..+.
T Consensus        10 ~~~~~~~k~iLVTG~tGfIGs~lv~~L~~-------------~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (341)
T d1sb8a_          10 KELPAQPKVWLITGVAGFIGSNLLETLLK-------------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ   76 (341)
T ss_dssp             HHHHHSCCEEEEETTTSHHHHHHHHHHHH-------------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred             HhCCCCCCEEEEecCCCHHHHHHHHHHHH-------------CcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEe
Confidence            34445677899999999999887543321             111111111111100           0 0113455677


Q ss_pred             CCCCCCCCCCCHHhHHHHhccccEEEEccccccc---hHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         104 GDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF---DEKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       104 gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~---~~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +|..      +...........+.++|+++....   ..+....+..|+.|+.+++++|++.+
T Consensus        77 ~d~~------d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~  133 (341)
T d1sb8a_          77 GDIR------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK  133 (341)
T ss_dssp             CCTT------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             eccc------cccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC
Confidence            7752      334455666778999999986543   33455588999999999999999874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0029  Score=45.24  Aligned_cols=60  Identities=17%  Similarity=0.131  Sum_probs=41.5

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++.++.+|+.      +....++...  ..++++|+||......   .+......|+.|+.+++++|++.
T Consensus        58 ~~~~~~~~Dl~------d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~  122 (346)
T d1ek6a_          58 RSVEFEEMDIL------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH  122 (346)
T ss_dssp             CCCEEEECCTT------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEeecc------ccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc
Confidence            35667788864      3444555443  4568999999654322   24457889999999999999875

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.65  E-value=0.003  Score=45.15  Aligned_cols=103  Identities=17%  Similarity=0.140  Sum_probs=62.9

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc------cceeeeEeecCCCCCCCCCCCHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP------HFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~------~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      --|+-+||+++.|.++...+             ..++..+..+.+......      ...+.+.++.+|+..      ..
T Consensus         9 KkILVTG~tGfIGs~lv~~L-------------l~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d------~~   69 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWL-------------QTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD------QN   69 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHH-------------HHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC------HH
T ss_pred             CEEEEECCCCHHHHHHHHHH-------------HHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC------hH
Confidence            45778999988887764332             222222332322211111      112356778888743      34


Q ss_pred             hHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy3446         117 DRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIRQ  164 (166)
Q Consensus       117 ~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~~  164 (166)
                      .+.++.+  ..++|+|+|+.....   ........+|+.|+.+++++|.+.+.
T Consensus        70 ~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~  122 (356)
T d1rkxa_          70 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG  122 (356)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred             hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccc
Confidence            4444443  468999999965322   34566889999999999999988653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.46  E-value=0.0054  Score=43.42  Aligned_cols=100  Identities=9%  Similarity=0.022  Sum_probs=59.4

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-------------cceeeeEeecCCCCCCC
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-------------HFLEKISAVAGDVSLPG  110 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-------------~~~~~~~~v~gD~~~~~  110 (166)
                      .++-|||+++.|.++...+             ..++..+..+++.++.+.             .....+..+.+|+.   
T Consensus         3 ~~LVTGatGfiG~~lv~~L-------------l~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~---   66 (339)
T d1n7ha_           3 IALITGITGQDGSYLTEFL-------------LGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLT---   66 (339)
T ss_dssp             EEEEETTTSHHHHHHHHHH-------------HHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTT---
T ss_pred             EEEEeCCccHHHHHHHHHH-------------HHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEcccc---
Confidence            4677899988888764322             223233333443322110             01123445667753   


Q ss_pred             CCCCHHhHHHHh--ccccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         111 LGLSETDRELLR--TNVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       111 ~gls~~~~~~l~--~~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                         +...+.+..  ..+|+|+|+||......   .+......|+.|+.++++.++..
T Consensus        67 ---~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~  120 (339)
T d1n7ha_          67 ---DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH  120 (339)
T ss_dssp             ---CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhc
Confidence               233444443  35799999999765433   34567888999999999998764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=96.33  E-value=0.0079  Score=42.44  Aligned_cols=61  Identities=23%  Similarity=0.223  Sum_probs=43.4

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhccccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      .++..+.+|...      ...........|.|+|+|+.....   ......+.+|+.|+.++++.|.+.+
T Consensus        55 ~~~~~~~~d~~~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~  118 (322)
T d1r6da_          55 PRLRFVHGDIRD------AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG  118 (322)
T ss_dssp             TTEEEEECCTTC------HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             CCeEEEEecccc------chhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC
Confidence            356667777532      334555667899999999764332   3355578899999999999998753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.22  E-value=0.0098  Score=41.73  Aligned_cols=101  Identities=12%  Similarity=0.055  Sum_probs=60.4

Q ss_pred             EEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc-------cceeeeEeecCCCCCCCCCCCHH
Q psy3446          44 VIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP-------HFLEKISAVAGDVSLPGLGLSET  116 (166)
Q Consensus        44 ~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~-------~~~~~~~~v~gD~~~~~~gls~~  116 (166)
                      .|+-+||+++.|.++...+             .+++..+..+++.++...       ...+++..+.+|+..      ..
T Consensus         2 ~vLItG~tGfiG~~l~~~L-------------l~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d------~~   62 (321)
T d1rpna_           2 SALVTGITGQDGAYLAKLL-------------LEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD------AC   62 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHH-------------HHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC------HH
T ss_pred             EEEEECCCCHHHHHHHHHH-------------HHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccC------hH
Confidence            3778888888887764332             122222222222222110       123456778888743      33


Q ss_pred             hHHHHhc--cccEEEEccccccchH---HHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         117 DRELLRT--NVNVIFHGAATVRFDE---KIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       117 ~~~~l~~--~~d~i~h~aa~~~~~~---~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      ...+...  ..++++|+|+......   +...+...|+.|+.++|+.|++.+
T Consensus        63 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~  114 (321)
T d1rpna_          63 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS  114 (321)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             HhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhC
Confidence            4444332  3578888887654433   356678899999999999998865

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.21  E-value=0.0084  Score=41.02  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=49.0

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ..++.++.+|++++.      +.+++       ...+|+++|+|+....+       ..+...+++|+.|+.++.+.+..
T Consensus        51 ~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  124 (244)
T d1nffa_          51 ADAARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK  124 (244)
T ss_dssp             GGGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hCcceEEEeecCCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHh
Confidence            357889999999953      33333       23589999999976432       33456889999999988875533


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .+...+++++|.
T Consensus       125 ~m~~~~~G~Ii~isS~  140 (244)
T d1nffa_         125 PMKEAGRGSIINISSI  140 (244)
T ss_dssp             HHHHHTCEEEEEECCG
T ss_pred             HHHhcCcceEEecccc
Confidence            2   122346666664

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.21  E-value=0.0015  Score=43.74  Aligned_cols=61  Identities=10%  Similarity=0.095  Sum_probs=45.6

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchh----------------hHHHHHHhhhhcHHHHHHHH
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDE----------------KIQLAVAINVLGVRAMLELA   76 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~----------------~~~~~~~~nv~gt~~ll~l~   76 (166)
                      ..+++++.+|++++      +.+.++.+++|.|||+|+......                .......+|+.|+.+++..+
T Consensus        46 ~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (252)
T d2q46a1          46 GGEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA  119 (252)
T ss_dssp             TCCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH
T ss_pred             cCCcEEEEeeeccc------cccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc
Confidence            45789999999884      457778899999999998653211                11235678999999999887


Q ss_pred             HHH
Q psy3446          77 REI   79 (166)
Q Consensus        77 ~~~   79 (166)
                      ...
T Consensus       120 ~~~  122 (252)
T d2q46a1         120 KVA  122 (252)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0097  Score=42.24  Aligned_cols=60  Identities=12%  Similarity=0.183  Sum_probs=42.2

Q ss_pred             eeeEeecCCCCCCCCCCCHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446          97 EKISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus        97 ~~~~~v~gD~~~~~~gls~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      .++..+.+|+.      +.....++..  +.++++|+|+.....   .+....+.+|+.||.+++++|+++
T Consensus        56 ~~~~~~~~Dl~------d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~  120 (347)
T d1t2aa_          56 GNMKLHYGDLT------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC  120 (347)
T ss_dssp             -CEEEEECCTT------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCcEEEEeecC------CchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHc
Confidence            35667788863      3445566543  457899998865433   334556799999999999999886

