Psyllid ID: psy3619

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
Protein Sequence
MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccEEcccccccEEcccccccccccccccccccccccccEEccccccEEEEccccccccccccccccccccccccccEEEcccccEEEcccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccccccccccccEEcccccccEEEEEcccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccEEEEcccccEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccEEEcccccEEEEcccccccccccccccHHHHcccccccEEEEEccEEEEEccccEEcccccEEccccccccccccccEEEEcccccEEEEccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccEEEcccccEEEEccccccccccccccccccccccccccccccccccccEEEEccccccccEcccccccccccccccccEcccccccEEEEccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccEEccccccEEEEccccccccccccccccc
Coil and Loop (DISEMBL)
mcdqktlwtpsslvpdcvsedtqqaDYHIVASIAYRANGavanlclkptfisptplfpvindtpndsipgtctdlvggfscscdlgftgkhcqhliddcasepcqnggscvdmldgfmcqcrpgfvglqceadideclsdpcspegtdkcldldnkfqcecnvgytgvmcetniddcksnpclnggicrdgvakftcdcppgwtgsrcekdigsctnmpcqndanciDLFQdffcvsshsvqgrrpliqahssgvqvslfPELQDAFLAFHEYatindgqwHHVAIVWTQGTLTLITEGLIAgkvenygsgkslpqygwvvlgkprpdnikayteagfegklTKVQIWNRALDFTNEIQKQVRdcrtepvlhtgLVLTwtgyddinggvervvpshcsqhicppgytgpecdqltvdk
Flexible Loop (DISEMBL)
mcdqktlwtpsslvpdcVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKqvrdcrtepvlHTGLVLTWTGYDDINGGVERVVPSHCSqhicppgytgpecdQLTVDK
Low Complexity Region (SEG)
MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK
Disordered region (IsUnstruct)
************LVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYT***********
Disordered Region (DISOPRED)
MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK
Disordered Region (DISEMBL)
*********PSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK
Disordered Region (DISPRO)
MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECD******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	418	2.2.26 [Sep-21-2011]
A2AVA0	3567	Sushi, von Willebrand fac	yes	N/A	0.755	0.088	0.308	2e-46
Q4LDE5	3571	Sushi, von Willebrand fac	yes	N/A	0.751	0.087	0.328	4e-44
P10079	1064	Fibropellin-1 OS=Strongyl	no	N/A	0.708	0.278	0.342	1e-43
P0C6B8	3564	Sushi, von Willebrand fac	yes	N/A	0.755	0.088	0.308	1e-43
P49013	570	Fibropellin-3 OS=Strongyl	no	N/A	0.409	0.3	0.494	1e-41
P07207	2703	Neurogenic locus Notch pr	no	N/A	0.392	0.060	0.497	1e-40
O35516	2470	Neurogenic locus notch ho	no	N/A	0.413	0.070	0.451	1e-39
P46530	2437	Neurogenic locus notch ho	no	N/A	0.411	0.070	0.454	2e-39
Q04721	2471	Neurogenic locus notch ho	no	N/A	0.416	0.070	0.441	4e-39
Q9QW30	2471	Neurogenic locus notch ho	no	N/A	0.413	0.070	0.451	2e-38

>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus GN=Svep1 PE=1 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 174/382 (45%), Gaps = 66/382 (17%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D VGGF+C C LG++G+ C+  I++C S PC N G+C D L  + C C  G++G+ 
Sbjct: 1243 GICRDQVGGFTCECSLGYSGQICEENINECISSPCLNKGTCTDGLASYRCTCVKGYMGVH 1302

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE D++EC S PC       C D    F C+C  G+ G  CE N+D+C S PC NG  C+
Sbjct: 1303 CETDVNECQSSPCLNNAV--CKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGATCK 1360

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC-----VSSHSVQGR 244
            DG   F C CP G+TG+ CE +I  C + PC+N A C+D    + C      S H  +  
Sbjct: 1361 DGANSFRCQCPAGFTGTHCELNINECQSNPCRNQATCVDELNSYSCKCQPGFSGHRCETE 1420

Query: 245  RPL---IQAHSSGVQV-----SLFPELQDAFLAFH-------------EYA--------- 274
            +P    +    SG+        + P L     AF               YA         
Sbjct: 1421 QPSGFNLDFEVSGIYGYVLLDGVLPTLHAITCAFWMKSSDVINYGTPISYALEDDKDNTF 1480

Query: 275  ----------------------TINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGS 310
                                  ++NDG WHH+AI WT   G   +  +G ++        
Sbjct: 1481 LLTDYNGWVLYVNGKEKITNCPSVNDGIWHHIAITWTSTGGAWRVYIDGELSDGGTGLSI 1540

Query: 311  GKSLPQYGWVVLGKPRPDNIKAYTEA-GFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEP 369
            GK++P  G +VLG+ +    + +  A  F G ++++ +W+  L    +++     C  E 
Sbjct: 1541 GKAIPGGGALVLGQEQDKKGEGFNPAESFVGSISQLNLWDYVLS-PQQVKLLASSCPEE- 1598

Query: 370  VLHTGLVLTWTGY-DDINGGVE 390
             L  G VL W  +   I G V+
Sbjct: 1599 -LSRGNVLAWPDFLSGITGKVK 1619

May play a role in the cell attachment process.
Mus musculus (taxid: 10090)

>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3

 Score =  179 bits (454), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 178/347 (51%), Gaps = 33/347 (9%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D V G+ C+C  GF G HC+  +++C S PC N   C D + GF+C+C PGF+G +
Sbjct: 1282 GICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCEDQVGGFLCKCPPGFLGTR 1341

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            C  ++DECLS PC    T  C D  N F+C C  G+TG  CE NI++C+SNPC N   C 
Sbjct: 1342 CGKNVDECLSQPCKNGAT--CKDGANSFRCLCAAGFTGSHCELNINECQSNPCRNQATCV 1399

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQD------------FFCVS 237
            D +  ++C C PG++G RCE +  +  N+  +       +  D            F+  S
Sbjct: 1400 DELNSYSCKCQPGFSGKRCETEQSTGFNLDFEVSGIYGYVMLDGMLPSLHALTCTFWMKS 1459

Query: 238  SHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAF---HEYAT----INDGQWHHVAIVWTQ 290
            S  +    P+  A  +G   +L     + ++ +    E  T    +NDG+WHH+AI WT 
Sbjct: 1460 SDDMNYGTPISYAVDNGSDNTLLLTDYNGWVLYVNGREKITNCPSVNDGRWHHIAITWT- 1518

Query: 291  GTLTLITEGLIAGKVENYGSGKS----LPQYGWVVLGKPRPDNIKAYTEA-GFEGKLTKV 345
             +   I +  I GK+ + G+G S    +P  G +VLG+ +    + ++ A  F G ++++
Sbjct: 1519 -SANGIWKVYIDGKLSDGGAGLSVGLPIPGGGALVLGQEQDKKGEGFSPAESFVGSISQL 1577

Query: 346  QIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERV 392
             +W+  L    +++     C  E  L  G VL W   D ++G V +V
Sbjct: 1578 NLWDYVLS-PQQVKSLATSCPEE--LSKGNVLAWP--DFLSGIVGKV 1619

May play a role in the cell attachment process.

Homo sapiens (taxid: 9606)

>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2

 Score =  177 bits (450), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 157/324 (48%), Gaps = 28/324 (8%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D V G+ C+C  G+TG +C+  ID+CAS PC NGG+C++M++G+ CQC  G+ G+ 
Sbjct: 721  GVCVDGVNGYVCNCAPGYTGDNCETEIDECASMPCLNGGACIEMVNGYTCQCVAGYTGVI 780

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE DIDEC S PC   G   C D  N + C C  G+TG  CETNID+C S+PCLNGGIC 
Sbjct: 781  CETDIDECASAPCQNGGV--CTDTINGYICACVPGFTGSNCETNIDECASDPCLNGGICV 838

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQ 249
            DGV  F C CPP ++G+ CE  + +C +MPCQN A C+++  D+ C       G+   I 
Sbjct: 839  DGVNGFVCQCPPNYSGTYCEISLDACRSMPCQNGATCVNVGADYVCECVPGYAGQNCEID 898

Query: 250  AHSSGVQVSLFPELQDAFLAFHE------YATIN---------DGQWHHVAIVWTQGTLT 294
             +           L    +A +       Y  +N         +G W++      Q T+T
Sbjct: 899  INECASLPCQNGGLCIDGIAGYTCQCRLGYIGVNCEEVGFCDLEGMWYNEC--NDQVTIT 956

Query: 295  LITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDF 354
              + G++ G    Y             LG   P  +  Y    ++       +       
Sbjct: 957  KTSTGMMLGDYMTYNE---------RALGYAAPTVVVGYASNNYDFPSFGFTVVRDNGQS 1007

Query: 355  TNEIQKQVRDCRTEPVLHTGLVLT 378
            T     Q   C  E VL+T  + T
Sbjct: 1008 TTSWTGQCHLCDGEEVLYTTWINT 1031

Forms the apical lamina, a component of the extracellular matrix.

Strongylocentrotus purpuratus (taxid: 7668)

>sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus GN=Svep1 PE=1 SV=1

 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 28/344 (8%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            GTCTD +  + C+C  G+ G HC+  +++C S PC N   C D + GF C+C PGF+G +
Sbjct: 1277 GTCTDGLASYRCTCVSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTR 1336

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE ++DECLS PC    T  C D  N F+C+C  G+TG  CE NI++C+SNPC N   C 
Sbjct: 1337 CEKNVDECLSQPCQNGAT--CKDGANSFRCQCPAGFTGPHCELNINECQSNPCRNQATCV 1394

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQ----GRR 245
            D +  ++C C PG++G RCE +  S  N+  +       +  D    + H++      + 
Sbjct: 1395 DELNSYSCKCRPGFSGRRCETEQPSGFNLDFEVSGIYGYVLLDGVLPTLHAITCAFWMKS 1454

Query: 246  PLIQAHSSGVQVSLFPELQDAFL---------------AFHEYATINDGQWHHVAIVWTQ 290
              +  + + +  +L     + FL                     ++NDG WHH+AI WT 
Sbjct: 1455 SDVINYGTPISYALEGNKDNTFLLTDYNGWVLYVNGKEKITNCPSVNDGIWHHIAITWTS 1514

Query: 291  --GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEA-GFEGKLTKVQI 347
              G   +  +G ++        GK++P  G +VLG+ +    + +  A  F G ++++ +
Sbjct: 1515 TGGAWRVYIDGELSDSGTGLSVGKAIPGGGALVLGQEQDKKGEGFNPAESFVGSISQLNL 1574

Query: 348  WNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGY-DDINGGVE 390
            W+  L    +++     C  E  L  G VL W  +   I G V+
Sbjct: 1575 WDYVLS-PQQVKSLASSCPEE--LSRGNVLAWPDFVSGITGKVK 1615

May play a role in the cell attachment process.

Rattus norvegicus (taxid: 10116)

>sp|P49013|FBP3_STRPU Fibropellin-3 OS=Strongylocentrotus purpuratus GN=EGF3 PE=1 SV=1

 Score =  171 bits (433), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/174 (49%), Positives = 115/174 (66%), Gaps = 3/174 (1%)

Query: 63  TPNDSIPG-TCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQC 121
           TPN  + G TC D V  + C C  GFTG +C+  ID+CAS PC+NGG+CVD ++G+ C C
Sbjct: 181 TPNPCLNGATCVDQVNDYQCICAPGFTGDNCETDIDECASAPCRNGGACVDQVNGYTCNC 240

Query: 122 RPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNP 181
            PGF G+ CE +I+EC S PC   G   C+D  N+F C C  GYTG++CET+I++C S+P
Sbjct: 241 IPGFNGVNCENNINECASIPCLNGGI--CVDGINQFACTCLPGYTGILCETDINECASSP 298

Query: 182 CLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
           C NGG C D V ++TCDC  G+TGS CE +I  C + PC N  +C+D    + C
Sbjct: 299 CQNGGSCTDAVNRYTCDCRAGFTGSNCETNINECASSPCLNGGSCLDGVDGYVC 352

Forms the apical lamina, a component of the extracellular matrix.

Strongylocentrotus purpuratus (taxid: 7668)

>sp|P07207|NOTCH_DROME Neurogenic locus Notch protein OS=Drosophila melanogaster GN=N PE=1 SV=3

 Score =  167 bits (423), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/167 (49%), Positives = 106/167 (63%), Gaps = 3/167 (1%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
           G C +  G + C+C  GFTG  C+  I++C S PCQN GSC+D    F C C PGF G Q
Sbjct: 463 GICVNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQ 522

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
           CE DIDEC S+PC  +GT  C D  N F+C C +G+TG  C+ NIDDC+S PC N GIC 
Sbjct: 523 CEIDIDECQSNPCLNDGT--CHDKINGFKCSCALGFTGARCQINIDDCQSQPCRNRGICH 580

Query: 190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCV 236
           D +A ++C+CPPG+TG+ CE +I  C + PC     CID    F C+
Sbjct: 581 DSIAGYSCECPPGYTGTSCEININDCDSNPCHR-GKCIDDVNSFKCL 626

Signaling protein, which regulates, with both positive and negative signals, the differentiation of at least central and peripheral nervous system and eye, wing disk, oogenesis, segmental appendages such as antennae and legs, and muscles, through lateral inhibition or induction. Functions as a receptor for membrane-bound ligands Delta and Serrate to regulate cell-fate determination. Upon ligand activation, and releasing from the cell membrane, the Notch intracellular domain (NICD) forms a transcriptional activator complex with Su(H) (Suppressor of hairless) and activates genes of the E(spl) complex. Essential for proper differentiation of ectoderm. Fringe (fng) acts in the Golgi to determine the type of O-linked fucose on the EGF modules in N, altering the ability of N to bind with Delta (Dl). O-fut1 also has a role in modulating the interaction. Rumi acts in the endoplasmic reticulum to glucosylate the EGF modules in N, this is required for correct folding and cleavage of N.

Drosophila melanogaster (taxid: 7227)

>sp|O35516|NOTC2_MOUSE Neurogenic locus notch homolog protein 2 OS=Mus musculus GN=Notch2 PE=1 SV=1

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 2/175 (1%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C +  G + C C  GF+G  C+  I+DC + PCQNGGSCVD ++ F CQC PGF+G +
Sbjct: 884  GVCHNTQGSYVCECPPGFSGMDCEEDINDCLANPCQNGGSCVDHVNTFSCQCHPGFIGDK 943

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            C+ D++ECLS+PC   GT  C D  N + C C  G+ GV CE NID+C  + C NGG C 
Sbjct: 944  CQTDMNECLSEPCKNGGT--CSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCV 1001

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGR 244
            DG+  F+C CP G+TG  C  DI  C++ PC N   C+D    + C+      G+
Sbjct: 1002 DGINSFSCLCPVGFTGPFCLHDINECSSNPCLNAGTCVDGLGTYRCICPLGYTGK 1056

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.

Mus musculus (taxid: 10090)

>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 104/174 (59%), Gaps = 2/174 (1%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C +L GGF C C+ GFTG  C++ IDDC   PC NGG C D ++GF+C C  GF G +
Sbjct: 880  GVCENLRGGFQCRCNPGFTGALCENDIDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGER 939

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            C  DIDEC+S PC   G   C D  N + C C  G++G+ CE N  DC  + C NGG C 
Sbjct: 940  CAEDIDECVSAPCRNGG--NCTDCVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCV 997

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQG 243
            DG++ F+C C PG+TG+ C+ D+  C + PCQN  +C D +  + C   H   G
Sbjct: 998  DGISSFSCVCLPGFTGNYCQHDVNECDSRPCQNGGSCQDGYGTYKCTCPHGYTG 1051

Implicated in cell fate specifications during embryo development. May be involved in the formation of the neural plate, notochord and brain vesicles.

Danio rerio (taxid: 7955)

>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3

 Score =  162 bits (411), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 5/179 (2%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C +      C C LG+TG +C+  +D+CAS PCQ+G +C D + G+ C+C PG+ G+ 
Sbjct: 1124 GVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVN 1183

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNP-CLNGGIC 188
            CE ++DEC + PC   GT  C+DL N F+C C  G  G++CE NIDDC   P CLNGG C
Sbjct: 1184 CEYEVDECQNQPCQNGGT--CIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQC 1241

Query: 189  RDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDA--NCIDLFQDFFCVSSHSVQGRR 245
             D +  ++C C PG+ G RCE DI  C + PC ++   +CI L  D+ CV   +  GR 
Sbjct: 1242 MDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRH 1300

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). Involved in bone remodeling and homeostasis. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.

Homo sapiens (taxid: 9606)

>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus GN=Notch2 PE=1 SV=1

 Score =  160 bits (405), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/175 (45%), Positives = 104/175 (59%), Gaps = 2/175 (1%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C +  G + C C  GF+G  C+  I+DC + PCQNGGSCVD ++ F C C PGFVG +
Sbjct: 886  GICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCLCLPGFVGDK 945

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            C+ D++ECLS+PC   GT  C D  N + C C  G+ GV CE NID+C  + C NGG C 
Sbjct: 946  CQTDMNECLSEPCKNGGT--CSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCV 1003

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGR 244
            DG+  F+C CP G+TG  C  DI  C++ PC N   C+D    + C       G+
Sbjct: 1004 DGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDGLGTYRCTCPLGYTGK 1058

Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	418
328723934	3561	PREDICTED: hypothetical protein LOC10016	0.827	0.097	0.476	1e-99
350413330	3564	PREDICTED: hypothetical protein LOC10074	0.830	0.097	0.464	9e-95
270002799	3631	hypothetical protein TcasGA2_TC000871 [T	0.808	0.093	0.509	1e-94
189234400	3570	PREDICTED: similar to SP1070 CG9138-PA [	0.808	0.094	0.509	2e-94
307180183	3602	Fibropellin-1 [Camponotus floridanus]	0.830	0.096	0.466	2e-94
383856229	3582	PREDICTED: uncharacterized protein LOC10	0.799	0.093	0.523	2e-92
328782396	3510	PREDICTED: hypothetical protein LOC41282	0.806	0.096	0.516	6e-92
340717389	3564	PREDICTED: hypothetical protein LOC10064	0.799	0.093	0.521	3e-91
307209910	3536	Fibropellin-1 [Harpegnathos saltator]	0.834	0.098	0.459	3e-91
332016443	3485	Fibropellin-1 [Acromyrmex echinatior]	0.834	0.100	0.452	1e-90

>gi|328723934|ref|XP_001949468.2| PREDICTED: hypothetical protein LOC100162025 [Acyrthosiphon pisum]

 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/418 (47%), Positives = 240/418 (57%), Gaps = 72/418 (17%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D V  FSC C  G+TGK C+  +  C S+PC N  +C+++   + C C  G  G Q
Sbjct: 2381 GKCYDGVNTFSCQCPPGWTGKRCEIDLSSCQSKPCYNDATCINLFQDYFCVCPSGTDGKQ 2440

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE   + C+ +PC   G  +C D  +   C C   Y G+ C+   D C++N C NG  C 
Sbjct: 2441 CETAPERCIGNPCMHGG--RCQDFGSGLNCTCPSDYDGIGCQYEFDACQANTCKNGATCI 2498

Query: 190  DG--------------------------------------VAKFTCDCPPGWTGSRCEKD 211
            D                                         KF C CP   TG  C K 
Sbjct: 2499 DNGPGYKCICPPGFMGKNCDEDIVDCKENSCPPTATCIDLTNKFYCQCPFNLTGDDCRKT 2558

Query: 212  I--------------GSCTNMPCQ----NDANCIDL-------------FQDFFCVSSHS 240
            I               +   +P Q     D+  I +             F  +   S H 
Sbjct: 2559 IQVDYDFSFPEETLSSAALTVPFQFTGARDSFTIAMWVQYAQKDEPGIFFTLYSVTSPHV 2618

Query: 241  VQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGL 300
            VQG+R LIQAHSSGV+VS+FPELQD FLAFHEY TINDGQWHH+AIVW QGTLTLITEGL
Sbjct: 2619 VQGQRVLIQAHSSGVEVSIFPELQDVFLAFHEYTTINDGQWHHIAIVWNQGTLTLITEGL 2678

Query: 301  IAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQK 360
            IA K+E YG+G+ LP++GW VLGKPR D  K +TEAGF+G+L KVQ+W RALD TNE+QK
Sbjct: 2679 IASKMEGYGTGRKLPEFGWAVLGKPRMDR-KTFTEAGFKGQLNKVQVWGRALDVTNEVQK 2737

Query: 361  QVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            QVRDCRTEPVL+ GLVLTW G+DDI GGVER+VPS CSQH CP GYTGP C+QL VDK
Sbjct: 2738 QVRDCRTEPVLYQGLVLTWAGFDDIQGGVERIVPSKCSQHSCPVGYTGPNCEQLQVDK 2795

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350413330|ref|XP_003489961.1| PREDICTED: hypothetical protein LOC100747564 [Bombus impatiens]

 Score =  353 bits (906), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 195/420 (46%), Positives = 230/420 (54%), Gaps = 73/420 (17%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             TC D VGGF C C  G+TG HC+  +  C + PCQN  +CVD+   + C C  G  G Q
Sbjct: 2374 ATCRDEVGGFKCMCPEGWTGVHCEVDVGMCQNHPCQNDAACVDLFIDYFCVCPSGTDGKQ 2433

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE   + C+ +PC   G  +C D  +   C C   YTG+ C+   D C++  C NG  C 
Sbjct: 2434 CETAPERCIGNPCMHNG--RCQDFGSGLNCTCPDDYTGIGCQYEYDACQAGACKNGATCI 2491

Query: 190  DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC-------------- 235
            D  A FTC CP G+TG  CE DI  C    C   A CIDL   FFC              
Sbjct: 2492 DEGAGFTCICPSGYTGKTCEDDIIDCKENSCPPSATCIDLTGKFFCQCPFNLTGDDCRKS 2551

Query: 236  ------------VSSHSVQ-------GRRPL--------IQAHSSGVQVSLFP------- 261
                        V S + Q       GR+ L         Q   +G+  +L+        
Sbjct: 2552 IQVDYDLYFSDPVRSSAAQVIPFFTGGRKSLTVAMWVQYTQKDEAGIFFTLYSVSSPHVP 2611

Query: 262  --------------------ELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITE 298
                                +LQD +L F EYATINDGQWHHVA+VW     G L LITE
Sbjct: 2612 MNRRLMIQAHSNGVQVSLFHDLQDVYLPFREYATINDGQWHHVAVVWNGENGGELVLITE 2671

Query: 299  GLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEI 358
            GLIA K E YGSG+SLP Y W VLGKP+ +N K YTE+GF+G LTKVQIW+RAL  TNEI
Sbjct: 2672 GLIASKTEGYGSGRSLPSYAWAVLGKPQSENTKGYTESGFQGHLTKVQIWSRALHITNEI 2731

Query: 359  QKQVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            QKQVRDCRTEPVL+ GLVLTW GYDD  GGVERVVPSHC Q +CPPGY G +C QL  DK
Sbjct: 2732 QKQVRDCRTEPVLYQGLVLTWAGYDDTVGGVERVVPSHCGQRVCPPGYGGTKCQQLESDK 2791

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002799|gb|EEZ99246.1| hypothetical protein TcasGA2_TC000871 [Tribolium castaneum]

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/353 (50%), Positives = 224/353 (63%), Gaps = 15/353 (4%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D   G +CSC  GFTG  CQ+  D C +  C+NG +C +   GF C C PGF G  
Sbjct: 2510 GKCQDFGSGLNCSCSDGFTGIGCQYEYDACQANACKNGATCTNDPFGFKCVCAPGFTGKY 2569

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGIC- 188
            CE DI +C  + C P  T  C+DL ++F C+C    TG       +DC+    ++  +  
Sbjct: 2570 CEEDIIDCKENSCPPSAT--CIDLTDRFYCQCPFNLTG-------EDCRKTISVDYDLYF 2620

Query: 189  RDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLI 248
             D          P +TGS+    I        Q D N I  F  +   S H  + R+PLI
Sbjct: 2621 SDATRSSASQAVPFYTGSKSSLTIAMWIQF-TQKDENGI-FFTLYSVSSKHIPKDRKPLI 2678

Query: 249  QAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITEGLIAGKV 305
            QAHS+GVQVSLFP++QD +L++ +Y TIND QWHH+AIVW     G L LITEGLIA KV
Sbjct: 2679 QAHSNGVQVSLFPDIQDVYLSYRDYTTINDAQWHHIAIVWDGENGGELKLITEGLIASKV 2738

Query: 306  ENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDC 365
            E YGSG+ LP+Y WV LGKP+  N KAYTE+GF+G LTKVQIW RALD TNE+QKQVRDC
Sbjct: 2739 EGYGSGRKLPEYAWVTLGKPQSGNPKAYTESGFQGHLTKVQIWGRALDVTNEVQKQVRDC 2798

Query: 366  RTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            RTEPVL+ GL+LTW GY++  GGVER+VPSHC   +CPPGY G +C +L VDK
Sbjct: 2799 RTEPVLYRGLILTWAGYEETVGGVERIVPSHCGHRVCPPGYIGAKCQELQVDK 2851

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234400|ref|XP_974965.2| PREDICTED: similar to SP1070 CG9138-PA [Tribolium castaneum]

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 180/353 (50%), Positives = 224/353 (63%), Gaps = 15/353 (4%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D   G +CSC  GFTG  CQ+  D C +  C+NG +C +   GF C C PGF G  
Sbjct: 2472 GKCQDFGSGLNCSCSDGFTGIGCQYEYDACQANACKNGATCTNDPFGFKCVCAPGFTGKY 2531

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGIC- 188
            CE DI +C  + C P  T  C+DL ++F C+C    TG       +DC+    ++  +  
Sbjct: 2532 CEEDIIDCKENSCPPSAT--CIDLTDRFYCQCPFNLTG-------EDCRKTISVDYDLYF 2582

Query: 189  RDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLI 248
             D          P +TGS+    I        Q D N I  F  +   S H  + R+PLI
Sbjct: 2583 SDATRSSASQAVPFYTGSKSSLTIAMWIQFT-QKDENGI-FFTLYSVSSKHIPKDRKPLI 2640

Query: 249  QAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITEGLIAGKV 305
            QAHS+GVQVSLFP++QD +L++ +Y TIND QWHH+AIVW     G L LITEGLIA KV
Sbjct: 2641 QAHSNGVQVSLFPDIQDVYLSYRDYTTINDAQWHHIAIVWDGENGGELKLITEGLIASKV 2700

Query: 306  ENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDC 365
            E YGSG+ LP+Y WV LGKP+  N KAYTE+GF+G LTKVQIW RALD TNE+QKQVRDC
Sbjct: 2701 EGYGSGRKLPEYAWVTLGKPQSGNPKAYTESGFQGHLTKVQIWGRALDVTNEVQKQVRDC 2760

Query: 366  RTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            RTEPVL+ GL+LTW GY++  GGVER+VPSHC   +CPPGY G +C +L VDK
Sbjct: 2761 RTEPVLYRGLILTWAGYEETVGGVERIVPSHCGHRVCPPGYIGAKCQELQVDK 2813

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180183|gb|EFN68216.1| Fibropellin-1 [Camponotus floridanus]

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 194/416 (46%), Positives = 232/416 (55%), Gaps = 69/416 (16%)

Query: 72   CTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
            C D VGGF C C  G+TG +CQ  +  C + PCQN  +CVD+   + C C  G  G QCE
Sbjct: 2414 CVDEVGGFKCVCPEGWTGTYCQIDVGMCQNRPCQNDAACVDLFMDYFCVCPSGTDGKQCE 2473

Query: 132  ADIDECLSDPCSPEGT------------------------------------DKCLDLDN 155
               + C+ +PC   G                                       C+D  +
Sbjct: 2474 TAPERCIGNPCMHHGRCQDFGSGLNCTCPDDYTGIGCQYEYDACQAGACKNGATCIDEGS 2533

Query: 156  KFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSC 215
             F C C  GYTG  CE +I DCK N C     C D   KF C CP   TG  C K I   
Sbjct: 2534 GFTCVCPPGYTGHTCEEDIIDCKENSCPPSATCIDLTGKFFCQCPFNLTGDDCRKSIQVD 2593

Query: 216  TNM----PCQNDANCI-------------------------DLFQDFFCVSS-HSVQGRR 245
             ++    P ++ A+ I                          +F   + VSS H    R+
Sbjct: 2594 YDLYFSDPGRSSASQIIPFFTGSTKSLTVAMWVQFTQRDEAGIFFTLYSVSSPHVPTNRK 2653

Query: 246  PLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQ---GTLTLITEGLIA 302
             ++QAHS+GVQ+SLF +LQD +L F EYATINDGQWHHVA+VW     G LTLITEGLIA
Sbjct: 2654 LMMQAHSNGVQISLFHDLQDVYLPFREYATINDGQWHHVAVVWNGENGGELTLITEGLIA 2713

Query: 303  GKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQV 362
             K E YGSG+SLP Y W VLGKP+ +NIK YTE+GF+G LTKVQ+W RAL  TNEIQKQV
Sbjct: 2714 SKTEGYGSGRSLPAYAWAVLGKPQSENIKGYTESGFQGHLTKVQVWGRALHVTNEIQKQV 2773

Query: 363  RDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            RDCRTEPVL+ GLVLTW GYD+  GGVER+VPSHC Q +CPPGY G  C QL  DK
Sbjct: 2774 RDCRTEPVLYQGLVLTWAGYDETVGGVERIVPSHCGQRVCPPGYGGNRCQQLEADK 2829

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856229|ref|XP_003703612.1| PREDICTED: uncharacterized protein LOC100879487 [Megachile rotundata]

 Score =  345 bits (886), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 187/357 (52%), Positives = 226/357 (63%), Gaps = 23/357 (6%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D   G +C+C   +TG  CQ+  D C +  C+NG +C+D   GF C C PG+ G  
Sbjct: 2468 GRCQDFGSGLNCTCPDDYTGIGCQYEYDACQAGACKNGATCIDDGPGFTCICPPGYTGKT 2527

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNI----DDCKSNPCLNG 185
            CE DI +C  + C P  T  C+DL  KF C+C    TG  C  +I    D   S+P    
Sbjct: 2528 CEDDIVDCKENSCPPSAT--CIDLTGKFFCQCPFNLTGDDCRKSIQVDYDLYFSDP---- 2581

Query: 186  GICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSS-HSVQGR 244
               R   A+      P +TG+R    +        +++A    +F   + VSS H    R
Sbjct: 2582 --ARSSAAQVI----PFFTGTRKSLTVAMWVQYTQKDEAG---IFFTLYAVSSPHVPSNR 2632

Query: 245  RPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITEGLI 301
            R +IQAHSSGVQVSLF +LQD +L F EYATINDGQWHHVA+VW     G L LITEGLI
Sbjct: 2633 RLMIQAHSSGVQVSLFHDLQDVYLPFREYATINDGQWHHVAVVWNGENGGELILITEGLI 2692

Query: 302  AGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQ 361
            A K E YGSG+SLP Y W VLGKP+ +N K Y+E+GF+G LTKVQIW+RAL  TNEIQKQ
Sbjct: 2693 ASKTEGYGSGRSLPAYAWAVLGKPQTENAKGYSESGFQGHLTKVQIWSRALHVTNEIQKQ 2752

Query: 362  VRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            VRDCRTEPVL+ GLVLTWTGYD+  GGVERVVPSHC Q +CPPGY G +C QL  DK
Sbjct: 2753 VRDCRTEPVLYQGLVLTWTGYDETVGGVERVVPSHCGQRVCPPGYGGSKCQQLESDK 2809

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782396|ref|XP_396277.4| PREDICTED: hypothetical protein LOC412825 [Apis mellifera]

 Score =  344 bits (882), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 183/354 (51%), Positives = 225/354 (63%), Gaps = 17/354 (4%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D   G +C+C   +TG  CQ+  D C +  C+NG +C+D   GF C C  G+ G  
Sbjct: 2396 GRCQDFGSGLNCTCPDDYTGIGCQYEYDACQAGACKNGATCIDEGPGFTCICPSGYTGKT 2455

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
            CE DI +C  + C P  T  C+DL  KF C+C    TG       DDC+ +  ++  +  
Sbjct: 2456 CEEDIIDCKENSCPPSAT--CIDLTGKFFCQCPFNLTG-------DDCRKSIQVDYDLYF 2506

Query: 190  DGVAKFTCD-CPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSS-HSVQGRRPL 247
               A+ +     P +TG+R    +        +++A    +F   + VSS H    RR +
Sbjct: 2507 SDPARSSASQVIPFFTGARKSLTVAMWVQYTQKDEAG---IFFTLYGVSSPHVPMNRRLM 2563

Query: 248  IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITEGLIAGK 304
            IQAHS+GVQVSLF +LQD +L F EYATINDGQWHHVA+VW     G L LITEGLIA K
Sbjct: 2564 IQAHSNGVQVSLFHDLQDVYLPFREYATINDGQWHHVAVVWNGENSGELVLITEGLIASK 2623

Query: 305  VENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRD 364
             E YGSG+SLP Y W VLGKP+ +N K YTE+GF+G LTKVQIW+RAL  TNEIQKQVRD
Sbjct: 2624 TEGYGSGRSLPAYAWAVLGKPQSENTKGYTESGFQGHLTKVQIWSRALHVTNEIQKQVRD 2683

Query: 365  CRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            CRTEPVL+ GLVLTW GYDD  GGVERVVPSHC Q +CPPGY G +C QL  DK
Sbjct: 2684 CRTEPVLYQGLVLTWAGYDDTFGGVERVVPSHCGQRVCPPGYGGSKCQQLESDK 2737

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717389|ref|XP_003397166.1| PREDICTED: hypothetical protein LOC100648516 [Bombus terrestris]

 Score =  342 bits (876), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/357 (52%), Positives = 223/357 (62%), Gaps = 23/357 (6%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
            G C D   G +C+C   +TG  CQ+  D C +  C+NG +C+D   GF C C  G+ G  
Sbjct: 2450 GRCQDFGSGLNCTCPDDYTGIGCQYEYDACQAGACKNGATCIDEGPGFTCICPSGYTGKT 2509

Query: 130  CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNI----DDCKSNPCLNG 185
            CE DI +C  + C P  T  C+DL  KF C+C    TG  C  +I    D   S+P    
Sbjct: 2510 CEDDIIDCKENSCPPSAT--CIDLTGKFFCQCPFNLTGDDCRKSIQVDYDLYFSDP---- 2563

Query: 186  GICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSS-HSVQGR 244
               R   A+      P +TG R    +        +++A    +F   + VSS H    R
Sbjct: 2564 --ARSSAAQVI----PFFTGGRKSLTVAMWVQYTQKDEAG---IFFTLYSVSSPHVPINR 2614

Query: 245  RPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVW---TQGTLTLITEGLI 301
            R +IQAHS+GVQVSLF +LQD +L F EYATINDGQWHHVA+VW     G L LITEGLI
Sbjct: 2615 RLMIQAHSNGVQVSLFHDLQDVYLPFREYATINDGQWHHVAVVWNGENGGELVLITEGLI 2674

Query: 302  AGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQ 361
            A K E YGSG+SLP Y W VLGKP+ +N K YTE+GF+G LTKVQIW+RAL  TNEIQKQ
Sbjct: 2675 ASKTEGYGSGRSLPAYAWAVLGKPQSENTKGYTESGFQGHLTKVQIWSRALHITNEIQKQ 2734

Query: 362  VRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            VRDCRTEPVL+ GLVLTW GYDD  GGVERVVPSHC Q +CPPGY G +C QL  DK
Sbjct: 2735 VRDCRTEPVLYQGLVLTWAGYDDTVGGVERVVPSHCGQRVCPPGYGGTKCQQLESDK 2791

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209910|gb|EFN86689.1| Fibropellin-1 [Harpegnathos saltator]

 Score =  342 bits (876), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 192/418 (45%), Positives = 230/418 (55%), Gaps = 69/418 (16%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             TC D V GF C+C  G+TG +CQ  I  C ++PCQN  +CVD+   + C C  G  G Q
Sbjct: 2346 ATCRDEVAGFKCTCASGWTGVYCQTDIGTCQNQPCQNDAACVDLFLDYFCVCPSGTDGKQ 2405

Query: 130  CEADIDECLSDPCSPEGT------------------------------------DKCLDL 153
            CE   + C+ +PC   G                                       C+D 
Sbjct: 2406 CETAPERCIGNPCMHHGRCQDFGSGLNCTCPEDYMGIGCQYEYDACQAGACKNGATCVDE 2465

Query: 154  DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG 213
               F C C  GYTG  CE +I DCK N C     C D   KF C CP   TG  C K I 
Sbjct: 2466 GPGFTCVCPPGYTGRTCEEDIIDCKENSCPPSATCIDLTGKFFCQCPFNLTGDDCRKTIQ 2525

Query: 214  SCTNM----PCQNDAN-CIDLFQD---------------------FFCV----SSHSVQG 243
               ++    P ++ A+  I  F                       FF +    S H    
Sbjct: 2526 VDYDLYFSDPGRSSASQAIPFFTSSTKSLTVAMWVQFTLRDDSGIFFTLYGVSSPHVPTN 2585

Query: 244  RRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQ---GTLTLITEGL 300
            RR +IQAHS+GVQ+SLF +LQD  L+F EYAT+NDGQWHHVAIVW     G LTLITEGL
Sbjct: 2586 RRLMIQAHSNGVQISLFRDLQDVHLSFGEYATVNDGQWHHVAIVWNGENGGELTLITEGL 2645