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.01  E-value=0.029  Score=38.21  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=47.0

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHHhc--CccEEEEcceeecchhh---HHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELLRT--NVNVIFHGAATVRFDEK---IQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~~~--~~d~Vih~aa~~~~~~~---~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++.-|..+.++ .+...++++.+  ++|+|||+|+.......   .......|+.++..+.+.++...  ..+.+.|+
T Consensus        26 ~~Vi~~~r~~~D~-~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss  102 (281)
T d1vl0a_          26 VEVIPTDVQDLDI-TNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQIST  102 (281)
T ss_dssp             EEEEEECTTTCCT-TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEE
T ss_pred             CEEEEeechhccC-CCHHHHHHHHHHcCCCEEEeeccccccccccccchhhccccccccccccccccccc--cccccccc
Confidence            4555555544332 22344555554  57999999998764332   34567788888888888877632  33445555


Q ss_pred             cCccc
Q psy3446          91 EVPHF   95 (166)
Q Consensus        91 ~~~~~   95 (166)
                      ..++.
T Consensus       103 ~~v~~  107 (281)
T d1vl0a_         103 DYVFD  107 (281)
T ss_dssp             GGGSC
T ss_pred             ceeee
Confidence            54443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.78  E-value=0.017  Score=39.32  Aligned_cols=72  Identities=14%  Similarity=0.200  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +++++       ...+|+++|+|+....       ...+...+++|+.|+..+.+.+...
T Consensus        57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~  130 (240)
T d2bd0a1          57 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL  130 (240)
T ss_dssp             CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence            46889999999953      33333       2358999999997542       2334568899999999888766543


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...++++||.
T Consensus       131 m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1         131 MERQHSGHIFFITSV  145 (240)
T ss_dssp             HHHHTCEEEEEECCG
T ss_pred             HHhcCCCceEEEech
Confidence            2   22345566554

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.72  E-value=0.014  Score=39.75  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=49.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.       ..+|+++|+|+.....       ..++..+++|+.|+.++.+.+...
T Consensus        51 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~  124 (244)
T d1edoa_          51 GQAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI  124 (244)
T ss_dssp             CEEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            4788999999995      3343332       3689999999975422       234568899999999888766543


Q ss_pred             ---hccchhhcccccC
Q psy3446          80 ---RQLKLFLRLKTEV   92 (166)
Q Consensus        80 ---~~~~~~~~~ss~~   92 (166)
                         .+...++++||..
T Consensus       125 m~~~~~G~IVnisS~~  140 (244)
T d1edoa_         125 MMKKRKGRIINIASVV  140 (244)
T ss_dssp             HHHHTCEEEEEECCTH
T ss_pred             HHHcCCcEEEEEcChh
Confidence               1234566666643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=95.71  E-value=0.023  Score=39.01  Aligned_cols=73  Identities=15%  Similarity=0.094  Sum_probs=49.4

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ..++.++.+|++++      ++.+++.       ..+|++||+|+.....       ..+...+.+|+.|+.++.+.+..
T Consensus        50 ~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p  123 (254)
T d1hdca_          50 GDAARYQHLDVTIE------EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP  123 (254)
T ss_dssp             GGGEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEEcccCCH------HHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHH
Confidence            35789999999985      3344332       3689999999975422       23356789999999988876643


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .+...++++||.
T Consensus       124 ~m~~~~~G~II~isS~  139 (254)
T d1hdca_         124 AMKDAGGGSIVNISSA  139 (254)
T ss_dssp             HHHHHTCEEEEEECCG
T ss_pred             HHhhcCCCeecccccc
Confidence            2   223456666664

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=95.67  E-value=0.022  Score=38.87  Aligned_cols=72  Identities=19%  Similarity=0.152  Sum_probs=49.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+       ...+|+++|+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        52 ~~~~~~~~Dvs~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~  125 (247)
T d2ew8a1          52 RRVLTVKCDVSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG  125 (247)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhH
Confidence            4789999999995      334433       23689999999975422       244568899999999888766432


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...+++++|.
T Consensus       126 m~~~~~G~Iv~isS~  140 (247)
T d2ew8a1         126 MKRNGWGRIINLTST  140 (247)
T ss_dssp             HHHHTCEEEEEECCG
T ss_pred             HHhcCCCCccccccc
Confidence            1   22345666654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.026  Score=38.55  Aligned_cols=59  Identities=14%  Similarity=0.135  Sum_probs=44.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++++.+.       ..+|+++|+|+... ..+++..+++|+.++..+..++...
T Consensus        54 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~  119 (254)
T d2gdza1          54 QKTLFIQCDVADQ------QQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDY  119 (254)
T ss_dssp             GGEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeecCCH------HHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHH
Confidence            4789999999995      3343332       36899999999865 4566778999999998887776543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.014  Score=38.49  Aligned_cols=97  Identities=12%  Similarity=0.022  Sum_probs=60.4

Q ss_pred             cEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc-CccceeeeEeecCCCCCCCCCCCHHhHHHH
Q psy3446          43 NVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE-VPHFLEKISAVAGDVSLPGLGLSETDRELL  121 (166)
Q Consensus        43 d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~-~~~~~~~~~~v~gD~~~~~~gls~~~~~~l  121 (166)
                      .-|+-+||++..|.++...+             .++...+..+.+-.+. ......+...+.+|+.      +..++++.
T Consensus         4 kkIlV~GatG~iG~~v~~~L-------------l~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~------d~~~l~~a   64 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQA-------------VQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVL------QAADVDKT   64 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHH-------------HHTTCEEEEEESCGGGSCSSSCCCSEEEESCTT------SHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHH-------------HHCcCEEEEEEcChhhccccccccccccccccc------chhhHHHH
Confidence            45778899988887764322             2222233333322111 1122345667888874      34668888


Q ss_pred             hccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         122 RTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       122 ~~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++++|+|||+++......+    ...+..|++++++.+++.
T Consensus        65 l~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~  101 (205)
T d1hdoa_          65 VAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH  101 (205)
T ss_dssp             HTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc
Confidence            8999999999876432222    235678999999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.021  Score=38.96  Aligned_cols=73  Identities=15%  Similarity=0.086  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch----h---hHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD----E---KIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~----~---~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++..+.+|+++++      ..+.+       ...+|++||+|+.....    .   .++..+++|+.|+.++.+.+-..
T Consensus        56 ~~~~~~~~Dvs~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  129 (244)
T d1yb1a_          56 AKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA  129 (244)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhh
Confidence            47899999999963      23332       23589999999986421    1   23458899999999888765432


Q ss_pred             h---ccchhhcccccC
Q psy3446          80 R---QLKLFLRLKTEV   92 (166)
Q Consensus        80 ~---~~~~~~~~ss~~   92 (166)
                      .   +...++.+||..
T Consensus       130 m~~~~~G~Iv~isS~~  145 (244)
T d1yb1a_         130 MTKNNHGHIVTVASAA  145 (244)
T ss_dssp             HHHTTCEEEEEECCCC
T ss_pred             HHhcCCceEEEeecch
Confidence            1   223455666543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.015  Score=40.30  Aligned_cols=71  Identities=10%  Similarity=0.037  Sum_probs=47.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|+++..      ..+++       ...+|++||.||....       ...+...+++|+.|+.++.+.+...
T Consensus        53 ~~~~~~~~Dvs~~~------sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  126 (275)
T d1wmaa1          53 LSPRFHQLDIDDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL  126 (275)
T ss_dssp             CCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             CcEEEEEEecCCHH------HHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36889999999953      33322       2368999999997532       2234557889999999988876543


Q ss_pred             h-ccchhhcccc
Q psy3446          80 R-QLKLFLRLKT   90 (166)
Q Consensus        80 ~-~~~~~~~~ss   90 (166)
                      . +..+++.++|
T Consensus       127 m~~~g~ivnisS  138 (275)
T d1wmaa1         127 IKPQGRVVNVSS  138 (275)
T ss_dssp             EEEEEEEEEECC
T ss_pred             HHhcCCcccccc
Confidence            2 2234455554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.32  E-value=0.036  Score=37.95  Aligned_cols=72  Identities=15%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.       ..+|++||+|+....+       ..+...+.+|+.|+.++.+.+...
T Consensus        55 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~  128 (260)
T d1x1ta1          55 VKVLYDGADLSKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH  128 (260)
T ss_dssp             SCEEEECCCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCH------HHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhh
Confidence            3788999999995      3344332       3589999999975321       234568899999998887765433


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...++.++|.
T Consensus       129 m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1         129 MKKQGFGRIINIASA  143 (260)
T ss_dssp             HHHHTCEEEEEECCG
T ss_pred             HhhcCCceEeecccc
Confidence            1   22345666654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.31  E-value=0.032  Score=38.16  Aligned_cols=58  Identities=21%  Similarity=0.087  Sum_probs=42.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|+++++      +.+.+.       ..+|++||+|+.....       ..++..+++|+.|+.++.+.+.
T Consensus        51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~  122 (257)
T d2rhca1          51 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL  122 (257)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CcEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHh
Confidence            46899999999953      343332       3589999999975322       2345688999999999887664

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.028  Score=38.45  Aligned_cols=72  Identities=14%  Similarity=0.167  Sum_probs=47.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeec----ch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVR----FD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~----~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++      ++.+++.       ..+|++||+|+...    +.    ..++..+++|+.|+.++.+.+..
T Consensus        51 ~~~~~~~~Dvs~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p  124 (250)
T d1ydea1          51 PGAVFILCDVTQE------DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP  124 (250)
T ss_dssp             TTEEEEECCTTSH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCeEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhH
Confidence            4688999999995      3344332       35899999999542    21    22456789999999988886654


Q ss_pred             Hh--ccchhhccccc
Q psy3446          79 IR--QLKLFLRLKTE   91 (166)
Q Consensus        79 ~~--~~~~~~~~ss~   91 (166)
                      ..  ....++.+||.
T Consensus       125 ~m~~~~G~Ii~isS~  139 (250)
T d1ydea1         125 YLRKSQGNVINISSL  139 (250)
T ss_dssp             HHHHHTCEEEEECCH
T ss_pred             HHHhCCCCCcccccc
Confidence            32  12345555554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.14  E-value=0.034  Score=38.16  Aligned_cols=73  Identities=19%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec----ch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR----FD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~----~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++..+.+|++++.      +.+.+       ...+|+++|+||...    +.    ..++..+++|+.|+.++.+.+..
T Consensus        55 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  128 (258)
T d1iy8a_          55 AEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK  128 (258)
T ss_dssp             CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CeEEEEeccCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHh
Confidence            36889999999953      34433       236899999998542    21    23456889999999988876543


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .+...+++++|..
T Consensus       129 ~m~~~~~G~Ii~isS~~  145 (258)
T d1iy8a_         129 IMREQGSGMVVNTASVG  145 (258)
T ss_dssp             HHHHHTCCEEEEECCGG
T ss_pred             hhhhhcCCCCcccccHh
Confidence            2   1233466666643

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.13  E-value=0.048  Score=37.22  Aligned_cols=58  Identities=26%  Similarity=0.121  Sum_probs=41.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|+++++      +.+.+       ...+|+++|+||....       ...+...+++|+.|+.++.+.+.
T Consensus        50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~  121 (255)
T d1gega_          50 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV  121 (255)
T ss_dssp             CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CcEEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhc
Confidence            47889999999953      33333       2368999999997532       12345688999999988877643

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.043  Score=37.50  Aligned_cols=72  Identities=15%  Similarity=0.152  Sum_probs=47.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec---c---hhhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR---F---DEKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~---~---~~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|+++++      +.+.+       ...+|+++|+|+...   +   ...++..+++|+.|+.++.+.+....
T Consensus        60 ~~~~~~~~Dvs~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m  133 (255)
T d1fmca_          60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM  133 (255)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhh
Confidence            46889999999953      33332       236899999999753   2   22345688999999998887554321


Q ss_pred             ---ccchhhccccc
Q psy3446          81 ---QLKLFLRLKTE   91 (166)
Q Consensus        81 ---~~~~~~~~ss~   91 (166)
                         +...++.+||.
T Consensus       134 ~~~~~g~Ii~isS~  147 (255)
T d1fmca_         134 EKNGGGVILTITSM  147 (255)
T ss_dssp             HHHTCEEEEEECCG
T ss_pred             cccccccccccccc
Confidence               22234555553

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.09  E-value=0.017  Score=39.49  Aligned_cols=71  Identities=31%  Similarity=0.390  Sum_probs=48.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc------CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT------NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~------~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      .++.++.+|++++      ++.+.+.+      .+|.|+|+|+.....       ..+...+.+|+.|+.++.++.+. .
T Consensus        62 ~~v~~~~~Dv~d~------~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-~  134 (259)
T d2fr1a1          62 ARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE-L  134 (259)
T ss_dssp             CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-S
T ss_pred             ccccccccccchH------HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc-c
Confidence            3689999999995      33555433      378999999975422       22344678899999998887655 3


Q ss_pred             ccchhhccccc
Q psy3446          81 QLKLFLRLKTE   91 (166)
Q Consensus        81 ~~~~~~~~ss~   91 (166)
                      ....++.+||.
T Consensus       135 ~~~~iv~~SS~  145 (259)
T d2fr1a1         135 DLTAFVLFSSF  145 (259)
T ss_dssp             CCSEEEEEEEH
T ss_pred             CCceEeeecch
Confidence            34456666664

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.02  E-value=0.049  Score=37.10  Aligned_cols=72  Identities=15%  Similarity=0.170  Sum_probs=49.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.       ..+|++||+|+.....       ..+...+.+|+.|+..+.+.+...
T Consensus        59 ~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~  132 (251)
T d2c07a1          59 YESSGYAGDVSKK------EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR  132 (251)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc
Confidence            4689999999995      3344332       3689999999975321       344668899999999888765432


Q ss_pred             ---hccchhhccccc
Q psy3446          80 ---RQLKLFLRLKTE   91 (166)
Q Consensus        80 ---~~~~~~~~~ss~   91 (166)
                         .+...++++||.
T Consensus       133 m~~~~~G~IVnisS~  147 (251)
T d2c07a1         133 MINNRYGRIINISSI  147 (251)
T ss_dssp             HHHHTCEEEEEECCT
T ss_pred             cccCCCeEEEEECCH
Confidence               223456666664

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.00  E-value=0.069  Score=36.05  Aligned_cols=75  Identities=15%  Similarity=0.123  Sum_probs=48.8

Q ss_pred             cccceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          12 FLEKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        12 ~~~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      ...++..+.+|+++++      +.+++       ...+|+++|+|+....       ...++..+++|+.|+..+.+.+.
T Consensus        43 ~~~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~  116 (237)
T d1uzma1          43 APKGLFGVEVDVTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS  116 (237)
T ss_dssp             CCTTSEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             hhcCceEEEEecCCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhh
Confidence            3456888999999953      33333       2368999999997532       22345688999999988876544


Q ss_pred             HH---hccchhhcccccC
Q psy3446          78 EI---RQLKLFLRLKTEV   92 (166)
Q Consensus        78 ~~---~~~~~~~~~ss~~   92 (166)
                      ..   .+...++++||..
T Consensus       117 ~~m~~~~~g~Iv~isS~~  134 (237)
T d1uzma1         117 RSMQRNKFGRMIFIGSVS  134 (237)
T ss_dssp             HHHHHTTCEEEEEECCCC
T ss_pred             hcccccCCCceEEEcchh
Confidence            32   1223566676654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=94.97  E-value=0.055  Score=36.80  Aligned_cols=72  Identities=13%  Similarity=0.043  Sum_probs=47.7

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR   80 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~   80 (166)
                      +..++++|++++      ++.+++       ...+|++||+||....+       ..++..+.+|+.|+.++.+.+....
T Consensus        49 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m  122 (248)
T d2d1ya1          49 GGAFFQVDLEDE------RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREM  122 (248)
T ss_dssp             TCEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCH------HHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccc
Confidence            457889999985      333333       23689999999975322       2345688999999999888775432


Q ss_pred             ---ccchhhcccccC
Q psy3446          81 ---QLKLFLRLKTEV   92 (166)
Q Consensus        81 ---~~~~~~~~ss~~   92 (166)
                         +...+++++|..
T Consensus       123 ~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1         123 RKVGGGAIVNVASVQ  137 (248)
T ss_dssp             HTTTCEEEEEECCGG
T ss_pred             ccccccccccccccc
Confidence               123455665543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=94.97  E-value=0.015  Score=39.94  Aligned_cols=50  Identities=24%  Similarity=0.226  Sum_probs=36.5