Query: 301  IAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQK 360
            IA +++ YGSG+SLP Y W VLG P+ DN K YTE+GF+G LTKVQ+W RAL  TNEIQK
Sbjct: 2646 IAQRIKGYGSGRSLPAYAWAVLGNPQSDNTKGYTESGFQGHLTKVQVWGRALHVTNEIQK 2705

Query: 361  QVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            QVRDCRTEPVL+ GL+LTW GYD+  GGVERVVPSHC   +CP GY G +C QL  DK
Sbjct: 2706 QVRDCRTEPVLYQGLILTWAGYDETVGGVERVVPSHCGHRVCPLGYGGNKCQQLEADK 2763

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016443|gb|EGI57356.1| Fibropellin-1 [Acromyrmex echinatior]

 Score =  339 bits (870), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/418 (45%), Positives = 225/418 (53%), Gaps = 69/418 (16%)

Query: 70   GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             TC D +GGF C C  G+ G +CQ  +  C + PCQN  +CVD+   + C C  G  G Q
Sbjct: 2307 ATCRDEIGGFKCICPEGWNGVYCQMDVGMCQNRPCQNDATCVDLFLDYFCVCPSGTDGKQ 2366

Query: 130  CEADIDECLSDPCSPEGT------------------------------------DKCLDL 153
            CE   + C+ +PC   G                                       C+D 
Sbjct: 2367 CETAPERCIGNPCMHHGRCQDFGSGLNCTCSNDYTGIGCQYEYDACQAGACKNGATCIDE 2426

Query: 154  DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI- 212
               + C C  GYTG  CE +I DCK N C     C D   KF C CP   TG  C K I 
Sbjct: 2427 GPGYTCICPPGYTGQTCEEDIIDCKENSCPPSATCIDLTGKFFCQCPFNLTGDDCRKSIQ 2486

Query: 213  -------------GSCTNMPC-QNDANCI---------------DLFQDFFCVSSHSVQG 243
                          +   +P   N A  +               + F  +   S+H    
Sbjct: 2487 VDYDLYFSDQGRSSASQVIPFFTNSAKSLTVAMWVQFTQRDEGGNFFTLYSVSSAHVPTN 2546

Query: 244  RRPLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQ---GTLTLITEGL 300
            RR +IQA S+GV VSLF +LQD +L F EYATINDGQWHH+A+VW     G L LITEGL
Sbjct: 2547 RRLMIQAQSNGVHVSLFHDLQDVYLPFREYATINDGQWHHIAVVWNGENGGELILITEGL 2606

Query: 301  IAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQK 360
            IA K E YGSG+SLP Y W VLGKP+ +N K+YTE GF+G LTKVQ+W RAL  TNEIQK
Sbjct: 2607 IASKTEGYGSGRSLPAYAWTVLGKPQSENTKSYTELGFQGHLTKVQVWGRALHVTNEIQK 2666

Query: 361  QVRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
            QVRDCRTEPVL+ GLVLTW GYD+  GGVERVVPSHC Q +CP GY G +C QL VDK
Sbjct: 2667 QVRDCRTEPVLYQGLVLTWAGYDETAGGVERVVPSHCGQRVCPLGYGGNKCQQLEVDK 2724

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	418
FB|FBgn0031879	3589	uif "uninflatable" [Drosophila	0.806	0.093	0.484	3.1e-95
WB|WBGene00018546	3170	F47C12.1 [Caenorhabditis elega	0.413	0.054	0.439	7.3e-63
RGD|1588987	3564	Svep1 "sushi, von Willebrand f	0.416	0.048	0.437	5e-55
UNIPROTKB|P0C6B8	3564	Svep1 "Sushi, von Willebrand f	0.416	0.048	0.437	5e-55
MGI|MGI:1928849	3567	Svep1 "sushi, von Willebrand f	0.392	0.045	0.475	2.7e-54
UNIPROTKB|F1SND0	3573	SVEP1 "Uncharacterized protein	0.435	0.050	0.423	9.3e-54
UNIPROTKB|F1MNH3	3573	SVEP1 "Uncharacterized protein	0.416	0.048	0.414	6.3e-53
UNIPROTKB|F1Q0A7	3253	SVEP1 "Uncharacterized protein	0.392	0.050	0.457	8.4e-53
UNIPROTKB|J9NWK3	3569	SVEP1 "Uncharacterized protein	0.392	0.045	0.457	1.1e-52
UNIPROTKB|J9P1K9	3640	SVEP1 "Uncharacterized protein	0.392	0.045	0.457	1.1e-52

FB|FBgn0031879 uif "uninflatable" [Drosophila melanogaster (taxid:7227)]

 Score = 831 (297.6 bits), Expect = 3.1e-95, Sum P(2) = 3.1e-95
 Identities = 172/355 (48%), Positives = 212/355 (59%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             G C D   G +CSC   ++G  CQ+  D C    CQNG +CVD   G+ CQC PGF G  
Sbjct:  2459 GKCQDFGSGLNCSCPADYSGIGCQYEYDACEEHVCQNGATCVDNGAGYSCQCPPGFTGRN 2518

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE DI +C  + C P  T  C+DL N F C+C    TG       DDC+    ++  +  
Sbjct:  2519 CEQDIVDCKDNSCPPGAT--CVDLTNGFYCQCPFNMTG-------DDCRKAIQVDYDLYF 2569

Query:   190 DGVAKFTC-DCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLI 248
                ++ T     P  TG      +        Q D   I  F  +   S+   Q RR L+
Sbjct:  2570 SDPSRSTAAQVVPFPTGEANSLTVAMWVQF-AQKDDRGI-FFTLYGVQSARMTQQRRMLL 2627

Query:   249 QAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVE 306
             QAHSSGVQVSLF +  DAFL+F EY ++NDGQWHHVA+VW    G L LITEGLIA K+E
Sbjct:  2628 QAHSSGVQVSLFEDQPDAFLSFGEYTSVNDGQWHHVAVVWDGISGQLQLITEGLIASKME 2687

Query:   307 NYGSGKSLPQYGWVVLGKPRP---DNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVR 363
              YG+G SLP Y W VLG P+P    N  AY+++GF+G +TK Q+W RALD T+EIQKQVR
Sbjct:  2688 -YGAGGSLPGYLWAVLGLPQPYGLSNELAYSDSGFQGTITKAQVWARALDITSEIQKQVR 2746

Query:   364 DCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK 418
             DCR+EPVL+ GL+L W GY+  +GGVER VPS C Q  CP GYTG  C QL VDK
Sbjct:  2747 DCRSEPVLYPGLILNWAGYEVTSGGVERNVPSLCGQRKCPVGYTGANCQQLVVDK 2801

GO:0005112 "Notch binding" evidence=ISS

GO:0007155 "cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0035152 "regulation of tube architecture, open tracheal system" evidence=IMP

GO:0046716 "muscle cell homeostasis" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IGI

WB|WBGene00018546 F47C12.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 474 (171.9 bits), Expect = 7.3e-63, Sum P(3) = 7.3e-63
 Identities = 76/173 (43%), Positives = 99/173 (57%)

Query:    72 CTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
             C D + G+ C C  G+ G HCQHL+D CA +PC N  +C +M   + C C  GF G+ CE
Sbjct:  1915 CIDEINGYMCECADGYEGVHCQHLVDHCAKQPCHNNATCTNMGATYHCDCTLGFDGVHCE 1974

Query:   132 ADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDG 191
              +IDEC  + C   GT+ C D  N F+C C  GYTG  C+   D C  +PCLN   C D 
Sbjct:  1975 MNIDECAENQCDKLGTESCRDAVNDFKCVCKPGYTGPRCDVKQDQCADSPCLNDAQCVDM 2034

Query:   192 VAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGR 244
                + C C  GWTG +CE+D GSC   PC+N+  C+ L  D+FCV    V G+
Sbjct:  2035 GGAYKCVCKSGWTGPKCEQDNGSCAAKPCRNNGFCVSLVADYFCVCPPGVSGK 2087

GO:0007155 "cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1588987 Svep1 "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 476 (172.6 bits), Expect = 5.0e-55, Sum P(2) = 5.0e-55
 Identities = 77/176 (43%), Positives = 101/176 (57%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             G C D VGGF+C C  G+TG+ C+  I++C+S PC N G+C D L  + C C  G+VG+ 
Sbjct:  1239 GICRDKVGGFTCECSSGYTGQICEENINECSSSPCLNKGTCTDGLASYRCTCVSGYVGVH 1298

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE D++EC S PC       C D    F C+C  G+ G  CE N+D+C S PC NG  C+
Sbjct:  1299 CETDVNECQSSPCLNNAV--CKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGATCK 1356

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRR 245
             DG   F C CP G+TG  CE +I  C + PC+N A C+D    + C       GRR
Sbjct:  1357 DGANSFRCQCPAGFTGPHCELNINECQSNPCRNQATCVDELNSYSCKCRPGFSGRR 1412

GO:0003682 "chromatin binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|P0C6B8 Svep1 "Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 476 (172.6 bits), Expect = 5.0e-55, Sum P(2) = 5.0e-55
 Identities = 77/176 (43%), Positives = 101/176 (57%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             G C D VGGF+C C  G+TG+ C+  I++C+S PC N G+C D L  + C C  G+VG+ 
Sbjct:  1239 GICRDKVGGFTCECSSGYTGQICEENINECSSSPCLNKGTCTDGLASYRCTCVSGYVGVH 1298

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE D++EC S PC       C D    F C+C  G+ G  CE N+D+C S PC NG  C+
Sbjct:  1299 CETDVNECQSSPCLNNAV--CKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGATCK 1356

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRR 245
             DG   F C CP G+TG  CE +I  C + PC+N A C+D    + C       GRR
Sbjct:  1357 DGANSFRCQCPAGFTGPHCELNINECQSNPCRNQATCVDELNSYSCKCRPGFSGRR 1412

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:1928849 Svep1 "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" [Mus musculus (taxid:10090)]

 Score = 473 (171.6 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
 Identities = 79/166 (47%), Positives = 107/166 (64%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             GTC  L  G+ C C  G+TG  C+  ID+C+S PC NGG C D + GF C+C  G+ G  
Sbjct:  1205 GTCQQLGRGYVCLCPPGYTGLKCETDIDECSSLPCLNGGICRDQVGGFTCECSLGYSGQI 1264

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +I+EC+S PC  +GT  C D    ++C C  GY GV CET++++C+S+PCLN  +C+
Sbjct:  1265 CEENINECISSPCLNKGT--CTDGLASYRCTCVKGYMGVHCETDVNECQSSPCLNNAVCK 1322

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
             D V  F+C CPPG+ G+RCEK++  C + PCQN A C D    F C
Sbjct:  1323 DQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGATCKDGANSFRC 1368

GO:0003682 "chromatin binding" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1SND0 SVEP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 463 (168.0 bits), Expect = 9.3e-54, Sum P(2) = 9.3e-54
 Identities = 78/184 (42%), Positives = 105/184 (57%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             G C D VGGF C C  G+TG+ C+  I++C+S PC N G+CVD L G+ C C  G++GL 
Sbjct:  1246 GICKDQVGGFICECPSGYTGQLCEENINECSSSPCLNKGTCVDGLAGYRCTCVKGYMGLH 1305

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +++EC S+PC       C D    F C+C  G+ G  CE N+D+C S PC NG  C+
Sbjct:  1306 CETEVNECQSNPCLNNAA--CEDQLGGFMCKCPPGFLGTRCEINVDECLSQPCKNGATCK 1363

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQ 249
             DG   F C C  G+TG RC+ +I  C + PC+N A C+D    + C       G R   +
Sbjct:  1364 DGANSFRCLCAAGFTGPRCDLNINECQSNPCRNQATCVDELNSYSCKCQPGFSGSRCETE 1423

Query:   250 AHSS 253
               SS
Sbjct:  1424 QSSS 1427

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1MNH3 SVEP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 440 (159.9 bits), Expect = 6.3e-53, Sum P(3) = 6.3e-53
 Identities = 73/176 (41%), Positives = 99/176 (56%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             G C D VG F C C  G+TG+ C+  +++C S PC N G+CVD L G+ C C  G++GL 
Sbjct:  1246 GICKDRVGEFICECPSGYTGQLCEDNVNECISSPCLNKGTCVDGLAGYHCTCVKGYMGLH 1305

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +++EC S PC       C D    F C+C  G+ G  C+ N+D+C S PC NG  C+
Sbjct:  1306 CETEVNECQSSPCLNNAV--CEDQLGGFLCKCPPGFLGTRCDINMDECLSQPCKNGATCK 1363

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRR 245
             DG   F C C  G+TG+ CE +I  C + PC+N A C+D    + C       G R
Sbjct:  1364 DGANGFRCQCAAGFTGTHCELNIDECQSNPCKNQATCVDELNAYSCKCQPGFSGSR 1419

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1Q0A7 SVEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 452 (164.2 bits), Expect = 8.4e-53, Sum P(2) = 8.4e-53
 Identities = 76/166 (45%), Positives = 103/166 (62%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             GTC  L  G+ C C  G+TG  C+  ID+C+S PC N G C D++  F+C+C  G+ G  
Sbjct:   886 GTCQQLGRGYVCLCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQL 945

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +I+EC S PC  +GT  C D    + C C  GYTG+ CET +++C+S+PCLN  +C 
Sbjct:   946 CEENINECNSSPCLNKGT--CTDGLAGYHCTCVKGYTGLHCETEVNECQSSPCLNNAVCE 1003

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
             D V  F C CPPG+ G+RCEK++  C + PC+N A C D    F C
Sbjct:  1004 DQVGGFLCKCPPGFLGTRCEKNLDECLSQPCKNGATCKDGANSFRC 1049

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|J9NWK3 SVEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 452 (164.2 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 76/166 (45%), Positives = 103/166 (62%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             GTC  L  G+ C C  G+TG  C+  ID+C+S PC N G C D++  F+C+C  G+ G  
Sbjct:  1205 GTCQQLGRGYVCLCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQL 1264

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +I+EC S PC  +GT  C D    + C C  GYTG+ CET +++C+S+PCLN  +C 
Sbjct:  1265 CEENINECNSSPCLNKGT--CTDGLAGYHCTCVKGYTGLHCETEVNECQSSPCLNNAVCE 1322

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
             D V  F C CPPG+ G+RCEK++  C + PC+N A C D    F C
Sbjct:  1323 DQVGGFLCKCPPGFLGTRCEKNLDECLSQPCKNGATCKDGANSFRC 1368

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|J9P1K9 SVEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 452 (164.2 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 76/166 (45%), Positives = 103/166 (62%)

Query:    70 GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             GTC  L  G+ C C  G+TG  C+  ID+C+S PC N G C D++  F+C+C  G+ G  
Sbjct:  1276 GTCQQLGRGYVCLCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQL 1335

Query:   130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             CE +I+EC S PC  +GT  C D    + C C  GYTG+ CET +++C+S+PCLN  +C 
Sbjct:  1336 CEENINECNSSPCLNKGT--CTDGLAGYHCTCVKGYTGLHCETEVNECQSSPCLNNAVCE 1393

Query:   190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
             D V  F C CPPG+ G+RCEK++  C + PC+N A C D    F C
Sbjct:  1394 DQVGGFLCKCPPGFLGTRCEKNLDECLSQPCKNGATCKDGANSFRC 1439

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	418
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	3e-09
pfam13385	156	pfam13385, Laminin_G_3, Concanavalin A-like lectin	1e-08
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	2e-08
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	2e-07
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	9e-07
pfam02210	124	pfam02210, Laminin_G_2, Laminin G domain	1e-06
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	3e-06
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	9e-06
pfam00008	32	pfam00008, EGF, EGF-like domain	4e-05
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	5e-05
cd00110	151	cd00110, LamG, Laminin G domain; Laminin G-like do	6e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	9e-05
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	3e-04
PRK14581	672	PRK14581, hmsF, outer membrane N-deacetylase; Prov	3e-04
cd00152	201	cd00152, PTX, Pentraxins are plasma proteins chara	5e-04
smart00282	132	smart00282, LamG, Laminin G domain	7e-04
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	0.003
smart00159	206	smart00159, PTX, Pentraxin / C-reactive protein /	0.003
pfam00008	32	pfam00008, EGF, EGF-like domain	0.004

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 173 NIDDCKS-NPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           +ID+C S NPC NGG C + V  + C CPPG+TG  CE
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|222092 pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
           A +  GQWHHVA+ +  GTL L   G++ G     G+  +    G + +G          
Sbjct: 79  APLPPGQWHHVAVTYDGGTLKLYVNGVLVGSTTLSGTI-TSGTTGPLYIGA------SNG 131

Query: 334 TEAGFEGKLTKVQIWNRALDFTNEIQ 359
            +  F G + +V+I+NRAL    EI 
Sbjct: 132 GDRYFNGAIDEVRIYNRALS-AAEIA 156

This domain belongs to the Concanavalin A-like lectin/glucanases superfamily. Length = 156

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 96  IDDCASE-PCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
           ID+CAS  PCQNGG+CV+ +  + C C PG+ G  CE
Sbjct: 2   IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNCE 38

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)

Query: 173 NIDDCKS-NPCLNGGICRDGVAKFTCDCPPGWT-GSRCE 209
           +ID+C S NPC NGG C + V  + C+CPPG+T G  CE
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE 39

Length = 39

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 44.9 bits (107), Expect = 9e-07
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 2/38 (5%)

Query: 96  IDDCASE-PCQNGGSCVDMLDGFMCQCRPGFV-GLQCE 131
           ID+CAS  PCQNGG+CV+ +  + C+C PG+  G  CE
Sbjct: 2   IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRNCE 39

Length = 39

>gnl|CDD|216930 pfam02210, Laminin_G_2, Laminin G domain

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 14/115 (12%)

Query: 247 LIQAHSSGVQVSLFPELQDAFLAFH------------EYATINDGQWHHVAIVWTQGTLT 294
           L+ A        L  EL+D  L                   +NDGQWH V++     +LT
Sbjct: 10  LLYAGGEDGLDFLALELEDGRLVLRYDLGSGGSVLLLSGKKLNDGQWHRVSVSRDGRSLT 69

Query: 295 LITEGLIAGKVENYGSGKSLPQYGWVVLGK--PRPDNIKAYTEAGFEGKLTKVQI 347
           L  +G         GS   L   G + LG               GF G +  V++
Sbjct: 70  LSVDGGTVVSEALPGSSSILNLNGPLYLGGLPEDSGLSLLPVTEGFVGCIRNVRV 124

This family includes the Thrombospondin N-terminal-like domain, a Laminin G subfamily. Length = 124

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 133 DIDECLS-DPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE 171
           DIDEC S +PC   GT  C++    ++C C  GYTG  CE
Sbjct: 1   DIDECASGNPCQNGGT--CVNTVGSYRCSCPPGYTGRNCE 38

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 42.1 bits (99), Expect = 9e-06
 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 179 SNPCLNGGICRDGVAKFTCDCPPGWTGS-RCE 209
           SNPC NGG C +    + C CPPG+TG   CE
Sbjct: 5   SNPCSNGGTCVNTPGSYRCVCPPGYTGDRSCE 36

Length = 36

>gnl|CDD|215652 pfam00008, EGF, EGF-like domain

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 180 NPCLNGGICRDGVAKFTCDCPPGWTGSR 207
           NPC NGG C D    +TC+CP G+TG R
Sbjct: 5   NPCSNGGTCVDTPGGYTCECPEGYTGKR 32

There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. Length = 32

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 39.9 bits (94), Expect = 5e-05
 Identities = 12/24 (50%), Positives = 18/24 (75%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          GTC + VG + CSC  G+TG++C+
Sbjct: 15 GTCVNTVGSYRCSCPPGYTGRNCE 38

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|238058 cd00110, LamG, Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT 334
            +NDGQWH V++     ++TL  +G    +  + G    L   G + LG   P+++K+  
Sbjct: 76  PLNDGQWHSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLDGPLYLGG-LPEDLKSPG 134

Query: 335 EA---GFEGKLTKVQIW 348
                GF G +  +++ 
Sbjct: 135 LPVSPGFVGCIRDLKVN 151

Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules. Length = 151

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 39.2 bits (92), Expect = 9e-05
 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 133 DIDECLS-DPCSPEGTDKCLDLDNKFQCECNVGYT-GVMCE 171
           DIDEC S +PC   GT  C++    ++CEC  GYT G  CE
Sbjct: 1   DIDECASGNPCQNGGT--CVNTVGSYRCECPPGYTDGRNCE 39

Length = 39

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 100 ASEPCQNGGSCVDMLDGFMCQCRPGFVG 127
           AS PC NGG+CV+    + C C PG+ G
Sbjct: 4   ASNPCSNGGTCVNTPGSYRCVCPPGYTG 31

Length = 36

>gnl|CDD|184753 PRK14581, hmsF, outer membrane N-deacetylase; Provisional

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 12/52 (23%)

Query: 327 PDNIKAYTEAGFEGKLTKV-------QIWNR-----ALDFTNEIQKQVRDCR 366
           PD I+AY +AGF G +T +       Q W R      +DFTNE+ ++VRD R
Sbjct: 478 PDAIRAYEKAGFPGSITTIRQDPEMMQRWTRYKSKYLIDFTNELTREVRDIR 529

Length = 672

>gnl|CDD|238086 cd00152, PTX, Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 24/124 (19%)

Query: 277 NDGQWHHVAIVWT--QGTLTLITEG-LIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
           +DG WHH+ + W    G   L   G L   K      G ++   G ++LG+   D+   Y
Sbjct: 88  SDGAWHHICVTWESTSGIAELWVNGKLSVRKS--LKKGYTVGPGGSIILGQ-EQDS---Y 141

Query: 334 ------TEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTG--YDDI 385
                 T++ F G+++ V +W+  L  + E   ++++  +E    +G +L W    Y +I
Sbjct: 142 GGGFDATQS-FVGEISDVNMWDSVL--SPE---EIKNVYSEGGTLSGNILNWRALNY-EI 194

Query: 386 NGGV 389
           NGGV
Sbjct: 195 NGGV 198

CRP binds to ligands containing phosphocholine, SAP binds to amyloid fibrils, DNA, chromatin, fibronectin, C4-binding proteins and glycosaminoglycans. "Long" pentraxins have N-terminal extensions to the common pentraxin domain; one group, the neuronal pentraxins, may be involved in synapse formation and remodeling, and they may also be able to form heteromultimers. Length = 201

>gnl|CDD|214598 smart00282, LamG, Laminin G domain

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT 334
            +NDGQWH VA+     ++TL  +G      E+ G    L   G + LG   P+++K   
Sbjct: 55  PLNDGQWHRVAVERNGRSVTLSVDGGNRVSGESPGGLTILNLDGPLYLGG-LPEDLKLPP 113

Query: 335 EA---GFEGKLTKVQIWNR 350
                GF G +  +++  +
Sbjct: 114 LPVTPGFRGCIRNLKVNGK 132

Length = 132

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 70 GTCTDLVGGFSCSCDLGFT-GKHCQ 93
          GTC + VG + C C  G+T G++C+
Sbjct: 15 GTCVNTVGSYRCECPPGYTDGRNCE 39

Length = 39

>gnl|CDD|128463 smart00159, PTX, Pentraxin / C-reactive protein / pentaxin family

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 16/121 (13%)

Query: 276 INDGQWHHVAIVWTQGTLTLITEGLIAGKV---ENYGSGKSLPQYGWVVLGKPRPDNIKA 332
            +DG+WHH+   W   + + I E  + GK    +    G ++   G ++LG+ + D+   
Sbjct: 87  ESDGKWHHICTTWE--SSSGIAELWVDGKPGVRKGLAKGYTVKPGGSIILGQEQ-DSYGG 143

Query: 333 YTEAG--FEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTW--TGYDDINGG 388
             +A   F G++  + +W+  L  + E  K V    T      G +L W    Y +++GG
Sbjct: 144 GFDATQSFVGEIGDLNMWDSVL--SPEEIKSVYKGST---FSIGNILNWRALNY-EVHGG 197

Query: 389 V 389
           V
Sbjct: 198 V 198

This family form a doscoid pentameric structure. Human serum amyloid P demonstrates calcium-mediated ligand-binding. Length = 206

>gnl|CDD|215652 pfam00008, EGF, EGF-like domain

 Score = 34.3 bits (79), Expect = 0.004
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 103 PCQNGGSCVDMLDGFMCQCRPGFVG 127
           PC NGG+CVD   G+ C+C  G+ G
Sbjct: 6   PCSNGGTCVDTPGGYTCECPEGYTG 30

There is no clear separation between noise and signal. pfam00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains. Length = 32

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	418
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		2e-25
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		3e-16
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		5e-24
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		1e-15
4d90_A	143	Crystal Structure Of Del-1 Egf Domains Length = 143		1e-11
1dan_L	152	Complex Of Active Site Inhibited Human Blood Coagul		8e-07
2vj2_A	169	Human Jagged-1, Domains Dsl And Egfs1-3 Length = 16		1e-06
1w0y_L	142	Tf7a_3771 Complex Length = 142		1e-06
1o5d_L	152	Dissecting And Designing Inhibitor Selectivity Dete		1e-06
1z6j_L	142	Crystal Structure Of A Ternary Complex Of Factor Vi		1e-06
2ygq_A	324	Wif Domain-Epidermal Growth Factor (Egf)-Like Domai		2e-06
3h5c_B	317	X-Ray Structure Of Protein Z-Protein Z Inhibitor Co		3e-06
3h5c_B	317	X-Ray Structure Of Protein Z-Protein Z Inhibitor Co		5e-04
1dva_L	101	Crystal Structure Of The Complex Between The Peptid		3e-06
1j9c_L	95	Crystal Structure Of Tissue Factor-Factor Viia Comp		3e-06
1qfk_L	104	Structure Of Human Factor Viia And Its Implications		6e-06
1f7e_A	46	The First Egf-Like Domain From Human Blood Coagulat		8e-06
2puq_L	94	Crystal Structure Of Active Site Inhibited Coagulat		1e-05
1bf9_A	41	N-Terminal Egf-Like Domain From Human Factor Vii, N		2e-05
3qcw_A	1245	Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6),		5e-05
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		6e-05
3flp_A	217	Crystal Structure Of Native Heptameric Sap-Like Pen		7e-05
1edm_B	39	Epidermal Growth Factor-Like Domain From Human Fact		1e-04
3poy_A	1019	Crystal Structure Of The Alpha-Neurexin-1 Ectodomai		2e-04
3r05_A	1254	Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6),		2e-04
1x7a_L	146	Porcine Factor Ixa Complexed To 1-{3-[amino(Imino)		3e-04
1apo_A	42	Three-Dimensional Structure Of The Apo Form Of The		3e-04
2gy5_A	423	Tie2 Ligand-Binding Domain Crystal Structure Length		4e-04
1nfu_B	195	Crystal Structure Of Human Coagulation Factor Xa Co		6e-04

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 96  IDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDL 153
           +D+C+  + PC++ G C++ L  F CQC  G+ G +CE D++EC+S+PC  + T  CLD 
Sbjct: 5   VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDAT--CLDQ 62
Query: 154 DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
             +FQC C  GY GV CE N D+C S+PCL+ G C D + +F C+CP G+TG  C+ D+
Sbjct: 63  IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 133 DIDECL--SDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRD 190
           D+DEC   ++PC   G  KC++    F+C+C  GYTG  CE ++++C SNPC N   C D
Sbjct: 4   DVDECSLGANPCEHAG--KCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLD 61
Query: 191 GVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRRPLIQA 250
            + +F C C PG+ G  CE +   C + PC ++  C+D   +F C       G    +  
Sbjct: 62  QIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121
Query: 251 H 251
           H
Sbjct: 122 H 122

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 4/116 (3%)
Query: 96  IDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDL 153
           +D+C+  + PC++ G C++ L  F CQC  G+ G +CE D++EC+S+PC  + T  CLD 
Sbjct: 3   VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDAT--CLDQ 60
Query: 154 DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
             +FQC C  GY GV CE N D+C S+PCL+ G C D + +F C+CP G+TG  C+
Sbjct: 61  IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 116

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 133 DIDECL--SDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRD 190
           D+DEC   ++PC   G  KC++    F+C+C  GYTG  CE ++++C SNPC N   C D
Sbjct: 2   DVDECSLGANPCEHAG--KCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLD 59
Query: 191 GVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFC 235
            + +F C C PG+ G  CE +   C + PC ++  C+D   +F C
Sbjct: 60  QIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQC 104

>pdb|4D90|A Chain A, Crystal Structure Of Del-1 Egf Domains Length = 143

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 97  DDCASEPCQNGGSCVDML-DG-FMCQCRPGFVGLQCEADID------------ECLSDPC 142
           D C   PC+NGG C+  L DG F C+C  GF    C + ++             C  +PC
Sbjct: 1   DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60
Query: 143 SPEGTDKCL-----DLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTC 197
              GT +       D    + C+C  G+ G+ C+ NI++C+  PC NGGIC D VA ++C
Sbjct: 61  HNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSC 120
Query: 198 DCPPGWTGSRCE 209
           +CP  + G  C+
Sbjct: 121 ECPGEFMGRNCQ 132

>pdb|1DAN|L Chain L, Complex Of Active Site Inhibited Human Blood Coagulation Factor Viia With Human Recombinant Soluble Tissue Factor Length = 152

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 48  DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 107
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 108 TKRSCRCHEGYSLLADGVSCTPTVE 132

>pdb|2VJ2|A Chain A, Human Jagged-1, Domains Dsl And Egfs1-3 Length = 169

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 74  DLVGGFSC------SCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVG 127
           D  G ++C      +C  G+ G  C   I      P    GSC    D   C+C+ G+ G
Sbjct: 39  DFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSP--KHGSCKLPGD---CRCQYGWQG 93
Query: 128 LQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSN-PCLNGG 186
           L C    D+C+  P    G       +  +QC C   + G +C+ +++ C ++ PCLNGG
Sbjct: 94  LYC----DKCIPHPGCVHGI-----CNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGG 144
Query: 187 ICRD-GVAKFTCDCPPGWTGSRCE 209
            C + G  K+ C CP G++G  CE
Sbjct: 145 TCSNTGPDKYQCSCPEGYSGPNCE 168

>pdb|1W0Y|L Chain L, Tf7a_3771 Complex Length = 142

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 48  DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 107
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 108 TKRSCRCHEGYSLLADGVSCTPTVE 132

>pdb|1O5D|L Chain L, Dissecting And Designing Inhibitor Selectivity Determinants At The S1 Site Using An Artificial Ala190 Protease (Ala190 Upa) Length = 152

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 48  DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 107
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 108 TKRSCRCHEGYSLLADGVSCTPTVE 132

>pdb|1Z6J|L Chain L, Crystal Structure Of A Ternary Complex Of Factor Viia/tissue Factor/pyrazinone Inhibitor Length = 142

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 48  DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 107
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 108 TKRSCRCHEGYSLLADGVSCTPTVE 132

>pdb|2YGQ|A Chain A, Wif Domain-Epidermal Growth Factor (Egf)-Like Domains 1-3 Of Human Wnt Inhibitory Factor 1 In Complex With 1,2-Dipalmitoylphosphatidylcholine Length = 324

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 64/152 (42%), Gaps = 33/152 (21%)
Query: 69  PGTCTDLVGGFS-----CSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRP 123
           PG C +  GGF      C C  GF G HC+  +    +  C NGG CV    GF C C P
Sbjct: 152 PGGCRN--GGFCNERRICECPDGFHGPHCEKAL---CTPRCMNGGLCVT--PGF-CICPP 203
Query: 124 GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKF---QCECNVGYTGVMCETNIDDCKSN 180
           GF G+ C  D   C         +  C +    F   +C C  G  G  CE  I  C   
Sbjct: 204 GFYGVNC--DKANC---------STTCFNGGTCFYPGKCICPPGLEGEQCE--ISKC-PQ 249
Query: 181 PCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
           PC NGG C   + K  C C  G+ G  C K +
Sbjct: 250 PCRNGGKC---IGKSKCKCSKGYQGDLCSKPV 278

>pdb|3H5C|B Chain B, X-Ray Structure Of Protein Z-Protein Z Inhibitor Complex Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 99  CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK----CLDLD 154
           C S+PC + GSC D + G+ C C PG+ G  CE   +E     C PE TD     CL   
Sbjct: 8   CISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNE-----CHPERTDGCQHFCLPGQ 62
Query: 155 NKFQCECNVGY 165
             + C C  GY
Sbjct: 63  ESYTCSCAQGY 73

>pdb|3H5C|B Chain B, X-Ray Structure Of Protein Z-Protein Z Inhibitor Complex Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 177 CKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSC 215
           C S PCL+ G C+D +  +TC C PG+ GS CE     C
Sbjct: 8   CISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNEC 46

>pdb|1DVA|L Chain L, Crystal Structure Of The Complex Between The Peptide Exosite Inhibitor E-76 And Coagulation Factor Viia Length = 101

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 7   DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 66
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 67  TKRSCRCHEGYSLLADGVSCTPTVE 91

>pdb|1J9C|L Chain L, Crystal Structure Of Tissue Factor-Factor Viia Complex Length = 95

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LD 154
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D   
Sbjct: 1   DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTG 60
Query: 155 NKFQCECNVGYT----GVMCETNID 175
            K  C C+ GY+    GV C   ++
Sbjct: 61  TKRSCRCHEGYSLLADGVSCTPTVE 85

>pdb|1QFK|L Chain L, Structure Of Human Factor Viia And Its Implications For The Triggering Of Blood Coagulation Length = 104

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 99  CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LDNK 156
           CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D    K
Sbjct: 2   CASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTK 61
Query: 157 FQCECNVGYT----GVMCETNID 175
             C C+ GY+    GV C   ++
Sbjct: 62  RSCRCHEGYSLLADGVSCTPTVE 84

>pdb|1F7E|A Chain A, The First Egf-Like Domain From Human Blood Coagulation Fvii, Nmr, 20 Structures Length = 46

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDE 136
           D CAS PCQNGGSC D L  ++C C P F G  CE   D+
Sbjct: 4   DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD 43

>pdb|2PUQ|L Chain L, Crystal Structure Of Active Site Inhibited Coagulation Factor Viia In Complex With Soluble Tissue Factor Length = 94

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 99  CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK-CLD-LDNK 156
           CAS PCQNGGSC D L  ++C C P F G  CE   D+ L       G ++ C D    K
Sbjct: 2   CASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTK 61
Query: 157 FQCECNVGYT----GVMCETNID 175
             C C+ GY+    GV C   ++
Sbjct: 62  RSCRCHEGYSLLADGVSCTPTVE 84

>pdb|1BF9|A Chain A, N-Terminal Egf-Like Domain From Human Factor Vii, Nmr, 23 Structures Length = 41

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 23/35 (65%)
Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
           D CAS PCQNGGSC D L  ++C C P F G  CE
Sbjct: 4   DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 38

>pdb|3QCW|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No Splice Inserts Length = 1245

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 177 CKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKDI------GSC---TNMPCQNDANC 226
           C SNPC N G+CRDG  ++ CDC   G+ G  CE++       GS      +P       
Sbjct: 622 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEA 681
Query: 227 IDLFQDF----------FCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFHEYATI 276
            D+   F             S  S    R  + A    + V+L    +  F  ++    +
Sbjct: 682 EDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLFAGYN----L 737
Query: 277 NDGQWHHVAIVWTQGTLTLITE 298
           ND +WH V +V    +L L  +
Sbjct: 738 NDNEWHTVRVVRRGKSLKLTVD 759

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGY-TGVMCETN---IDDCKSNPCL-NGGI 187
           DIDEC   P    G  +C++    F+C+C+ GY +G M   N   ID+C+ +P L  GG+
Sbjct: 2   DIDECRISP-DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60
Query: 188 CRDGVAKFTCDCPPG 202
           C +    + C+CPPG
Sbjct: 61  CHNTEGSYRCECPPG 75

>pdb|3FLP|A Chain A, Crystal Structure Of Native Heptameric Sap-Like Pentraxin From Limulus Polyphemus Length = 217

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 276 INDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
           I  GQW+HV  VW+   G + +   G   G +EN G G  +   G VV+G+ +      +
Sbjct: 94  IELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIGGGF 153
Query: 334 TE-AGFEGKLTKVQIWNRAL 352
            E   + G+L+ +Q+W+ AL
Sbjct: 154 EEQESWSGELSDLQVWDEAL 173

>pdb|1EDM|B Chain B, Epidermal Growth Factor-Like Domain From Human Factor Ix Length = 39

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           D C+SNPCLNGG C+D +  + C CP G+ G  CE
Sbjct: 4   DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38

>pdb|3POY|A Chain A, Crystal Structure Of The Alpha-Neurexin-1 Ectodomain, Lns 2-6 Length = 1019

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 177 CKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKD 211
           C SNPC N G+CRDG  ++ CDC   G+ G  CE++
Sbjct: 397 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 432

>pdb|3R05|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), With Splice Insert Ss3 Length = 1254

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 177 CKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKD 211
           C SNPC N G+CRDG  ++ CDC   G+ G  CE++
Sbjct: 622 CLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 657

>pdb|1X7A|L Chain L, Porcine Factor Ixa Complexed To 1-{3-[amino(Imino) Methyl]phenyl}-N-[4-(1h-Benzimidazol-1-Yl)-2- Fluorophenyl]- 3-(Trifluoromethyl)-1h-Pyrazole-5-Carboxamide Length = 146

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD 211
           D C+ NPCLNGG+C+D +  + C C  G+ G  CE D
Sbjct: 49  DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD 85

>pdb|1APO|A Chain A, Three-Dimensional Structure Of The Apo Form Of The N- Terminal Egf-Like Module Of Blood Coagulation Factor X As Determined By Nmr Spectroscopy And Simulated Folding Length = 42

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           D C+ +PCLN G C+DG+  +TC C  G+ G  CE
Sbjct: 4   DQCEGHPCLNQGHCKDGIGDYTCTCAEGFEGKNCE 38