Q ss_pred             CHHhHHHHhcc--ccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3446         114 SETDRELLRTN--VNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREIR  163 (166)
Q Consensus       114 s~~~~~~l~~~--~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~~  163 (166)
                      +....+++.++  .|+|||+||.....   .........|+.++.++++.|++.+
T Consensus        42 ~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~   96 (298)
T d1n2sa_          42 NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG   96 (298)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhccc
Confidence            34556666543  59999999965432   3456678999999999999997653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=94.94  E-value=0.04  Score=37.76  Aligned_cols=72  Identities=13%  Similarity=0.120  Sum_probs=47.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec----ch----hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR----FD----EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~----~~----~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++..+.+|++++.      +.+.+       ...+|++||+||...    +.    ..+...+++|+.|+.++.+.+..
T Consensus        54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~  127 (260)
T d1zema1          54 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR  127 (260)
T ss_dssp             SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHh
Confidence            47899999999853      33333       236899999998642    21    12355788999999988886643


Q ss_pred             H---hccchhhccccc
Q psy3446          79 I---RQLKLFLRLKTE   91 (166)
Q Consensus        79 ~---~~~~~~~~~ss~   91 (166)
                      .   .+...+++++|.
T Consensus       128 ~m~~~~~G~II~isS~  143 (260)
T d1zema1         128 QMITQNYGRIVNTASM  143 (260)
T ss_dssp             HHHHHTCEEEEEECCH
T ss_pred             hhhhhcCCCCCeeech
Confidence            2   123345666654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=94.91  E-value=0.042  Score=37.29  Aligned_cols=72  Identities=13%  Similarity=0.117  Sum_probs=48.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .+...+.+|++++.      +.+++.       ..+|+++|+|+.....       ..+...+.+|+.|+..+.+.+...
T Consensus        50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~  123 (243)
T d1q7ba_          50 ANGKGLMLNVTDPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA  123 (243)
T ss_dssp             GGEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEecCHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHH
Confidence            46789999999853      333332       2689999999875322       234567899999999888876543


Q ss_pred             h---ccchhhccccc
Q psy3446          80 R---QLKLFLRLKTE   91 (166)
Q Consensus        80 ~---~~~~~~~~ss~   91 (166)
                      .   +...++++||.
T Consensus       124 m~~~~~G~II~isS~  138 (243)
T d1q7ba_         124 MMKKRHGRIITIGSV  138 (243)
T ss_dssp             HHHHTCEEEEEECCH
T ss_pred             HHHcCCCEeeeecch
Confidence            1   22356666664

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=94.91  E-value=0.02  Score=39.49  Aligned_cols=52  Identities=19%  Similarity=0.182  Sum_probs=36.4

Q ss_pred             CccEEEEcceeecch-hhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCcc
Q psy3446          41 NVNVIFHGAATVRFD-EKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVPH   94 (166)
Q Consensus        41 ~~d~Vih~aa~~~~~-~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~~   94 (166)
                      .+++|+|+||..... .+.......|+.++.++++.++.. .. .++..|+...+
T Consensus        68 ~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i-~~v~~ss~~~~  120 (307)
T d1eq2a_          68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATY  120 (307)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGG
T ss_pred             chhhhhhhcccccccccccccccccccccccccccccccc-cc-ccccccccccc
Confidence            578999999976543 344556778899999999988874 33 35555555544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=94.80  E-value=0.038  Score=37.81  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=48.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH-
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE-   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~-   78 (166)
                      .++..+.+|++++      ++.+++.       ..+|+++|+|+.....       ..+...+.+|+.|+..+.+.+.. 
T Consensus        51 ~~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~  124 (256)
T d1k2wa_          51 PAACAIALDVTDQ------ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA  124 (256)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceEEEEeeCCCH------HHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccch
Confidence            4788999999985      3344332       3689999999975422       23456889999999988875332 


Q ss_pred             H-h--ccchhhcccccC
Q psy3446          79 I-R--QLKLFLRLKTEV   92 (166)
Q Consensus        79 ~-~--~~~~~~~~ss~~   92 (166)
                      . .  +...++++||..
T Consensus       125 ~~~~~~~g~Iv~isS~~  141 (256)
T d1k2wa_         125 MIAGGRGGKIINMASQA  141 (256)
T ss_dssp             HHHHTSCEEEEEECCGG
T ss_pred             hHHhccCCccccccchh
Confidence            1 1  223466666643

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.75  E-value=0.015  Score=38.46  Aligned_cols=102  Identities=9%  Similarity=0.060  Sum_probs=59.4

Q ss_pred             ccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhccccc--CccceeeeEeecCCCCCCCCCCCHHhHH
Q psy3446          42 VNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTE--VPHFLEKISAVAGDVSLPGLGLSETDRE  119 (166)
Q Consensus        42 ~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~--~~~~~~~~~~v~gD~~~~~~gls~~~~~  119 (166)
                      .-.|+-+||++..|.++-..+.-             ++.....+...++.  ......++..+.+|+      .+...+.
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~-------------~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~------~~~~~~~   63 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKE-------------GSDKFVAKGLVRSAQGKEKIGGEADVFIGDI------TDADSIN   63 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHH-------------TTTTCEEEEEESCHHHHHHTTCCTTEEECCT------TSHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-------------CCCcEEEEEEcCCHHHHHhccCCcEEEEeee------ccccccc
Confidence            35688999999999887443321             11111111111100  001112445566775      3445677


Q ss_pred             HHhccccEEEEccccccch----------------HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         120 LLRTNVNVIFHGAATVRFD----------------EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       120 ~l~~~~d~i~h~aa~~~~~----------------~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ++.+++|.|+|+|+.....                ........+|+.|+.++++.+...
T Consensus        64 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (252)
T d2q46a1          64 PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA  122 (252)
T ss_dssp             HHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH
T ss_pred             cccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc
Confidence            8888999999999853211                112335677999999999888654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=94.70  E-value=0.072  Score=36.31  Aligned_cols=64  Identities=20%  Similarity=0.284  Sum_probs=44.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++..|++.+.-.+ .+..+.+   ...+|+++++|+... ...++..+++|+.|+.++...+...
T Consensus        55 ~~~~~~~~d~~~~~~~~-~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~  121 (254)
T d1sbya1          55 VNITFHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDF  121 (254)
T ss_dssp             SEEEEEECCTTSCHHHH-HHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCEEEEEeecCCCHHHH-HHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            36889999998642101 1112222   346899999999754 4567788999999999888776553

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=94.60  E-value=0.09  Score=35.73  Aligned_cols=72  Identities=15%  Similarity=0.076  Sum_probs=48.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++.      +.+.+       ...+|+++|+|+....+       ..+...+++|+.|+..+.+.+...
T Consensus        54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~  127 (251)
T d1zk4a1          54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR  127 (251)
T ss_dssp             TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHH
Confidence            47899999999953      33333       23689999999975322       234568899999999988876543


Q ss_pred             h-cc---chhhccccc
Q psy3446          80 R-QL---KLFLRLKTE   91 (166)
Q Consensus        80 ~-~~---~~~~~~ss~   91 (166)
                      . +.   ..++.++|.
T Consensus       128 m~~~~~gg~Ii~isS~  143 (251)
T d1zk4a1         128 MKNKGLGASIINMSSI  143 (251)
T ss_dssp             HTTSSSCEEEEEECCG
T ss_pred             HHhcCCCCceEeeecc
Confidence            2 11   245566554

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.60  E-value=0.056  Score=36.87  Aligned_cols=72  Identities=19%  Similarity=0.127  Sum_probs=47.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .+..++.+|++++.      +.+.+       ...+|+++|+|+.....       ..++..+++|+.|+..+.+.+...
T Consensus        52 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~  125 (253)
T d1hxha_          52 ERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA  125 (253)
T ss_dssp             TTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCeEEEEeecCCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            46889999999853      33333       23689999999975321       234568899999999888766543