>pdb|2GY5|A Chain A, Tie2 Ligand-Binding Domain Crystal Structure Length = 423

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 83  CDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID-----EC 137
           C+    G  C HL   C +  C N G C +  D   C C PGF+G  CE   +       
Sbjct: 189 CEAQKWGPECNHL---CTA--CMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRT 241
Query: 138 LSDPCSPEGTDKCLD----LDNKFQCECNVGYTGVMCETNID------DCKSN-PCLNGG 186
             + CS  G + C      L + + C C  G+ G+ C           DCK    C NG 
Sbjct: 242 CKERCS--GQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGE 299
Query: 187 ICRDGVAKFT-CDCPPGWTGSRCEKD 211
           +C     +F  C C PGW G +CE++
Sbjct: 300 MC----DRFQGCLCSPGWQGLQCERE 321

>pdb|1NFU|B Chain B, Crystal Structure Of Human Coagulation Factor Xa Complexed With Rpr132747 Length = 195

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 136 ECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKF 195
           EC+ + CS E   +  +  +K     N    G  CET+       PC N G C+DG+ ++
Sbjct: 11  ECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETS-------PCQNQGKCKDGLGEY 63
Query: 196 TCDCPPGWTGSRCE 209
           TC C  G+ G  CE
Sbjct: 64  TCTCLEGFEGKNCE 77

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	418
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-53
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-49
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-36
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	9e-50
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	2e-39
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	1e-38
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	5e-44
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	6e-25
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	5e-15
2vh0_B	134	Activated factor XA light chain; serine protease,	4e-41
2vh0_B	134	Activated factor XA light chain; serine protease,	2e-40
2vh0_B	134	Activated factor XA light chain; serine protease,	1e-28
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	8e-37
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	2e-35
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	1e-23
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	1e-36
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	3e-33
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	3e-23
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-33
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	6e-32
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-31
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	5e-23
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	1e-14
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-07
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	4e-33
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	4e-32
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	2e-23
1aut_L	114	Activated protein C; serine proteinase, plasma cal	1e-24
1aut_L	114	Activated protein C; serine proteinase, plasma cal	3e-23
1aut_L	114	Activated protein C; serine proteinase, plasma cal	3e-21
1aut_L	114	Activated protein C; serine proteinase, plasma cal	9e-15
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-23
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-17
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-14
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	6e-04
3flp_A	217	SAP-like pentraxin; physiological doubly-stacked h	3e-21
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	1e-19
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	1e-13
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	7e-12
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	2e-10
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	1e-08
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	5e-08
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	7e-07
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	3e-06
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	1e-19
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	7e-16
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	6e-15
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	2e-10
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	1e-06
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-19
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	8e-15
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	4e-13
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	1e-12
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	5e-17
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	7e-14
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	6e-13
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	2e-10
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	7e-17
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	2e-15
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	4e-12
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	3e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	2e-16
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	3e-14
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	7e-13
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	2e-10
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	5e-16
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	1e-14
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	8e-07
3pvn_A	206	C-reactive protein; pentraxin family, immune syste	2e-15
3kqr_A	204	Serum amyloid P-component; glycoprotein, disulfide	2e-15
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	3e-15
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	1e-12
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	4e-08
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	7e-06
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	2e-14
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	3e-07
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	9e-04
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	4e-14
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	8e-11
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	2e-09
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	7e-05
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-04
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	6e-14
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	6e-10
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	1e-09
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-12
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-08
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	6e-04
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-11
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	4e-11
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-06
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-06
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	3e-06
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	9e-05
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-04
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	2e-10
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	4e-10
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	6e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	4e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	3e-06
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	3e-09
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	3e-08
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-06
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	2e-08
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	2e-05
4dqa_A	355	Uncharacterized protein; two domains structure, DU	1e-07
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-07
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-06
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	3e-06
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	3e-07
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	6e-04
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	4e-07
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	8e-07
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	6e-05
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	7e-07
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	1e-06
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	5e-05
2wjs_A	608	Laminin subunit alpha-2; integrin, secreted, coile	2e-06
2wjs_A	608	Laminin subunit alpha-2; integrin, secreted, coile	2e-04
2f83_A	625	Coagulation factor XI; protease, apple domain, hyd	3e-06
3v64_A	191	Low-density lipoprotein receptor-related protein;	5e-06
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	6e-06
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	9e-05
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	7e-06
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	3e-04
2v73_A	191	CBM40, putative EXO-alpha-sialidase; carbohydrate-	1e-05
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-05
1pz7_A	204	Agrin; structural protein; 1.42A {Gallus gallus} S	4e-05
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	4e-05
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	4e-05
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	6e-05
3v4v_B	503	Integrin beta-7; cell adhesion, madcam-1, membrane	6e-05
3v65_B	386	Low-density lipoprotein receptor-related protein;	9e-05
3v65_B	386	Low-density lipoprotein receptor-related protein;	3e-04
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	9e-05
3nxp_A	424	Prethrombin-1; allostery, blood coagulation, hydro	5e-04
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	1e-04
3t3p_B	472	Integrin beta-3; integrin, cell adhesion, blood cl	2e-04
1d2s_A	170	SHBG, sex hormone-binding globulin; steroid transp	3e-04
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	3e-04
1f5f_A	205	SHBG, sex hormone-binding globulin; jellyroll, sig	5e-04
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	9e-04

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score =  174 bits (443), Expect = 1e-53
 Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 4/129 (3%)

Query: 96  IDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDL 153
           +D+C+  + PC++ G C++ L  F CQC  G+ G +CE D++EC+S+PC  + T  CLD 
Sbjct: 5   VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDAT--CLDQ 62

Query: 154 DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG 213
             +FQC C  GY GV CE N D+C S+PCL+ G C D + +F C+CP G+TG  C+ D+ 
Sbjct: 63  IGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLH 122

Query: 214 SCTNMPCQN 222
              +     
Sbjct: 123 HILDAQKMV 131

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score =  163 bits (415), Expect = 1e-49
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 2/117 (1%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
           G C + +G F C C  G+TG  C+  +++C S PCQN  +C+D +  F C C PG+ G+ 
Sbjct: 19  GKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVH 78

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGG 186
           CE + DEC S PC   G   CLD  N+FQCEC  G+TG +C+ ++        +   
Sbjct: 79  CEVNTDECASSPCLHNGR--CLDKINEFQCECPTGFTGHLCQVDLHHILDAQKMVWN 133

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score =  130 bits (328), Expect = 1e-36
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 133 DIDEC--LSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRD 190
           D+DEC   ++PC   G   C++    F+C+C  GYTG  CE ++++C SNPC N   C D
Sbjct: 4   DVDECSLGANPCEHAGK--CINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLD 61

Query: 191 GVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCV 236
            + +F C C PG+ G  CE +   C + PC ++  C+D   +F C 
Sbjct: 62  QIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCE 107

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score =  166 bits (421), Expect = 9e-50
 Identities = 36/162 (22%), Positives = 49/162 (30%), Gaps = 4/162 (2%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
               +         D      +     D C + PCQN G C D L  + C C  GF G  
Sbjct: 16  TCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN 75

Query: 130 CEADIDE-CLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGIC 188
           CE    + C  D    +    C +  N   C C  GYT              PC    + 
Sbjct: 76  CELFTRKLCSLDNGDCDQF--CHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133

Query: 189 RDGVAKFTCDCPPGWT-GSRCEKDIGSCTNMPCQNDANCIDL 229
           R   +        G    S   K   +    P +N  + +D 
Sbjct: 134 RRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDF 175

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score =  138 bits (350), Expect = 2e-39
 Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 4/137 (2%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDD-CASEPCQNGGSCVDMLDGFMCQCRPGFVGL 128
           G C D +G ++C+C  GF GK+C+      C+ +       C +  +  +C C  G+   
Sbjct: 54  GKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLA 113

Query: 129 QCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYT-GVMCETNIDDCKSNPCLNGGI 187
                       PC  +         +  Q   + G     +     D    +P  N   
Sbjct: 114 DNGKACIPTGPYPCGKQTL--ERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFD 171

Query: 188 CRDGVAKFTCDCPPGWT 204
             D             T
Sbjct: 172 LLDFNQTQPERGDNNLT 188

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score =  136 bits (345), Expect = 1e-38
 Identities = 30/146 (20%), Positives = 42/146 (28%), Gaps = 8/146 (5%)

Query: 94  HLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDL 153
           HL  +C  E C    +                       D D+C + PC  +G   C D 
Sbjct: 7   HLERECMEETCSYEEAR-----EVFEDSDKTNEFWNKYKDGDQCETSPCQNQGK--CKDG 59

Query: 154 DNKFQCECNVGYTGVMCETNIDD-CKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
             ++ C C  G+ G  CE      C  +       C +      C C  G+T +   K  
Sbjct: 60  LGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 119

Query: 213 GSCTNMPCQNDANCIDLFQDFFCVSS 238
                 PC                SS
Sbjct: 120 IPTGPYPCGKQTLERRKRSVAQATSS 145

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score =  149 bits (378), Expect = 5e-44
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 19/140 (13%)

Query: 97  DDCASEPCQNGGSCVDML--DGFMCQCRPGFVGLQCEADID------------ECLSDPC 142
           D C   PC+NGG C+  L    F C+C  GF    C + ++             C  +PC
Sbjct: 1   DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60

Query: 143 SPEGT-----DKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTC 197
              GT         D    + C+C  G+ G+ C+ NI++C+  PC NGGIC D VA ++C
Sbjct: 61  HNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSC 120

Query: 198 DCPPGWTGSRCEKDIGSCTN 217
           +CP  + G  C+   G   +
Sbjct: 121 ECPGEFMGRNCQYKGGGHHH 140

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 98.6 bits (246), Expect = 6e-25
 Identities = 26/71 (36%), Positives = 36/71 (50%)

Query: 67  SIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV 126
                  D   G+ C C  GF G HCQH I++C  EPC+NGG C D++  + C+C   F+
Sbjct: 68  ISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM 127

Query: 127 GLQCEADIDEC 137
           G  C+      
Sbjct: 128 GRNCQYKGGGH 138

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 70.9 bits (174), Expect = 5e-15
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 21/83 (25%)

Query: 175 DDCKSNPCLNGGICRDGVAK--FTCDCPPGWTGSRCEKDIGS------------CTNMPC 220
           D C  NPC NGGIC  G+A   F+C+CP G+T   C   +              CT  PC
Sbjct: 1   DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPC 60

Query: 221 QNDANCI-------DLFQDFFCV 236
            N   C        D F  + C 
Sbjct: 61  HNGGTCEISEAYRGDTFIGYVCK 83

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score =  141 bits (358), Expect = 4e-41
 Identities = 30/121 (24%), Positives = 38/121 (31%), Gaps = 3/121 (2%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
               +         D      +     D C + PCQN G C D L  + C C  GF G  
Sbjct: 16  TCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN 75

Query: 130 CEADIDE-CLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGIC 188
           CE    + C  D    +    C +  N   C C  GYT              PC    + 
Sbjct: 76  CELFTRKLCSLDNGDCDQF--CHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE 133

Query: 189 R 189
           R
Sbjct: 134 R 134

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score =  139 bits (353), Expect = 2e-40
 Identities = 24/125 (19%), Positives = 35/125 (28%), Gaps = 3/125 (2%)

Query: 103 PCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECN 162
            C       +                    D D+C + PC  +G   C D   ++ C C 
Sbjct: 11  ECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGK--CKDGLGEYTCTCL 68

Query: 163 VGYTGVMCETNIDD-CKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQ 221
            G+ G  CE      C  +       C +      C C  G+T +   K        PC 
Sbjct: 69  EGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG 128

Query: 222 NDANC 226
                
Sbjct: 129 KQTLE 133

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score =  108 bits (271), Expect = 1e-28
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 137 CLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFT 196
            L   C  E      +   +   + +          + D C+++PC N G C+DG+ ++T
Sbjct: 7   HLERECMEETC--SYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYT 64

Query: 197 CDCPPGWTGSRCEKDIG-SCTNMPCQNDANCIDLFQDFFC 235
           C C  G+ G  CE      C+      D  C +      C
Sbjct: 65  CTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVC 104

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score =  130 bits (329), Expect = 8e-37
 Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 8/127 (6%)

Query: 70  GTCTDLVGGFSCSCDL------GFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRP 123
             C +    F  + ++                 D C   PC NGG C D ++ + C C+ 
Sbjct: 16  RECIEEKCSFEEAREVFENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQV 75

Query: 124 GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCL 183
           GF G  CE D    + +    +        D+K  C C  GY     + +       PC 
Sbjct: 76  GFEGKNCELDATCNIKNGRCKQFC--KTGADSKVLCSCTTGYRLAPDQKSCKPAVPFPCG 133

Query: 184 NGGICRD 190
              +   
Sbjct: 134 RVSVSHS 140

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score =  126 bits (319), Expect = 2e-35
 Identities = 27/130 (20%), Positives = 40/130 (30%), Gaps = 7/130 (5%)

Query: 99  CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQ 158
           C  E C    +                   +   D D+C  +PC   G   C D  N ++
Sbjct: 18  CIEEKCSFEEAR-----EVFENTEKTNEFWKQYVDGDQCEPNPCLNGGL--CKDDINSYE 70

Query: 159 CECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNM 218
           C C VG+ G  CE +      N            +K  C C  G+  +  +K        
Sbjct: 71  CWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130

Query: 219 PCQNDANCID 228
           PC   +    
Sbjct: 131 PCGRVSVSHS 140

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 95.1 bits (237), Expect = 1e-23
 Identities = 24/101 (23%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 136 ECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKF 195
           EC+ + CS E   +                       + D C+ NPCLNGG+C+D +  +
Sbjct: 17  ECIEEKCSFEEAREVF-------ENTEKTNEFWKQYVDGDQCEPNPCLNGGLCKDDINSY 69

Query: 196 TCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCV 236
            C C  G+ G  CE D                       C 
Sbjct: 70  ECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCS 110

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score =  130 bits (328), Expect = 1e-36
 Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 70  GTCTDLVGGFSCSCD-LGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGL 128
             C+                        D CAS PCQNGGSC D L  ++C C P F G 
Sbjct: 20  EQCSFEEAREIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR 79

Query: 129 QCEADIDECLSDPCSPEGTD-KCLDL-DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGG 186
            CE   D+ L       G +  C D    K  C C+ GY+ +    +       PC    
Sbjct: 80  NCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKIP 139

Query: 187 IC 188
           I 
Sbjct: 140 IL 141

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score =  120 bits (304), Expect = 3e-33
 Identities = 31/133 (23%), Positives = 44/133 (33%), Gaps = 13/133 (9%)

Query: 99  CASEPCQNGGSCVDMLDGFMCQCRP-GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKF 157
           C  E C    +        + +      +     +D D+C S PC   G+  C D    +
Sbjct: 17  CKEEQCSFEEAR------EIFKDAERTKLFWISYSDGDQCASSPCQNGGS--CKDQLQSY 68

Query: 158 QCECNVGYTGVMCETNIDDCKSNPCLNGG---ICRDGV-AKFTCDCPPGWTGSRCEKDIG 213
            C C   + G  CET+ DD       NGG    C D    K +C C  G++         
Sbjct: 69  ICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128

Query: 214 SCTNMPCQNDANC 226
                PC      
Sbjct: 129 PTVEYPCGKIPIL 141

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 93.9 bits (234), Expect = 3e-23
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 12/103 (11%)

Query: 136 ECLSDPCSPEGTDKCLDLDNKFQCECNV-GYTGVMCETNIDDCKSNPCLNGGICRDGVAK 194
           EC  + CS E          +   +         +  ++ D C S+PC NGG C+D +  
Sbjct: 16  ECKEEQCSFEEA--------REIFKDAERTKLFWISYSDGDQCASSPCQNGGSCKDQLQS 67

Query: 195 FTCDCPPGWTGSRCEKDIGSCTNMPCQN---DANCIDLFQDFF 234
           + C C P + G  CE           +N   +  C D      
Sbjct: 68  YICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKR 110

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score =  127 bits (321), Expect = 1e-33
 Identities = 46/153 (30%), Positives = 59/153 (38%), Gaps = 23/153 (15%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
           G C   V    C C  GF G +C        S  C NGG+C        C C PG  G Q
Sbjct: 191 GLC---VTPGFCICPPGFYGVNCDK---ANCSTTCFNGGTCFY---PGKCICPPGLEGEQ 241

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
           CE  I +C   PC   G   C+    K +C+C+ GY G +C   + +     C   G C 
Sbjct: 242 CE--ISKC-PQPCRNGGK--CI---GKSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCH 290

Query: 190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQN 222
           +      C C  GW G  C K   +       +
Sbjct: 291 EP---NKCQCQEGWHGRHCNKRYEASLIGTKHH 320

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score =  122 bits (308), Expect = 6e-32
 Identities = 50/162 (30%), Positives = 61/162 (37%), Gaps = 26/162 (16%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
           G C +      C C  GF G HC+       +  C NGG CV       C C PGF G+ 
Sbjct: 159 GFCNE---RRICECPDGFHGPHCEK---ALCTPRCMNGGLCVT---PGFCICPPGFYGVN 209

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
           C+       S  C   GT  C       +C C  G  G  CE  I  C   PC NGG C 
Sbjct: 210 CDKA---NCSTTCFNGGT--CF---YPGKCICPPGLEGEQCE--ISKC-PQPCRNGGKC- 257

Query: 190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQ 231
             + K  C C  G+ G  C K +       C     C +  +
Sbjct: 258 --IGKSKCKCSKGYQGDLCSKPVCEP---GCGAHGTCHEPNK 294

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score =  120 bits (303), Expect = 3e-31
 Identities = 43/163 (26%), Positives = 55/163 (33%), Gaps = 23/163 (14%)

Query: 69  PGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGL 128
                        +       K CQ          C+NGG C    +  +C+C  GF G 
Sbjct: 123 VIVMNSEGNTILKTPQNAIFFKTCQQ---AECPGGCRNGGFCN---ERRICECPDGFHGP 176

Query: 129 QCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGIC 188
            CE       +  C   G   C+       C C  G+ GV C+       S  C NGG C
Sbjct: 177 HCEKA---LCTPRCMNGGL--CV---TPGFCICPPGFYGVNCDK---ANCSTTCFNGGTC 225

Query: 189 RDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQ 231
                   C CPPG  G +CE         PC+N   CI   +
Sbjct: 226 ---FYPGKCICPPGLEGEQCEISKCPQ---PCRNGGKCIGKSK 262

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 98.0 bits (244), Expect = 5e-23
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 17/117 (14%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
           GTC        C C  G  G+ C+  I  C  +PC+NGG C+       C+C  G+ G  
Sbjct: 223 GTC---FYPGKCICPPGLEGEQCE--ISKC-PQPCRNGGKCIG---KSKCKCSKGYQGDL 273

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGG 186
           C   + E     C   GT  C +     +C+C  G+ G  C    +        +  
Sbjct: 274 CSKPVCEP---GCGAHGT--CHE---PNKCQCQEGWHGRHCNKRYEASLIGTKHHHH 322

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 73.3 bits (180), Expect = 1e-14
 Identities = 24/123 (19%), Positives = 31/123 (25%), Gaps = 12/123 (9%)

Query: 109 SCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGV 168
             V +L     +     VG  C    D                   N             
Sbjct: 88  VNVPLLGTVPHKASVVQVGFPCLGKQDGV---AAFEVDVIVMNSEGNTILKTPQNAIFFK 144

Query: 169 MCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCID 228
            C+          C NGG C +      C+CP G+ G  CEK         C N   C+ 
Sbjct: 145 TCQQAEC---PGGCRNGGFCNER---RICECPDGFHGPHCEKA---LCTPRCMNGGLCVT 195

Query: 229 LFQ 231
              
Sbjct: 196 PGF 198

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 11/97 (11%), Positives = 21/97 (21%), Gaps = 4/97 (4%)

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAK 194
                D          + L      + +V   G  C    D   +    +  +       
Sbjct: 74  SLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEV-DVIVMNSEGNT 132

Query: 195 FTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQ 231
                        C++    C    C+N   C +   
Sbjct: 133 ILKTPQNAIFFKTCQQAE--CPG-GCRNGGFCNERRI 166

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score =  121 bits (305), Expect = 4e-33
 Identities = 40/161 (24%), Positives = 58/161 (36%), Gaps = 20/161 (12%)

Query: 75  LVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADI 134
           + G  + +CD  + G  C      C       G    D        C  G++G +C   I
Sbjct: 13  IEGRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYACD--QNGNKTCMEGWMGPECNRAI 67

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAK 194
             C        G+  C        C C  G+ G+ C    D C  +P    GIC +    
Sbjct: 68  --CRQGCSPKHGS--CKL---PGDCRCQYGWQGLYC----DKCIPHPGCVHGICNEP--- 113

Query: 195 FTCDCPPGWTGSRCEKDIGSCT-NMPCQNDANCIDLFQDFF 234
           + C C   W G  C+KD+  C  + PC N   C +   D +
Sbjct: 114 WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKY 154

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score =  118 bits (298), Expect = 4e-32
 Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 62  DTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQC 121
              +D       D  G  + +C  G+ G  C      C        GSC        C+C
Sbjct: 35  RPRDDFFGHYACDQNG--NKTCMEGWMGPECN--RAICRQGCSPKHGSCKL---PGDCRC 87

Query: 122 RPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSN- 180
           + G+ GL C    D+C+  P    G   C   +  +QC C   + G +C+ +++ C ++ 
Sbjct: 88  QYGWQGLYC----DKCIPHPGCVHGI--C---NEPWQCLCETNWGGQLCDKDLNYCGTHQ 138

Query: 181 PCLNGGICRD-GVAKFTCDCPPGWTGSRCE 209
           PCLNGG C + G  K+ C CP G++G  CE
Sbjct: 139 PCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 27/133 (20%), Positives = 35/133 (26%), Gaps = 19/133 (14%)

Query: 99  CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQ 158
             S    + GS           C   + G  C      C                D    
Sbjct: 2   RGSHHHHHHGSIE---GRSAVTCDDYYYGFGCN---KFCRPRDDFFGHY----ACDQNGN 51

Query: 159 CECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNM 218
             C  G+ G  C   I  C+       G C+       C C  GW G  C+K    C   
Sbjct: 52  KTCMEGWMGPECNRAI--CRQGCSPKHGSCKLP---GDCRCQYGWQGLYCDK----CIPH 102

Query: 219 PCQNDANCIDLFQ 231
           P      C + +Q
Sbjct: 103 PGCVHGICNEPWQ 115

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 97.1 bits (242), Expect = 1e-24
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 5/105 (4%)

Query: 89  GKHCQHL-IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID--ECLSDPCSPE 145
           G  C  L ++   +  C   G+C+D +  F C CR G+ G  C+ ++    C  D     
Sbjct: 6   GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCT 65

Query: 146 GTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRD 190
               CL+     +C C  GY               PC       +
Sbjct: 66  HY--CLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 93.2 bits (232), Expect = 3e-23
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 5/105 (4%)

Query: 127 GLQCEA-DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID--DCKSNPCL 183
           G QC    ++   +  C   GT  C+D    F C+C  G+ G  C+  +   +C  +   
Sbjct: 6   GDQCLVLPLEHPCASLCCGHGT--CIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGG 63

Query: 184 NGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCID 228
               C + V    C C PG+               PC      ++
Sbjct: 64  CTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 87.5 bits (217), Expect = 3e-21
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLID--DCASEPCQNGGSCVDMLDGFMCQCRPGFVG 127
           GTC D +G FSC C  G+ G+ CQ  +   +C+ +       C++ +    C C PG+  
Sbjct: 26  GTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKL 85

Query: 128 LQCEADIDECLSDPC 142
                     +  PC
Sbjct: 86  GDDLLQCHPAVKFPC 100

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 69.4 bits (170), Expect = 9e-15
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 162 NVGYTGVMCETN-IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG--SCTNM 218
           +    G  C    ++   ++ C   G C DG+  F+CDC  GW G  C++++   +C+  
Sbjct: 1   SKHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLD 60

Query: 219 PCQNDANCIDLFQDFFC 235
                  C++      C
Sbjct: 61  NGGCTHYCLEEVGWRRC 77

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 9/43 (20%), Positives = 13/43 (30%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVD 112
             C + VG   CSC  G+               PC      ++
Sbjct: 66  HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFPCGRPWKRME 108

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 94.7 bits (236), Expect = 2e-23
 Identities = 31/150 (20%), Positives = 43/150 (28%), Gaps = 8/150 (5%)

Query: 63  TPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCR 122
            P   I G C +  G + C C   F     +    D  S  C              C   
Sbjct: 8   DPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNE 67

Query: 123 PGFV--GLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETN---IDDC 177
            G       C   + +    PC           + K  C    G+           ID+C
Sbjct: 68  IGVGVSKASCCCSLGKAWGTPCEMCPA--VNTSEYKILCPGGEGFRPNPITVILEDIDEC 125

Query: 178 KSNP-CLNGGICRDGVAKFTCDCPPGWTGS 206
           +  P    GG C +    F C CP G+  +
Sbjct: 126 QELPGLCQGGKCINTFGSFQCRCPTGYYLN 155

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 77.4 bits (191), Expect = 3e-17
 Identities = 23/142 (16%), Positives = 40/142 (28%), Gaps = 20/142 (14%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA---DIDECLSDPCSPEGTDKCLD 152
           +++C        G+CV+    ++C C P F          D        C  +       
Sbjct: 3   VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSG---NCYLDIR--PRG 57

Query: 153 LDNKFQCECNVGY--TGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSR--- 207
            +    C   +G   +   C  ++      PC           K  C    G+  +    
Sbjct: 58  DNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITV 117

Query: 208 -------CEKDIGSCTNMPCQN 222
                  C++  G C    C N
Sbjct: 118 ILEDIDECQELPGLCQGGKCIN 139

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 69.7 bits (171), Expect = 2e-14
 Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 4/105 (3%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGV 192
           D++ECL       G   C++    + C+C   +          D +S  C      R   
Sbjct: 2   DVNECLDPTTCISGN--CVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDN 59

Query: 193 AKFTCDCPPGWTGSR--CEKDIGSCTNMPCQNDANCIDLFQDFFC 235
               C    G   S+  C   +G     PC+             C
Sbjct: 60  GDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILC 104

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 172 TNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQ 231
           T++++C        G C +    + CDCPP +  +          +  C  D        
Sbjct: 1   TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNG 60

Query: 232 DFFC 235
           D  C
Sbjct: 61  DTAC 64

>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Length = 217

 Score = 90.5 bits (224), Expect = 3e-21
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 274 ATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
             I  GQW+HV  VW+   G + +   G   G +EN G G  +   G VV+G+ +     
Sbjct: 92  IEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIGG 151

Query: 332 AY-TEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGV 389
            +  +  + G+L+ +Q+W+ AL  T+++          P    G V++W       + GV
Sbjct: 152 GFEEQESWSGELSDLQVWDEALT-THQVSTVASCNGIRP---RGNVISWMEDSFVADDGV 207

Query: 390 ERVVPSHCS 398
              +   CS
Sbjct: 208 IVGISHMCS 216

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 90.7 bits (224), Expect = 1e-19
 Identities = 43/260 (16%), Positives = 77/260 (29%), Gaps = 37/260 (14%)

Query: 119 CQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCK 178
            + R  F G   +  +   L+ P                  +      G       ++ +
Sbjct: 144 VREREPFKGWIRDVRVQSSLALPVDSGEVK---------LDDEPPNSGGGSPCEAGEEGE 194

Query: 179 SNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVS 237
              CLNGG+C     +  CDC   G+ G  C +           ++  C DL Q+    S
Sbjct: 195 GGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQGKEEYIATFKGSEYFCYDLSQNPIQSS 254

Query: 238 SHSVQGR-RP------LIQAHSSGVQVSLFPELQDAFLAFH--------------EYATI 276
           S  +    +       ++    S   V+L   L++  ++                     
Sbjct: 255 SDEITLSFKTLQRNGLMLHTGKSADYVNL--ALKNGAVSLVINLGSGAFEALVEPVNGKF 312

Query: 277 NDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEA 336
           ND  WH V +      +T+  +G++            L    +  +G   P         
Sbjct: 313 NDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGG-SPSTADLPGSP 371

Query: 337 ---GFEGKLTKVQIWNRALD 353
               F G L +V   N  + 
Sbjct: 372 VSNNFMGCLKEVVYKNNDVR 391

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 71.8 bits (175), Expect = 1e-13
 Identities = 48/244 (19%), Positives = 74/244 (30%), Gaps = 33/244 (13%)

Query: 122 RPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNP 181
             G+VG         C+ D        +  D+    + +   G            C SNP
Sbjct: 579 NYGYVG---------CIRDLFI---DGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNP 626

Query: 182 CLNGGICRDGVAKFTCDCPP-GWTGSRCEKDI-----GSCTNMPCQNDANCIDLFQDFFC 235
           C N G+CRDG  ++ CDC   G+ G  CE++           M  Q         +D   
Sbjct: 627 CKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSL 686

Query: 236 -VSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFH-----------EYATINDGQWHH 283
              S    G      +  S   + L  EL    +                  +ND +WH 
Sbjct: 687 RFRSQRAYGILMATTSRDSADTLRL--ELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHT 744

Query: 284 VAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLT 343
           V +V    +L L  +   A   +  G    L  +            + +     F G L 
Sbjct: 745 VRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPS-NFIGHLQ 803

Query: 344 KVQI 347
            +  
Sbjct: 804 SLTF 807

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 66.4 bits (161), Expect = 7e-12
 Identities = 36/226 (15%), Positives = 64/226 (28%), Gaps = 30/226 (13%)

Query: 164  GYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKDIGSCTNMPCQN 222
            G     CE     C+ + C N G+C      F+CDC    ++G  C     +        
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 1066

Query: 223  DANCIDLFQDFFCVSSHSV-------QGRRPLIQAHSSGVQVS-LFPELQDAFLAFH--- 271
                     D     +  +       Q    L++  SS      L   +    +      
Sbjct: 1067 QITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNV 1126

Query: 272  ---------EYATINDGQWHHVAIVWTQGTLTL-ITEGLIAGKVENYGSGKSLPQYGWVV 321
                       A INDG++H V    + G  TL +    +  +               ++
Sbjct: 1127 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATII 1186

Query: 322  LGKPRPDNIKAYTEAGFEGKLTKVQIWNRA-LDFTNEIQKQVRDCR 366
            +G              F+G+L+ +       L+   E    +    
Sbjct: 1187 IGGKEQGQ-------PFQGQLSGLYYNGLKVLNMAAENDANIAIVG 1225

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 62.2 bits (150), Expect = 2e-10
 Identities = 46/347 (13%), Positives = 82/347 (23%), Gaps = 66/347 (19%)

Query: 115 DGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQ---CECNVGYTGVMCE 171
           D      +      Q    +D  L+     +     L  D+ F            G    
Sbjct: 314 DNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS 373

Query: 172 TNIDDCKSNPCLNGG-----ICRDGVAKFTCDCPPGWTGSRCEKDI----------GSCT 216
            N   C              + R            G    +CE              S  
Sbjct: 374 NNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFI 433

Query: 217 NMPCQNDANCIDLFQDF---------FCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAF 267
           ++P  N      +  DF                   +             ++  E+ D  
Sbjct: 434 SLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAI--EMLDGH 491

Query: 268 LAFH------------EYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLP 315
           L                   +NDG+W+HV       + T+    L        G  + L 
Sbjct: 492 LYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILD 550

Query: 316 QYGWVVLG---------KPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCR 366
               + LG             +   A    G+ G +  + I  ++ D     + Q     
Sbjct: 551 LDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQST--- 607

Query: 367 TEPVLHTGLVLTWTGYDDINGGVERVVPSHCS-QHICPPGYTGPECD 412
                  G+  + +         +  + + C    +C  G+    CD
Sbjct: 608 ------AGVKPSCSRETA-----KPCLSNPCKNNGMCRDGWNRYVCD 643

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 6/85 (7%)

Query: 59  VINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFM 118
            +  +    +      L             G       ++     C NGG C  + D  +
Sbjct: 158 RVQSSLALPVDSGEVKL-----DDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAV 212

Query: 119 CQCR-PGFVGLQCEADIDECLSDPC 142
           C C   GF G  C    +E ++   
Sbjct: 213 CDCSRTGFRGKDCSQGKEEYIATFK 237

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 14/126 (11%), Positives = 31/126 (24%), Gaps = 26/126 (20%)

Query: 134 IDECLSDPCSPEGTDKCLDLDNKFQ-------------------CECNVGYTGVMCETNI 174
           ID+  +     +   + + + +                            + G + +  +
Sbjct: 100 IDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPFKGWIRDVRV 159

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFF 234
               + P  +G +          D PP   G    +         C N   C  +     
Sbjct: 160 QSSLALPVDSGEVK-------LDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAV 212

Query: 235 CVSSHS 240
           C  S +
Sbjct: 213 CDCSRT 218

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 50.6 bits (120), Expect = 7e-07
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRP-GFVGL 128
           G   D+          G      +     C S PC+N G C D  + ++C C   G++G 
Sbjct: 593 GQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGR 652

Query: 129 QCEADIDECLSDPCS 143
            CE +      D   
Sbjct: 653 SCEREATVLSYDGSM 667

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 48.7 bits (115), Expect = 3e-06
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 86   GFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCR-PGFVGLQCEADIDECLSDPC 142
            G   + C+     C  + C N G C+   DGF C C    F G  C       +    
Sbjct: 1007 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG 1064

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 89.4 bits (221), Expect = 1e-19
 Identities = 36/177 (20%), Positives = 51/177 (28%), Gaps = 25/177 (14%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCA-----SEPCQNGGSCVDML----DGFMCQ 120
           G C +  G   C C  GF G+ C+   +         E C     C   +    D + C 
Sbjct: 209 GVCHEDTG--ECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCS 266

Query: 121 CRPGFVGLQCEADIDECLSDP-------CSPEGTDKCLDLDNKFQCECNVGYTGVMCET- 172
           C  G+ GLQC          P       C+          D    C C+ G+ G+ CE  
Sbjct: 267 CATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMC-----DRFQGCLCSPGWQGLQCERE 321

Query: 173 NIDDCKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKDIGSCTNMPCQNDANCID 228
            I                   KF   C   GW     E+      +    +  +   
Sbjct: 322 GIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNH 378

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 78.2 bits (192), Expect = 7e-16
 Identities = 33/178 (18%), Positives = 46/178 (25%), Gaps = 28/178 (15%)

Query: 69  PGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVD--MLDGFMCQCRPGFV 126
            G+    V        L     H Q   D         GG+          + +C     
Sbjct: 136 NGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRRCEAQKW 194

Query: 127 GLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCK-----SNP 181
           G +C       L   C   G   C +     +C C  G+ G  CE   +           
Sbjct: 195 GPEC-----NHLCTACMNNGV--CHEDTG--ECICPPGFMGRTCEKACELHTFGRTCKER 245

Query: 182 CLNGGICRDGVAK----FTCDCPPGWTGSRCEKDIGSCT-------NMPCQNDANCID 228
           C     C+  V      + C C  GW G +C +                C N   C  
Sbjct: 246 CSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR 303

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 75.1 bits (184), Expect = 6e-15
 Identities = 29/148 (19%), Positives = 44/148 (29%), Gaps = 13/148 (8%)

Query: 77  GGFSCSCDLGFTGKHCQHLIDDCA-------SEPCQNGGSCVDMLDGFMCQCRPGFVGLQ 129
             + CSC  G+ G  C                  C NG  C        C C PG+ GLQ
Sbjct: 261 DPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR---FQGCLCSPGWQGLQ 317

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNV-GYTGVMCETNIDDCKSNPCLNGGIC 188
           CE +    ++ P   +  D       KF   C   G+     E      K +  +     
Sbjct: 318 CEREGIPRMT-PKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEM-TLVKPDGTVLHPKD 375

Query: 189 RDGVAKFTCDCPPGWTGSRCEKDIGSCT 216
            +    F+            +  +  C+
Sbjct: 376 FNHTDHFSVAIFTIHRILPPDSGVWVCS 403

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 61.3 bits (148), Expect = 2e-10
 Identities = 23/130 (17%), Positives = 31/130 (23%), Gaps = 13/130 (10%)

Query: 104 CQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNV 163
               GS +  +                +   D  +       G              C  
Sbjct: 133 IYKNGSFIHSVPRHEVPDILEVHLPHAQPQ-DAGVYSARYIGGNLFTSAFTRLIVRRCEA 191

Query: 164 GYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI-----GSCTNM 218
              G  C           C+N G+C +      C CPPG+ G  CEK       G     
Sbjct: 192 QKWGPECN-----HLCTACMNNGVCHEDT--GECICPPGFMGRTCEKACELHTFGRTCKE 244

Query: 219 PCQNDANCID 228
            C     C  
Sbjct: 245 RCSGQEGCKS 254

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 18/113 (15%), Positives = 31/113 (27%), Gaps = 8/113 (7%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQH-LIDDCASEPCQNGGSCVDMLDGFMCQCR-PGFVG 127
             C    G   C C  G+ G  C+   I     +              F   C+  G+  
Sbjct: 299 EMCDRFQG---CLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPL 355

Query: 128 LQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSN 180
              E   +  L  P       K  +  + F       +  +  ++ +  C  N
Sbjct: 356 PTNE---EMTLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVN 405

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 21/142 (14%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGF--VG 127
           G C +  G F C C    T    + +  +     C              C+       + 
Sbjct: 15  GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID------GRCEININGATLK 68

Query: 128 LQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCET--NIDDCKSNPCL-N 184
            QC + +      PC+                 C  GY+ +      +ID+C+  P +  
Sbjct: 69  SQCCSSLGAAWGSPCTLCQ----------VDPICGKGYSRIKGTQCEDIDECEVFPGVCK 118