Q ss_pred             hc--cchhhccccc
Q psy3446          80 RQ--LKLFLRLKTE   91 (166)
Q Consensus        80 ~~--~~~~~~~ss~   91 (166)
                      ..  ...+++++|.
T Consensus       126 m~~~~G~Iv~isS~  139 (253)
T d1hxha_         126 MKETGGSIINMASV  139 (253)
T ss_dssp             HTTTCEEEEEECCG
T ss_pred             HHhcCCceecccch
Confidence            21  2345555554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.099  Score=35.52  Aligned_cols=60  Identities=17%  Similarity=0.195  Sum_probs=42.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|++++      ++.+.+.       ..+|++||+||....+       ..+...+++|+.|+..+.+.+...
T Consensus        55 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~  128 (251)
T d1vl8a_          55 VETMAFRCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL  128 (251)
T ss_dssp             CCEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence            4688999999985      3333332       3689999999975322       233557889999999988876543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=94.35  E-value=0.089  Score=35.52  Aligned_cols=62  Identities=23%  Similarity=0.164  Sum_probs=43.4

Q ss_pred             ccceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          13 LEKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        13 ~~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ..++.++.+|+++++      +++++.       .++|++||+|+.....       ..+...+++|+.+...+.+.+..
T Consensus        50 ~~~~~~~~~Dls~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~  123 (241)
T d2a4ka1          50 EAEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE  123 (241)
T ss_dssp             CSSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhcccccccccccccccccccccccc
Confidence            357889999999853      343332       3689999999865321       12345788999999988887665


Q ss_pred             Hh
Q psy3446          79 IR   80 (166)
Q Consensus        79 ~~   80 (166)
                      ..
T Consensus       124 ~~  125 (241)
T d2a4ka1         124 VL  125 (241)
T ss_dssp             HC
T ss_pred             cc
Confidence            43

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.31  E-value=0.083  Score=36.32  Aligned_cols=59  Identities=15%  Similarity=0.287  Sum_probs=41.9

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc--------hh---hHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF--------DE---KIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~--------~~---~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++..+.+|++++.      +.+.+.       ..+|++||+|+....        ..   .+...+++|+.|+..+.+.
T Consensus        57 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~  130 (272)
T d1xkqa_          57 KQVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKK  130 (272)
T ss_dssp             GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHh
Confidence            46899999999953      343332       368999999997531        11   2456788999999888876


Q ss_pred             HHH
Q psy3446          76 ARE   78 (166)
Q Consensus        76 ~~~   78 (166)
                      +..
T Consensus       131 ~~p  133 (272)
T d1xkqa_         131 VKP  133 (272)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=94.18  E-value=0.087  Score=35.99  Aligned_cols=77  Identities=17%  Similarity=0.141  Sum_probs=48.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---hc-CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---RT-NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR--   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~~-~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~--   80 (166)
                      .++.++.+|++++.- + ...++.+   .. .+|+++|+|+.....       ..+...+++|+.|+.++.+.+....  
T Consensus        57 ~~~~~~~~Dv~~~~~-v-~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~  134 (259)
T d2ae2a_          57 FKVEASVCDLSSRSE-R-QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA  134 (259)
T ss_dssp             CEEEEEECCTTCHHH-H-HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeeCCCHHH-H-HHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh
Confidence            467899999998531 0 0111222   12 489999999975321       2345688999999998887665431  


Q ss_pred             -ccchhhcccccC
Q psy3446          81 -QLKLFLRLKTEV   92 (166)
Q Consensus        81 -~~~~~~~~ss~~   92 (166)
                       ....+++++|..
T Consensus       135 ~~~G~Ii~isS~~  147 (259)
T d2ae2a_         135 SERGNVVFISSVS  147 (259)
T ss_dssp             TSSEEEEEECCGG
T ss_pred             hcccccccccccc
Confidence             223456666643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=94.12  E-value=0.099  Score=35.71  Aligned_cols=59  Identities=15%  Similarity=0.239  Sum_probs=40.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-----------hhhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----------DEKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-----------~~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .++.++.+|++++.      +.+++.       ..+|+++|+|+....           ...++..+++|+.|+..+.+.
T Consensus        57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~  130 (264)
T d1spxa_          57 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK  130 (264)
T ss_dssp             GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhh
Confidence            46899999999853      343332       368999999986421           123456788999999888876


Q ss_pred             HHH
Q psy3446          76 ARE   78 (166)
Q Consensus        76 ~~~   78 (166)
                      +..
T Consensus       131 ~~p  133 (264)
T d1spxa_         131 AVP  133 (264)
T ss_dssp             HHH
T ss_pred             hCC
Confidence            654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.12  E-value=0.066  Score=36.25  Aligned_cols=62  Identities=11%  Similarity=0.098  Sum_probs=40.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh---c--CccEEEEcceeecc--------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR---T--NVNVIFHGAATVRF--------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~---~--~~d~Vih~aa~~~~--------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++.- + ....+.+.   .  .+|++||+||...-        ...+...+++|+.|+..+.+.+.
T Consensus        51 ~~~~~~~~Dvs~~~~-v-~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  125 (250)
T d1yo6a1          51 SRVHVLPLTVTCDKS-L-DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             TTEEEEECCTTCHHH-H-HHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CceEEEEEecCCHHH-H-HHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence            579999999998531 0 01111221   1  38999999996421        11245688999999988877653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.08  E-value=0.017  Score=38.07  Aligned_cols=54  Identities=13%  Similarity=-0.029  Sum_probs=40.7

Q ss_pred             hcCccEEEEcceeecc-hhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccccCc
Q psy3446          39 RTNVNVIFHGAATVRF-DEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKTEVP   93 (166)
Q Consensus        39 ~~~~d~Vih~aa~~~~-~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss~~~   93 (166)
                      ...+|.|||++|.... ......+...|+.++.++.+.|++ .+.+.|.++|+...
T Consensus        60 ~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~~i~~Ss~~~  114 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALE-MGARHYLVVSALGA  114 (212)
T ss_dssp             CSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred             ccchheeeeeeeeeccccccccccccchhhhhhhccccccc-cccccccccccccc
Confidence            3457999999886532 223345788999999999999987 56778888887654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.11  Score=35.32  Aligned_cols=58  Identities=17%  Similarity=0.134  Sum_probs=41.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++      ++.+++       ...+|++||+|+....       ...+...+.+|+.|...+...+.
T Consensus        61 ~~~~~~~~Dls~~------~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~  132 (257)
T d1xg5a_          61 GTLIPYRCDLSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY  132 (257)
T ss_dssp             SEEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ceEEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHH
Confidence            4788999999995      334333       2368999999997542       22345688899999988776653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.11  Score=36.20  Aligned_cols=59  Identities=8%  Similarity=0.119  Sum_probs=42.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++..+.+|+++++      +.+.+       ...+|++||+|+....       ...+...+++|+.|+..+.+.+..
T Consensus        66 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~  138 (297)
T d1yxma1          66 ARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS  138 (297)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEeccCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHH
Confidence            47899999999953      33333       2368999999986532       123456889999999988876643

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.96  E-value=0.14  Score=34.52  Aligned_cols=59  Identities=24%  Similarity=0.216  Sum_probs=41.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      +++++.+|+++++      +.+++       ...+|++||+|+.....       ..+...+++|+.|+.++.+.+...
T Consensus        50 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~  122 (242)
T d1ulsa_          50 GAHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEA  122 (242)
T ss_dssp             TCEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEecCCHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccc
Confidence            5788999999853      34333       23689999999975321       234568899999999888766543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=93.95  E-value=0.11  Score=35.46  Aligned_cols=59  Identities=20%  Similarity=0.144  Sum_probs=42.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      +.+++.       ..+|+++|+|+.....       ..+...+++|+.|+..+.+.+..
T Consensus        57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (261)
T d1geea_          57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK  129 (261)
T ss_dssp             CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhh
Confidence            46889999999953      344332       3689999999975422       23456789999999988876543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.93  E-value=0.14  Score=34.51  Aligned_cols=72  Identities=15%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH----
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI----   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~----   79 (166)
                      .++..+.+|++++      +..+++.+   .+|+++|+|+.....       ..++..+++|+.|+..+.+.+...    
T Consensus        50 ~~~~~~~~Dv~~~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~  123 (242)
T d1cyda_          50 PGIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR  123 (242)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCCCH------HHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh
Confidence            4688999999985      34566655   589999999975422       233567899999999888765431    


Q ss_pred             hccchhhccccc
Q psy3446          80 RQLKLFLRLKTE   91 (166)
Q Consensus        80 ~~~~~~~~~ss~   91 (166)
                      .....++.++|.
T Consensus       124 ~~~g~ii~isS~  135 (242)
T d1cyda_         124 GVPGSIVNVSSM  135 (242)
T ss_dssp             TCCEEEEEECCG
T ss_pred             cccCcccccchh
Confidence            122345555554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=93.85  E-value=0.13  Score=35.14  Aligned_cols=59  Identities=24%  Similarity=0.289  Sum_probs=42.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecch---------hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRFD---------EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~~---------~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|++++      ++++.+.       ..+|++||+|+.....         ..++..+.+|+.|+..+.+.+.
T Consensus        54 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~  127 (268)
T d2bgka1          54 DVISFVHCDVTKD------EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA  127 (268)
T ss_dssp             TTEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEccCCCH------HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence            4688899999985      3344432       3689999999964321         2345578899999999887665


Q ss_pred             H
Q psy3446          78 E   78 (166)
Q Consensus        78 ~   78 (166)
                      .
T Consensus       128 ~  128 (268)
T d2bgka1         128 R  128 (268)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=93.49  E-value=0.081  Score=36.47  Aligned_cols=59  Identities=15%  Similarity=0.230  Sum_probs=41.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch------------hhHHHHHHhhhhcHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD------------EKIQLAVAINVLGVRAMLE   74 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~------------~~~~~~~~~nv~gt~~ll~   74 (166)
                      .++..+.+|++++.      +.+.+       ...+|+++|+|+.....            ..++..+++|+.|+..+.+
T Consensus        51 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~  124 (276)
T d1bdba_          51 DNVLGIVGDVRSLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK  124 (276)
T ss_dssp             GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCeeEEecccccHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence            57899999999953      33333       23689999999964321            1256678999999988877


Q ss_pred             HHHH
Q psy3446          75 LARE   78 (166)
Q Consensus        75 l~~~   78 (166)
                      .+..
T Consensus       125 ~~~p  128 (276)
T d1bdba_         125 ACLP  128 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.14  Score=35.37  Aligned_cols=72  Identities=18%  Similarity=0.155  Sum_probs=48.6

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc-----CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT-----NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI--   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~-----~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~--   79 (166)
                      .++..+.+|++++      ++...+.+     .+|++++.|+....+       ..+...+++|+.|+.++.+.+...  
T Consensus        57 ~~~~~~~~Dv~~~------~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~  130 (285)
T d1jtva_          57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK  130 (285)
T ss_dssp             TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceEEEeccccch------HhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHH
Confidence            4789999999995      33444432     479999999976432       233557889999999888765432  


Q ss_pred             -hccchhhccccc
Q psy3446          80 -RQLKLFLRLKTE   91 (166)
Q Consensus        80 -~~~~~~~~~ss~   91 (166)
                       .+...++++||.
T Consensus       131 ~~~~G~Iv~isS~  143 (285)
T d1jtva_         131 RRGSGRVLVTGSV  143 (285)
T ss_dssp             HHTCEEEEEEEEG
T ss_pred             HcCCCceEEEech
Confidence             122345666664

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.2  Score=33.75  Aligned_cols=72  Identities=14%  Similarity=0.153  Sum_probs=48.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhc---CccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHH-Hh--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRT---NVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELARE-IR--   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~---~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~-~~--   80 (166)
                      .++..+.+|++++      +..+++.+   ++|+++|+|+.....       ..+...+++|+.|+..+.+.+.. ..  
T Consensus        52 ~~~~~~~~Dv~d~------~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~  125 (244)
T d1pr9a_          52 PGIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR  125 (244)
T ss_dssp             TTCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCCCH------HHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh
Confidence            4578999999985      34555554   589999999975432       23355789999999888776543 21  


Q ss_pred             -ccchhhccccc
Q psy3446          81 -QLKLFLRLKTE   91 (166)
Q Consensus        81 -~~~~~~~~ss~   91 (166)
                       ....++.++|.
T Consensus       126 ~~~g~Ii~isS~  137 (244)
T d1pr9a_         126 GVPGAIVNVSSQ  137 (244)
T ss_dssp             TCCEEEEEECCG
T ss_pred             CCcceEeecccc
Confidence             22345555554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.33  E-value=0.15  Score=34.73  Aligned_cols=77  Identities=12%  Similarity=0.149  Sum_probs=45.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---h-cCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh--
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---R-TNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR--   80 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~-~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~--   80 (166)
                      .++..+.+|++++.- + ...++.+   . ..+|+++|+|+.....       ..++..+++|+.|+..+.+.+....  
T Consensus        57 ~~~~~~~~Dv~~~~~-v-~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~  134 (259)
T d1xq1a_          57 FQVTGSVCDASLRPE-R-EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA  134 (259)
T ss_dssp             CCEEEEECCTTSHHH-H-HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeccCCCHHH-H-HHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc
Confidence            468999999998531 0 1111222   1 2489999999975422       2345688999999998887665431  


Q ss_pred             -ccchhhcccccC
Q psy3446          81 -QLKLFLRLKTEV   92 (166)
Q Consensus        81 -~~~~~~~~ss~~   92 (166)
                       +...+++++|..
T Consensus       135 ~~~G~Iv~isS~~  147 (259)
T d1xq1a_         135 SGCGNIIFMSSIA  147 (259)
T ss_dssp             HSSCEEEEEC---
T ss_pred             ccccccccccccc
Confidence             223466666543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.26  E-value=0.13  Score=34.64  Aligned_cols=63  Identities=11%  Similarity=0.053  Sum_probs=41.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH---h--cCccEEEEcceeecch-----h---hHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL---R--TNVNVIFHGAATVRFD-----E---KIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~---~--~~~d~Vih~aa~~~~~-----~---~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.- + +...+.+   .  ..+|+++|+|+.....     .   .+...+++|+.|+..+.+.+..
T Consensus        53 ~~~~~~~~Dvs~~~~-v-~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p  128 (248)
T d1snya_          53 SNIHILEIDLRNFDA-Y-DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP  128 (248)
T ss_dssp             TTEEEEECCTTCGGG-H-HHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CcEEEEEEEeccHHH-H-HHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHH
Confidence            479999999999642 1 1112221   1  3589999999964321     1   2345788999999888776543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.12  E-value=0.2  Score=34.30  Aligned_cols=59  Identities=24%  Similarity=0.304  Sum_probs=41.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-----h----hhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-----D----EKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-----~----~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++..+.+|++++.      +.+++.       ..+|+++|+|+....     .    ..+...+++|+.|+..+.+.+.
T Consensus        56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~  129 (274)
T d1xhla_          56 EKINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTK  129 (274)
T ss_dssp             GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cceEEEEeeCCCHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccc
Confidence            47899999999953      333332       368999999985421     1    2345678999999998887665


Q ss_pred             H
Q psy3446          78 E   78 (166)
Q Consensus        78 ~   78 (166)
                      .
T Consensus       130 ~  130 (274)
T d1xhla_         130 E  130 (274)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=92.98  E-value=0.19  Score=34.15  Aligned_cols=58  Identities=19%  Similarity=0.113  Sum_probs=41.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh-------cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELAR   77 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~-------~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~   77 (166)
                      .++.++.+|+++++      +.+++.       ..+|+++|+|+....       ...++..+.+|+.|+..+.+.+.
T Consensus        59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~  130 (260)
T d1h5qa_          59 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA  130 (260)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhc
Confidence            46889999999953      343332       368999999986532       12345688999999988877554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.82  E-value=0.075  Score=34.75  Aligned_cols=42  Identities=17%  Similarity=0.003  Sum_probs=32.2

Q ss_pred             HhccccEEEEcccccc-chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         121 LRTNVNVIFHGAATVR-FDEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       121 l~~~~d~i~h~aa~~~-~~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +...+|.++|+++... .......+...|+.++.+++++|++.
T Consensus        59 ~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  101 (212)
T d2a35a1          59 LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM  101 (212)
T ss_dssp             CCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             cccchheeeeeeeeeccccccccccccchhhhhhhcccccccc
Confidence            3345799999987653 23345668899999999999999875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=92.71  E-value=0.09  Score=36.43  Aligned_cols=48  Identities=10%  Similarity=0.026  Sum_probs=34.7