Query: 185 GGICRDGVAKFTCDCPPGWTGS 206
            G+C +    F C CP G T  
Sbjct: 119 NGLCVNTRGSFKCQCPSGMTLD 140

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 70.5 bits (173), Expect = 8e-15
 Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDN 155
           ID+C S PC NG  C +    F+C+C         +    E +   C     D       
Sbjct: 4   IDECESSPCING-VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID------- 55

Query: 156 KFQCECNVGY--TGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWT---GSRCEK 210
             +CE N+        C +++     +PC                C  G++   G++CE 
Sbjct: 56  -GRCEININGATLKSQCCSSLGAAWGSPCTLCQ--------VDPICGKGYSRIKGTQCE- 105

Query: 211 DIGSCTNMPCQ-NDANCIDLFQDFFCV 236
           DI  C   P    +  C++    F C 
Sbjct: 106 DIDECEVFPGVCKNGLCVNTRGSFKCQ 132

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 65.4 bits (160), Expect = 4e-13
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 132 ADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDG 191
           ADIDEC S PC       C +    F CEC+   T    +T   +     C    I    
Sbjct: 2   ADIDECESSPC---INGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVID--- 55

Query: 192 VAKFTCDCPPGWTGSRCEKDIGSCTNMPCQN 222
             +   +       S+C   +G+    PC  
Sbjct: 56  -GRCEININGATLKSQCCSSLGAAWGSPCTL 85

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 15/108 (13%)

Query: 65  NDSIPGTCTDLVGGFSCSCDLGF--TGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCR 122
            ++I GTC   V    C  ++        C   +      PC                C 
Sbjct: 42  IETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLC--------QVDPICG 93

Query: 123 PGFV---GLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTG 167
            G+    G QCE DIDEC   P   +    C++    F+C+C  G T 
Sbjct: 94  KGYSRIKGTQCE-DIDECEVFPGVCKNG-LCVNTRGSFKCQCPSGMTL 139

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 80.5 bits (199), Expect = 5e-17
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNK 156
             C S+PC + GSC D + G+ C C PG+ G  CE   +EC  +         CL     
Sbjct: 6   SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDG-CQHFCLPGQES 64

Query: 157 FQCECNVGYTGVMCETNIDDCKSNPC 182
           + C C  GY                C
Sbjct: 65  YTCSCAQGYRLGEDHKQCVPHDQCAC 90

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 70.9 bits (174), Expect = 7e-14
 Identities = 23/89 (25%), Positives = 31/89 (34%), Gaps = 3/89 (3%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGG-ICRDG 191
               C+S PC   G+  C D    + C C+ GY G  CE   ++C           C  G
Sbjct: 4   GGSPCISQPCLHNGS--CQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPG 61

Query: 192 VAKFTCDCPPGWTGSRCEKDIGSCTNMPC 220
              +TC C  G+      K         C
Sbjct: 62  QESYTCSCAQGYRLGEDHKQCVPHDQCAC 90

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 68.2 bits (167), Expect = 6e-13
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 172 TNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSC---TNMPCQNDANCID 228
                C S PCL+ G C+D +  +TC C PG+ GS CE     C       CQ+   C+ 
Sbjct: 3   KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHF--CLP 60

Query: 229 LFQDFFC 235
             + + C
Sbjct: 61  GQESYTC 67

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGS-CVDMLDGFMCQCRPGFVGL 128
           G+C D + G++C+C  G+ G +C+   ++C  E        C+   + + C C  G+   
Sbjct: 17  GSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLG 76

Query: 129 QCEADIDECLSDPCSP 144
           +            C  
Sbjct: 77  EDHKQCVPHDQCACGV 92

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 81.0 bits (199), Expect = 7e-17
 Identities = 29/139 (20%), Positives = 41/139 (29%), Gaps = 16/139 (11%)

Query: 91  HCQHLIDDCASEPCQNGGS-CVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDK 149
           +    I       C    + CV       C+C     G  C          P SP     
Sbjct: 286 YAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGS--- 342

Query: 150 CLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
            L +       C    + +      ++     C NGG C + V    C CP  +TG  CE
Sbjct: 343 YLPIPKGAANACIPSISSIGTNVCDNEL--LHCQNGGTCHNNV---RCLCPAAYTGILCE 397

Query: 210 KDIGSCTNMPCQNDANCID 228
           K         C+   +C  
Sbjct: 398 K----L---RCEEAGSCGS 409

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 76.8 bits (188), Expect = 2e-15
 Identities = 31/152 (20%), Positives = 43/152 (28%), Gaps = 17/152 (11%)

Query: 57  FPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDG 116
             V      +     C       +C C+   TG  C     +    P    GS + +  G
Sbjct: 291 IKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWS-PGSYLPIPKG 349

Query: 117 FMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDD 176
               C P    +      +E L   C   GT       N  +C C   YTG++CE     
Sbjct: 350 AANACIPSISSIGTNVCDNELL--HCQNGGT-----CHNNVRCLCPAAYTGILCEK---- 398

Query: 177 CKSNPCLNGGICRDGVAKFTCDCPPGWTGSRC 208
            +   C   G C           P G      
Sbjct: 399 LR---CEEAGSCGSDSG--QGAPPHGTHHHHH 425

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 66.4 bits (161), Expect = 4e-12
 Identities = 20/103 (19%), Positives = 31/103 (30%), Gaps = 4/103 (3%)

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICR 189
             +DI       C+   T  C+  ++K  CEC    TG  C     + +  P  + G   
Sbjct: 287 AISDIKVRGRCKCNLHAT-VCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPW-SPGSYL 344

Query: 190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQD 232
                    C P  +               CQN   C +  + 
Sbjct: 345 PIPKGAANACIPSISSIGTNVCDNELL--HCQNGGTCHNNVRC 385

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 2/67 (2%)

Query: 170 CETNIDDCKSNPCLN-GGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCID 228
             ++I       C     +C    +K TC+C    TG  C K   +    P     + + 
Sbjct: 287 AISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSP-GSYLP 345

Query: 229 LFQDFFC 235
           + +    
Sbjct: 346 IPKGAAN 352

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 31/164 (18%), Positives = 47/164 (28%), Gaps = 26/164 (15%)

Query: 69  PGTCTDLVGGFSCSCDLGFTGKHCQHLID-----DCASEPCQNGGSCVDMLDGFMCQCRP 123
           PG      G   C C  GF G  CQ         +     C   G C       +C+C  
Sbjct: 530 PGRGLCFCG--KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHS 583

Query: 124 GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETN-IDDCKSNPC 182
           G+    C+         PC    +  C +       +   G  G  C         SN  
Sbjct: 584 GYQLPLCQ--ECPGCPSPCGKYIS--CAEC-----LKFEKGPFGKNCSAACPGLQLSNNP 634

Query: 183 LNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANC 226
           + G  C++   + +  C   +T  +   D      +       C
Sbjct: 635 VKGRTCKE---RDSEGCWVAYTLEQQ--DGMDRYLIYVDESREC 673

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 74.0 bits (181), Expect = 3e-14
 Identities = 38/173 (21%), Positives = 54/173 (31%), Gaps = 37/173 (21%)

Query: 81  CSCDLGFTGKHCQHLID-------------DCASEPCQNGGSCVDMLDGFMCQCRPG--- 124
           C CD G+ GK+C+                 D  S  C   G CV       C C      
Sbjct: 448 CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVP 503

Query: 125 ---FVGLQCEADIDECLSDPCSP-EGTDKCLDLDNKFQCECNVGYTGVMCETNID----- 175
                G  CE D   C         G  + L      +C C+ G+ G  C+         
Sbjct: 504 GKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG--KCRCHPGFEGSACQCERTTEGCL 561

Query: 176 DCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCID 228
           + +   C   G CR       C+C  G+    C++        PC    +C +
Sbjct: 562 NPRRVECSGRGRCRCN----VCECHSGYQLPLCQE--CPGCPSPCGKYISCAE 608

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 69.4 bits (169), Expect = 7e-13
 Identities = 31/192 (16%), Positives = 49/192 (25%), Gaps = 31/192 (16%)

Query: 60  INDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMC 119
           +  T            +G              C+          C   G         +C
Sbjct: 393 VTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLEC----GIC 448

Query: 120 QCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLD-------NKFQCECNVG------YT 166
           +C  G++G  CE       S             +           QC C+          
Sbjct: 449 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 508

Query: 167 GVMCETNIDDC-----KSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCT----- 216
           G  CE +  +C     +       G+C  G     C C PG+ GS C+ +  +       
Sbjct: 509 GQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPR 564

Query: 217 NMPCQNDANCID 228
            + C     C  
Sbjct: 565 RVECSGRGRCRC 576

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 61.7 bits (149), Expect = 2e-10
 Identities = 31/169 (18%), Positives = 40/169 (23%), Gaps = 32/169 (18%)

Query: 81  CSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSD 140
             CD           +   A+E  Q     +  L              +C          
Sbjct: 376 GDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS 435

Query: 141 PCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID-------------DCKSNPCLNGGI 187
            C  +G  +C        C C+ GY G  CE                 D  S  C   G 
Sbjct: 436 LCHGKGFLEC------GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGD 489

Query: 188 CRDGVAKFTCDCPPGWT------GSRCEKDIGSC---TNMPCQNDANCI 227
           C  G     C C           G  CE D  +C       C      +
Sbjct: 490 CVCG----QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGL 534

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 72.1 bits (177), Expect = 5e-16
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 157 FQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVA--KFTCDCPPGWTGSRCEKDI 212
             C CN G         +  C    C NGG C+  +    F C CP G+ G  CE D 
Sbjct: 32  EYCWCNSGRAQC-HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 67.9 bits (166), Expect = 1e-14
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 64  PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDML--DGFMCQC 121
            + S             C C+ G    H    +  C+   C NGG+C   L    F+CQC
Sbjct: 17  QHQSWLRPVLRSNRVEYCWCNSGRAQCHSVP-VKSCSEPRCFNGGTCQQALYFSDFVCQC 75

Query: 122 RPGFVGLQCEADIDE 136
             GF G  CE D   
Sbjct: 76  PEGFAGKSCEIDTRA 90

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A Length = 91

 Score = 45.9 bits (109), Expect = 8e-07
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 11/81 (13%)

Query: 157 FQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCT 216
           +Q  C    T ++ + +       P L             C C  G         + SC+
Sbjct: 2   YQVICRDEKTQMIYQQH--QSWLRPVLRSN------RVEYCWCNSGRAQC-HSVPVKSCS 52

Query: 217 NMPCQNDANCIDL--FQDFFC 235
              C N   C     F DF C
Sbjct: 53  EPRCFNGGTCQQALYFSDFVC 73

>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Length = 206

 Score = 74.0 bits (181), Expect = 2e-15
 Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 11/121 (9%)

Query: 274 ATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
                    H+   W    G +    +G    + ++   G ++     ++LG+ +     
Sbjct: 86  VPEVTVAPVHICTSWESASGIVEFWVDGKPRVR-KSLKKGYTVGAEASIILGQEQDSFGG 144

Query: 332 AYTEA-GFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGV 389
            +  +    G +  V +W+  L   +EI              +  VL W     ++ G V
Sbjct: 145 NFEGSQSLVGDIGNVNMWDFVLS-PDEINTIYLGGP-----FSPNVLNWRALKYEVQGEV 198

Query: 390 E 390
            
Sbjct: 199 F 199

>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Length = 204

 Score = 73.5 bits (180), Expect = 2e-15
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 11/122 (9%)

Query: 273 YATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNI 330
                     H+ + W    G       G    K +    G  +     +VLG+ +    
Sbjct: 83  KVIEKFPAPVHICVSWESSSGIAEFWINGTPLVK-KGLRQGYFVEAQPKIVLGQEQDSYG 141

Query: 331 KAYTEA-GFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGG 388
             +  +  F G++  + +W+  L     I    +            +L W   + +I G 
Sbjct: 142 GKFDRSQSFVGEIGDLYMWDSVL-PPENILSAYQGTPLP-----ANILDWQALNYEIRGY 195

Query: 389 VE 390
           V 
Sbjct: 196 VI 197

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           + D C+SNPCLNGG C+D +  + C CP G+ G  CE
Sbjct: 2   DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 18/36 (50%), Positives = 21/36 (58%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
            D C S PC NGGSC D ++ + C C  GF G  CE
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE 171
           D D+C S+PC   G+  C D  N ++C C  G+ G  CE
Sbjct: 2   DGDQCESNPCLNGGS--CKDDINSYECWCPFGFEGKNCE 38

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G+C D +  + C C  GF GK+C+
Sbjct: 15 GSCKDDINSYECWCPFGFEGKNCE 38

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Length = 410

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 35/225 (15%), Positives = 63/225 (28%), Gaps = 30/225 (13%)

Query: 164 GYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCP-PGWTGSRCEKDIGSCTNMPCQN 222
           G     CE     C+ + C N G+C      F+CDC    ++G  C     +        
Sbjct: 175 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 234

Query: 223 DANCIDLFQDFFCVSSHSV-------QGRRPLIQAHSSGVQVSLFP-ELQDAFLAFH--- 271
                    D     +  +       Q    L++  SS          +    +      
Sbjct: 235 QITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNV 294

Query: 272 ---------EYATINDGQWHHVAIVWTQGTLTL-ITEGLIAGKVENYGSGKSLPQYGWVV 321
                      A INDG++H V    + G  TL +    +  +               ++
Sbjct: 295 GTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATII 354

Query: 322 LGKPRPDNIKAYTEAGFEGKLTKVQIWNRA-LDFTNEIQKQVRDC 365
           +G              F+G+L+ +       L+   E    +   
Sbjct: 355 IGGKEQGQ-------PFQGQLSGLYYNGLKVLNMAAENDANIAIV 392

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Length = 410

 Score = 51.5 bits (123), Expect = 3e-07
 Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 86  GFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCR-PGFVGLQCEADIDECLSDPCSP 144
           G   + C+     C  + C N G C+   DGF C C    F G  C       +      
Sbjct: 175 GQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGG 234

Query: 145 EGTDKCLDLDNKFQ 158
           + T K    D    
Sbjct: 235 QITYKWPPNDRPST 248

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Length = 410

 Score = 40.4 bits (94), Expect = 9e-04
 Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 37/158 (23%)

Query: 275 TINDGQWHHVAIVWTQGTLTLIT-EGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
            +ND QWH+V I      L  +  +  I  ++      ++L     + +G    +  K+ 
Sbjct: 83  PLNDNQWHNVMISRDTSNLHTVKIDTKITTQIT--AGARNLDLKSDLYIGGVAKETYKSL 140

Query: 334 TEA-----GFEGKLTKVQIWNRALDFTNEIQKQVRD-----------CRTEPVLHTGL-V 376
            +      GF+G L  V +  R  D  ++                  C+ +   + G+ +
Sbjct: 141 PKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCL 200

Query: 377 LTWTGYDDINGGVERVVPSHCSQHICP-PGYTGPECDQ 413
             W G+              C    C    ++GP C+ 
Sbjct: 201 QQWDGF-------------SCD---CSMTSFSGPLCND 222

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 69.7 bits (169), Expect = 4e-14
 Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 19/156 (12%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLID-----------DCASEPCQNGGSCVDMLDGFM 118
           G    +   F C C+ G          +            C              ++ + 
Sbjct: 16  GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYX 75

Query: 119 CQCRPGFVGLQCEADIDECLSDPCSPEG--TDKCLDLDNKFQCECNVGYTGVMCE----- 171
           C C  G+   +    +D C    C   G    + L       C C +G      +     
Sbjct: 76  CGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCT 135

Query: 172 -TNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGS 206
            T    C+     +  +C +    + C C  G+T  
Sbjct: 136 XTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFD 171

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 60.0 bits (144), Expect = 8e-11
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 19/157 (12%)

Query: 98  DCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA--DIDECLSD----PCSPEGT---D 148
               +     G  V M + F C C  G V L      + +EC  +     C   G    +
Sbjct: 6   AVTVDTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIEN 65

Query: 149 KCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGG----ICRDGVAKFTCDCPPGWT 204
                 N + C C  GYT       +D C+   C   G         +    C C  G  
Sbjct: 66  PDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXV 125

Query: 205 GSRCEK------DIGSCTNMPCQNDANCIDLFQDFFC 235
            +  ++         +C      ++  C ++   + C
Sbjct: 126 PNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXC 162

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 55.8 bits (133), Expect = 2e-09
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 8/114 (7%)

Query: 62  DTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGG----SCVDMLDGF 117
                 I       V  + C C  G+T      ++D C    C   G      +  +   
Sbjct: 57  GEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSA 116

Query: 118 MCQCRPGFVGLQCE----ADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTG 167
            C C  G V    +        E           + C +++  + C+C  G+T 
Sbjct: 117 GCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTF 170

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 42.3 bits (98), Expect = 7e-05
 Identities = 13/87 (14%), Positives = 20/87 (22%), Gaps = 11/87 (12%)

Query: 61  NDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLI------DDCASEPCQNGGSCVDML 114
           N   +          +    CSC +G                  C      +   C ++ 
Sbjct: 98  NCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVE 157

Query: 115 DGFMCQCRPGFVG----LQCEADIDEC 137
             + CQC  GF        C       
Sbjct: 158 GVYXCQCMEGFTFDXEXNVCL-GPHHH 183

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 41.9 bits (97), Expect = 1e-04
 Identities = 21/108 (19%), Positives = 29/108 (26%), Gaps = 13/108 (12%)

Query: 131 EADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID-----------DCKS 179
           EA+      D     G    + + N F C CN G   +   T  +            C  
Sbjct: 1   EAEASAVTVDTICXNGQ--LVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGE 58

Query: 180 NPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCI 227
                       V  + C C  G+T       +  C    C     CI
Sbjct: 59  FGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECI 106

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 72.8 bits (178), Expect = 6e-14
 Identities = 40/184 (21%), Positives = 55/184 (29%), Gaps = 41/184 (22%)

Query: 71  TCTDLVGGFSCSCDLGFTGKHCQHLIDDCA----------SEPCQNGGSCVDMLDGFMCQ 120
            C            +GF       +  DC           S  C NG       +  +C+
Sbjct: 405 GCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT---FECGVCR 461

Query: 121 CRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKF-----------QCECNVGYTGVM 169
           C PG++G QCE     C  +   P   D+C   + +            QC C+    G +
Sbjct: 462 CGPGWLGSQCE-----CSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKI 516

Query: 170 CET-------NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQN 222
                     +    K   C   G C  G     C C   WTG  C     + T M   N
Sbjct: 517 TGKYCECDDFSCVRYKGEMCSGHGQCSCG----DCLCDSDWTGYYCNCTTRTDTCM-SSN 571

Query: 223 DANC 226
              C
Sbjct: 572 GLLC 575

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 60.1 bits (145), Expect = 6e-10
 Identities = 31/153 (20%), Positives = 42/153 (27%), Gaps = 34/153 (22%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCA-----SEPCQNGGSCVDMLDGFMCQCRPG 124
           G C+       C CD  +TG +C                C   G C     G     +PG
Sbjct: 540 GQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC---GSCVCIQPG 592

Query: 125 FVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLN 184
             G  CE     C  D C+ +              EC     G + + N  +        
Sbjct: 593 SYGDTCE-KCPTC-PDACTFKKE----------CVECKKFDRGALHDENTCNRY------ 634

Query: 185 GGICRDGVAKFTCDCPPGWTGSRC-EKDIGSCT 216
              CRD +         G     C  K+   C 
Sbjct: 635 ---CRDEIESVKELKDTGKDAVNCTYKNEDDCV 664

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 30/179 (16%), Positives = 47/179 (26%), Gaps = 36/179 (20%)

Query: 69  PGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGL 128
             +C  L  G + S  +    + C    +   +         + +   F C C       
Sbjct: 383 LKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCA------ 436

Query: 129 QCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSN-------- 180
            C+A  +       +  GT +C        C C  G+ G  CE + +D + +        
Sbjct: 437 -CQAQAEPNSHRCNNGNGTFEC------GVCRCGPGWLGSQCECSEEDYRPSQQDECSPR 489

Query: 181 ----PCLNGGICRDGVAKFTCDCPPGWTGSRCEK-------DIGSCTNMPCQNDANCID 228
                C   G C  G     C C     G    K                C     C  
Sbjct: 490 EGQPVCSQRGECLCG----QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC 544

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGL- 128
                 +  +          +      ++C          C D+  G+ C C  GF  + 
Sbjct: 4   HHHHHPMSDYDIPTTENLYFQGAMG-TNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVA 62

Query: 129 --QCEADIDECLS-DPCSPEGTDKCLDLDNKFQCECNVGYT----GVMCE 171
             +CE DIDEC   D CS      C++L+  ++C+C  G+        C+
Sbjct: 63  QRRCE-DIDECQDPDTCS----QLCVNLEGGYKCQCEEGFQLDPHTKACK 107

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 106 NGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDP--CSPEGTDKCLDLDNKFQCECNV 163
                   +  +                 +ECL +   CS      C DL   ++C C  
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCS----YVCNDLKIGYECLCPD 56

Query: 164 GYTGV---MCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWT 204
           G+  V    CE +ID+C  +P     +C +    + C C  G+ 
Sbjct: 57  GFQLVAQRRCE-DIDEC-QDPDTCSQLCVNLEGGYKCQCEEGFQ 98

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 8/90 (8%)

Query: 150 CLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWT---GS 206
                + +                 ++C  N      +C D    + C CP G+      
Sbjct: 6   HHHPMSDYDIPTTENLYFQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQR 64

Query: 207 RCEKDIGSC-TNMPCQNDANCIDLFQDFFC 235
           RCE DI  C     C     C++L   + C
Sbjct: 65  RCE-DIDECQDPDTCS--QLCVNLEGGYKC 91

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 38/194 (19%), Positives = 56/194 (28%), Gaps = 29/194 (14%)

Query: 70  GTCTDLV-GGFSC-SCDLGFT--GKHCQHLIDDCASE-----PCQNGGSCVDMLDGFMC- 119
             C+    G +SC  C +GF   G HC+  +D+CA              CV+   GF C 
Sbjct: 15  AQCSSFPDGSWSCGFCPVGFLGNGTHCED-LDECALVPDICFSTSKVPRCVNTQPGFHCL 73

Query: 120 QCRPGFVGLQCEA--------------DIDECL--SDPCSP--EGTDKCLDLDNKFQCEC 161
            C P + G Q                   + C   +  C    E        D  ++CEC
Sbjct: 74  PCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCEC 133

Query: 162 NVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQ 221
             GY G       D           +C                 +  ++D          
Sbjct: 134 QTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDAC 193

Query: 222 NDANCIDLFQDFFC 235
           +D +  D   D   
Sbjct: 194 DDDDDNDGVTDEKD 207

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 41/178 (23%), Positives = 60/178 (33%), Gaps = 35/178 (19%)

Query: 96  IDDCASEPCQNGGSCVDMLDG-FMCQ-CRPGFV--GLQCEADIDECLSDP---CSPEGTD 148
            D C S PC  G  C    DG + C  C  GF+  G  CE D+DEC   P    S     
Sbjct: 3   PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVP 61

Query: 149 KCLDLDNKFQCE-CNVGYTGVMCE--------------TNIDDCK--SNPCLNGGIC--- 188
           +C++    F C  C   Y G                     + CK  ++ C     C   
Sbjct: 62  RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL 121

Query: 189 -RDGVAKFTCDCPPGWTG--SRCEKDI----GSCTNMPCQNDANCIDLFQDFFCVSSH 239
                  + C+C  G+ G    C +D         N+ C  +A    +  +   + + 
Sbjct: 122 GHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNS 179

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 29/127 (22%)

Query: 132 ADIDECLSDPCSPEGTDKCLDLDN-KFQC-ECNVGYT--GVMCETNIDDCKSN-----PC 182
           AD D CLS+PC P     C    +  + C  C VG+   G  C  ++D+C          
Sbjct: 1   ADPDGCLSNPCFPGAQ--CSSFPDGSWSCGFCPVGFLGNGTHC-EDLDECALVPDICFST 57

Query: 183 LNGGICRDGVAKFTCD-CPPGWTGSRCE--------------KDIGSCTNM--PCQNDAN 225
                C +    F C  CPP + G++                +    C +    C   A 
Sbjct: 58  SKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAE 117

Query: 226 CIDLFQD 232
           CI L   
Sbjct: 118 CIYLGHF 124

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 28/185 (15%), Positives = 48/185 (25%), Gaps = 25/185 (13%)

Query: 71  TCTDLVGGFSC-SCDLGFTGKHCQHLIDDCASE---PCQNGGSCVDMLDG---------- 116
            C +   GF C  C   + G     +  + A      C+    C D              
Sbjct: 62  RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL 121

Query: 117 -------FMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVM 169
                  + C+C+ G+ G       D  L     P     C         + N  +    
Sbjct: 122 GHFSDPMYKCECQTGYAGDGLICGEDSDLDGW--PNLNLVCATNATYHCIKDNCPHLPNS 179

Query: 170 CETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMP--CQNDANCI 227
            + + D        +     DGV     +C   +   + + D     +    C    N  
Sbjct: 180 GQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPA 239

Query: 228 DLFQD 232
            +  D
Sbjct: 240 QIDTD 244

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 32/181 (17%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 62  DTPNDSIP---GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFM 118
           D+  D  P     C           +        Q   D        +     D +    
Sbjct: 147 DSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEK 206

Query: 119 CQCRPGFVGLQCEADIDEC--LSDPCSPEGTDKCLDLDNKFQ-CECNVGYTGVMCETNID 175
             C+  F   Q + D DE     D C        +D DN  +   C+V   G       D
Sbjct: 207 DNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERD 266

Query: 176 DCKSNPCLNGG-ICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFF 234
           +C      +      DGV     +CP      + + D     +    N+    D  Q+  
Sbjct: 267 NCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQ 326

Query: 235 C 235
            
Sbjct: 327 D 327

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 25/171 (14%), Positives = 44/171 (25%), Gaps = 7/171 (4%)

Query: 61  NDTPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEP-----CQNGGSCVDMLD 115
           +   +        D V     +C L F  +   +  D+            N        +
Sbjct: 187 DGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNN 246

Query: 116 GFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID 175
           G    C     G     + D C       +  D   D        C + +     + + D
Sbjct: 247 GEGDACSVDIDGDDVFNERDNCPYVYN-TDQRDTDGDGVGDHCDNCPLVHNPDQTDVDND 305

Query: 176 DCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANC 226
                   N  I  DG      +CP     ++ + D     +  C  D + 
Sbjct: 306 LVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGD-ACDPDDDN 355

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 21/172 (12%), Positives = 39/172 (22%), Gaps = 15/172 (8%)

Query: 64  PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDC------ASEPCQNGGSCVDMLDGF 117
            +             + C C  G+ G       D         +  C    +   + D  
Sbjct: 114 KHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNC 173

Query: 118 MCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDL---DNKFQCECNVGYTGVMCETNI 174
                 G      +   D C  D  +   TD+  +     N  Q + +    G  C+   
Sbjct: 174 PHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCP 233

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANC 226
                    N              C     G     +  +C  +   +  + 
Sbjct: 234 YVH------NPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDT 279

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFV--GLQCEADIDECLSDPCSPEGTDKCLDL 153
           +D+C        G C++    + C+C  G++  G +C  D DEC        GT  C ++
Sbjct: 5   MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGNGT--CKNV 61

Query: 154 DNKFQCECNVGYTG 167
              F+C C  G+  
Sbjct: 62  IGGFECTCEEGFEP 75

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYT--GVMCETNIDDCKSNPCLNGGICRD 190
           D+DEC        G   C++ D  ++CEC  GY   G  C  + D+C        G C++
Sbjct: 4   DMDECKEPDVCKHGQ--CINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGNGTCKN 60

Query: 191 GVAKFTCDCPPGWTGSRCEKDIGSC 215
            +  F C C  G+        + +C
Sbjct: 61  VIGGFECTCEEGFEPG----PMMTC 81

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 63  TPNDSIPGTCTDLVGGFSCSCDLGFT--GKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQ 120
            P+    G C +  G + C C  G+   G  C    D+C+       G+C +++ GF C 
Sbjct: 10  EPDVCKHGQCINTDGSYRCECPFGYILAGNECVD-TDECSVGNPCGNGTCKNVIGGFECT 68

Query: 121 CRPGFVG 127
           C  GF  
Sbjct: 69  CEEGFEP 75

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 27/134 (20%), Positives = 42/134 (31%), Gaps = 29/134 (21%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHL--------IDDCASE---PCQNGGSCVDMLDGFM 118
              +  V   +C C+ GF+               I++CA+     C     C +    + 
Sbjct: 10  PQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYD 69

Query: 119 CQCRPGFV------------GLQCEADIDECLS--DPCSPEGTDKCLDLDNKFQCECNVG 164
           C C PG+                C+ D+DEC S    C       C +    + C C  G
Sbjct: 70  CVCSPGYEPVSGAKTFKNESENTCQ-DVDECSSGQHQCDSSTV--CFNTVGSYSCRCRPG 126

Query: 165 YTGVMCE-TNIDDC 177
           +        N  D 
Sbjct: 127 WKPRHGIPNNQKDT 140

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 54.1 bits (130), Expect = 4e-09
 Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 32/136 (23%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGL---------QCEADIDECLSD---PCS 143
              CA   C    SCV+      C+C PGF             C+ DI+EC +     C 
Sbjct: 2   SRGCA-RWCPQDSSCVN---ATACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCG 56

Query: 144 PEGTDKCLDLDNKFQCECNVGYTGVMCETN-----------IDDCKSNP--CLNGGICRD 190
                 C + +  + C C+ GY  V                +D+C S    C +  +C +
Sbjct: 57  KFSD--CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFN 114

Query: 191 GVAKFTCDCPPGWTGS 206
            V  ++C C PGW   
Sbjct: 115 TVGSYSCRCRPGWKPR 130

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 18/85 (21%)

Query: 70  GTCTDLVGGFSCSCDLGFT------------GKHCQHLIDDCASEP--CQNGGSCVDMLD 115
             C +  G + C C  G+                CQ  +D+C+S    C +   C + + 
Sbjct: 59  SDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQD-VDECSSGQHQCDSSTVCFNTVG 117

Query: 116 GFMCQCRPGFVGLQCE---ADIDEC 137
            + C+CRPG+              C
Sbjct: 118 SYSCRCRPGWKPRHGIPNNQKDTVC 142

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 96  IDDCASEPCQNGGSCVDMLDG-FMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLD 154
           +D C    C+    C  +    ++C C  GF  +  E    +   +  +      C D +
Sbjct: 4   VDPCFRANCEYQ--CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPAD--C-DPN 58

Query: 155 NKFQCECNVGYT---GVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGS 206
            +  CEC  GY    G +C  +ID+C  N     G+C +    F C C P    +
Sbjct: 59  TQASCECPEGYILDDGFICT-DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALA 111

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 23/108 (21%), Positives = 31/108 (28%), Gaps = 15/108 (13%)

Query: 76  VGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV---GLQCEA 132
              + C C  GF     +                C D      C+C  G++   G  C  
Sbjct: 21  QTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNTQASCECPEGYILDDGFICT- 78

Query: 133 DIDECLS-DPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKS 179
           DIDEC +   CS      C +L   F+C C                  
Sbjct: 79  DIDECENGGFCS----GVCHNLPGTFECICGPDSAL-----AGQIGTD 117

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 10/89 (11%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDN-KFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDG 191
            +D C    C  +    C  LD   + C C  G+  +  E +      N       C   
Sbjct: 3   PVDPCFRANCEYQ----CQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPN 58

Query: 192 VAKFTCDCPPGWT---GSRCEKDIGSCTN 217
               +C+CP G+    G  C  DI  C N
Sbjct: 59  TQ-ASCECPEGYILDDGFICT-DIDECEN 85

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* Length = 267

 Score = 53.9 bits (129), Expect = 2e-08
 Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 58/216 (26%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDD------CASEPCQNGGSCVDMLDGFMCQCRP 123
           G        ++    +GF G                 S P Q GG  V            
Sbjct: 44  GKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV------------ 91

Query: 124 GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDD------C 177
             +G + + +I   +S   +  G  K L     +  E  +G+   + + +          
Sbjct: 92  --LGARDKQNI-VAVSIKSNDGG--KTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGG 146

Query: 178 KSNPCLNGGIC-----------------------RDGVAKFTCDCPPGWTGSRCEKDIGS 214
            + P  +GG+                          G   +  + P G+ G+    D  +
Sbjct: 147 SAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYT 206

Query: 215 ------CTNMPCQNDANCIDLFQDFFCVSSHSVQGR 244
                  +  P       +   ++   V + +V   
Sbjct: 207 VENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASS 242

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* Length = 267

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 20/172 (11%), Positives = 43/172 (25%), Gaps = 52/172 (30%)

Query: 70  GTCTDLVGGFSCSCDLGFTGKHCQHLIDD------CASEPCQNGGSCVDMLDGFMCQCRP 123
           G        ++    +GF  +               ++ P  +GG  V            
Sbjct: 111 GKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWV------------ 158

Query: 124 GFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDD------C 177
             +G + + ++   +    +  G  K L     +  E  +G+ G +   +          
Sbjct: 159 --LGTRGKQNV-INVDAKSNDGG--KTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGG 213

Query: 178 KSNPCLNGGIC-----------------------RDGVAKFTCDCPPGWTGS 206
            + P   GG                           G   +  + P G+   
Sbjct: 214 STAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEGPIGFRAR 265

>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Length = 355

 Score = 52.1 bits (124), Expect = 1e-07
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 274 ATINDGQWHHVAIVW--TQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
             +   +W+HVA+ +    G   +   G      +    G          +G+       
Sbjct: 216 KPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGR---IYGF 272

Query: 332 AYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTW 379
            + E  F GK+++V++W+ A    N++++   +         GL L +
Sbjct: 273 KWGERPFHGKMSEVRVWSVART-ENQLKQ---NMLGVDPASEGLALYY 316

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 96  IDDCASEPCQNG-GSCVDMLDGFMCQCRPGFV-----GLQCEADIDECLSDPCSPEGTDK 149
           ID+C   P   G G CV+    F C+C  G+         C  DIDEC  DP    G   
Sbjct: 3   IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCRGG-V 60

Query: 150 CLDLDNKFQCECNVGYT 166
           C + +  ++CEC  G+ 
Sbjct: 61  CHNTEGSYRCECPPGHQ 77

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE----TNIDDCKSNPCL-NGGI 187
           DIDEC   P    G  +C++    F+C+C+ GY           +ID+C+ +P L  GG+
Sbjct: 2   DIDECRISPDLC-GRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGV 60

Query: 188 CRDGVAKFTCDCPPGWTGS 206
           C +    + C+CPPG   S
Sbjct: 61  CHNTEGSYRCECPPGHQLS 79

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 70  GTCTDLVGGFSCSCDLGFT-----GKHCQHLIDDCASEPCQ-NGGSCVDMLDGFMCQCRP 123
           G C +  G F C CD G+       K+C   ID+C  +P    GG C +    + C+C P
Sbjct: 16  GQCVNTPGDFECKCDEGYESGFMMMKNCMD-IDECQRDPLLCRGGVCHNTEGSYRCECPP 74

Query: 124 GF 125
           G 
Sbjct: 75  GH 76

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 51.6 bits (123), Expect = 3e-07
 Identities = 39/178 (21%), Positives = 62/178 (34%), Gaps = 39/178 (21%)

Query: 72  CTDLVGGFSC-SCDLGFTGKHCQHLIDDCASEPC-------QNGGSCVDMLDGFM----- 118
           C     G +C  C   +     + + D    EPC       +NGG C    D  +     
Sbjct: 348 CQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAG 407

Query: 119 -CQCRPGFVGLQCE-----------ADIDECLSDPCSPEGTDKCLDLDNKF--QCECNVG 164
            C+C+    G +C+            D   C S  C+P GT    +  +     C C   
Sbjct: 408 QCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRL 467

Query: 165 YTGVMCE----------TNIDDCKSNPCLNGGICRDGVAKFT--CDCPPGWTGSRCEK 210
            TG  C+           ++D C+   C  GG   +  ++ +  C C P   G +C +
Sbjct: 468 VTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 40/212 (18%), Positives = 57/212 (26%), Gaps = 66/212 (31%)

Query: 64  PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQH--------------LIDDCASEPCQ-NGG 108
           P D +      +V G  C C     G +C+                 +  A + C  N  
Sbjct: 265 PVDGVNEEVEGMVHG-HCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 323

Query: 109 SCVDMLDGFMCQ------------CRPGFVGLQCEA--------------DIDECLSDPC 142
           S     D  +              C+   +G  CE               D + C    C
Sbjct: 324 SSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTC 383

Query: 143 SPEGTDKCLDLDNKF---------QCECNVGYTGVMCE-----------TNIDDCKSNPC 182
            P G++     D            QC C +   G  C+            +   CKS  C
Sbjct: 384 DPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCAC 443

Query: 183 LNGGICRDG----VAKFTCDCPPGWTGSRCEK 210
              G    G         C C    TG RC++
Sbjct: 444 NPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%)

Query: 96  IDDCASEP--CQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDECLSDPCSPEGTDK 149
           +D+C+ +P  C     C ++   F C+C  G+        CE DIDEC  + C+      
Sbjct: 3   VDECSLKPSICGTA-VCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA----QL 56

Query: 150 CLDLDNKFQCECNV--GYT 166
           C++    + C C+   G+ 
Sbjct: 57  CVNYPGGYTCYCDGKKGFK 75

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 45.7 bits (109), Expect = 8e-07
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 13/73 (17%)