Q ss_pred             HHhHHHHh--ccccEEEEccccccc----hHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         115 ETDRELLR--TNVNVIFHGAATVRF----DEKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       115 ~~~~~~l~--~~~d~i~h~aa~~~~----~~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      ......+.  ...|.|+|+|+.+..    ..+...+...|+.||.++++.|.+.
T Consensus        43 ~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~   96 (315)
T d1e6ua_          43 SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN   96 (315)
T ss_dssp             HHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            34454443  347999999976543    2345557788999999999999876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=92.28  E-value=0.28  Score=33.29  Aligned_cols=73  Identities=14%  Similarity=0.175  Sum_probs=47.1

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------h-cCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------R-TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~-~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      .++.++.+|++++.      +++++       . ..+|+++|+|+....       ...+...+++|+.++..+.+.+..
T Consensus        55 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~  128 (258)
T d1ae1a_          55 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP  128 (258)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCceEEEeecCCHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccc
Confidence            45788999999953      23222       2 247999999997541       234466889999999888776543


Q ss_pred             H---hccchhhcccccC
Q psy3446          79 I---RQLKLFLRLKTEV   92 (166)
Q Consensus        79 ~---~~~~~~~~~ss~~   92 (166)
                      .   .....+++++|..
T Consensus       129 ~m~~~~~g~ii~isS~~  145 (258)
T d1ae1a_         129 LLKASQNGNVIFLSSIA  145 (258)
T ss_dssp             HHHHHTSEEEEEECCGG
T ss_pred             ccccccccccccccccc
Confidence            2   2233455555543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.04  E-value=0.25  Score=33.44  Aligned_cols=60  Identities=15%  Similarity=0.154  Sum_probs=41.5

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHh----c-------CccEEEEcceeec------ch----hhHHHHHHhhhhcHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLR----T-------NVNVIFHGAATVR------FD----EKIQLAVAINVLGVRAM   72 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~----~-------~~d~Vih~aa~~~------~~----~~~~~~~~~nv~gt~~l   72 (166)
                      .++.++.+|++++      ++.+++.    +       .+|++++.|+...      +.    ..+...+.+|+.|+..+
T Consensus        60 ~~~~~~~~Dvs~~------~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l  133 (259)
T d1oaaa_          60 LKVVLAAADLGTE------AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCL  133 (259)
T ss_dssp             SEEEEEECCTTSH------HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHH
T ss_pred             ceEEEEEccCCCH------HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHH
Confidence            3689999999995      3344442    1       3578999988642      11    23456889999999998


Q ss_pred             HHHHHHH
Q psy3446          73 LELAREI   79 (166)
Q Consensus        73 l~l~~~~   79 (166)
                      .+.+...
T Consensus       134 ~~~~~~~  140 (259)
T d1oaaa_         134 TSGTLNA  140 (259)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            8877653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.44  E-value=0.23  Score=33.87  Aligned_cols=62  Identities=10%  Similarity=-0.005  Sum_probs=44.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.||++++      +.+.....+.+.++|+++....        ..|..++.++++.+++... ..+...|+
T Consensus        54 ~~v~~v~~d~~d~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~~~-~~~v~~Ss  115 (312)
T d1qyda_          54 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEAGN-IKRFLPSE  115 (312)
T ss_dssp             TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHSCC-CSEEECSC
T ss_pred             CCcEEEEeecccc------hhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHhcC-CcEEEEee
Confidence            4689999999984      4567778899999999886432        3466777888888877433 34444454

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=91.25  E-value=0.24  Score=33.58  Aligned_cols=60  Identities=13%  Similarity=0.140  Sum_probs=42.7

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++..+.+|++++.      +.+.+       ...+|++||+|+.....       ..++..+.+|+.+..++.+.+-..
T Consensus        56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (259)
T d1ja9a_          56 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  129 (259)
T ss_dssp             CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEecCCCCCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence            46889999999843      33332       23689999999976322       233557889999998888877654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.29  E-value=0.9  Score=30.06  Aligned_cols=59  Identities=12%  Similarity=-0.012  Sum_probs=39.8

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecc-------hhhHHHHHHhhhhcHHHHHHHHHH
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE   78 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~-------~~~~~~~~~~nv~gt~~ll~l~~~   78 (166)
                      ..+++.+|+++.     .+...+-..++|+++|+|+....       ...+...+++|+.++..+.+.+..
T Consensus        45 ~~~~~~~Dv~~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  110 (234)
T d1o5ia_          45 GHRYVVCDLRKD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP  110 (234)
T ss_dssp             CSEEEECCTTTC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCcEEEcchHHH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccc
Confidence            346788999874     22333444679999999986432       123355788999999888776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.83  E-value=1.5  Score=29.03  Aligned_cols=49  Identities=24%  Similarity=0.302  Sum_probs=34.6

Q ss_pred             CHHhHHHHhc--cccEEEEccccccch---HHHHHHHHHHHHHHHHHHHHHHHh
Q psy3446         114 SETDRELLRT--NVNVIFHGAATVRFD---EKIQLAVAINVLGVRAMLELAREI  162 (166)
Q Consensus       114 s~~~~~~l~~--~~d~i~h~aa~~~~~---~~~~~~~~~Nv~G~~~~l~~a~~~  162 (166)
                      +....+++++  ..|+|+|+|+.....   .........|+.++..+++.+...
T Consensus        40 d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~   93 (281)
T d1vl0a_          40 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV   93 (281)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc
Confidence            3455566654  469999999975432   234557788999999888888765

>d2fg1a1 c.50.1.2 (A:2-155) Hypothetical protein BT1257 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: Macro domain-like
superfamily: Macro domain-like
family: Macro domain
domain: Hypothetical protein BT1257
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=86.25  E-value=0.26  Score=30.52  Aligned_cols=27  Identities=30%  Similarity=0.415  Sum_probs=21.5

Q ss_pred             ceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceee
Q psy3446          15 KISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATV   52 (166)
Q Consensus        15 ~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~   52 (166)
                      +|+++.||++++.           .+++|+|+|.+-..
T Consensus         1 ~i~~v~GDi~~~~-----------~~~~~~Ivh~~N~~   27 (154)
T d2fg1a1           1 EILYIKGDATAPI-----------GSGVKVITHICNDI   27 (154)
T ss_dssp             CCEEEESCTTSCC-----------SSSCEEEEEEEETT
T ss_pred             CeEEEeCccCCcC-----------CCCCCEEEEccCCC
Confidence            5889999999874           24679999988764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=85.16  E-value=1.7  Score=29.31  Aligned_cols=60  Identities=17%  Similarity=0.209  Sum_probs=43.0

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREI   79 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~   79 (166)
                      .++.++.+|+++++      +...+       ...+|+++|.|+.....       ..+...+.+|+.|+..+.+.+...
T Consensus        68 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~  141 (272)
T d1g0oa_          68 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH  141 (272)
T ss_dssp             CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CceeeEeCCCCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence            46889999999853      33333       23689999999976422       233457889999999988877654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=84.02  E-value=0.99  Score=30.32  Aligned_cols=38  Identities=24%  Similarity=0.441  Sum_probs=31.1

Q ss_pred             ccccEEEEccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446         123 TNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus       123 ~~~d~i~h~aa~~~~~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ..+|+++++|+... ....+..+.+|+.|+..+...+..
T Consensus        83 g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~  120 (254)
T d1sbya1          83 KTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILD  120 (254)
T ss_dssp             SCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence            57899999999754 566778899999999998776654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=83.81  E-value=1.5  Score=30.41  Aligned_cols=62  Identities=6%  Similarity=0.021  Sum_probs=40.8

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.||++++     .+.+..+...++.+++......         ..++..+.++++.+.+. +..+++..|+
T Consensus        49 ~~v~~~~gD~~d~-----~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss  110 (350)
T d1xgka_          49 PNVTLFQGPLLNN-----VPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSS  110 (350)
T ss_dssp             TTEEEEESCCTTC-----HHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEE
T ss_pred             CCCEEEEeeCCCc-----HHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEee
Confidence            4799999999985     3446677788898887654321         13445667788888764 4444445554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=83.77  E-value=3.1  Score=27.41  Aligned_cols=58  Identities=17%  Similarity=0.251  Sum_probs=39.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +..++..|++++      .+.+++       ...+|+++|+|+...+       ...+...+.+|+.|+..+.+.+..
T Consensus        58 ~~~~~~~Dvt~~------~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  129 (240)
T d2bd0a1          58 LTDTITADISDM------ADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFA  129 (240)
T ss_dssp             EEEEEECCTTSH------HHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEecCCCH------HHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhH
Confidence            556677887553      223322       2468999999996331       234666889999999988877654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=82.86  E-value=3.2  Score=27.45  Aligned_cols=58  Identities=22%  Similarity=0.303  Sum_probs=39.5