Query: 70  GTCTDLVGGFSCSCDLGFT----GKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQC--RP 123
             C ++ G F C C  G+      K C+  ID+C+   C     CV+   G+ C C  + 
Sbjct: 16  AVCKNIPGDFECECPEGYRYNLKSKSCED-IDECSENMCA--QLCVNYPGGYTCYCDGKK 72

Query: 124 GFV----GLQCEA 132
           GF        CE 
Sbjct: 73  GFKLAQDQKSCEV 85

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYT----GVMCETNIDDCKSNPCLNGGIC 188
           D+DEC   P    GT  C ++   F+CEC  GY        CE +ID+C  N C    +C
Sbjct: 2   DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMC--AQLC 57

Query: 189 RDGVAKFTCDC--PPGWT----GSRCE 209
            +    +TC C    G+        CE
Sbjct: 58  VNYPGGYTCYCDGKKGFKLAQDQKSCE 84

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 27/137 (19%), Positives = 40/137 (29%), Gaps = 26/137 (18%)

Query: 91  HCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKC 150
            C+          C   G         +C+C  G++G  CE       S           
Sbjct: 85  ECRCRDQSRDRSLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN 140

Query: 151 LDLD-------NKFQCECNVG------YTGVMCETNIDDCKSN-----PCLNGGICRDGV 192
             +           QC C+          G  CE +  +C+            G+C  G 
Sbjct: 141 NSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG- 199

Query: 193 AKFTCDCPPGWTGSRCE 209
               C C PG+ GS C+
Sbjct: 200 ---KCRCHPGFEGSACQ 213

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A Length = 162

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 170 CETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSC 215
           C T    C+   C   G C + +  +TC C PG+ G  CE      
Sbjct: 117 CYT--ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A Length = 162

 Score = 42.5 bits (100), Expect = 5e-05
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%)

Query: 79  FSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDEC 137
             C          C      C    C   G C++ +  + C C PGF G +CE   D+ 
Sbjct: 107 EHCLKKKHAL---CY--TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDD 160

>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Length = 608

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 30/212 (14%), Positives = 59/212 (27%), Gaps = 34/212 (16%)

Query: 173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDA----NCID 228
               C  +  ++          +     P + G      + +   +            + 
Sbjct: 352 KYSGCLKDIEISRT-------PYNILSSPDYVGVTKGCSLENVYTVSFPKPGFVELAAVS 404

Query: 229 LFQDF---FCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFH-------------- 271
           +          S+ +  G   +I   S G Q      L    L  H              
Sbjct: 405 IDVGTEINLSFSTRNESG---IILLGSGGGQAYYAIFLNKGRLEVHLSSGTRTMRKIVIK 461

Query: 272 -EYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNI 330
            E    +DG+ H V +  T+G  T+  +      ++N    + +      V G P     
Sbjct: 462 PEPNRFHDGREHSVHVERTRGIFTVQIDED-RRHMQNLTEEQPIEVKKLFVGGAPPEFQP 520

Query: 331 KAY-TEAGFEGKLTKVQIWNRALDFTNEIQKQ 361
                   F+G +  + I +  +DF   I  +
Sbjct: 521 SPLRNIPAFQGCVWNLVINSIPMDFAQPIAFK 552

>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Length = 608

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 33/226 (14%), Positives = 65/226 (28%), Gaps = 37/226 (16%)

Query: 177 CKSNPCLNGG-ICRDGVAKFTCDCPPGWTGSRCEKDIGSCT---------NMPCQNDANC 226
           C      +   I      +   DC       + E   G+           + P +   N 
Sbjct: 167 CMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFDGEGYALVSRPIRWYPNI 226

Query: 227 IDLFQDFFCVSSHSVQGRRPLIQAHSSGVQVSLFPELQDAFLAFH-----------EYAT 275
             +   F   SS ++     L+   +  ++  +  EL D  +                  
Sbjct: 227 STVMFKFRTFSSSAL-----LMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVVSNQN 281

Query: 276 INDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVL--------GKPRP 327
            NDG+W    +   Q    +    + + + EN  +  S   +G  +         G P  
Sbjct: 282 HNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTL 341

Query: 328 DNIKA-YTEAGFEGKLTKVQIWNRALDFTNEIQK--QVRDCRTEPV 370
            N++       + G L  ++I     +  +        + C  E V
Sbjct: 342 RNLRPEVNVKKYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENV 387

>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A Length = 625

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 10/122 (8%), Positives = 21/122 (17%), Gaps = 6/122 (4%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSD-----PCSPEGTDKCL 151
                    +G S           C   F         +  +        C    T+   
Sbjct: 267 TRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVR 326

Query: 152 DLDNKFQCE-CNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK 210
                +     +       C   +    S   +  G                   ++ + 
Sbjct: 327 CQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTKIKP 386

Query: 211 DI 212
            I
Sbjct: 387 RI 388

>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A Length = 191

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 6/99 (6%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLG----KPRPDNI 330
            +N  +W  +         +L           +      L   G + LG     P    +
Sbjct: 92  KVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQAL 151

Query: 331 KAYTEAGFEGKLTKVQIWNRALDFTNEIQKQ--VRDCRT 367
                 GF G L  V + +R L    +   +  +R C T
Sbjct: 152 PKAYGTGFVGCLRDVVVGHRQLHLLEDAVTKPELRPCPT 190

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A Length = 157

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 170 CETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
           C T    C +  C   G C + +  +TC C PG++G +CE+ +
Sbjct: 117 CYT--AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A Length = 157

 Score = 41.7 bits (98), Expect = 9e-05
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 80  SCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
            CS         C      C +  C   G CV+ ++ + C+C PGF GL+CE
Sbjct: 108 RCSKKKLAL---CY--TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A Length = 53

 Score = 42.1 bits (99), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 176 DCKSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCE 209
                 CLNGG+C   + +  +TC+C  G++G RC+
Sbjct: 8   SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A Length = 53

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 98  DCASEPCQNGGSC--VDMLDGFMCQCRPGFVGLQCE 131
                 C NGG C  ++ LD + C C  G+ G +C+
Sbjct: 8   SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43

>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Length = 191

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 267 FLAFHEYATINDGQWHHVAIVWTQGT-LTLITEG-LIA-GKVENYGSGKSLPQYGWVVLG 323
           F   H      +   + +A+   +G    +   G L+      N     ++      +  
Sbjct: 93  FNVHHSADVTFNRGINTLALKIEKGIGAKIFLNGSLVKTVSDPNIKFLNAINLNSGFIGK 152

Query: 324 KPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNEIQKQ 361
             R +    Y    F G +  + I+++ +   N + ++
Sbjct: 153 TDRANGYNEY---LFRGNIDFMNIYDKPVS-DNYLLRK 186

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 44.8 bits (105), Expect = 3e-05
 Identities = 33/145 (22%), Positives = 51/145 (35%), Gaps = 8/145 (5%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFV--GLQCEADIDECLS-DPCSPEGTDKCLDL 153
           ++C          C D+  G+ C C  GF     +   DIDEC   D CS      C++L
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ----LCVNL 56

Query: 154 DNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG 213
           +  ++C+C  G+             S   L     R  V K T D     +     +++ 
Sbjct: 57  EGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVV 115

Query: 214 SCTNMPCQNDANCIDLFQDFFCVSS 238
           +       N     DL Q   C + 
Sbjct: 116 ALDTEVASNRIYWSDLSQRMICSTQ 140

>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Length = 204

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 6/97 (6%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLG----KPRPDNI 330
            IN   W H+     Q   +L           +      L   G + LG          +
Sbjct: 105 PINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHKL 164

Query: 331 KAYTEAGFEGKLTKVQIWNRALDFTNEIQKQ--VRDC 365
                 GF G +  V +  + L    +      +  C
Sbjct: 165 PKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHC 201

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A Length = 63

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 175 DDCKSNPCLNGGICR-----DGVAKFTCDCPPGWTGSRCE 209
            + +   C+NGG C         +++ C C PG+TG+RC 
Sbjct: 7   AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* Length = 53

 Score = 39.8 bits (93), Expect = 4e-05
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 175 DDCKSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCE 209
                  CL+ G+C   + + K+ C+C  G+ G RC+
Sbjct: 7   PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43

>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B* Length = 503

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 19/113 (16%), Positives = 29/113 (25%), Gaps = 15/113 (13%)

Query: 103 PCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECN 162
             ++ G C  +                C  +            G  + L ++    C+CN
Sbjct: 402 KAEDRGQCNHVRINQTVTFWVSLQATHCLPEPHLLRL---RALGFSEELIVELHTLCDCN 458

Query: 163 VGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSC 215
                  C         +     G  + GV    C C PG  G  CE      
Sbjct: 459 -------CSDTQPQA-PHCSDGQGHLQCGV----CSCAPGRLGRLCESRGLEN 499

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 43.2 bits (101), Expect = 9e-05
 Identities = 24/132 (18%), Positives = 38/132 (28%), Gaps = 10/132 (7%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDECLSDP-CSPEGTDKC 150
            ++C          C  +     C C  G+     G  C+ D++EC  +  CS      C
Sbjct: 3   EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ----GC 57

Query: 151 LDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK 210
            + +  FQC C  GY       +       P L      D               +  E 
Sbjct: 58  TNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLEN 117

Query: 211 DIGSCTNMPCQN 222
            I    +   + 
Sbjct: 118 AIALDFHHRREL 129

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 41.7 bits (97), Expect = 3e-04
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYT----GVMCETNIDDCKSNPCLNGGIC 188
             + C  +        KC  +    QC C+ GY     G  C+ ++++C          C
Sbjct: 2   GEENCNVNNGGCA--QKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYC-SQGC 57

Query: 189 RDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSH 239
            +    F C C  G+      +   +    P    AN ID+ Q     S +
Sbjct: 58  TNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEY 108

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 43.3 bits (102), Expect = 9e-05
 Identities = 14/140 (10%), Positives = 24/140 (17%), Gaps = 9/140 (6%)

Query: 70  GTCTDLVGGFSC----SCDLGFTGKHCQHLI-DDCASEPCQNGGSCVDMLDGFMCQCRPG 124
           G       G  C    S       KH             C+N     + +  ++      
Sbjct: 25  GRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGD 84

Query: 125 FVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLN 184
           F           C        G     D D   +                       C  
Sbjct: 85  FGYCDLNY----CEEAVEEETGDGLDEDSDRAIEGATATSEYQTFFNPATFGSGEADCGL 140

Query: 185 GGICRDGVAKFTCDCPPGWT 204
             +      +   +     +
Sbjct: 141 RPLFEKKSLEDKTERELLES 160

>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 11/83 (13%), Positives = 19/83 (22%), Gaps = 13/83 (15%)

Query: 146 GTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTG 205
                         + N                 N C N     +GV  +    P  +  
Sbjct: 38  AWASAQAKALSKHQDFNSA----------VQLVENFCRNPDGDEEGVWCYVAGKPGDFGY 87

Query: 206 S---RCEKDIGSCTNMPCQNDAN 225
                CE+ +   T      D++
Sbjct: 88  CDLNYCEEAVEEETGDGLDEDSD 110

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} Length = 58

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 175 DDCKSNPCLNGGICR----DGVAKFTCDCPPGWTGSRCE 209
           +   +  CLN   C       +  ++C+C  G+ G RCE
Sbjct: 9   ETFDAWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47

>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B* Length = 472

 Score = 42.2 bits (98), Expect = 2e-04
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 18/87 (20%)

Query: 129 QCEADIDECLSDPC-----SPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCL 183
             EA +  C  +        P G    L +   F C+C        C+   +   S+ C 
Sbjct: 398 SIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCA-------CQAQAEPN-SHRCN 449

Query: 184 NG-GICRDGVAKFTCDCPPGWTGSRCE 209
           NG G    GV    C C PGW GS+CE
Sbjct: 450 NGNGTFECGV----CRCGPGWLGSQCE 472

>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Length = 170

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 14/93 (15%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP-DNIKA 332
             ++DG+WH V +     ++ L  +G    ++        +      + G   P  N++ 
Sbjct: 81  PRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGHPIMRIA---LGGLLFPASNLRL 137

Query: 333 YTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDC 365
                 +G L +    ++  + +      +R C
Sbjct: 138 PLVPALDGCLRRDSWLDKQAEISASAPTSLRSC 170

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A* Length = 188

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 20/117 (17%), Positives = 29/117 (24%), Gaps = 9/117 (7%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDN 155
           +         +    V +L           VG  C         D  +    D  +    
Sbjct: 75  LRSLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCL-----GXQDGVAAFEVDVIVMNSE 129

Query: 156 KFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
                               +C    C NGG C     +  C+CP G+ G  CE   
Sbjct: 130 GNTILXTPQNAIFFKTCQQAEC-PGGCRNGGFC---NERRICECPDGFHGPHCEGTK 182

>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Length = 205

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSG--KSLPQYGWVVLG--KPRPDNI 330
            ++DG+WH V +     ++ L  +G    ++                + LG       N+
Sbjct: 94  RLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNL 153

Query: 331 KAYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDC 365
           +       +G L +    ++  + +      +R C
Sbjct: 154 RLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSC 188

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587

 Score = 40.5 bits (94), Expect = 9e-04
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 97  DDCASEPCQNGGSCVDM-LDGFMCQC-RPGFVGLQCE 131
           + C S PCQN G C+    D + C C R GF G  C 
Sbjct: 2   NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	418
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.91
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.91
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.9
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.87
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.84
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.83
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.81
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	99.8
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.8
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.8
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.76
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.75
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	99.75
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.73
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	99.73
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.73
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.71
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.7
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.68
3v64_A	191	Low-density lipoprotein receptor-related protein;	99.68
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.67
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.66
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.66
1pz7_A	204	Agrin; structural protein; 1.42A {Gallus gallus} S	99.64
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	99.64
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.63
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.63
3pve_A	189	Agrin, AGRN protein; mRNA splicing, structural gen	99.62
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.61
3sh4_A	195	LG3 peptide; actin disassambly, integrin alpha12 B	99.6
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.58
2r16_A	182	Neurexin-1-alpha; beta-sandwich, cell adhesion, sp	99.58
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.57
1d2s_A	170	SHBG, sex hormone-binding globulin; steroid transp	99.56
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.56
3bod_A	178	Neurexin-1-alpha; neurexin1D, LNS6, alternative sp	99.54
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.52
1f5f_A	205	SHBG, sex hormone-binding globulin; jellyroll, sig	99.52
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.51
2h0b_A	184	Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A	99.5
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.45
2jd4_A	383	Laminin subunit alpha-1; basement membrane protein	99.43
1h30_A	422	GAS6, growth-arrest-specific protein; laminin G-do	99.42
2r1d_A	226	Neurexin-1-beta, neurexin I-beta; beta-sandwich, c	99.42
2r1b_A	220	Neurexin-1-beta, neurexin I-beta; beta-sandwich, c	99.41
1dyk_A	394	Laminin alpha 2 chain; metal binding protein; 2.0A	99.41
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	99.4
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.39
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.39
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.36
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.35
2jd4_A	383	Laminin subunit alpha-1; basement membrane protein	99.35
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.35
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.34
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.33
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.32
1dyk_A	394	Laminin alpha 2 chain; metal binding protein; 2.0A	99.32
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.3
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.3
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	99.3
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.3
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.27
2vh0_B	134	Activated factor XA light chain; serine protease,	99.26
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.26
2wjs_A	608	Laminin subunit alpha-2; integrin, secreted, coile	99.24
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.22
2vh0_B	134	Activated factor XA light chain; serine protease,	99.21
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.19
2wjs_A	608	Laminin subunit alpha-2; integrin, secreted, coile	99.1
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.08
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.03
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.02
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.01
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.99
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.98
3flp_A	217	SAP-like pentraxin; physiological doubly-stacked h	98.94
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.91
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.89
1h30_A	422	GAS6, growth-arrest-specific protein; laminin G-do	98.87
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.86
3kqr_A	204	Serum amyloid P-component; glycoprotein, disulfide	98.85
3pvn_A	206	C-reactive protein; pentraxin family, immune syste	98.81
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.81
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.81
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.78
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.75
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.7
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.69
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.66
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.65
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.65
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.61
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.54
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.45
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.41
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.41
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.41
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.39
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.37
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.37
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.32
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.28
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.27
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.25
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.18
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.17
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.16
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.11
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.09
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.08
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.08
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.07
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	98.04
4dqa_A	355	Uncharacterized protein; two domains structure, DU	98.03
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.03
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.95
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.83
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.68
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.67
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	97.61
1za4_A	251	Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cel	97.61
2erf_A	209	Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sug	97.59
1ob1_C	99	Major merozoite surface protein; immune system, im	97.58
2uur_A	245	Collagen alpha-1(IX) chain; glycoprotein, hydroxyl	97.56
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.52
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.5
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.46
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.4
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.4
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.36
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.29
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.22
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	97.13
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.1
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.05
2v73_A	191	CBM40, putative EXO-alpha-sialidase; carbohydrate-	97.04
1ob1_C	99	Major merozoite surface protein; immune system, im	97.02
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.93
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.83
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.76
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.74
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	96.66
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.58
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.52
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	96.48
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	96.41
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.4
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	96.29
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.17
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	96.13
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	96.11
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	96.04
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.04
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	96.04
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	96.03
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	95.77
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	95.65
1szb_A	170	Mannose binding lectin-associated serine protease-	95.6
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	95.42
2wph_E	59	Coagulation factor IXA light chain; serine proteas	95.39
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	95.28
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	95.26
2jkb_A	686	Sialidase B; intramolecular trans-sialidase, lyase	95.01
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	94.99
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	94.97
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	94.96
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	94.81
2sli_A	679	Intramolecular trans-sialidase; hydrolase, neurami	94.37
1a8d_A	452	Tetanus neurotoxin; clostridial, ganglioside bindi	94.13
1szb_A	170	Mannose binding lectin-associated serine protease-	94.08
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	94.04
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	93.97
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	93.75
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	93.5
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	92.24
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.11
1nzi_A	159	Complement C1S component; calcium, innate immunity	91.47
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	90.73
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	88.62
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	88.36
3rsj_A	413	BONT/F; clostridium botulinum type F, ganglioside	86.89
1nzi_A	159	Complement C1S component; calcium, innate immunity	86.1
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	85.58
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	83.33
1ms9_A	648	Trans-sialidase; trans-glycosylation, protein-acrb	82.78
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	82.68
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	82.54
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	82.31
1epw_A	1290	Bontoxilysin B, botulinum neurotoxin type B; zinc,	81.27
1nt0_A	286	MAsp2, mannose-binding protein associated serine p	81.03

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.91  E-value=1.4e-24  Score=175.65  Aligned_cols=125  Identities=44%  Similarity=1.104  Sum_probs=108.0

Q ss_pred             CccCCCCCC--CCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCcc
Q psy3619          92 CQHLIDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVM  169 (418)
Q Consensus        92 C~~~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~  169 (418)
                      |+ |+|+|+  .+||.++++|+++.++|+|.|++||+|..|+.++++|..++|..++.  |++..++|.|.|++||+|..
T Consensus         2 c~-dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~--C~~~~g~~~C~C~~G~~G~~   78 (135)
T 2vj3_A            2 AQ-DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDAT--CLDQIGEFQCICMPGYEGVH   78 (135)
T ss_dssp             -C-CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCE--EEECSSCEEEECCTTEESSS
T ss_pred             Cc-ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCE--EeCCCCCceeeCCCCCcCCc
Confidence            44 799998  67899999999999999999999999999988899999888887765  99999999999999999999


Q ss_pred             ceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcCCC
Q psy3619         170 CETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMP  219 (418)
Q Consensus       170 C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~  219 (418)
                      |+.++++|..++|.++++|++..++|+|.|++||+|..|+.++++|...+
T Consensus        79 C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~~  128 (135)
T 2vj3_A           79 CEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDAQ  128 (135)
T ss_dssp             SCEECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC------
T ss_pred             ceecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCCC
Confidence            98888999999999999999999999999999999999998899887653

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.91  E-value=5.2e-24  Score=172.22  Aligned_cols=115  Identities=40%  Similarity=1.010  Sum_probs=104.5

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCS  143 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~  143 (418)
                      .+|.++|+|+++.++|+|.|++||+|..|+.++++|...||.++++|+++.++|+|.|++||+|..|+.++++|...+|.
T Consensus        13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~   92 (135)
T 2vj3_A           13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCL   92 (135)
T ss_dssp             CSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCST
T ss_pred             CCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcC
Confidence            57999999999999999999999999999878999999999999999999999999999999999998889999999998


Q ss_pred             CCCcceeecCCCCeeeecCCCCcCccceecCCCCCCC
Q psy3619         144 PEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSN  180 (418)
Q Consensus       144 ~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~  180 (418)
                      .++.  |++..++|+|.|++||+|..|+.++++|...
T Consensus        93 ~~g~--C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~  127 (135)
T 2vj3_A           93 HNGR--CLDKINEFQCECPTGFTGHLCQVDLHHILDA  127 (135)
T ss_dssp             TTCE--EEECSSCEEEECCTTEESSSSCEECC-----
T ss_pred             CCCE--eECCCCCeEEECCCCCcCCccCccCccccCC
Confidence            8775  9999999999999999999999889999764

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.90  E-value=8e-25  Score=187.48  Aligned_cols=142  Identities=20%  Similarity=0.570  Sum_probs=124.4

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccC---CCccCCCCCC----CCCCCCCCeeecCC-----CCeeeeCCCCccCCccc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGK---HCQHLIDDCA----SEPCQNGGSCVDML-----DGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~---~C~~~~~~C~----~~~C~~~~~C~~~~-----g~~~C~C~~G~~g~~C~  131 (418)
                      .+|. +|+|+++.++|+|.|++||+|.   .|+ ++++|+    ..||.++++|+++.     ++|+|.|++||+|..+.
T Consensus        11 ~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~   88 (186)
T 1z1y_A           11 TICX-NGQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT   88 (186)
T ss_dssp             CCCB-TEEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE
T ss_pred             CCCC-CCEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC
Confidence            5787 5699999999999999999987   898 899999    78899999999998     89999999999988554


Q ss_pred             cCCCcCCCCCCCCCCcceee----cCCCCeeeecCCCCcC-----ccceec-CCCCCCCCC-CCCcEEEeCCCCeEEeCC
Q psy3619         132 ADIDECLSDPCSPEGTDKCL----DLDNKFQCECNVGYTG-----VMCETN-IDDCKSNPC-LNGGICRDGVAKFTCDCP  200 (418)
Q Consensus       132 ~~~~~C~~~~c~~~~~~~C~----~~~~~~~C~C~~G~~g-----~~C~~~-~~~C~~~~C-~~~~~C~~~~~~~~C~C~  200 (418)
                      ..+++|..++|..++.  |+    +..++|+|.|++||+|     ..|+.. +++|. ++| .++++|+++.++|+|.|+
T Consensus        89 C~~d~C~~~~C~~~g~--C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~  165 (186)
T 1z1y_A           89 CVLDVCQYXNCGESGE--CIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCM  165 (186)
T ss_dssp             EEEGGGTTCCCCTTEE--EEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEEC
T ss_pred             CCCCcCcCCCCCCCCE--EeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECC
Confidence            4579999998877665  88    7888999999999998     788743 57898 489 889999999999999999


Q ss_pred             CCcCCCCcCc
Q psy3619         201 PGWTGSRCEK  210 (418)
Q Consensus       201 ~G~~G~~C~~  210 (418)
                      +||+|..++.
T Consensus       166 ~G~~g~~~~~  175 (186)
T 1z1y_A          166 EGFTFDXEXN  175 (186)
T ss_dssp             TTCEEETTTT
T ss_pred             CCCccCcccc
Confidence            9999998874

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.87  E-value=4.6e-23  Score=176.50  Aligned_cols=143  Identities=26%  Similarity=0.616  Sum_probs=124.5

Q ss_pred             CCCCCCCCCCeeecCCCCeeeeCCCCccCC---ccccCCCcCC----CCCCCCCCcceeecCC-----CCeeeecCCCCc
Q psy3619          99 CASEPCQNGGSCVDMLDGFMCQCRPGFVGL---QCEADIDECL----SDPCSPEGTDKCLDLD-----NKFQCECNVGYT  166 (418)
Q Consensus        99 C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~---~C~~~~~~C~----~~~c~~~~~~~C~~~~-----~~~~C~C~~G~~  166 (418)
                      ...+||.+ ++|+++.++|+|.|++||+|.   .|+ ++++|.    ..+|..++.  |++..     ++|+|.|++||+
T Consensus         8 ~~~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~--C~~~~~~~~~g~y~C~C~~G~~   83 (186)
T 1z1y_A            8 TVDTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQ--CIENPDPAQVNMYXCGCIEGYT   83 (186)
T ss_dssp             CTTCCCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEE--EEECSSTTSSCSEEEEECTTEE
T ss_pred             CCCCCCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCE--eecCCCCcCCCCEECCCCCCCc
Confidence            34678885 599999999999999999987   897 889998    677877655  99998     899999999999


Q ss_pred             CccceecCCCCCCCCCCCCcEEE----eCCCCeEEeCCCCcCC-----CCcCcC-CCCCcCCCC-CCCCeEeecCCCeEE
Q psy3619         167 GVMCETNIDDCKSNPCLNGGICR----DGVAKFTCDCPPGWTG-----SRCEKD-IGSCTNMPC-QNDANCIDLFQDFFC  235 (418)
Q Consensus       167 g~~C~~~~~~C~~~~C~~~~~C~----~~~~~~~C~C~~G~~G-----~~C~~~-~~~C~~~~c-~~~~~C~~~~~~~~c  235 (418)
                      |..++..+++|..++|.++++|+    +..++|+|.|++||+|     ..|+.. +++|.. +| .+++.|+++.++|+|
T Consensus        84 g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~n~~g~y~C  162 (186)
T 1z1y_A           84 LXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCXNVEGVYXC  162 (186)
T ss_dssp             EETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEEEETTEEEE
T ss_pred             cCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCcceecCCCCeee
Confidence            98655457999999999999999    8888999999999998     788742 589984 99 899999999999999


Q ss_pred             EeCCCCCCCcc
Q psy3619         236 VSSHSVQGRRP  246 (418)
Q Consensus       236 ~c~~~~~~~~~  246 (418)
                      .|++||.+...
T Consensus       163 ~C~~G~~g~~~  173 (186)
T 1z1y_A          163 QCMEGFTFDXE  173 (186)
T ss_dssp             EECTTCEEETT
T ss_pred             ECCCCCccCcc
Confidence            99999987653

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.84  E-value=4.5e-26  Score=199.97  Aligned_cols=162  Identities=14%  Similarity=0.176  Sum_probs=108.3

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCccCCCccCCCC------CCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCC
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDD------CASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECL  138 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~------C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~  138 (418)
                      +|.++|+|++..++|+|.|++||+|..|+.++++      |...||.++++|              |.|..|+ ..++|+
T Consensus        39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc--------------~~G~~c~-~~~eC~  103 (267)
T 4fbr_A           39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW--------------VLGARDK-QNIVAV  103 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEE--------------ECCCCSS-CCEEEE
T ss_pred             CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCee--------------eccCccc-cccccC
Confidence            5888999999999999999999999999888887      444444333332              2344454 334555


Q ss_pred             CCCCCCCCcceeecCCCCeeeecCCCCcCccceecCCC-----------------------------CCCCCCCCCcEEE
Q psy3619         139 SDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDD-----------------------------CKSNPCLNGGICR  189 (418)
Q Consensus       139 ~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~-----------------------------C~~~~C~~~~~C~  189 (418)
                      +.||..++.  |++...+|+|.|++||+|..|+.++++                             |...+|.++++|+
T Consensus       104 s~pC~ngG~--C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~  181 (267)
T 4fbr_A          104 SIKSNDGGK--TLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTL  181 (267)
T ss_dssp             EEECSSTTS--EEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEE
T ss_pred             CCCCCCCCE--EecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEee
Confidence            555555554  555555555555555555555433322                             2334688888898


Q ss_pred             eCCCCeEEeCCCCcCCCCcCcCCCCCcCC-----------------------------CCCCCCeEeecCCCeEEEeCCC
Q psy3619         190 DGVAKFTCDCPPGWTGSRCEKDIGSCTNM-----------------------------PCQNDANCIDLFQDFFCVSSHS  240 (418)
Q Consensus       190 ~~~~~~~C~C~~G~~G~~C~~~~~~C~~~-----------------------------~c~~~~~C~~~~~~~~c~c~~~  240 (418)
                      +..++|+|.|++||+|..|+.++++|...                             +|.++++|++...+|.|.|+.+
T Consensus       182 dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~sy~CeCp~G  261 (267)
T 4fbr_A          182 SGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEGPIG  261 (267)
T ss_dssp             EEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred             CCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcceeecCCCC
Confidence            88889999999999999998887774322                             3555556666556666666666


Q ss_pred             CCC
Q psy3619         241 VQG  243 (418)
Q Consensus       241 ~~~  243 (418)
                      |++
T Consensus       262 F~G  264 (267)
T 4fbr_A          262 FRA  264 (267)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            654

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.83  E-value=1.5e-20  Score=153.84  Aligned_cols=111  Identities=40%  Similarity=1.057  Sum_probs=71.0

Q ss_pred             CCCCCCCCCCCeeecCC--CCeeeeCCCCccCCcccc------------CCCcCCCCCCCCCCcceee-------cCCCC
Q psy3619          98 DCASEPCQNGGSCVDML--DGFMCQCRPGFVGLQCEA------------DIDECLSDPCSPEGTDKCL-------DLDNK  156 (418)
Q Consensus        98 ~C~~~~C~~~~~C~~~~--g~~~C~C~~G~~g~~C~~------------~~~~C~~~~c~~~~~~~C~-------~~~~~  156 (418)
                      +|..+||.++++|+++.  ++|+|.|++||+|..|+.            ++++|..++|..++.  |+       +..++
T Consensus         2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~--C~~~~~~~~~~~~~   79 (143)
T 4d90_A            2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGT--CEISEAYRGDTFIG   79 (143)
T ss_dssp             -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCE--EEECCCEETTEECC
T ss_pred             cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCE--ecCCCccccCCCCC
Confidence            45555555555555543  345555555555555542            456666666666654  66       45567


Q ss_pred             eeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCc
Q psy3619         157 FQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       157 ~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      |.|.|++||+|..|+.++++|..++|.++++|++..++|+|.|++||+|+.|+.
T Consensus        80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred             eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence            777777777777776677777777777777777777777777777777777763

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.81  E-value=5.5e-20  Score=150.50  Aligned_cols=107  Identities=37%  Similarity=0.950  Sum_probs=95.3

Q ss_pred             CCCCCCceEeeCC--CCeEEecCCCCccCCCcc------------CCCCCCCCCCCCCCeee-------cCCCCeeeeCC
Q psy3619          64 PNDSIPGTCTDLV--GGFSCSCDLGFTGKHCQH------------LIDDCASEPCQNGGSCV-------DMLDGFMCQCR  122 (418)
Q Consensus        64 ~~c~~~~~C~~~~--g~~~C~C~~G~~g~~C~~------------~~~~C~~~~C~~~~~C~-------~~~g~~~C~C~  122 (418)
                      .+|.++|+|+++.  ++|+|.|++||+|..|+.            ++++|...||.++++|+       ++.++|+|.|+
T Consensus         6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~   85 (143)
T 4d90_A            6 NPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCP   85 (143)
T ss_dssp             CCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECC
T ss_pred             CcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECc
Confidence            5799999999875  689999999999999974            46789999999999999       67789999999


Q ss_pred             CCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCcccee
Q psy3619         123 PGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCET  172 (418)
Q Consensus       123 ~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~  172 (418)
                      +||+|..|+.++++|...+|..++.  |++..++|+|.|++||+|+.|+.
T Consensus        86 ~G~~G~~C~~~i~~C~~~~C~~~~~--C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           86 RGFNGIHCQHNINECEVEPCKNGGI--CTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             TTEESTTSCEECCTTTTCCSCTTCE--EEEETTEEEEECCTTCBSTTSCB
T ss_pred             CCCcCCCcccCCCcCCCCCCCCCCE--eECCCCCeEeECCCCCccCCcee
Confidence            9999999988999999999988775  99999999999999999999973

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=99.80  E-value=2.5e-19  Score=172.71  Aligned_cols=150  Identities=19%  Similarity=0.390  Sum_probs=108.6

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCE-EEEEEcCeeeccceecCCCcccCCCccEEecccC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGT-LTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPR  326 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~-~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~  326 (418)
                      +.+....+.+.+..+.+...+...+..+++||+||+|.|.|..+. ++|+||+....... .+ ...|++...||||+.+
T Consensus        56 l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~~~~-~~-~~~l~~~~~lyvGG~p  133 (410)
T 3asi_A           56 VELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQIT-AG-ARNLDLKSDLYIGGVA  133 (410)
T ss_dssp             EEEETTEEEEEEESSSCEEEEECCCSSCSCSSSCEEEEEEECTTCEEEEEETTEEEEEEC-TT-CCCCCBCSCEEESCCC
T ss_pred             EEEECCEEEEEEECCCCcEEEEeccCcEeCCCCeEEEEEEEcCCceEEEEECCEeceecc-CC-ccceecCCceEECccc
Confidence            334444444444444333333334778999999999999999764 89999997654432 22 3567888899999866


Q ss_pred             CCCCCC----c-cCCCceEEeeeEEecCeecChhhhhh----h-------cCCCCCCCCccCCceEE-eeCCcccccCce
Q psy3619         327 PDNIKA----Y-TEAGFEGKLTKVQIWNRALDFTNEIQ----K-------QVRDCRTEPVLHTGLVL-TWTGYDDINGGV  389 (418)
Q Consensus       327 ~~~~~~----~-~~~~F~GCi~~l~in~~~l~l~~~~~----~-------~~~~C~~~pc~~~g~c~-~~~~~~~~~g~~  389 (418)
                      ......    . ...+|+||||+|+||++.++|.+.+.    .       ....|...||.|+|.|. .|+.|       
T Consensus       134 ~~~~~~~~~~~~~~~~F~GCi~~l~ing~~~dl~~~~~~~~~~v~~gC~~~~~~C~~~pC~n~g~C~~~~~~~-------  206 (410)
T 3asi_A          134 KETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGF-------  206 (410)
T ss_dssp             GGGGGGSCTTCCCSSBCCEEEEEEESSSCCCCTTTTCSEEESSEEESCCCCSSCCCTTSSSTTCEEEECSSSE-------
T ss_pred             cchhhhhhhhcccccCchhheeheeeCCcccCchhhhhccCCccCCCCCCCCCCcccccCCCCCEecCCCCCc-------
Confidence            532111    1 23689999999999999999865431    1       13568889999999998 89999       


Q ss_pred             eeecCCCCCCccCCC-CCCCccccccc
Q psy3619         390 ERVVPSHCSQHICPP-GYTGPECDQLT  415 (418)
Q Consensus       390 ~~~~~~~c~~C~C~~-Gy~G~~Ce~~~  415 (418)
                               .|+|+. ||+|+.|++++
T Consensus       207 ---------~C~C~~~~~~G~~C~~~~  224 (410)
T 3asi_A          207 ---------SCDCSMTSFSGPLCNDPG  224 (410)
T ss_dssp             ---------EEECTTTSEESTTSCEEC
T ss_pred             ---------eEeccCCcccCCCCCCCc
Confidence                     999975 99999999765

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.80  E-value=6.3e-20  Score=169.59  Aligned_cols=156  Identities=35%  Similarity=0.811  Sum_probs=76.1

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCS  143 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~  143 (418)
                      ..|.++|.|++   .+.|.|++||+|..|+  .+.|.. +|.++++|++   .+.|.|++||+|..|+.  +.|. .+|.
T Consensus       153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~~-~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~  220 (324)
T 2ygq_A          153 GGCRNGGFCNE---RRICECPDGFHGPHCE--KALCTP-RCMNGGLCVT---PGFCICPPGFYGVNCDK--ANCS-TTCF  220 (324)
T ss_dssp             SCCCSSCEECT---TSCEECCTTEESSSSC--EESSSS-CCCTTCEECS---SCCEECCTTCBTTTTCB--CCCS-SCCC
T ss_pred             CCCCCCCEECC---CCeEECCCCCcCCCCC--CCCCCC-CCCCCCEEcC---CCEEeCCCCccCCCccc--CcCC-CCCC
Confidence            47999999986   4789999999999998  357864 7999999986   47899999999999974  4575 5677


Q ss_pred             CCCcceeecCCCCeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcCCCCCCC
Q psy3619         144 PEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQND  223 (418)
Q Consensus       144 ~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~c~~~  223 (418)
                      .++.  |++.   +.|.|++||+|..|+  ++.|. .+|.++++|..   .+.|.|++||+|..|+  +++|. .+|..+
T Consensus       221 ~~G~--C~~~---~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~  286 (324)
T 2ygq_A          221 NGGT--CFYP---GKCICPPGLEGEQCE--ISKCP-QPCRNGGKCIG---KSKCKCSKGYQGDLCS--KPVCE-PGCGAH  286 (324)
T ss_dssp             SSCC--BSCS---SCBCCCTTCCTTTTC----------------------------------------------------
T ss_pred             CCCe--eCCC---CeeeCCCCccCCCCC--cCcCC-CcCCCCCEECC---CCEEECCCCCcCCCCc--CCCCC-CCCCCC
Confidence            7665  8663   699999999999997  46675 68999999974   4689999999999997  45676 579999


Q ss_pred             CeEeecCCCeEEEeCCCCCCCcceE
Q psy3619         224 ANCIDLFQDFFCVSSHSVQGRRPLI  248 (418)
Q Consensus       224 ~~C~~~~~~~~c~c~~~~~~~~~~~  248 (418)
                      +.|++   .+.|.|.++|.|.....
T Consensus       287 g~C~~---~~~C~C~~G~~G~~C~~  308 (324)
T 2ygq_A          287 GTCHE---PNKCQCQEGWHGRHCNK  308 (324)
T ss_dssp             -------------------------
T ss_pred             CEECC---CCEeECCCCCcCCCCCC
Confidence            99986   57999999999876433

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.80  E-value=4.3e-20  Score=154.91  Aligned_cols=126  Identities=33%  Similarity=0.881  Sum_probs=101.6

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCC-CCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCC-C
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQ-NGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDP-C  142 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~-~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~-c  142 (418)
                      .|..+++|..   ..+|.|++||+|..|+  .++|.. .|. .++.|++   .|+|.|++||+|..|+    +|...+ |
T Consensus        39 ~c~~~g~C~~---~g~C~C~~G~~G~~C~--~~~C~~-~C~~~~g~C~~---~~~C~C~~G~~G~~C~----~C~~~~~C  105 (169)
T 2vj2_A           39 DFFGHYACDQ---NGNKTCMEGWMGPECN--RAICRQ-GCSPKHGSCKL---PGDCRCQYGWQGLYCD----KCIPHPGC  105 (169)
T ss_dssp             ETTEEEEECS---SCCEEECTTEESTTSC--EECCCT-TCCTTTEECSS---TTCCEECTTEESSSSC----EECCCTTC
T ss_pred             CcCCCCEeCC---CCeeECCCCCcCCCCC--CCCCCC-CCCCCCcccCC---CCeeECCCCCCCCCcc----cCCCCCCC
Confidence            4777888864   4579999999999997  456764 476 6678876   5899999999999995    355555 5


Q ss_pred             CCCCcceeecCCCCeeeecCCCCcCccceecCCCCCC-CCCCCCcEEEeC-CCCeEEeCCCCcCCCCcC
Q psy3619         143 SPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKS-NPCLNGGICRDG-VAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       143 ~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~-~~C~~~~~C~~~-~~~~~C~C~~G~~G~~C~  209 (418)
                      .++   .|+   +.|+|.|++||+|..|+.++++|.. .+|.++++|+++ .++|+|.|++||+|..|+
T Consensus       106 ~~g---~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          106 VHG---ICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE  168 (169)
T ss_dssp             SSE---ECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred             CCC---CcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence            532   476   5689999999999999878888875 789999999986 788999999999999986

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.76  E-value=3.9e-19  Score=164.27  Aligned_cols=125  Identities=37%  Similarity=0.927  Sum_probs=50.5

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCC
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSP  144 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~  144 (418)
                      .|.++|+|++   .+.|.|++||+|..|+  .+.|. .+|.++++|++   .++|.|++||+|..|+  +++|. .+|..
T Consensus       186 ~C~~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~  253 (324)
T 2ygq_A          186 RCMNGGLCVT---PGFCICPPGFYGVNCD--KANCS-TTCFNGGTCFY---PGKCICPPGLEGEQCE--ISKCP-QPCRN  253 (324)
T ss_dssp             CCCTTCEECS---SCCEECCTTCBTTTTC--BCCCS-SCCCSSCCBSC---SSCBCCCTTCCTTTTC-------------
T ss_pred             CCCCCCEEcC---CCEEeCCCCccCCCcc--cCcCC-CCCCCCCeeCC---CCeeeCCCCccCCCCC--cCcCC-CcCCC
Confidence            5888999986   4789999999999997  45685 67999999986   3789999999999996  46675 67777


Q ss_pred             CCcceeecCCCCeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCC
Q psy3619         145 EGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI  212 (418)
Q Consensus       145 ~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~  212 (418)
                      ++.  |+.   .+.|.|++||+|..|+  .+.|. .+|.++++|.+   .+.|.|++||+|..|+...
T Consensus       254 ~g~--C~~---~~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~  310 (324)
T 2ygq_A          254 GGK--CIG---KSKCKCSKGYQGDLCS--KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNKRY  310 (324)
T ss_dssp             --------------------------------------------------------------------
T ss_pred             CCE--ECC---CCEEECCCCCcCCCCc--CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCCCCC
Confidence            665  864   4799999999999997  45676 57999999986   4689999999999998543

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.75  E-value=2.9e-19  Score=149.86  Aligned_cols=149  Identities=28%  Similarity=0.734  Sum_probs=113.6

Q ss_pred             CCCeEEecCCCCccCCCccCCCCCCCC-CCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCC
Q psy3619          76 VGGFSCSCDLGFTGKHCQHLIDDCASE-PCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLD  154 (418)
Q Consensus        76 ~g~~~C~C~~G~~g~~C~~~~~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~  154 (418)
                      ...+.|.|++||+|..|+.   +|... +|..+++|+.   ..+|.|++||+|..|+.  +.|.. .|.. ..+.|++  
T Consensus        14 ~~~~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~--~~C~~-~C~~-~~g~C~~--   81 (169)
T 2vj2_A           14 EGRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNR--AICRQ-GCSP-KHGSCKL--   81 (169)
T ss_dssp             -------CCTTEETTTTCE---ECCCEEETTEEEEECS---SCCEEECTTEESTTSCE--ECCCT-TCCT-TTEECSS--
T ss_pred             ccCeeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCC--CCCCC-CCCC-CCcccCC--
Confidence            3568899999999999972   56653 5778889964   45899999999999974  44653 3431 1234765  


Q ss_pred             CCeeeecCCCCcCccceecCCCCCCCC-CCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcC-CCCCCCCeEeec-CC
Q psy3619         155 NKFQCECNVGYTGVMCETNIDDCKSNP-CLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTN-MPCQNDANCIDL-FQ  231 (418)
Q Consensus       155 ~~~~C~C~~G~~g~~C~~~~~~C~~~~-C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~-~~c~~~~~C~~~-~~  231 (418)
                       .+.|.|++||+|..|+    +|...+ |.+ ++|+   ++|+|.|++||+|..|+.++++|.. .+|.+++.|+++ .+
T Consensus        82 -~~~C~C~~G~~G~~C~----~C~~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~  152 (169)
T 2vj2_A           82 -PGDCRCQYGWQGLYCD----KCIPHPGCVH-GICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPD  152 (169)
T ss_dssp             -TTCCEECTTEESSSSC----EECCCTTCSS-EECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTT
T ss_pred             -CCeeECCCCCCCCCcc----cCCCCCCCCC-CCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCC
Confidence             5799999999999996    255555 765 4886   5689999999999999988999985 789999999996 88


Q ss_pred             CeEEEeCCCCCCCc
Q psy3619         232 DFFCVSSHSVQGRR  245 (418)
Q Consensus       232 ~~~c~c~~~~~~~~  245 (418)
                      +|+|.|+++|.|..
T Consensus       153 ~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          153 KYQCSCPEGYSGPN  166 (169)
T ss_dssp             CEEEECCTTCCSTT
T ss_pred             CcEeECCCCCcCcC
Confidence            99999999999864

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=99.75  E-value=1.1e-17  Score=181.86  Aligned_cols=127  Identities=20%  Similarity=0.378  Sum_probs=102.0

Q ss_pred             ccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCC-Cc--------cCCCceEEe
Q psy3619         272 EYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK-AY--------TEAGFEGKL  342 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~-~~--------~~~~F~GCi  342 (418)
                      +..+++||+||+|.|.|+++.++|+||+..... ..++....|++.+.||||+.+..... ..        ...+|+|||
T Consensus       508 s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~~~~-~~~~~~~~l~~~~~lylGG~p~~~~~~~~p~~~~~~~~~~gF~GCi  586 (1245)
T 3qcw_A          508 LQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPY-TAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCI  586 (1245)
T ss_dssp             CSSCCCSSCCEEEEEEEETTEEEEEETTEEEEE-ECSSSCCCCCCCSCEEESSCCSSCTTCCCCTTCHHHHTTCBCCEEE
T ss_pred             cccEecCCCEEEEEEEEecCEEEEEEccccccc-ccCCCcceeccCCceEEcccccccccccccccccccccccCceEEE
Confidence            567899999999999999999999999975433 34566677889999999886654321 11        247899999


Q ss_pred             eeEEecCeecChhhhhh-----hc--------CCCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCC-CCCC
Q psy3619         343 TKVQIWNRALDFTNEIQ-----KQ--------VRDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICP-PGYT  407 (418)
Q Consensus       343 ~~l~in~~~l~l~~~~~-----~~--------~~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~-~Gy~  407 (418)
                      |+|.||++.++|...+.     ++        ...|.++||.|+|.|. .|+.|                .|+|+ +||+
T Consensus       587 r~l~ing~~~dl~~~~~~~~~~gv~~gC~~~~~~~C~~~pC~ngg~C~~~~~~~----------------~C~C~~~g~~  650 (1245)
T 3qcw_A          587 RDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRY----------------VCDCSGTGYL  650 (1245)
T ss_dssp             EEEEETTEEECHHHHTTTTTCTTEESSCCCCSSCGGGSCCCCTTCEEEECSSSE----------------EEECTTTTEE
T ss_pred             EEEEECCEEcCchhhhhhhccccccccccccCCCCCCccCCCCCCEEeCCCCCe----------------EEECCCCCcc
Confidence            99999999999965431     11        2467788999999998 89999                99998 8999


Q ss_pred             Cccccccc
Q psy3619         408 GPECDQLT  415 (418)
Q Consensus       408 G~~Ce~~~  415 (418)
                      |++|++++
T Consensus       651 G~~C~~~~  658 (1245)
T 3qcw_A          651 GRSCEREA  658 (1245)
T ss_dssp             STTSCEEC
T ss_pred             cccCcccc
Confidence            99999754

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.73  E-value=3.6e-18  Score=171.29  Aligned_cols=158  Identities=31%  Similarity=0.743  Sum_probs=129.4

Q ss_pred             CCCCCCceEeeCCCCeE---EecCCCCccCCCccCC--------CCCCCC----CCCCCCeeecCCCCeeeeCC----CC
Q psy3619          64 PNDSIPGTCTDLVGGFS---CSCDLGFTGKHCQHLI--------DDCASE----PCQNGGSCVDMLDGFMCQCR----PG  124 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~---C~C~~G~~g~~C~~~~--------~~C~~~----~C~~~~~C~~~~g~~~C~C~----~G  124 (418)
                      .+|.+.+.|.+..|.|.   |.|++||+|..|+.++        ++|...    +|.++++|++    +.|.|+    +|
T Consensus       440 ~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~G  515 (690)
T 3fcs_B          440 QAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGK  515 (690)
T ss_dssp             TCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCC
T ss_pred             CCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCC
Confidence            45777777876677777   9999999999998665        678763    4999999984    689999    99


Q ss_pred             ccCCccccCCCcCCC---CCCCCCCcceeecCCCCeeeecCCCCcCccce--ecCCCCCC---CCCCCCcEEEeCCCCeE
Q psy3619         125 FVGLQCEADIDECLS---DPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE--TNIDDCKS---NPCLNGGICRDGVAKFT  196 (418)
Q Consensus       125 ~~g~~C~~~~~~C~~---~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~--~~~~~C~~---~~C~~~~~C~~~~~~~~  196 (418)
                      |+|..|+.++++|..   .+|..++.  |.+    +.|.|++||+|..|+  .+++.|..   .+|.++|+|.+.    .
T Consensus       516 y~G~~Ce~~~~~C~~~~~~~C~~~G~--C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g----~  585 (690)
T 3fcs_B          516 ITGKYCECDDFSCVRYKGEMCSGHGQ--CSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----S  585 (690)
T ss_dssp             CBSTTSCBCSSCCCBSSSSBGGGSEE--EET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT----E
T ss_pred             eeCCCcCcccCcCcCCCCCCCCCCCE--ecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC----E
Confidence            999999888888975   35665554  876    699999999999998  45788875   679999999763    7


Q ss_pred             EeC-CCCcCCCCcCcCCCCCcCCCCCCCCeEeecCCCeEEEeCCCCCCCc
Q psy3619         197 CDC-PPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGRR  245 (418)
Q Consensus       197 C~C-~~G~~G~~C~~~~~~C~~~~c~~~~~C~~~~~~~~c~c~~~~~~~~  245 (418)
                      |.| ++||+|..|+. ...| +.+|.+++.|++        |..+|+|..
T Consensus       586 C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~--------C~~g~tG~~  625 (690)
T 3fcs_B          586 CVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE--------CKKFDRGAL  625 (690)
T ss_dssp             EECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT--------TTTTCCSSS
T ss_pred             EECCCCCccCCCcCc-CCCC-CCCCCCCCCccc--------CCCCCccCC
Confidence            999 99999999984 2456 468999999986        888888873

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=99.73  E-value=1.1e-17  Score=181.65  Aligned_cols=135  Identities=21%  Similarity=0.431  Sum_probs=102.7

Q ss_pred             cceEEeeeccccccCCCceEEEEEEeCC-EEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCC-----ccCCC
Q psy3619         264 QDAFLAFHEYATINDGQWHHVAIVWTQG-TLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKA-----YTEAG  337 (418)
Q Consensus       264 ~~~~~~~~s~~~l~dg~WH~v~v~~~~~-~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~-----~~~~~  337 (418)
                      +...+.+.+...|+||+||+|.|.|..+ .+.|+||+......  ......|++.++||||+.+......     ....+
T Consensus       904 g~~~~~~~s~~~vnDg~WH~V~~~~~~~~~~~L~VD~~~~~~~--~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~~  981 (1245)
T 3qcw_A          904 GANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQI--TAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEG  981 (1245)
T ss_dssp             CCEEEECCCSSCSCSSSCEEEEEEECTTCEEEEEETTEEEEEE--CCCCCCCCEEEEEEESCCCGGGGGGCCTTCCCSSB
T ss_pred             CcEEEEecCcccccCCCeEEEEEEEeCCeeEEEEECCEeeeec--cCCcceeccCCCeEECcccccchhhhcccccccCC
Confidence            3333444578899999999999999975 57899999765432  2334567888999999865432111     12368


Q ss_pred             ceEEeeeEEecCeecChhhhhhh-----------cCCCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCC-C
Q psy3619         338 FEGKLTKVQIWNRALDFTNEIQK-----------QVRDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICP-P  404 (418)
Q Consensus       338 F~GCi~~l~in~~~l~l~~~~~~-----------~~~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~-~  404 (418)
                      |+||||+|+||++.+++...+..           ..+.|...||.|+|.|. .|+.|                .|+|+ +
T Consensus       982 F~GCi~~l~ing~~~~l~~~~~~~~~~v~~gC~~~~~~C~~~pC~ngG~C~~~~~~~----------------~C~C~~~ 1045 (1245)
T 3qcw_A          982 FQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGF----------------SCDCSMT 1045 (1245)
T ss_dssp             CCEEEEEEEETTBCCCTTTTCSEEESCEEESSSCCCCCCCTTSSSSSCEEEEETTEE----------------EEECTTS
T ss_pred             cEEEeeeEEECCEEcccccchhccccceeeeeecccCceECCcCCCCCEeCCCCCCC----------------EEECCCC
Confidence            99999999999999988554311           12578899999999998 89999                99998 7


Q ss_pred             CCCCcccccccc
Q psy3619         405 GYTGPECDQLTV  416 (418)
Q Consensus       405 Gy~G~~Ce~~~~  416 (418)
                      ||+|++|++++.
T Consensus      1046 g~~G~~C~~~~~ 1057 (1245)
T 3qcw_A         1046 SFSGPLCNDPGT 1057 (1245)
T ss_dssp             SCBSTTSCBCCC
T ss_pred             CCCCCCccCCCc
Confidence            999999998653

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.73  E-value=9.5e-18  Score=165.77  Aligned_cols=122  Identities=31%  Similarity=0.752  Sum_probs=75.5

Q ss_pred             CCCCCCCCCCCCCCeeecCCC-Ceee-eCCCCccC--CccccCCCcCCCCC--CCCCC-cceeecCCCCeeee-cCCCCc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLD-GFMC-QCRPGFVG--LQCEADIDECLSDP--CSPEG-TDKCLDLDNKFQCE-CNVGYT  166 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g-~~~C-~C~~G~~g--~~C~~~~~~C~~~~--c~~~~-~~~C~~~~~~~~C~-C~~G~~  166 (418)
                      ++++|+.+||.++++|+++.+ +|+| .|++||+|  ..|+ ++++|..++  |..++ ...|+++.++|+|. |++||+
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~   80 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR   80 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence            455666566666666666553 3666 56666664  5565 566665555  54443 01266666666665 666666


Q ss_pred             Cccce--------------ecCCCCCC--CCCCCCcEEEeCC----CCeEEeCCCCcCC--CCcCc--CCCCCcC
Q psy3619         167 GVMCE--------------TNIDDCKS--NPCLNGGICRDGV----AKFTCDCPPGWTG--SRCEK--DIGSCTN  217 (418)
Q Consensus       167 g~~C~--------------~~~~~C~~--~~C~~~~~C~~~~----~~~~C~C~~G~~G--~~C~~--~~~~C~~  217 (418)
                      |..|+              .++++|..  ++|.++++|+++.    ++|+|.|++||+|  ..|++  ++++|..
T Consensus        81 G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~  155 (634)
T 1yo8_A           81 GNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPN  155 (634)
T ss_dssp             ECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCS
T ss_pred             cCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccccC
Confidence            55432              26778874  4788888888877    7888888888876  67863  5677753

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.71  E-value=2.5e-17  Score=162.84  Aligned_cols=129  Identities=32%  Similarity=0.809  Sum_probs=105.3

Q ss_pred             CCCCCCceEeeCCCC-eEE-ecCCCCcc--CCCccCCCCCCCCC--CCCCC---eeecCCCCeeee-CCCCccCCccc--
Q psy3619          64 PNDSIPGTCTDLVGG-FSC-SCDLGFTG--KHCQHLIDDCASEP--CQNGG---SCVDMLDGFMCQ-CRPGFVGLQCE--  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~-~~C-~C~~G~~g--~~C~~~~~~C~~~~--C~~~~---~C~~~~g~~~C~-C~~G~~g~~C~--  131 (418)
                      .+|.++++|+++.++ |+| .|++||+|  ..|+ ++++|+..|  |.+++   +|+++.++|+|. |++||+|..|+  
T Consensus         9 nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~   87 (634)
T 1yo8_A            9 NPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGV   87 (634)
T ss_dssp             CCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEES
T ss_pred             CCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccc
Confidence            579999999999854 999 99999998  7998 899999888  99998   999999999998 99999987753  


Q ss_pred             ------------cCCCcCCC--CCCCCCCcceeecCC----CCeeeecCCCCcC--cccee--cCCCCCC--CCCCCCcE
Q psy3619         132 ------------ADIDECLS--DPCSPEGTDKCLDLD----NKFQCECNVGYTG--VMCET--NIDDCKS--NPCLNGGI  187 (418)
Q Consensus       132 ------------~~~~~C~~--~~c~~~~~~~C~~~~----~~~~C~C~~G~~g--~~C~~--~~~~C~~--~~C~~~~~  187 (418)
                                  .++++|..  .+|..++  .|++..    ++|+|.|++||+|  ..|+.  ++++|..  .+|..+  
T Consensus        88 g~~~~~~dg~~C~dideC~~~~~pC~~~~--~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~~~~~C~~~--  163 (634)
T 1yo8_A           88 GLEAAKTEKQVCEPENPCKDKTHNCHKHA--ECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATN--  163 (634)
T ss_dssp             SSHHHHSCCCCEEECCTTTTTCCCCCTTE--EEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCSSCCTTTTT--
T ss_pred             cccccccCCCcccccccccCCCcccccCc--cccccccccccceeeeccCCccccCcccccccCcccccCCCCcccCC--
Confidence                        37899985  4776655  499998    9999999999997  68974  6778853  345422  


Q ss_pred             EEeCCCCeEEe---CCCC
Q psy3619         188 CRDGVAKFTCD---CPPG  202 (418)
Q Consensus       188 C~~~~~~~~C~---C~~G  202 (418)
                           ++|.|.   |+.+
T Consensus       164 -----~~y~C~~dnC~~~  176 (634)
T 1yo8_A          164 -----ATYHCIKDNCPHL  176 (634)
T ss_dssp             -----CSSSCSCCSSTTS
T ss_pred             -----CCccccccccccc
Confidence                 355565   6654

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.70  E-value=1.2e-17  Score=136.36  Aligned_cols=110  Identities=24%  Similarity=0.725  Sum_probs=79.4

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCcc---------CCCccCCCCCCCC---CCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTG---------KHCQHLIDDCASE---PCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g---------~~C~~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      ..|.++++|+++   |+|.|++||+|         ..|+ ++++|+..   +|.++++|+++.++|+|.|++||+|..+.
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~   82 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA   82 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred             CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence            469999999984   89999999998         5897 89999875   89999999999999999999999987553


Q ss_pred             cCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCccceecCCCCC--CCCCCCCcEEEeCCCCeEEeCCCCcCCC
Q psy3619         132 ADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCK--SNPCLNGGICRDGVAKFTCDCPPGWTGS  206 (418)
Q Consensus       132 ~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~G~  206 (418)
                      ..+                .            ...+..|+ ++++|.  .++|.++++|+++.++|+|.|++||+|.
T Consensus        83 ~~~----------------~------------~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~  130 (143)
T 2bou_A           83 KTF----------------K------------NESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPR  130 (143)
T ss_dssp             SCB----------------S------------SGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred             ccc----------------c------------cCCCCCcC-CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence            110                0            01223343 455554  3566666666666666666666666644

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.68  E-value=9.1e-21  Score=166.36  Aligned_cols=155  Identities=15%  Similarity=0.178  Sum_probs=123.6

Q ss_pred             eEeeCCCCeEEecCCC---CccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCc------CCCCC
Q psy3619          71 TCTDLVGGFSCSCDLG---FTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDE------CLSDP  141 (418)
Q Consensus        71 ~C~~~~g~~~C~C~~G---~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~------C~~~~  141 (418)
                      .++|..|+|++.|.+|   +.|.++++++..+.. +|.++++|++..++|+|.|++||+|..|+.++++      |...|
T Consensus         5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~p   83 (267)
T 4fbr_A            5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAP   83 (267)
T ss_dssp             EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSC
T ss_pred             eEeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCc
Confidence            4678889999999999   568888877766654 7899999999999999999999999999999999      45555


Q ss_pred             CCCCCcceeecCCCCeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCc-----
Q psy3619         142 CSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCT-----  216 (418)
Q Consensus       142 c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~-----  216 (418)
                      |.+++           .|     |.|..|+ ..++|...||.++++|++...+|+|.|+.||+|..|+.++++|.     
T Consensus        84 C~ngg-----------tc-----~~G~~c~-~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c  146 (267)
T 4fbr_A           84 WQPGG-----------VW-----VLGARDK-QNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGG  146 (267)
T ss_dssp             EEEEE-----------EE-----ECCCCSS-CCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSS
T ss_pred             ccCCC-----------ee-----eccCccc-cccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCc
Confidence            54433           22     5678887 45689999999999999999999999999999999998777733     


Q ss_pred             -C-----------------------CCCCCCCeEeecCCCeEEEeCCCCCC
Q psy3619         217 -N-----------------------MPCQNDANCIDLFQDFFCVSSHSVQG  243 (418)
Q Consensus       217 -~-----------------------~~c~~~~~C~~~~~~~~c~c~~~~~~  243 (418)
                       .                       .+|.++++|++..++|+|.|+++|++
T Consensus       147 ~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G  197 (267)
T 4fbr_A          147 SAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG  197 (267)
T ss_dssp             TTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             CCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence             2                       24556666666666677777766654

>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A

Probab=99.68  E-value=3.3e-16  Score=134.28  Aligned_cols=117  Identities=15%  Similarity=0.167  Sum_probs=87.0

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+++..+  .....+.+..+++||+||+|.|.|.++.++|+||+........++....|++.+.||||+.+.
T Consensus        67 l~L~~G~l~~~~~~G--~~~~~l~s~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~  144 (191)
T 3v64_A           67 LAIVDGHLQLSYDLG--SQPVVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQK  144 (191)
T ss_dssp             EEEETTEEEEEEESS--SCCEEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSS
T ss_pred             EEEECCEEEEEEECC--CccEEEecCccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCc
Confidence            344444444444443  444556677899999999999999999999999998666665667777888899999988665


Q ss_pred             CCCCC----ccCCCceEEeeeEEecCeecChhhhhhh--cCCCCC
Q psy3619         328 DNIKA----YTEAGFEGKLTKVQIWNRALDFTNEIQK--QVRDCR  366 (418)
Q Consensus       328 ~~~~~----~~~~~F~GCi~~l~in~~~l~l~~~~~~--~~~~C~  366 (418)
                      .....    ....+|+|||++|+||++.++|.+.+..  ...+|.
T Consensus       145 ~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~~~~~~~~~~gC~  189 (191)
T 3v64_A          145 LPVGQALPKAYGTGFVGCLRDVVVGHRQLHLLEDAVTKPELRPCP  189 (191)
T ss_dssp             CCSSCCSCGGGTSBCEEEEEEEEETTEECCTTTTCSBCCCCCCCS
T ss_pred             ccccccccccccCCceEEeeEEEECCEEccchhHHhcCCCCCCCC
Confidence            43221    2347899999999999999999877643  455664

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.67  E-value=5e-18  Score=141.65  Aligned_cols=124  Identities=23%  Similarity=0.601  Sum_probs=95.6

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCc----cCCCccCCCC--CCCCC--C--CCCCeeecCCC----CeeeeCCCCcc-CC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFT----GKHCQHLIDD--CASEP--C--QNGGSCVDMLD----GFMCQCRPGFV-GL  128 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~--C~~~~--C--~~~~~C~~~~g----~~~C~C~~G~~-g~  128 (418)
                      .+|. +++|+|+.++|+|.|++||+    |..|+ ++++  |...+  |  ..+++|+++.+    +|+|.|++||. |.
T Consensus        10 ~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~   87 (162)
T 1uzk_A           10 TTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT   87 (162)
T ss_dssp             TSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETT
T ss_pred             CCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC
Confidence            3575 68999999999999999999    88998 7887  87533  4  35789999877    79999999998 66


Q ss_pred             ccccCCCcCCCCCCCCCCcceee-cCCCCeeeecCC--CCcCc---cceecCCCCCC--CCCCCCcEEEeCCCCeEEeCC
Q psy3619         129 QCEADIDECLSDPCSPEGTDKCL-DLDNKFQCECNV--GYTGV---MCETNIDDCKS--NPCLNGGICRDGVAKFTCDCP  200 (418)
Q Consensus       129 ~C~~~~~~C~~~~c~~~~~~~C~-~~~~~~~C~C~~--G~~g~---~C~~~~~~C~~--~~C~~~~~C~~~~~~~~C~C~  200 (418)
                      .|+.                 |. +..++|.|.|++  ||++.   .+..++++|..  ++|.+ ++|+++.++|+|.|+
T Consensus        88 ~C~~-----------------C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~  149 (162)
T 1uzk_A           88 PCEM-----------------CPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCP  149 (162)
T ss_dssp             TTEE-----------------CCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECC
T ss_pred             Cccc-----------------CCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCC
Confidence            6641                 22 245689999998  99875   23358999975  45975 799999999999999


Q ss_pred             CCcCCCC
Q psy3619         201 PGWTGSR  207 (418)
Q Consensus       201 ~G~~G~~  207 (418)
                      +||+|..
T Consensus       150 ~Gy~g~~  156 (162)
T 1uzk_A          150 TGYYLNE  156 (162)
T ss_dssp             TTCCBCT
T ss_pred             CCccCCC
Confidence            9998764

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.66  E-value=5e-18  Score=141.64  Aligned_cols=134  Identities=27%  Similarity=0.678  Sum_probs=102.4

Q ss_pred             CCCCCC-CCCCCCCCeeecCCCCeeeeCCCCcc----CCccccCCCc--CCCCC--CCCCCcceeecCCC----Ceeeec
Q psy3619          95 LIDDCA-SEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDE--CLSDP--CSPEGTDKCLDLDN----KFQCEC  161 (418)
Q Consensus        95 ~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~--C~~~~--c~~~~~~~C~~~~~----~~~C~C  161 (418)
                      |||+|+ .+||. +++|+++.++|+|.|++||+    |..|+ ++++  |...+  |.....+.|++..+    +|.|.|
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C   79 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC   79 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence            799998 48896 79999999999999999998    88998 7776  86533  32222345888776    899999


Q ss_pred             CCCCc-CccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCC--CcCCC---CcCcCCCCCcCC--CCCCCCeEeecCCCe
Q psy3619         162 NVGYT-GVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPP--GWTGS---RCEKDIGSCTNM--PCQNDANCIDLFQDF  233 (418)
Q Consensus       162 ~~G~~-g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~--G~~G~---~C~~~~~~C~~~--~c~~~~~C~~~~~~~  233 (418)
                      ++||. |..|+.         |..     +..++|+|.|++  ||+|.   .+.++|+||...  +|.+ +.|+++.++|
T Consensus        80 ~~G~~~~~~C~~---------C~~-----~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy  144 (162)
T 1uzk_A           80 SLGKAWGTPCEM---------CPA-----VNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSF  144 (162)
T ss_dssp             TTCCEETTTTEE---------CCC-----TTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCE
T ss_pred             CCCCCcCCCccc---------CCC-----CCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCE
Confidence            99998 666651         221     245689999998  99875   233599999864  5875 7999999999


Q ss_pred             EEEeCCCCCCCc
Q psy3619         234 FCVSSHSVQGRR  245 (418)
Q Consensus       234 ~c~c~~~~~~~~  245 (418)
                      +|.|+.||.+..
T Consensus       145 ~C~C~~Gy~g~~  156 (162)
T 1uzk_A          145 QCRCPTGYYLNE  156 (162)
T ss_dssp             EEECCTTCCBCT
T ss_pred             EeeCCCCccCCC
Confidence            999999998754

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.66  E-value=1e-16  Score=130.76  Aligned_cols=111  Identities=25%  Similarity=0.709  Sum_probs=85.5

Q ss_pred             CCCCCCCeeecCCCCeeeeCCCCccC---------CccccCCCcCCCC---CCCCCCcceeecCCCCeeeecCCCCcCcc
Q psy3619         102 EPCQNGGSCVDMLDGFMCQCRPGFVG---------LQCEADIDECLSD---PCSPEGTDKCLDLDNKFQCECNVGYTGVM  169 (418)
Q Consensus       102 ~~C~~~~~C~~~~g~~~C~C~~G~~g---------~~C~~~~~~C~~~---~c~~~~~~~C~~~~~~~~C~C~~G~~g~~  169 (418)
                      .+|.++++|+++   |+|.|++||+|         ..|+ ++++|...   +|..++  .|++..++|+|.|++||+|..
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~--~C~n~~g~y~C~C~~Gy~g~~   80 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFS--DCWNTEGSYDCVCSPGYEPVS   80 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTE--EEEECSSCEEEEECTTEEETT
T ss_pred             CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCC--EEEcCCCCeEeECCCCcccCc
Confidence            579999999974   89999999998         4675 77888764   565544  488888888888888887776


Q ss_pred             ceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcC--CCCCCCCeEeecCCCeEEEeCCCCCCCc
Q psy3619         170 CETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTN--MPCQNDANCIDLFQDFFCVSSHSVQGRR  245 (418)
Q Consensus       170 C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~--~~c~~~~~C~~~~~~~~c~c~~~~~~~~  245 (418)
                      ++...                          ....+..|+ ++++|..  .+|.+++.|+++.++|+|.|+.+|.+..
T Consensus        81 ~~~~~--------------------------~~~~~~~C~-dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~  131 (143)
T 2bou_A           81 GAKTF--------------------------KNESENTCQ-DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH  131 (143)
T ss_dssp             CCSCB--------------------------SSGGGCCEE-ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred             Ccccc--------------------------ccCCCCCcC-CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence            54110                          012345776 8899984  7899999999999999999999999865

>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A

Probab=99.64  E-value=1.1e-15  Score=132.51  Aligned_cols=109  Identities=16%  Similarity=0.130  Sum_probs=81.3

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+.+..+  .....+.+..+++||+||+|.|.|+++.++|+||+.......+++....|+..+.||||+.+.
T Consensus        80 l~L~~G~l~~~~~~G--~g~~~v~s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~  157 (204)
T 1pz7_A           80 LAIVDGFVQMMYDLG--SKPVVLRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMER  157 (204)
T ss_dssp             EEEETTEEEEEEESS--SCCEEEEEEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSC
T ss_pred             EEEECCEEEEEEECC--CCeEEEECCcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCC
Confidence            334444444444433  444455677899999999999999999999999997666555566677788889999998765


Q ss_pred             CCCC-Cc---cCCCceEEeeeEEecCeecChhhhh
Q psy3619         328 DNIK-AY---TEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       328 ~~~~-~~---~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      .... .+   ...+|+|||++|+||++.++|.+.+
T Consensus       158 ~~~~~~~~~~~~~~F~GCi~~l~in~~~~dl~~~~  192 (204)
T 1pz7_A          158 LSVAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDA  192 (204)
T ss_dssp             CSTTTTSCGGGGSBCEEEEEEEEETTEECCTTTSC
T ss_pred             cccccccccccCCCceEEEEEEEECCEEccchhhh
Confidence            4321 11   2478999999999999999997654

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=99.64  E-value=1.4e-15  Score=146.48  Aligned_cols=177  Identities=21%  Similarity=0.362  Sum_probs=105.1

Q ss_pred             cceecCCCCCCCCCCCCcEEEeCCCCeEEeCCC-CcCCCCcCcCCCCCcCC----------CCCC--CCeEeecCCCeEE
Q psy3619         169 MCETNIDDCKSNPCLNGGICRDGVAKFTCDCPP-GWTGSRCEKDIGSCTNM----------PCQN--DANCIDLFQDFFC  235 (418)
Q Consensus       169 ~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~~G~~C~~~~~~C~~~----------~c~~--~~~C~~~~~~~~c  235 (418)
                      .|....+.|..+||.++++|.+.+.+|.|.|+. +|.|+.|+.......-.          +-..  ...-....-.|+-
T Consensus       180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~i~l~frT  259 (410)
T 3asi_A          180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFST  259 (410)
T ss_dssp             SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEECCEEEEEEEEEEEEEECCTTCCCCBSEEEEEEEEEC
T ss_pred             CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCCcccccccCCCceEEEecCCCCCccceeeEEEEEEEe
Confidence            354345788899999999999999999999996 99999998543221100          0000  0000000000000


Q ss_pred             EeC-------CCCCCCcceE--EecccCcEEEeccCccceEEeeec-cccccCCCceEEEEEEeCCEEEEEEcCeeeccc
Q psy3619         236 VSS-------HSVQGRRPLI--QAHSSGVQVSLFPELQDAFLAFHE-YATINDGQWHHVAIVWTQGTLTLITEGLIAGKV  305 (418)
Q Consensus       236 ~c~-------~~~~~~~~~~--~~~~~~v~l~~~~~~~~~~~~~~s-~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~  305 (418)
                      .-+       ....+...++  .+....+.+.+..+  ...+.+.+ ...++||+||+|.|.|.++.++|+||+......
T Consensus       260 ~~~~GlLl~~~~~~~~~~~l~l~L~~G~l~~~~~~g--~~~~~~~~~~~~l~DG~wH~V~v~r~~~~~~L~VD~~~~~~~  337 (410)
T 3asi_A          260 VQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVG--TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIER  337 (410)
T ss_dssp             CCSEEEEEEEEECTTCCCEEEEEEETTEEEEEEESS--SSCEEEECCSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEE
T ss_pred             CCCCEEEEEEecCCCCCceEEEEEeCCEEEEEEECC--CCceEEecCccCcCCCCeEEEEEEEECCEEEEEECCcceecc
Confidence            000       0000111122  22222222233222  22233333 478999999999999999999999999765543


Q ss_pred             eecCC-CcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeec-Ch
Q psy3619         306 ENYGS-GKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRAL-DF  354 (418)
Q Consensus       306 ~~~~~-~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l-~l  354 (418)
                      ...+. ...++....||||+.+..       .+|+|||++|+||++.+ ++
T Consensus       338 ~~~g~~~~~~~~~~~lylGG~p~~-------~~F~GCi~~v~ing~~~l~~  381 (410)
T 3asi_A          338 YPAGRQLTIFNSQATIIIGGKEQG-------QPFQGQLSGLYYNGLKVLNM  381 (410)
T ss_dssp             CCSSCCCCCBCCEEEEEESSTTTT-------CCCCEEEEEEEETTBCHHHH
T ss_pred             cCCCccceeeeccceEEECCcccC-------CCCEEEEEEEEECCHHHHHH
Confidence            32332 234667789999986542       68999999999999864 44

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.63  E-value=2.3e-16  Score=117.36  Aligned_cols=87  Identities=28%  Similarity=0.717  Sum_probs=69.7

Q ss_pred             CeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCccce-ecCCCCCCCCCCCCcEEEeCC--
Q psy3619         116 GFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE-TNIDDCKSNPCLNGGICRDGV--  192 (418)
Q Consensus       116 ~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~-~~~~~C~~~~C~~~~~C~~~~--  192 (418)
                      +|+|.|.+||+|..|  ++++|...|        |++..++|.|.|++||+  .|+ .++++|..+||.++|+|++..  
T Consensus         1 sy~C~C~~g~~g~~c--~~~~c~~~p--------C~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~   68 (91)
T 1tpg_A            1 SYQVICRDEKTQMIY--QQHQSWLRP--------VLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYF   68 (91)
T ss_dssp             CCCCCCBCSSSCCBC--CSSCEEEEE--------CSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSS
T ss_pred             CeeeECCCCCcCCeE--CCCcccCCc--------cccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCC
Confidence            578888888888887  467776554        44556788899999997  786 567888888899999998876  