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +..++..|++++      .+.+++.       ..+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        52 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~  123 (244)
T d1edoa_          52 QAITFGGDVSKE------ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK  123 (244)
T ss_dssp             EEEEEECCTTSH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEeCCCCCH------HHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHH
Confidence            556777887543      3333332       468999999986431       134666889999999998877755

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=82.75  E-value=2  Score=28.54  Aligned_cols=59  Identities=17%  Similarity=0.220  Sum_probs=39.2

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHH-------hcCccEEEEcceeec-------c-h---hhHHHHHHhhhhcHHHHHHH
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVR-------F-D---EKIQLAVAINVLGVRAMLEL   75 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~-------~~~~d~Vih~aa~~~-------~-~---~~~~~~~~~nv~gt~~ll~l   75 (166)
                      .+..++.+|++++      ++.+.+       ...+|+++|+|+...       + .   ..+...+++|+.++..+.+.
T Consensus        58 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  131 (256)
T d1ulua_          58 GGALLFRADVTQD------EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARR  131 (256)
T ss_dssp             TCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CcccccccccCCH------HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHH
Confidence            3577899999995      334433       236899999998632       1 1   12344678899888877765


Q ss_pred             HHH
Q psy3446          76 ARE   78 (166)
Q Consensus        76 ~~~   78 (166)
                      +..
T Consensus       132 ~~~  134 (256)
T d1ulua_         132 AEP  134 (256)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.79  E-value=1.7  Score=29.99  Aligned_cols=74  Identities=9%  Similarity=0.025  Sum_probs=44.9

Q ss_pred             eEEEecCCCCCCCCCCHHhHHHH---hcCccEEEEcceeecch-------hhHHHHHHhhhhcHHHHHHHHHHHh---cc
Q psy3446          16 ISAVAGDVSLPGLGLSETDRELL---RTNVNVIFHGAATVRFD-------EKIQLAVAINVLGVRAMLELAREIR---QL   82 (166)
Q Consensus        16 ~~~~~gDl~~~~~gl~~~~~~~~---~~~~d~Vih~aa~~~~~-------~~~~~~~~~nv~gt~~ll~l~~~~~---~~   82 (166)
                      ...+..|+++..- . +..++.+   ..++|++||+||....+       ..++..+++|+.|+.++.+.+....   +.
T Consensus        64 ~~~~~~d~~~~~~-~-~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~  141 (302)
T d1gz6a_          64 GGKAVANYDSVEA-G-EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY  141 (302)
T ss_dssp             TCEEEEECCCGGG-H-HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ccccccccchHHH-H-HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCC
Confidence            4456677777531 0 1122222   23689999999975321       2345688999999998888764432   22


Q ss_pred             chhhccccc
Q psy3446          83 KLFLRLKTE   91 (166)
Q Consensus        83 ~~~~~~ss~   91 (166)
                      ..++++||.
T Consensus       142 G~IV~isS~  150 (302)
T d1gz6a_         142 GRIIMTASA  150 (302)
T ss_dssp             EEEEEECCH
T ss_pred             cEEEEeCCh
Confidence            356666663

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.70  E-value=0.36  Score=33.23  Aligned_cols=58  Identities=19%  Similarity=0.241  Sum_probs=38.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-----ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-----TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-----~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++..+..|++++      .+.+++.     ..+|+++++|+....       .......+.+|+.|+..+.+.+..
T Consensus        58 ~~~~~~~Dv~~~------~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp  127 (285)
T d1jtva_          58 SLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLP  127 (285)
T ss_dssp             SEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEeccccch------HhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHH
Confidence            556677787542      3334332     358999999985332       124566889999999988877643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=81.54  E-value=3.7  Score=27.16  Aligned_cols=58  Identities=22%  Similarity=0.190  Sum_probs=39.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|++++      .+.+++       ...+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        53 ~~~~~~~Dvs~~------~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~  124 (247)
T d2ew8a1          53 RVLTVKCDVSQP------GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP  124 (247)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEeeCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHh
Confidence            556777887543      333333       2469999999996332       134666889999999998877654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=80.71  E-value=4.3  Score=26.95  Aligned_cols=58  Identities=19%  Similarity=0.117  Sum_probs=39.3

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|++++      .+.+++.       ..+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        56 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  127 (260)
T d1x1ta1          56 KVLYDGADLSKG------EAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALP  127 (260)
T ss_dssp             CEEEECCCTTSH------HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEECCCCCH------HHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhh
Confidence            566778887543      3333332       468999999996321       234666889999999988776654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.28  E-value=3.2  Score=27.55  Aligned_cols=58  Identities=28%  Similarity=0.146  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHH-------hccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELL-------RTNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l-------~~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +..++..|++++      .+.+++       ...+|+++|+|+....       ...+...+.+|+.|+..+.+.+..
T Consensus        51 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~  122 (255)
T d1gega_          51 HAVAVKVDVSDR------DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE  122 (255)
T ss_dssp             CEEEEECCTTSH------HHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEeeCCCH------HHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcc
Confidence            456677887543      233332       2469999999985321       123566889999999988877643

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.21  E-value=4.9  Score=26.71  Aligned_cols=58  Identities=17%  Similarity=0.127  Sum_probs=39.4

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      ++.++..|++.+      .+.+++.       ..+|+++|+|+....       .......+.+|+.|+..+.+.+..
T Consensus        62 ~~~~~~~Dls~~------~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~  133 (257)
T d1xg5a_          62 TLIPYRCDLSNE------EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQ  133 (257)
T ss_dssp             EEEEEECCTTCH------HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             eEEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHH
Confidence            666778887543      3333322       468999999986421       334666889999999887776543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.05  E-value=3.5  Score=27.40  Aligned_cols=58  Identities=17%  Similarity=0.171  Sum_probs=38.6

Q ss_pred             eeEeecCCCCCCCCCCCHHhHHHHh-------ccccEEEEccccccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3446          98 KISAVAGDVSLPGLGLSETDRELLR-------TNVNVIFHGAATVRF-------DEKIQLAVAINVLGVRAMLELARE  161 (166)
Q Consensus        98 ~~~~v~gD~~~~~~gls~~~~~~l~-------~~~d~i~h~aa~~~~-------~~~~~~~~~~Nv~G~~~~l~~a~~  161 (166)
                      +...+..|++++      .+.+++.       ..+|+++|+|+....       ...+...+.+|+.|+..+.+.+..
T Consensus        56 ~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~  127 (251)
T d1vl8a_          56 ETMAFRCDVSNY------EEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFS  127 (251)
T ss_dssp             CEEEEECCTTCH------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cEEEEEccCCCH------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhh
Confidence            455677887543      3333322       469999999995321       124566889999999998887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=80.01  E-value=2.3  Score=28.14  Aligned_cols=58  Identities=10%  Similarity=0.094  Sum_probs=38.3

Q ss_pred             cceEEEecCCCCCCCCCCHHhHHHHhcCccEEEEcceeecchhhHHHHHHhhhhcHHHHHHHHHHHhccchhhcccc
Q psy3446          14 EKISAVAGDVSLPGLGLSETDRELLRTNVNVIFHGAATVRFDEKIQLAVAINVLGVRAMLELAREIRQLKLFLRLKT   90 (166)
Q Consensus        14 ~~~~~~~gDl~~~~~gl~~~~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~nv~gt~~ll~l~~~~~~~~~~~~~ss   90 (166)
                      .+++++.+|+.++      .........++.|+|+++..            +..++.++++.+... ....+.+.|+
T Consensus        55 ~~~~~~~~d~~~~------~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~  112 (307)
T d1qyca_          55 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSE  112 (307)
T ss_dssp             TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSC
T ss_pred             CCcEEEEeecccc------hhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeec
Confidence            3689999999885      34566678899999998753            344555666666653 3344444544