Q ss_pred             CCeEEeCCCCcCCCCcCcCCCC
Q psy3619         193 AKFTCDCPPGWTGSRCEKDIGS  214 (418)
Q Consensus       193 ~~~~C~C~~G~~G~~C~~~~~~  214 (418)
                      ++|.|.|++||+|..|+.+++|
T Consensus        69 ~~~~C~C~~G~~G~~Ce~~ide   90 (91)
T 1tpg_A           69 SDFVCQCPEGFAGKSCEIDTRA   90 (91)
T ss_dssp             SCEEEECCTTCBSSSCCBCSSC
T ss_pred             CCeEeECCCCCcCCcCCcCCCC
Confidence            8899999999999999877764

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.63  E-value=3.9e-16  Score=156.68  Aligned_cols=123  Identities=30%  Similarity=0.599  Sum_probs=103.5

Q ss_pred             CCCCCCceEeeCCCCeEEecC----CCCccCCCccCCCCCCC---CCCCCCCeeecCCCCeeeeCCCCccCCccc--cCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCD----LGFTGKHCQHLIDDCAS---EPCQNGGSCVDMLDGFMCQCRPGFVGLQCE--ADI  134 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~----~G~~g~~C~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~--~~~  134 (418)
                      ..|.++|+|++    +.|.|+    +||+|..|+.++++|..   .+|.+++.|++    +.|.|++||+|..|+  .++
T Consensus       493 ~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~  564 (690)
T 3fcs_B          493 PVCSQRGECLC----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRT  564 (690)
T ss_dssp             CGGGGSEEECS----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCC
T ss_pred             CCCCCCCEEEC----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCC
Confidence            45999999984    689999    99999999878889985   47999999986    799999999999998  567


Q ss_pred             CcCCC---CCCCCCCcceeecCCCCeeeec-CCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCc
Q psy3619         135 DECLS---DPCSPEGTDKCLDLDNKFQCEC-NVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       135 ~~C~~---~~c~~~~~~~C~~~~~~~~C~C-~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      ++|..   .+|..++.  |++.    .|.| ++||+|..|+. ...| .++|.+++.|++        |..+|+|..|+.
T Consensus       565 ~~C~~~~g~~C~~~G~--C~~g----~C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~--------C~~g~tG~~C~~  628 (690)
T 3fcs_B          565 DTCMSSNGLLCSGRGK--CECG----SCVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE--------CKKFDRGALHDE  628 (690)
T ss_dssp             TTTBCTTSSBTSSSCE--EETT----EEECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT--------TTTTCCSSSSSS
T ss_pred             CcccCCCCCCCCCCCE--EeCC----EEECCCCCccCCCcCc-CCCC-CCCCCCCCCccc--------CCCCCccCCCCc
Confidence            88975   56776665  8752    9999 99999999983 2456 478999999975        999999999863

>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}

Probab=99.62  E-value=4.3e-15  Score=127.11  Aligned_cols=109  Identities=15%  Similarity=0.079  Sum_probs=81.5

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+.+.  .+.....+.+..+++||+||+|.|.|.++.++|+||+........++....|++...||||+.+.
T Consensus        67 l~L~~G~l~~~~~--~G~g~~~l~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~  144 (189)
T 3pve_A           67 LALHNRHLEFRYD--LGKGAAIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPD  144 (189)
T ss_dssp             EEEETTEEEEEEE--SSSCEEEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSC
T ss_pred             EEEECCEEEEEEe--cCCCCEEEEcCcccCCCCEEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCc
Confidence            3344444444444  34445566788899999999999999999999999997665555566677888889999998665


Q ss_pred             CCCC---CccCCCceEEeeeEEecCeecChhhhh
Q psy3619         328 DNIK---AYTEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       328 ~~~~---~~~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      ....   .....+|+|||++|+||++.|++.+.+
T Consensus       145 ~~~~~~~~~~~~~F~GCi~~v~ing~~l~~~~~~  178 (189)
T 3pve_A          145 FSKLARGAAVASGFDGAIQLVSLRGHQLLTQEHV  178 (189)
T ss_dssp             GGGSCGGGCCCSBCEEEEEEEEETTEECCBGGGE
T ss_pred             hhhcccccccCCCCcEEceEEEECCEEccChhhc
Confidence            4321   123478999999999999999876544

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.61  E-value=1.8e-16  Score=124.40  Aligned_cols=100  Identities=28%  Similarity=0.823  Sum_probs=76.5

Q ss_pred             CCCCCCCCCCCCCCeeecC-CCCeeeeCCCCccCCccccCCCc----CCCCCCCCCCcceeecCCCCeeeecCCCCc---
Q psy3619          95 LIDDCASEPCQNGGSCVDM-LDGFMCQCRPGFVGLQCEADIDE----CLSDPCSPEGTDKCLDLDNKFQCECNVGYT---  166 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~g~~C~~~~~~----C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~---  166 (418)
                      |+|+|+.+||.+  +|+++ .++|+|.|++||+|..+  ++++    |..++|.    +.|++ .++|.|.|++||+   
T Consensus         3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~--~~~~C~~~C~~~~C~----~~C~~-~~~y~C~C~~Gy~~~~   73 (118)
T 1dx5_I            3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH--EPHRCQMFCNQTACP----ADCDP-NTQASCECPEGYILDD   73 (118)
T ss_dssp             CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT--EEEEEEECCCSSEEE----CEECT-TSTTCEECCTTEEEET
T ss_pred             ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC--CCCccccccCCCCCC----CcccC-CCCeEeECCCCccCCC
Confidence            788898888873  89998 88899999999988744  2233    3444443    24777 4788888888888   


Q ss_pred             CccceecCCCCCC-CCCCCCcEEEeCCCCeEEeCCCCcCCC
Q psy3619         167 GVMCETNIDDCKS-NPCLNGGICRDGVAKFTCDCPPGWTGS  206 (418)
Q Consensus       167 g~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~G~  206 (418)
                      |..|+ ++++|.. ++|  +++|+++.++|+|.|++||+|.
T Consensus        74 g~~C~-dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           74 GFICT-DIDECENGGFC--SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             TTEEE-ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred             CCccc-cccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence            77885 7888876 778  6788888888888888888764

>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A

Probab=99.60  E-value=4.7e-15  Score=127.47  Aligned_cols=109  Identities=16%  Similarity=0.213  Sum_probs=80.6

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+++.  .+...+.+.+..+++||+||+|.|.|+++.++|+||+........++....|++.+.||||+.+.
T Consensus        66 l~L~~G~l~~~~~--~G~g~~~~~s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~  143 (195)
T 3sh4_A           66 LGLQDGHLVFRYQ--LGSGEARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPD  143 (195)
T ss_dssp             EEEETTEEEEEEE--CSSCEEEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTT
T ss_pred             EEEeCCEEEEEEE--CCCCcEEEEcCceeCCCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCC
Confidence            3344444444444  44445566788899999999999999999999999998766655566667788899999998765


Q ss_pred             CCC--CCccCCCceEEeeeEEec--------CeecChhhhh
Q psy3619         328 DNI--KAYTEAGFEGKLTKVQIW--------NRALDFTNEI  358 (418)
Q Consensus       328 ~~~--~~~~~~~F~GCi~~l~in--------~~~l~l~~~~  358 (418)
                      ...  ......+|+|||++|+||        ++.|||.+.+
T Consensus       144 ~~~~~~~~~~~~F~GCi~~l~in~~~~~~~~~~~ldl~~~a  184 (195)
T 3sh4_A          144 VATLTGGRFSSGITGCVKNLVLHSARPGAPPPQPLDLQHRA  184 (195)
T ss_dssp             HHHHTTTSCCCCCSEEEEEEEEEECCTTCCCCCCCCTTTSC
T ss_pred             cccccccccccCCEEEEEEEEECCcCCCCCCceeecchhhh
Confidence            321  112347899999999997        6788887644

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.58  E-value=6.4e-16  Score=114.89  Aligned_cols=87  Identities=24%  Similarity=0.500  Sum_probs=75.4

Q ss_pred             CeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc-cCCCcCCCCCCCCCCcceeecCC--
Q psy3619          78 GFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE-ADIDECLSDPCSPEGTDKCLDLD--  154 (418)
Q Consensus        78 ~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~-~~~~~C~~~~c~~~~~~~C~~~~--  154 (418)
                      +|+|.|.+||+|..|+  +++|...||      ++..++|+|.|++||+  .|+ .++++|..+||.+++.  |++..  
T Consensus         1 sy~C~C~~g~~g~~c~--~~~c~~~pC------~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~--C~~~~~~   68 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQ--QHQSWLRPV------LRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGT--CQQALYF   68 (91)
T ss_dssp             CCCCCCBCSSSCCBCC--SSCEEEEEC------SSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCE--EEEESSS
T ss_pred             CeeeECCCCCcCCeEC--CCcccCCcc------ccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCE--eecCCCC
Confidence            5899999999999995  788877664      4557889999999998  897 5889999999998876  99877  


Q ss_pred             CCeeeecCCCCcCccceecCCC
Q psy3619         155 NKFQCECNVGYTGVMCETNIDD  176 (418)
Q Consensus       155 ~~~~C~C~~G~~g~~C~~~~~~  176 (418)
                      ++|.|.|++||+|..|+.++++
T Consensus        69 ~~~~C~C~~G~~G~~Ce~~ide   90 (91)
T 1tpg_A           69 SDFVCQCPEGFAGKSCEIDTRA   90 (91)
T ss_dssp             SCEEEECCTTCBSSSCCBCSSC
T ss_pred             CCeEeECCCCCcCCcCCcCCCC
Confidence            8999999999999999876653

>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}

Probab=99.58  E-value=1.5e-14  Score=122.88  Aligned_cols=104  Identities=17%  Similarity=0.197  Sum_probs=75.4

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+++..+  .....+.+...++||+||+|.|.|.++.++|+||+........++....|+.. .||||+.+.
T Consensus        58 L~L~~G~l~~~~~~G--~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~  134 (182)
T 2r16_A           58 LELDAGRVKLTVNLG--KGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH-NIETGIITE  134 (182)
T ss_dssp             EEEETTEEEEEEESS--SCCEEEEECSSCCSSSCEEEEEEEETTEEEEEETTCCEEEEECCSSCCCEEEE-EEEESSCCC
T ss_pred             EEEECCEEEEEEECC--CCceEEEcCcccCCCCeEEEEEEEECCEEEEEECCceeEeEECCCCccEEecc-CeEECCccc
Confidence            334444444444433  33345567889999999999999999999999999776555556666667776 799998765


Q ss_pred             CCCCCccCCCceEEeeeEEecCeec-Ch
Q psy3619         328 DNIKAYTEAGFEGKLTKVQIWNRAL-DF  354 (418)
Q Consensus       328 ~~~~~~~~~~F~GCi~~l~in~~~l-~l  354 (418)
                      .........+|+|||++|+||++.+ ++
T Consensus       135 ~~~~~~~~~~F~GCi~~l~in~~~~~~~  162 (182)
T 2r16_A          135 RRYLSSVPSNFIGHLQSLTFNGMAYIDL  162 (182)
T ss_dssp             CTTCSSCCCCCEEEEEEEEETTEEHHHH
T ss_pred             ccccCCCCCCCEEEEeEEEECCEEhHHH
Confidence            4332223478999999999999985 44

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.57  E-value=8.5e-16  Score=120.50  Aligned_cols=94  Identities=29%  Similarity=0.684  Sum_probs=77.6

Q ss_pred             CCCCCCceEeeC-CCCeEEecCCCCccCCCccCCCC----CCCCCCCCCCeeecCCCCeeeeCCCCcc---CCccccCCC
Q psy3619          64 PNDSIPGTCTDL-VGGFSCSCDLGFTGKHCQHLIDD----CASEPCQNGGSCVDMLDGFMCQCRPGFV---GLQCEADID  135 (418)
Q Consensus        64 ~~c~~~~~C~~~-~g~~~C~C~~G~~g~~C~~~~~~----C~~~~C~~~~~C~~~~g~~~C~C~~G~~---g~~C~~~~~  135 (418)
                      .+|.  ++|+++ .++|+|.|++||+|..+.  +++    |...+|.  +.|++ .++|+|.|++||+   |..|+ +++
T Consensus        10 ~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~--~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~-did   81 (118)
T 1dx5_I           10 ANCE--YQCQPLDQTSYLCVCAEGFAPIPHE--PHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGFICT-DID   81 (118)
T ss_dssp             CCCS--SEEEECSSSCEEEECCTTEEEETTE--EEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTTEEE-ECC
T ss_pred             CCCC--CCCCCCCCCCEEeECCCCccccCCC--CCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCCccc-ccc
Confidence            4576  399999 899999999999988552  444    4455555  78998 5899999999999   88996 999


Q ss_pred             cCCC-CCCCCCCcceeecCCCCeeeecCCCCcCcc
Q psy3619         136 ECLS-DPCSPEGTDKCLDLDNKFQCECNVGYTGVM  169 (418)
Q Consensus       136 ~C~~-~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~  169 (418)
                      +|.. ++|  ++  .|++..++|+|.|++||+|..
T Consensus        82 eC~~~~~C--~~--~C~n~~g~y~C~C~~G~~g~~  112 (118)
T 1dx5_I           82 ECENGGFC--SG--VCHNLPGTFECICGPDSALAG  112 (118)
T ss_dssp             HHHHCSSC--SS--EEEECSSSEEEEECSSSSCEE
T ss_pred             ccCCCCCC--cC--eEEeCCCCEEEECCCCCccCC
Confidence            9987 777  33  599999999999999998754

>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*

Probab=99.56  E-value=1.4e-14  Score=121.45  Aligned_cols=106  Identities=14%  Similarity=0.204  Sum_probs=74.9

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+++..  +...+.+.+..+++||+||+|.|.|.++.++|+||+.........+   .++. ..||||+.+.
T Consensus        57 l~L~~G~l~~~~~~--g~~~~~~~s~~~vnDG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~---~l~~-~~lylGG~p~  130 (170)
T 1d2s_A           57 LGLRDGRPEIQLHN--HWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVS---GHPI-MRIALGGLLF  130 (170)
T ss_dssp             EEEETTEEEEEEES--SSCEEEEECSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEETTCC---CCCE-EEEEESSCSS
T ss_pred             EEEeCCEEEEEEEC--CCceEEEeCCCccCCCCCEEEEEEEeCCEEEEEECCeeeeeeccCC---Cccc-ccEEEECccc
Confidence            33444444444444  3345566778899999999999999999999999997765433221   1333 7899998765


Q ss_pred             CCCCC--ccCCCceEEeeeEEecCeecChhhhhh
Q psy3619         328 DNIKA--YTEAGFEGKLTKVQIWNRALDFTNEIQ  359 (418)
Q Consensus       328 ~~~~~--~~~~~F~GCi~~l~in~~~l~l~~~~~  359 (418)
                      .....  ....+|+||||+|+||++.+++.+.+.
T Consensus       131 ~~~~~~~~~~~~F~GCi~~l~in~~~~~l~~~~~  164 (170)
T 1d2s_A          131 PASNLRLPLVPALDGCLRRDSWLDKQAEISASAP  164 (170)
T ss_dssp             CGGGSSSCCCCCCCEEEEEEEESCGGGEEEEECS
T ss_pred             chhhcccCCCCCeeeEeEEeEECCccceeeeccc
Confidence            43221  224789999999999999998865554

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.56  E-value=2.5e-14  Score=136.69  Aligned_cols=147  Identities=26%  Similarity=0.660  Sum_probs=95.5

Q ss_pred             CCccccccCCCCcCccceeeecccccccCCccccccCCCCccCCCCCCcCCCCCCCCCCCceEeeCCCCeEEecCCCCcc
Q psy3619          10 PSSLVPDCVSEDTQQADYHIVASIAYRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVGGFSCSCDLGFTG   89 (418)
Q Consensus        10 ~g~~~C~C~~G~~~~~~~~~c~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~~~~~c~~~~~C~~~~g~~~C~C~~G~~g   89 (418)
                      .|.|.+.|..|+....... -.....|..|+.+..|...       |       .+|.++|+|.+  +.+.|.|++||+|
T Consensus       164 ~g~y~~~~~~g~~~~~~~~-~~~~c~C~~g~~G~~C~~~-------C-------~~C~~~G~C~~--~~g~C~C~~G~~G  226 (423)
T 2gy5_A          164 AGVYSARYIGGNLFTSAFT-RLIVRRCEAQKWGPECNHL-------C-------TACMNNGVCHE--DTGECICPPGFMG  226 (423)
T ss_dssp             CEEEEEEETTCCGGGCEEE-EEEECSSCTTEESTTSCEE-------C-------CCCCTTCEECT--TTCCEECCTTEES
T ss_pred             CCeEeeEECCCcEeccccc-cccCCcCCCCCCCCCCCCC-------C-------CCCCCCCEEEC--CCCcEeCCCCccC
Confidence            4667777777776532221 1112456777777776631       0       25888888986  4568999999999


Q ss_pred             CCCccCCC----------CCC-CCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCee
Q psy3619          90 KHCQHLID----------DCA-SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQ  158 (418)
Q Consensus        90 ~~C~~~~~----------~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~  158 (418)
                      ..|+.+.+          +|. ..+|.+++.|.  .++|+|.|++||+|..|+.                          
T Consensus       227 ~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~--------------------------  278 (423)
T 2gy5_A          227 RTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNE--------------------------  278 (423)
T ss_dssp             TTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCB--------------------------
T ss_pred             CCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccC--------------------------
Confidence            88874222          233 34566666775  3567888888888888862                          


Q ss_pred             eecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcC
Q psy3619         159 CECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD  211 (418)
Q Consensus       159 C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~  211 (418)
                       .|.+||.|..|+.   .|   +|.++++|.+..   .|.|++||+|..|+..
T Consensus       279 -~C~~G~~G~~C~~---~C---~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          279 -ACHPGFYGPDCKL---RC---SCNNGEMCDRFQ---GCLCSPGWQGLQCERE  321 (423)
T ss_dssp             -CCCTTBCSBTTCC---BC---CCTTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred             -ccCCCCcCCcccc---cc---cCCCCCEecCCC---ceECCCCCcCCCCccC
Confidence             3566666666652   23   577778887654   3888888888888754

>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*

Probab=99.54  E-value=4.1e-14  Score=119.69  Aligned_cols=104  Identities=19%  Similarity=0.255  Sum_probs=74.2

Q ss_pred             eEEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCC-cccCCCccEEeccc
Q psy3619         247 LIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSG-KSLPQYGWVVLGKP  325 (418)
Q Consensus       247 ~~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~-~~l~~~~~l~iG~~  325 (418)
                      .+.+....+.+.+..+.+...+. .+...++||+||+|.|.|.++.++|+||+.........+.. ..|+....||||+.
T Consensus        60 ~l~L~~G~l~~~~~~G~~~~~~~-~~~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~  138 (178)
T 3bod_A           60 ELHIHQGKIGVKFNVGTDDIAIE-ESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGK  138 (178)
T ss_dssp             EEEEETTEEEEEEESSSCCEEEE-CCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCC
T ss_pred             EEEEECCEEEEEEECCCCceEEe-cCCcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecc
Confidence            34444444445554443333333 35678999999999999999999999999765443323332 45888889999986


Q ss_pred             CCCCCCCccCCCceEEeeeEEecCee-cChhhhh
Q psy3619         326 RPDNIKAYTEAGFEGKLTKVQIWNRA-LDFTNEI  358 (418)
Q Consensus       326 ~~~~~~~~~~~~F~GCi~~l~in~~~-l~l~~~~  358 (418)
                      +.       ..+|+|||++|+||++. |++....
T Consensus       139 p~-------~~~F~GCi~~v~in~~~vl~l~~~~  165 (178)
T 3bod_A          139 EQ-------GQPFQGQLSGLYYNGLKVLNMAAEN  165 (178)
T ss_dssp             TT-------SCBCCEEEEEEEETTEEHHHHHHTT
T ss_pred             cC-------CCCCEEEEEEEEECCEehHhHhhcC
Confidence            65       27899999999999997 7775543

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.52  E-value=3.8e-15  Score=149.02  Aligned_cols=147  Identities=28%  Similarity=0.682  Sum_probs=114.9

Q ss_pred             CCCCCCCceEeeCCCCeEEecCCCCccCCCccCCC---------CCCCC----CCCCCCeeecCCCCeeeeCC------C
Q psy3619          63 TPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLID---------DCASE----PCQNGGSCVDMLDGFMCQCR------P  123 (418)
Q Consensus        63 ~~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~---------~C~~~----~C~~~~~C~~~~g~~~C~C~------~  123 (418)
                      ...|.++|.|..    ..|.|++||+|..|+.+++         .|...    +|.+++.|+.    .+|.|+      +
T Consensus       434 s~~Cs~~G~C~~----g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~~  505 (687)
T 3k6s_B          434 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGK  505 (687)
T ss_dssp             SSTGGGSEEESS----SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTTC
T ss_pred             CCCCCCCCEEeC----CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCCC
Confidence            357999999983    4699999999999985444         58754    4999999994    389999      9


Q ss_pred             CccCCccccCCCcCCC---CCCCCCCcceeecCCCCeeeecCCCCcCcccee--cCCCCCCC---CCCCCcEEEeCCCCe
Q psy3619         124 GFVGLQCEADIDECLS---DPCSPEGTDKCLDLDNKFQCECNVGYTGVMCET--NIDDCKSN---PCLNGGICRDGVAKF  195 (418)
Q Consensus       124 G~~g~~C~~~~~~C~~---~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~--~~~~C~~~---~C~~~~~C~~~~~~~  195 (418)
                      ||+|..|+.+.+.|..   .+|.....+.|..    ..|.|++||+|..|+.  ..+.|...   +|.++|+|..    +
T Consensus       506 G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g  577 (687)
T 3k6s_B          506 LIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----N  577 (687)
T ss_dssp             CEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----S
T ss_pred             CccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----C
Confidence            9999999877788863   3465400344874    2899999999999983  35678764   7999999976    3


Q ss_pred             EEeCCCCcCCCCcCcCCCCCcCCCCCCCCeEe
Q psy3619         196 TCDCPPGWTGSRCEKDIGSCTNMPCQNDANCI  227 (418)
Q Consensus       196 ~C~C~~G~~G~~C~~~~~~C~~~~c~~~~~C~  227 (418)
                      .|.|++||+|..|+.. ..|. .+|.+++.|+
T Consensus       578 ~C~C~~Gy~G~~Ce~c-~~C~-~~C~~~g~Cv  607 (687)
T 3k6s_B          578 VCECHSGYQLPLCQEC-PGCP-SPCGKYISCA  607 (687)
T ss_dssp             CBCCSTTCCTTTTCCC-TTSC-CCCTTTHHHH
T ss_pred             EEECCCCCcCCCCCCC-CCCC-cccCCCCCCC
Confidence            6999999999999852 4574 5888888887

>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*

Probab=99.52  E-value=5.1e-14  Score=122.06  Aligned_cols=116  Identities=14%  Similarity=0.207  Sum_probs=76.9

Q ss_pred             EecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecC-C-CcccCCCccEEecccC
Q psy3619         249 QAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYG-S-GKSLPQYGWVVLGKPR  326 (418)
Q Consensus       249 ~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~-~-~~~l~~~~~l~iG~~~  326 (418)
                      .+....+.+++..  +...+.+.+..+++||+||+|.|.|.++.++|+||+.......... . ...+...+.||||+.+
T Consensus        70 ~L~~G~l~~~~~~--g~~~~~~~s~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p  147 (205)
T 1f5f_A           70 GLRDGRPEIQLHN--HWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLL  147 (205)
T ss_dssp             EEETTEEEEEEES--SSCEEEEECSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSCCCCC----CCEEEEEESSCS
T ss_pred             EEECCEEEEEEEC--CCceEEEecCCccCCCCCEEEEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCCceEEEeCcc
Confidence            3344444444443  3345566778899999999999999999999999997765432111 1 1123334799998876


Q ss_pred             CCCCC--CccCCCceEEeeeEEecCeecChhhhhhhcCCCCC
Q psy3619         327 PDNIK--AYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCR  366 (418)
Q Consensus       327 ~~~~~--~~~~~~F~GCi~~l~in~~~l~l~~~~~~~~~~C~  366 (418)
                      .....  .....+|+|||++|+|+++.++|.......+..|.
T Consensus       148 ~~~~~~~~~~~~~F~GCi~~l~i~~~~~~l~~~~~~~v~~C~  189 (205)
T 1f5f_A          148 FPASNLRLPLVPALDGCLRRDSWLDKQAEISASAPTSLRSCD  189 (205)
T ss_dssp             SCGGGSSSCCCCCCCEEEEEEECSCGGGEEEEECSSCCCBC-
T ss_pred             CccccccccCCCCeeEEeeeeEECCeeccccccCcccCCCCC
Confidence            53321  12237899999999999999999664443455563

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.51  E-value=1.2e-15  Score=124.88  Aligned_cols=126  Identities=27%  Similarity=0.589  Sum_probs=63.4

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCccceecC
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNI  174 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~  174 (418)
                      |||+|+.+||.+ ++|+++.++|+|.|++||+|..+.              .  .|++..   ...|..+|.|..|+.++
T Consensus         3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~--------------~--~C~~~~---~~~C~~~~~g~~C~~~~   62 (147)
T 2w86_A            3 DIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK--------------T--ICIETI---KGTCWQTVIDGRCEINI   62 (147)
T ss_dssp             CCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS--------------S--BEEECC---CEEEEEEEETTEEEEEE
T ss_pred             cCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC--------------C--eecCCC---CCcccCCCCCCccccCC
Confidence            567777667753 577777777777777777654331              0  122221   12334444444554444


Q ss_pred             CCCCCC-------CCCCCcEEEeCCCCeEEeCCCCcC---CCCcCcCCCCCcCCC--CCCCCeEeecCCCeEEEeCCCCC
Q psy3619         175 DDCKSN-------PCLNGGICRDGVAKFTCDCPPGWT---GSRCEKDIGSCTNMP--CQNDANCIDLFQDFFCVSSHSVQ  242 (418)
Q Consensus       175 ~~C~~~-------~C~~~~~C~~~~~~~~C~C~~G~~---G~~C~~~~~~C~~~~--c~~~~~C~~~~~~~~c~c~~~~~  242 (418)
                      +.|...       ....++.|..  -.|.|.|++||+   |..|+ +|++|...+  |.+ +.|+++.++|+|.|+++|.
T Consensus        63 ~~c~~~~~C~~~~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~  138 (147)
T 2w86_A           63 NGATLKSQCCSSLGAAWGSPCTL--CQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT  138 (147)
T ss_dssp             EEEECHHHHHTTTCSEETTTTEE--CCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred             CccccCCccccCcCcccCCCccc--CCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence            443210       0001111111  124566666663   56665 566665433  553 3666666666666666665


Q ss_pred             CC
Q psy3619         243 GR  244 (418)
Q Consensus       243 ~~  244 (418)
                      +.
T Consensus       139 g~  140 (147)
T 2w86_A          139 LD  140 (147)
T ss_dssp             BC
T ss_pred             cC
Confidence            54

>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}

Probab=99.50  E-value=8.1e-14  Score=118.76  Aligned_cols=107  Identities=14%  Similarity=0.149  Sum_probs=74.5

Q ss_pred             EEecccCcEEEeccCccceEE-eeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFL-AFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPR  326 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~-~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~  326 (418)
                      +.+....+.+.+..+.+.... ...+...++||+||+|.|.|.++.++|+||+........++....++....||||+.+
T Consensus        57 l~L~~G~l~~~~~~G~g~~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p  136 (184)
T 2h0b_A           57 LALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP  136 (184)
T ss_dssp             EEEETTEEEEEEEESSCEEEEEECCSSSCSSSSSCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCT
T ss_pred             EEEECCEEEEEEECCCCeEEEEEecCCcccCCCCeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCC
Confidence            333444444444443332222 2346678999999999999999999999999766655445555567777899999876


Q ss_pred             CCCCC--CccCCCceEEeeeEEecCeecCh
Q psy3619         327 PDNIK--AYTEAGFEGKLTKVQIWNRALDF  354 (418)
Q Consensus       327 ~~~~~--~~~~~~F~GCi~~l~in~~~l~l  354 (418)
                      .....  .....+|+|||++|+||++.++|
T Consensus       137 ~~~~~~~~~~~~~F~GCi~~v~in~~~~~l  166 (184)
T 2h0b_A          137 STADLPGSPVSNNFMGCLKEVVYKNNDVRL  166 (184)
T ss_dssp             TGGGSTTCSCCCBCEEEEEEEEEEESSCEE
T ss_pred             ccccCcCCcccCCCEEEeeEEEECCEEcch
Confidence            54322  22347899999999999988754

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.45  E-value=8.9e-16  Score=125.77  Aligned_cols=111  Identities=26%  Similarity=0.545  Sum_probs=67.1

Q ss_pred             CCc-ccccCCCccccccCCCCcCccceeeecccc--cccCCccccccCCCCccCCCCCCcCCCCCCCCCCCceEeeCCC-
Q psy3619           2 CDQ-KTLWTPSSLVPDCVSEDTQQADYHIVASIA--YRANGAVANLCLKPTFISPTPLFPVINDTPNDSIPGTCTDLVG-   77 (418)
Q Consensus         2 C~~-~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~--~~~~g~~~~~C~~~~~~~~~~~~~~~~~~~~c~~~~~C~~~~g-   77 (418)
                      |.+ .|++++++|+|.|++||++..+...|.++.  .|..++.+..|....              +.|..++.|.+..+ 
T Consensus        12 C~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~--------------~~c~~~~~C~~~~g~   77 (147)
T 2w86_A           12 CINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEINI--------------NGATLKSQCCSSLGA   77 (147)
T ss_dssp             SBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEE--------------EEEECHHHHHTTTCS
T ss_pred             CCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCC--------------CccccCCccccCcCc
Confidence            543 799999999999999999877777776532  232222222332110              01111112222222 


Q ss_pred             ---------CeEEecCCCCc---cCCCccCCCCCCCCC--CCCCCeeecCCCCeeeeCCCCccCC
Q psy3619          78 ---------GFSCSCDLGFT---GKHCQHLIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFVGL  128 (418)
Q Consensus        78 ---------~~~C~C~~G~~---g~~C~~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~g~  128 (418)
                               .|.|.|++||+   |..|+ +||+|+..|  |.+ ++|+++.++|+|.|++||+|.
T Consensus        78 ~~g~~C~~c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~  140 (147)
T 2w86_A           78 AWGSPCTLCQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLD  140 (147)
T ss_dssp             EETTTTEECCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBC
T ss_pred             ccCCCcccCCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccC
Confidence                     25677777774   67776 777776433  763 477777777777777777754

>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}

Probab=99.43  E-value=1e-12  Score=125.43  Aligned_cols=103  Identities=15%  Similarity=0.206  Sum_probs=79.1

Q ss_pred             EEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCC---
Q psy3619         256 QVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKA---  332 (418)
Q Consensus       256 ~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~---  332 (418)
                      .+.+...++.....+.+...++||+||+|.|.|.++.++|+||+.........+....|++...||||+.+......   
T Consensus        80 ~l~~~~~~g~~~~~~~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~  159 (383)
T 2jd4_A           80 RLHFMFDLGKGRTKVSHPALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIG  159 (383)
T ss_dssp             EEEEEEECSSCEEEEECCCCCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSC
T ss_pred             EEEEEEECCCCeEEEeCcceecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCccccccccc
Confidence            33433334444555667889999999999999999999999999877766555666778888999998866543221   


Q ss_pred             ccCCCceEEeeeEEecCeecChhhhh
Q psy3619         333 YTEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       333 ~~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      ....+|+|||++|+||++.++|.++.
T Consensus       160 ~~~~~F~GCi~~l~in~~~l~l~~~~  185 (383)
T 2jd4_A          160 TITHSIPACIGEIMVNGQQLDKDRPL  185 (383)
T ss_dssp             SCCSBCCEEEEEEEETTEECCTTSCS
T ss_pred             ccCCCceEEeEEEEECCEEeccCCcc
Confidence            22378999999999999999987654

>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*

Probab=99.42  E-value=3.6e-13  Score=130.04  Aligned_cols=101  Identities=11%  Similarity=0.032  Sum_probs=68.3

Q ss_pred             EEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccC---CCccEEecccCCCCCCCc
Q psy3619         257 VSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLP---QYGWVVLGKPRPDNIKAY  333 (418)
Q Consensus       257 l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~---~~~~l~iG~~~~~~~~~~  333 (418)
                      +.+....+.....+.+..+++||+||+|.|.|.++.++|+||+........++....|+   +...||||+.+.......
T Consensus        99 l~~~~~~g~~~~~~~~~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~  178 (422)
T 1h30_A           99 LELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLV  178 (422)
T ss_dssp             EEEEEEETTEEEEEEEEEECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSS
T ss_pred             EEEEEECCCCcEEEecCceecCCCCEEEEEEEcCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCcccccccc
Confidence            33333333444555678899999999999999999999999998766655555656666   568999998765443221


Q ss_pred             --cCCCceEEeeeEEecCe-ecChhhh
Q psy3619         334 --TEAGFEGKLTKVQIWNR-ALDFTNE  357 (418)
Q Consensus       334 --~~~~F~GCi~~l~in~~-~l~l~~~  357 (418)
                        ...+|+|||++|+||++ .+++.+.
T Consensus       179 ~~~~~~F~GCi~~v~i~~~~~~~l~~~  205 (422)
T 1h30_A          179 QPINPRLDGCMRSWNWLNGEDTTIQET  205 (422)
T ss_dssp             SCCCCCCCEEEEEEEEC---------C
T ss_pred             cccCCCCeEEEEEeEECCccccchhhh
Confidence              23689999999999554 4476543

>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*

Probab=99.42  E-value=1.1e-12  Score=114.89  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             EEecccCcEEEeccCccceEEeeec-cccccCCCceEEEEEEeCCEEEEEEcCeeecc-ceecCCCcccCCCccEEeccc
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHE-YATINDGQWHHVAIVWTQGTLTLITEGLIAGK-VENYGSGKSLPQYGWVVLGKP  325 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s-~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~-~~~~~~~~~l~~~~~l~iG~~  325 (418)
                      +.+....+.+.+..+  .....+.+ ...++||+||+|.|.|.++.++|+||+..... ....+....|+....||||+.
T Consensus        95 L~L~~G~l~~~~~~G--~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~  172 (226)
T 2r1d_A           95 LHIHQGKIGVKFNVG--TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGK  172 (226)
T ss_dssp             EEEETTEEEEEEESS--SCEEEEECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESST
T ss_pred             EEEECCEEEEEEECC--CCcEEEEeCCeEecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccc
Confidence            334444444444433  33334443 46899999999999999999999999975332 233445567888889999987


Q ss_pred             CCCCCCCccCCCceEEeeeEEecCee-cChh
Q psy3619         326 RPDNIKAYTEAGFEGKLTKVQIWNRA-LDFT  355 (418)
Q Consensus       326 ~~~~~~~~~~~~F~GCi~~l~in~~~-l~l~  355 (418)
                      +.       ..+|+|||++|+||++. ++++
T Consensus       173 p~-------~~~F~GCi~~v~ing~~vl~la  196 (226)
T 2r1d_A          173 EQ-------GQPFQGQLSGLYYNGLKVLNMA  196 (226)
T ss_dssp             TT-------TCCCCEEEEEEEETTBCHHHHH
T ss_pred             cC-------CCCCeEEEeeEEECCEeHHhhh
Confidence            64       27899999999999985 4553

>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*

Probab=99.41  E-value=7e-13  Score=115.82  Aligned_cols=102  Identities=21%  Similarity=0.287  Sum_probs=67.2

Q ss_pred             eEEecccCcEEEeccCccceEEeeec-cccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCc--c----------
Q psy3619         247 LIQAHSSGVQVSLFPELQDAFLAFHE-YATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGK--S----------  313 (418)
Q Consensus       247 ~~~~~~~~v~l~~~~~~~~~~~~~~s-~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~--~----------  313 (418)
                      .+.+....+++++..+..  ...+.+ ...++||+||+|+|.|.++.++|+||+.........+...  .          
T Consensus        66 ~LeL~~G~l~~~~~~G~~--~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~ip~  143 (220)
T 2r1b_A           66 ELHIHQGKIGVKFNVGTD--DIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPY  143 (220)
T ss_dssp             EEEEETTEEEEEEESSSS--CEEEECTTCCCCSSSCEEEEEEEETTEEEEEETTSCCEEECC-----------------C
T ss_pred             EEEEECCEEEEEEECCCC--ceEEEeCceEecCCceEEEEEEEeCCEEEEEECCcceeeeccCCCccchheecccccccc
Confidence            344444444455544433  333333 3679999999999999999999999997543321122110  1          


Q ss_pred             -------------------cCCCccEEecccCCCCCCCccCCCceEEeeeEEecCee-cChhhh
Q psy3619         314 -------------------LPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRA-LDFTNE  357 (418)
Q Consensus       314 -------------------l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~-l~l~~~  357 (418)
                                         ++....||||+.+       ...+|+|||++|+||++. ++|+..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~n~~~~l~lGG~p-------~~~~F~GCi~~l~ing~~vl~la~~  200 (220)
T 2r1b_A          144 RLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE-------QGQPFQGQLSGLYYNGLKVLNMAAE  200 (220)
T ss_dssp             HHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT-------TTCCCCEEEEEEEETTBCHHHHHHT
T ss_pred             ccccccccccccccccceEecCCCcEEECCcc-------CCCCCEEEEeEEEECCChHHhHhhc
Confidence                               2336789999866       247899999999999985 576543

>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A

Probab=99.41  E-value=1.5e-12  Score=124.60  Aligned_cols=122  Identities=15%  Similarity=0.179  Sum_probs=85.3

Q ss_pred             ceEEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEeccc
Q psy3619         246 PLIQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKP  325 (418)
Q Consensus       246 ~~~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~  325 (418)
                      .++.+.-....+.+...++.....+.+...++||+||+|.|.|.++.++|+||+....... ++....|++...||||+.
T Consensus        84 dfi~l~L~~G~l~~~~~~g~g~~~~~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~g~~~~l~~~~~l~vGG~  162 (394)
T 1dyk_A           84 DFATVQLRNGFPYFSYDLGSGDTSTMIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTIS-PKKADILDVVGILYVGGL  162 (394)
T ss_dssp             SEEEEEEETTEEEEEEESSSCEEEEECCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEEC-STTCCCCCCCSEEEESSC
T ss_pred             ceEEEEEECCEEEEEEECCCCceEEEcccccCCCCEEEEEEEEeCCEEEEEEcCcccceec-CCCCceecCCCCEEEccc
Confidence            3333333333344444444445556678899999999999999999999999998766544 566677888899999986


Q ss_pred             CCCCCCC---ccCCCceEEeeeEEecCeecChhhhhhh-cCCCCCCC
Q psy3619         326 RPDNIKA---YTEAGFEGKLTKVQIWNRALDFTNEIQK-QVRDCRTE  368 (418)
Q Consensus       326 ~~~~~~~---~~~~~F~GCi~~l~in~~~l~l~~~~~~-~~~~C~~~  368 (418)
                      +......   ....+|+|||++|+||++.++|.+.... ....|...
T Consensus       163 p~~~~~~~~~~~~~~F~GCi~~l~in~~~~~l~~~~~~~~~~~C~~~  209 (394)
T 1dyk_A          163 PINYTTRRIGPVTYSLDGCVRNLHMEQAPVDLDQPTSSFHVGTCFAN  209 (394)
T ss_dssp             CTTCCCCSSCSCCSBCSEEEEEEEESSSCCCTTSCSEEESCBCCBSS
T ss_pred             CCcccccccccCCCCccEeeeEEEECCEEecCCCccccCcCCCCCCC
Confidence            6543221   1236899999999999999998765322 13456544

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=99.40  E-value=4.9e-13  Score=127.80  Aligned_cols=126  Identities=32%  Similarity=0.793  Sum_probs=91.9

Q ss_pred             CeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCC----------cCC-CCCCCCCC
Q psy3619          78 GFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID----------ECL-SDPCSPEG  146 (418)
Q Consensus        78 ~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~----------~C~-~~~c~~~~  146 (418)
                      .+.|.|++||.|+.|+.   .|.  ||.++++|++  +.++|.|++||+|..|+...+          +|. .++|..++
T Consensus       184 ~~~c~C~~g~~G~~C~~---~C~--~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g  256 (423)
T 2gy5_A          184 LIVRRCEAQKWGPECNH---LCT--ACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYV  256 (423)
T ss_dssp             EEECSSCTTEESTTSCE---ECC--CCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCC
T ss_pred             ccCCcCCCCCCCCCCCC---CCC--CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCC
Confidence            45689999999999973   453  7999999987  467999999999999974322          222 22333333


Q ss_pred             cceeecCCCCeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcCCCCCCCCeE
Q psy3619         147 TDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANC  226 (418)
Q Consensus       147 ~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~c~~~~~C  226 (418)
                      .  |.  .+.|.|.|++||+|..|+.                         .|++||.|..|+.   .|   +|.+++.|
T Consensus       257 ~--C~--~~~~~C~C~~G~~G~~C~~-------------------------~C~~G~~G~~C~~---~C---~C~ngg~C  301 (423)
T 2gy5_A          257 F--CL--PDPYGCSCATGWKGLQCNE-------------------------ACHPGFYGPDCKL---RC---SCNNGEMC  301 (423)
T ss_dssp             E--EE--TTTTEEECCBTCBSGGGCB-------------------------CCCTTBCSBTTCC---BC---CCTTCCEE
T ss_pred             E--EC--CCCCeEEeCCCcccccccC-------------------------ccCCCCcCCcccc---cc---cCCCCCEe
Confidence            2  53  4567888888888887762                         4777888877763   23   68889999


Q ss_pred             eecCCCeEEEeCCCCCCCcceE
Q psy3619         227 IDLFQDFFCVSSHSVQGRRPLI  248 (418)
Q Consensus       227 ~~~~~~~~c~c~~~~~~~~~~~  248 (418)
                      .+..+   |.|+++|.|.....
T Consensus       302 ~~~~~---C~C~~G~~G~~Ce~  320 (423)
T 2gy5_A          302 DRFQG---CLCSPGWQGLQCER  320 (423)
T ss_dssp             ETTTE---EECCTTCBSTTSCB
T ss_pred             cCCCc---eECCCCCcCCCCcc
Confidence            87653   99999999976443

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.39  E-value=4.8e-13  Score=97.34  Aligned_cols=72  Identities=31%  Similarity=0.913  Sum_probs=57.8

Q ss_pred             CccCCCCCCC-CCCCCCCeeecCCCCeeeeCCCCcc--CCccccCCCcCC-CCCCCCCCcceeecCCCCeeeecCCCCcC
Q psy3619          92 CQHLIDDCAS-EPCQNGGSCVDMLDGFMCQCRPGFV--GLQCEADIDECL-SDPCSPEGTDKCLDLDNKFQCECNVGYTG  167 (418)
Q Consensus        92 C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--g~~C~~~~~~C~-~~~c~~~~~~~C~~~~~~~~C~C~~G~~g  167 (418)
                      |+ |+|+|+. .||.+ ++|+++.++|+|.|++||+  |..|+ ++++|. .++|.. +  .|++..++|.|.|++||+|
T Consensus         2 C~-dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~--~C~n~~g~y~C~C~~G~~g   75 (82)
T 1emn_A            2 AV-DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-G--TCKNVIGGFECTCEEGFEP   75 (82)
T ss_dssp             CC-CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-S--CEEECSSSEEECCSSSSCC
T ss_pred             CC-ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-C--EeECCCCCEEeECCCCeEe
Confidence            55 7888885 77864 8899988899999999997  88886 888887 677764 3  4888888899999999887


Q ss_pred             cc
Q psy3619         168 VM  169 (418)
Q Consensus       168 ~~  169 (418)
                      ..
T Consensus        76 ~~   77 (82)
T 1emn_A           76 GP   77 (82)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.39  E-value=2.7e-13  Score=98.65  Aligned_cols=63  Identities=33%  Similarity=0.935  Sum_probs=55.9

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCc--cCCCccCCCCCC-CCCCCCCCeeecCCCCeeeeCCCCccCCc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFT--GKHCQHLIDDCA-SEPCQNGGSCVDMLDGFMCQCRPGFVGLQ  129 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~--g~~C~~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  129 (418)
                      .+|. +++|+++.++|+|.|++||+  |..|+ ++++|. .++|.+ ++|+++.++|+|.|++||+|..
T Consensus        12 ~~C~-~g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           12 DVCK-HGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             TSCS-SSEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred             CCcC-CCEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence            3575 48999999999999999998  89997 899998 788975 6999999999999999999743

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.36  E-value=4.7e-13  Score=108.75  Aligned_cols=67  Identities=25%  Similarity=0.645  Sum_probs=49.4

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCCee-ecCCCCeeeeCCCCcc----CCccc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSC-VDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C-~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      ++|.++|+|+++.++|+|.|++||+|..|+ ++++|...++....+| +++.++|+|.|++||+    |..|+
T Consensus        54 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L           54 NPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             CSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred             CCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence            467777888888888888888888888887 5677876543333378 7777888888888887    67776

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.35  E-value=5.3e-13  Score=103.87  Aligned_cols=91  Identities=27%  Similarity=0.593  Sum_probs=64.2

Q ss_pred             CCCCCCCCC--------CCCCCeeecCCCCeeeeCCCCccCCccccCC--CcCCCCCCCCCCcceeecCCCCeeeecCCC
Q psy3619          95 LIDDCASEP--------CQNGGSCVDMLDGFMCQCRPGFVGLQCEADI--DECLSDPCSPEGTDKCLDLDNKFQCECNVG  164 (418)
Q Consensus        95 ~~~~C~~~~--------C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~--~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G  164 (418)
                      |+|+|+.+|        |.++++|+++.++|+|.|++||+|..|+..+  ++|...+..+..  .|++..++|+|.|++|
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G   82 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPG   82 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTT
T ss_pred             ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCC
Confidence            788898888        9999999999999999999999999998443  468654333333  5999999999999999


Q ss_pred             CcC----ccceecCCCCCCCCCCCCcEEEeC
Q psy3619         165 YTG----VMCETNIDDCKSNPCLNGGICRDG  191 (418)
Q Consensus       165 ~~g----~~C~~~~~~C~~~~C~~~~~C~~~  191 (418)
                      |+|    ..|+.    ....||...+.|+..
T Consensus        83 ~~~~~~g~~C~~----~~~~pC~~~~~~i~~  109 (114)
T 1aut_L           83 YKLGDDLLQCHP----AVKFPCGRPWKRMEK  109 (114)
T ss_dssp             EEECTTSSCEEE----CSSSCTTCCC-----
T ss_pred             eeECCCCCccCc----CcccCCCCCCccCCC
Confidence            984    45542    234578777776643

>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}

Probab=99.35  E-value=7e-12  Score=119.60  Aligned_cols=86  Identities=15%  Similarity=0.236  Sum_probs=62.5

Q ss_pred             cccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCC--CccCCCceEEeeeEEecCe
Q psy3619         273 YATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK--AYTEAGFEGKLTKVQIWNR  350 (418)
Q Consensus       273 ~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~--~~~~~~F~GCi~~l~in~~  350 (418)
                      ...++||+||+|.|.|.++.++|+||+..............++....||||+.+.....  .....+|+|||++|+||++
T Consensus       277 ~~~l~DG~WH~V~l~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~~  356 (383)
T 2jd4_A          277 ARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRG  356 (383)
T ss_dssp             TTGGGSSSCEEEEEEEETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC--
T ss_pred             CccccCCCcEEEEEEEcCCEEEEEECCeecccccCCCCcccccCCCCEEEeccccccccCCccccCCCceEccEEEECCC
Confidence            46799999999999999999999999987655433334456888889999887654322  1234789999999999997


Q ss_pred             e----cChhhhh
Q psy3619         351 A----LDFTNEI  358 (418)
Q Consensus       351 ~----l~l~~~~  358 (418)
                      .    +||...+
T Consensus       357 ~~~~~~dl~~~~  368 (383)
T 2jd4_A          357 SQVQSLDLSRAF  368 (383)
T ss_dssp             -CCEECCGGGCS
T ss_pred             CcccccChhhHH
Confidence            4    7886543

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.35  E-value=5.9e-13  Score=108.14  Aligned_cols=78  Identities=33%  Similarity=0.724  Sum_probs=62.4

Q ss_pred             CCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCccee-ecCCCCeeeecCCCCc--
Q psy3619          90 KHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKC-LDLDNKFQCECNVGYT--  166 (418)
Q Consensus        90 ~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C-~~~~~~~~C~C~~G~~--  166 (418)
                      ..|. ++|+|+.+||.++++|+++.++|+|.|++||+|..|+ ++++|...+..+..  .| ++..++|.|.|++||+  
T Consensus        43 ~~c~-dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~  118 (146)
T 1x7a_L           43 KQYV-DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLA  118 (146)
T ss_dssp             --------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEEC
T ss_pred             ccCC-CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeC
Confidence            3566 8999999999999999999999999999999999998 66999875433433  49 8999999999999998  


Q ss_pred             --Cccce
Q psy3619         167 --GVMCE  171 (418)
Q Consensus       167 --g~~C~  171 (418)
                        |..|+
T Consensus       119 ~dG~~C~  125 (146)
T 1x7a_L          119 PDQKSCK  125 (146)
T ss_dssp             TTSSSEE
T ss_pred             CCCCcCC
Confidence              78887

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.34  E-value=2.9e-13  Score=99.80  Aligned_cols=68  Identities=31%  Similarity=0.810  Sum_probs=59.3

Q ss_pred             CCCCceEeeCCCCeEEecCCCCc----cCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCC
Q psy3619          66 DSIPGTCTDLVGGFSCSCDLGFT----GKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECL  138 (418)
Q Consensus        66 c~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~  138 (418)
                      | .+++|+++.++|+|.|++||+    |..|+ ++++|...+|.  ++|+++.++|+|.|+ ||.|..+..+...|.
T Consensus        13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~~~~~~C~   84 (87)
T 1z6c_A           13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLAQDQKSCE   84 (87)
T ss_dssp             B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCCTTSSSCB
T ss_pred             C-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcccCCCCcce
Confidence            7 678999999999999999999    78997 89999988987  799999999999998 888877765555554

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.33  E-value=5.6e-13  Score=98.26  Aligned_cols=77  Identities=30%  Similarity=0.866  Sum_probs=59.6

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCeeeeCCCCcc----CCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcCc
Q psy3619          95 LIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGV  168 (418)
Q Consensus        95 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~  168 (418)
                      |+|+|+.+|  | .+++|+++.++|+|.|++||+    |..|+ ++++|..++|.  +  .|+++.++|+|.|+ ||.|.
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~--~C~n~~g~y~C~C~-g~~G~   74 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--Q--LCVNYPGGYTCYCD-GKKGF   74 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--S--EECCCSSSCCEECC-SSSCC
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--C--EEEccCCCEEEECC-CCcCC
Confidence            688888777  7 678899888889999999998    77886 88888877775  2  48888888888887 77666


Q ss_pred             cceecCCCCC
Q psy3619         169 MCETNIDDCK  178 (418)
Q Consensus       169 ~C~~~~~~C~  178 (418)
                      .++.+.+.|.
T Consensus        75 ~~~~~~~~C~   84 (87)
T 1z6c_A           75 KLAQDQKSCE   84 (87)
T ss_dssp             BCCTTSSSCB
T ss_pred             cccCCCCcce
Confidence            6654444443

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.32  E-value=1.3e-12  Score=105.94  Aligned_cols=72  Identities=29%  Similarity=0.630  Sum_probs=58.7

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCC---eeecCCC-CeeeeCCCCcc----CCccccCCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGG---SCVDMLD-GFMCQCRPGFV----GLQCEADID  135 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~---~C~~~~g-~~~C~C~~G~~----g~~C~~~~~  135 (418)
                      .+|.++|+|+++.++|+|.|++||+|..|+.++++|...++.+++   +|+++.+ +|+|.|++||+    |..|+ +++
T Consensus        53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~-~~~  131 (142)
T 2c4f_L           53 SPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTV  131 (142)
T ss_dssp             CCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE-ESS
T ss_pred             CCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC-CCC
Confidence            568888999999999999999999999998556777555555444   8999998 99999999998    88887 444


Q ss_pred             c
Q psy3619         136 E  136 (418)
Q Consensus       136 ~  136 (418)
                      +
T Consensus       132 e  132 (142)
T 2c4f_L          132 E  132 (142)
T ss_dssp             S
T ss_pred             c
Confidence            3

>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A

Probab=99.32  E-value=1.3e-11  Score=118.12  Aligned_cols=85  Identities=18%  Similarity=0.245  Sum_probs=65.9

Q ss_pred             cccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCC--ccCCCceEEeeeEEecC-
Q psy3619         273 YATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKA--YTEAGFEGKLTKVQIWN-  349 (418)
Q Consensus       273 ~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~--~~~~~F~GCi~~l~in~-  349 (418)
                      ...++||+||+|.|.|.++.++|+||+..............++....||||+.+......  ....+|+|||++|+||+ 
T Consensus       289 ~~~l~DG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~~  368 (394)
T 1dyk_A          289 PGHMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKG  368 (394)
T ss_dssp             TTSTTSSSCEEEEEEEETTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECT
T ss_pred             CccccCCceEEEEEEEeCCEEEEEECCcccccccCCCcceecccCCCEEEcCCCccccccccccCCCCceeeeEEEECCc
Confidence            568999999999999999999999999765544333345567788899998876543221  13478999999999988 


Q ss_pred             ----eecChhhh
Q psy3619         350 ----RALDFTNE  357 (418)
Q Consensus       350 ----~~l~l~~~  357 (418)
                          +++||.+.
T Consensus       369 ~~~~~~~d~~~a  380 (394)
T 1dyk_A          369 TGKPLEVNFAKA  380 (394)
T ss_dssp             TSCCEECCGGGC
T ss_pred             cCcccccchhHh
Confidence                78888654

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.30  E-value=9.1e-13  Score=96.93  Aligned_cols=71  Identities=35%  Similarity=0.810  Sum_probs=52.0

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCeeeeCCCCcc-----CCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcC
Q psy3619          95 LIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFV-----GLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTG  167 (418)
Q Consensus        95 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~-----g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g  167 (418)
                      |||+|+..|  |.+ ++|+++.++|+|.|++||+     |..|+ ++++|...++.+. .+.|+++.++|+|.|++||++
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~   78 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL   78 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred             ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence            678887665  754 5888888888888888887     66776 7888876663332 135888888888888888876


Q ss_pred             c
Q psy3619         168 V  168 (418)
Q Consensus       168 ~  168 (418)
                      .
T Consensus        79 ~   79 (86)
T 1lmj_A           79 S   79 (86)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.30  E-value=5.8e-13  Score=97.99  Aligned_cols=61  Identities=36%  Similarity=0.920  Sum_probs=53.9

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCc-----cCCCccCCCCCCCCC--CCCCCeeecCCCCeeeeCCCCccCC
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFT-----GKHCQHLIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFVGL  128 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~-----g~~C~~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~g~  128 (418)
                      .|. +++|+++.++|+|.|++||+     |..|+ ++|+|...|  |. +++|+++.|+|+|.|++||++.
T Consensus        12 ~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~   79 (86)
T 1lmj_A           12 LCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   79 (86)
T ss_dssp             TTT-TSCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             CCC-CCEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence            474 46999999999999999998     78898 899998777  54 5899999999999999999864

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=99.30  E-value=1.5e-12  Score=130.31  Aligned_cols=130  Identities=29%  Similarity=0.667  Sum_probs=103.5

Q ss_pred             CCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCC---------cCCCC----CCCCCCcceeecCCCCeeeecC----
Q psy3619         100 ASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID---------ECLSD----PCSPEGTDKCLDLDNKFQCECN----  162 (418)
Q Consensus       100 ~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~---------~C~~~----~c~~~~~~~C~~~~~~~~C~C~----  162 (418)
                      ...+|..+++|+.    ..|.|.+||+|..|+.+++         .|...    +|..++  .|+.  +  .|.|+    
T Consensus       433 ~s~~Cs~~G~C~~----g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G--~C~~--G--~C~C~~~~~  502 (687)
T 3k6s_B          433 DRSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLG--DCVC--G--QCLCHTSDV  502 (687)
T ss_dssp             CSSTGGGSEEESS----SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSE--EEET--T--EEEECCCCS
T ss_pred             CCCCCCCCCEEeC----CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCC--EEeC--C--EEEcCCCCC
Confidence            5567988899973    5899999999999985443         47543    255554  4873  2  99999    


Q ss_pred             --CCCcCccceecCCCCCC---CCCCC--CcEEEeCCCCeEEeCCCCcCCCCcCc--CCCCCcCC---CCCCCCeEeecC
Q psy3619         163 --VGYTGVMCETNIDDCKS---NPCLN--GGICRDGVAKFTCDCPPGWTGSRCEK--DIGSCTNM---PCQNDANCIDLF  230 (418)
Q Consensus       163 --~G~~g~~C~~~~~~C~~---~~C~~--~~~C~~~~~~~~C~C~~G~~G~~C~~--~~~~C~~~---~c~~~~~C~~~~  230 (418)
                        +||+|..|+.+...|..   .+|.+  +|+|...    .|.|++||+|..|+.  +++.|...   +|..++.|..  
T Consensus       503 ~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--  576 (687)
T 3k6s_B          503 PGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--  576 (687)
T ss_dssp             TTCCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS--
T ss_pred             CCCCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC--
Confidence              99999999977888974   46988  8999853    799999999999983  35788765   7999999987  


Q ss_pred             CCeEEEeCCCCCCCcce
Q psy3619         231 QDFFCVSSHSVQGRRPL  247 (418)
Q Consensus       231 ~~~~c~c~~~~~~~~~~  247 (418)
                        ..|.|.++|.|....
T Consensus       577 --g~C~C~~Gy~G~~Ce  591 (687)
T 3k6s_B          577 --NVCECHSGYQLPLCQ  591 (687)
T ss_dssp             --SCBCCSTTCCTTTTC
T ss_pred             --CEEECCCCCcCCCCC
Confidence              569999999997644

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.30  E-value=5.5e-13  Score=112.74  Aligned_cols=88  Identities=34%  Similarity=0.705  Sum_probs=30.5

Q ss_pred             CCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCC-CcCCCCCCCCCCcceeecCCCCeeeecCCCCc---
Q psy3619          91 HCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADI-DECLSDPCSPEGTDKCLDLDNKFQCECNVGYT---  166 (418)
Q Consensus        91 ~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~-~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~---  166 (418)
                      .|. ++++|+.+||.++++|+++.++|+|.|++||+|..|+.++ ++|...+..+..  .|++..++|.|.|++||+   
T Consensus        38 ~c~-dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~  114 (195)
T 1nfu_B           38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD  114 (195)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred             cCC-CCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence            465 7999999999999999999999999999999999998656 788765433333  488888889999999988   


Q ss_pred             -CccceecCCCCCCCCCCCC
Q psy3619         167 -GVMCETNIDDCKSNPCLNG  185 (418)
Q Consensus       167 -g~~C~~~~~~C~~~~C~~~  185 (418)
                       |..|+. +   ...||.+.
T Consensus       115 dG~~C~~-~---~~~PC~~~  130 (195)
T 1nfu_B          115 NGKACIP-T---GPYPCGKQ  130 (195)
T ss_dssp             TSSCEEE-S---SSSCTTCC
T ss_pred             CCCcccc-C---CCCCCCCC
Confidence             778873 2   13456543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.27  E-value=2.8e-12  Score=103.88  Aligned_cols=79  Identities=43%  Similarity=0.871  Sum_probs=63.2

Q ss_pred             CccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCC-cceeecCCC-CeeeecCCCCc---
Q psy3619          92 CQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEG-TDKCLDLDN-KFQCECNVGYT---  166 (418)
Q Consensus        92 C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~-~~~C~~~~~-~~~C~C~~G~~---  166 (418)
                      |. ++++|+.+||.++++|+++.++|+|.|++||+|..|+.++++|...++..++ ...|++..+ +|.|.|++||+   
T Consensus        44 c~-did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~  122 (142)
T 2c4f_L           44 YS-DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA  122 (142)
T ss_dssp             HT-TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECT
T ss_pred             CC-ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECC
Confidence            44 7999999999999999999999999999999999998656776443332221 115888888 89999999998   


Q ss_pred             -Cccce
Q psy3619         167 -GVMCE  171 (418)
Q Consensus       167 -g~~C~  171 (418)
                       |..|+
T Consensus       123 dG~~C~  128 (142)
T 2c4f_L          123 DGVSCT  128 (142)
T ss_dssp             TSSCEE
T ss_pred             CCCCCC
Confidence             77887

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.26  E-value=1.3e-12  Score=104.63  Aligned_cols=78  Identities=36%  Similarity=0.745  Sum_probs=27.3

Q ss_pred             CCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCC-CcCCCCCCCCCCcceeecCCCCeeeecCCCCc---
Q psy3619          91 HCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADI-DECLSDPCSPEGTDKCLDLDNKFQCECNVGYT---  166 (418)
Q Consensus        91 ~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~-~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~---  166 (418)
                      .|. ++++|+.+||.++++|+++.++|+|.|++||+|..|+.++ ++|...+..+..  .|++..++|.|.|++||+   
T Consensus        38 ~c~-d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~  114 (134)
T 2vh0_B           38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD  114 (134)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred             cCC-CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence            565 7999999999999999999999999999999999998557 889765433333  499999999999999998   


Q ss_pred             -Cccce
Q psy3619         167 -GVMCE  171 (418)
Q Consensus       167 -g~~C~  171 (418)
                       |..|+
T Consensus       115 ~g~~C~  120 (134)
T 2vh0_B          115 NGKACI  120 (134)
T ss_dssp             TSSCEE
T ss_pred             CCCccC
Confidence             88887

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.26  E-value=9.4e-13  Score=111.33  Aligned_cols=68  Identities=26%  Similarity=0.700  Sum_probs=29.3

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCC-CCCCCCCCCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLI-DDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~-~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      .+|.++|+|+++.++|+|.|++||+|..|+.++ ++|...++.....|+++.++|.|.|++||+    |..|+
T Consensus        48 ~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           48 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             ---------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccc
Confidence            579999999999999999999999999998557 889875433334999999999999999999    88997

>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}

Probab=99.24  E-value=5e-11  Score=120.54  Aligned_cols=104  Identities=13%  Similarity=0.162  Sum_probs=74.3

Q ss_pred             ceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCee-----eccceecCCCcccC--CCccEEecccCCCCCC--CccC
Q psy3619         265 DAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLI-----AGKVENYGSGKSLP--QYGWVVLGKPRPDNIK--AYTE  335 (418)
Q Consensus       265 ~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~-----~~~~~~~~~~~~l~--~~~~l~iG~~~~~~~~--~~~~  335 (418)
                      .....+.+...++||+||+|.|.|.++.++|+||+..     ......++....|+  ....||||+.+.....  ....
T Consensus       271 ~~~~~l~s~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~~~~~~~~  350 (608)
T 2wjs_A          271 SGMTSVVSNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNV  350 (608)
T ss_dssp             SCEEEEEEEEECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCC
T ss_pred             CCcEEEEcCccccCCceEEEEEEEecceEEEEEeccccccccccccccCCccccccccCCCceEEeccCcccccCccccc
Confidence            3334556778899999999999999999999999732     22223344444565  4689999987654432  2234


Q ss_pred             CCceEEeeeEEecCeecChhhhh--hhcCCCCCCC
Q psy3619         336 AGFEGKLTKVQIWNRALDFTNEI--QKQVRDCRTE  368 (418)
Q Consensus       336 ~~F~GCi~~l~in~~~l~l~~~~--~~~~~~C~~~  368 (418)
                      .+|+|||++|+||++.++|....  ..+..+|...
T Consensus       351 ~~F~GCi~~v~in~~~~~l~~~~~~~~v~~gC~~~  385 (608)
T 2wjs_A          351 KKYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLE  385 (608)
T ss_dssp             CCCEEEEEEEEETTEEECGGGCSSCEEEEESCCCC
T ss_pred             CCceEEeeeEEECCEecCccccccccccccCCCcc
Confidence            78999999999999999997653  3345567654

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.22  E-value=1.1e-11  Score=96.28  Aligned_cols=91  Identities=29%  Similarity=0.712  Sum_probs=63.6

Q ss_pred             CCCcCCCCC--------CCCCCcceeecCCCCeeeecCCCCcCccceecC--CCCCCCCCCCCcEEEeCCCCeEEeCCCC
Q psy3619         133 DIDECLSDP--------CSPEGTDKCLDLDNKFQCECNVGYTGVMCETNI--DDCKSNPCLNGGICRDGVAKFTCDCPPG  202 (418)
Q Consensus       133 ~~~~C~~~~--------c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~--~~C~~~~C~~~~~C~~~~~~~~C~C~~G  202 (418)
                      |+++|..+|        |..++.  |++..++|+|.|++||+|..|+..+  ++|..++.....+|+++.++|+|.|++|
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~--C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G   82 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGT--CIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPG   82 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEE--ECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTT
T ss_pred             ecccccCCCccccccccCCCcCC--CCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCC
Confidence            678888888        766654  9999999999999999999998543  3677533222339999999999999999


Q ss_pred             cC----CCCcCcCCCCCcCCCCCCCCeEeec
Q psy3619         203 WT----GSRCEKDIGSCTNMPCQNDANCIDL  229 (418)
Q Consensus       203 ~~----G~~C~~~~~~C~~~~c~~~~~C~~~  229 (418)
                      |+    |..|+ +   ....||...+.++..
T Consensus        83 ~~~~~~g~~C~-~---~~~~pC~~~~~~i~~  109 (114)
T 1aut_L           83 YKLGDDLLQCH-P---AVKFPCGRPWKRMEK  109 (114)
T ss_dssp             EEECTTSSCEE-E---CSSSCTTCCC-----
T ss_pred             eeECCCCCccC-c---CcccCCCCCCccCCC
Confidence            98    45665 2   233578777766543

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.21  E-value=1.7e-12  Score=104.06  Aligned_cols=68  Identities=26%  Similarity=0.700  Sum_probs=29.0

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCC-CCCCCCCCCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLI-DDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~-~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      ++|.++|+|+++.++|+|.|++||+|..|+.++ ++|...+.....+|+++.++|+|.|++||+    |..|+
T Consensus        48 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           48 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             ---------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccC
Confidence            568999999999999999999999999998557 889875433334999999999999999999    88897

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.19  E-value=4.6e-12  Score=96.89  Aligned_cols=80  Identities=29%  Similarity=0.643  Sum_probs=36.9

Q ss_pred             cCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccC---CccccCCCcCCC-CCCCCCCcceeecCCCCee
Q psy3619          83 CDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVG---LQCEADIDECLS-DPCSPEGTDKCLDLDNKFQ  158 (418)
Q Consensus        83 C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g---~~C~~~~~~C~~-~~c~~~~~~~C~~~~~~~~  158 (418)
                      ...||.|+.|  ++++|...+....++|+++.++|+|.|++||+|   ..|+ ++++|.. ++|.  +  .|+++.++|.
T Consensus        18 ~~~~~~~~~C--d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~--~C~n~~gsy~   90 (107)
T 2w2n_E           18 TENLYFQGAM--GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--Q--LCVNLEGGYK   90 (107)
T ss_dssp             --CCCCSCCB--SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C--------------------------
T ss_pred             cCCCcCCCCC--cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--C--eeecCCCCEE
Confidence            4567888898  488998653233468999999999999999997   7887 8999974 5664  3  4999999999


Q ss_pred             eecCCCCcCcc
Q psy3619         159 CECNVGYTGVM  169 (418)
Q Consensus       159 C~C~~G~~g~~  169 (418)
                      |.|++||++..
T Consensus        91 C~C~~Gy~~~~  101 (107)
T 2w2n_E           91 CQCEEGFQLDP  101 (107)
T ss_dssp             -----------
T ss_pred             EECCCCceECC
Confidence            99999998653

>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}

Probab=99.10  E-value=3e-10  Score=114.89  Aligned_cols=113  Identities=14%  Similarity=0.068  Sum_probs=73.4

Q ss_pred             ceEEecccCcEEEeccCccceEEeeec-cccccCCCceEEEEEEeCCEEEEEEcCeeec---------cceecCCCcccC
Q psy3619         246 PLIQAHSSGVQVSLFPELQDAFLAFHE-YATINDGQWHHVAIVWTQGTLTLITEGLIAG---------KVENYGSGKSLP  315 (418)
Q Consensus       246 ~~~~~~~~~v~l~~~~~~~~~~~~~~s-~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~---------~~~~~~~~~~l~  315 (418)
                      .++.+.-....+.+...++.....+.. ...++||+||+|.|.|.++.++|+||+....         ...+++....|+
T Consensus        58 dfl~l~L~~G~l~~~~~~G~g~~~l~~~~~~~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~  137 (608)
T 2wjs_A           58 DFLAIEMRKGKVSFLWDVGSGVGRVEYPDLTIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILD  137 (608)
T ss_dssp             CEEEEEEETTEEEEEEESSSCEEEEECCSCCCTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCC
T ss_pred             cEEEEEEECCEEEEEEECCCCceEEeeCCccccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeec
Confidence            344443333334444444444444443 5689999999999999999999999986532         123345545566


Q ss_pred             CC--ccEEecccCCCCCC--CccCCCceEEeeeEEecCeecChhhhh
Q psy3619         316 QY--GWVVLGKPRPDNIK--AYTEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       316 ~~--~~l~iG~~~~~~~~--~~~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      +.  ..||||+.+.....  .....+|+|||++|.||++.++|.+..
T Consensus       138 l~~~~~l~vGG~p~~~~~~~~~~~~~F~GCi~~l~in~~~i~l~~~~  184 (608)
T 2wjs_A          138 VDANAMLFVGGLTGKIKKADAVRVITFTGCMGETYFDNKPIGLWNFR  184 (608)
T ss_dssp             CCSSCEEEESSCCTTSCCCTTCCCCCCCEEECCCEESSSBC----CC
T ss_pred             cCCCCcEEeCCcCccccCCcccccCCccEEEEEEEECCEEccccccc
Confidence            54  67999987654322  222478999999999999999986654

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.08  E-value=3.5e-11  Score=91.95  Aligned_cols=79  Identities=24%  Similarity=0.596  Sum_probs=34.9

Q ss_pred             CCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeeecCCCCcC---ccceecCCCCCC-CCCCCCcEEEeCCCCeE
Q psy3619         121 CRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTG---VMCETNIDDCKS-NPCLNGGICRDGVAKFT  196 (418)
Q Consensus       121 C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g---~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~  196 (418)
                      ...||++..|  ++++|..++..+..  .|++..++|.|.|++||+|   ..|+ ++++|.. ++|.  ++|+++.++|.
T Consensus        18 ~~~~~~~~~C--d~neC~~~~~~C~~--~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~   90 (107)
T 2w2n_E           18 TENLYFQGAM--GTNECLDNNGGCSY--VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYK   90 (107)
T ss_dssp             --CCCCSCCB--SCCGGGTGGGGCSS--EEECCSBSCEEECCTTCEEETTTEEE-C------------------------
T ss_pred             cCCCcCCCCC--cCccCcCCCCCCCC--EeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEE
Confidence            4567888888  67888764322232  4888889999999999987   7887 8888874 6775  68999889999


Q ss_pred             EeCCCCcCCC
Q psy3619         197 CDCPPGWTGS  206 (418)
Q Consensus       197 C~C~~G~~G~  206 (418)
                      |.|++||++.
T Consensus        91 C~C~~Gy~~~  100 (107)
T 2w2n_E           91 CQCEEGFQLD  100 (107)
T ss_dssp             ----------
T ss_pred             EECCCCceEC
Confidence            9999998764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.03  E-value=3.9e-09  Score=108.22  Aligned_cols=161  Identities=24%  Similarity=0.628  Sum_probs=111.4

Q ss_pred             ceEeeCCCCeEE----ecCCCCccCCCccCCCCCCCC--CCCCCCeeecCCCCeeee----CCCCccCCccccCCCcCC-
Q psy3619          70 GTCTDLVGGFSC----SCDLGFTGKHCQHLIDDCASE--PCQNGGSCVDMLDGFMCQ----CRPGFVGLQCEADIDECL-  138 (418)
Q Consensus        70 ~~C~~~~g~~~C----~C~~G~~g~~C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~----C~~G~~g~~C~~~~~~C~-  138 (418)
                      +.|+..  +++|    .|..|.-...|.  ..+|...  .|. ++.|++  .++.|-    |..|.-...|. .+..|. 
T Consensus       186 g~Ci~~--~~~CDg~~dC~dgsDE~~C~--~~~C~~~~f~C~-~g~Ci~--~~~~Cdg~~dC~dgsde~~C~-~~~~C~~  257 (699)
T 1n7d_A          186 GECIHS--SWRCDGGPDCKDKSDEENCA--VATCRPDEFQCS-DGNCIH--GSRQCDREYDCKDMSDEVGCV-NVTLCEG  257 (699)
T ss_dssp             SCCCST--TCTTSSSCCSTTSCSSCSCC--CCCCCSSEEESS-SSCEEE--TTCCSSSCCCSSSSCSSSSTT-CCCCCCS
T ss_pred             CceEec--hhccCCCCCCCCCcccccCC--CcccCCCcEecC-CCceee--eecccCCCCCCCCCCccCCCC-CCCcccC
Confidence            467653  5667    677877766775  4566543  365 467887  467785    88888777786 455662 


Q ss_pred             C--CCCCCCCcceeecCCC--CeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcC---CCCcCcC
Q psy3619         139 S--DPCSPEGTDKCLDLDN--KFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWT---GSRCEKD  211 (418)
Q Consensus       139 ~--~~c~~~~~~~C~~~~~--~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~---G~~C~~~  211 (418)
                      .  ..|..   +.|++...  .+.+.|+.|+.+...+.++++|..++....+.|.++.++|.|.|++||+   |..|+ +
T Consensus       258 ~~~~~C~~---g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-d  333 (699)
T 1n7d_A          258 PNKFKCHS---GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-D  333 (699)
T ss_dssp             TTCCCCTT---SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-C
T ss_pred             CCceecCC---CcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-C
Confidence            2  23433   23665432  3466788887665333356777654322346899999999999999998   78898 8


Q ss_pred             CCCCc-CCCCCCCCeEeecCCCeEEEeCCCCCCC
Q psy3619         212 IGSCT-NMPCQNDANCIDLFQDFFCVSSHSVQGR  244 (418)
Q Consensus       212 ~~~C~-~~~c~~~~~C~~~~~~~~c~c~~~~~~~  244 (418)
                      ++||. ..+|.  +.|+|+.++|.|.|++||.+.
T Consensus       334 ideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          334 IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             CCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred             ccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence            99997 45674  589999999999999999864

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.02  E-value=3.7e-10  Score=104.73  Aligned_cols=70  Identities=37%  Similarity=0.875  Sum_probs=59.2

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCC---CCCCCCCcceeecCCCCeeeecCCCCcCc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLS---DPCSPEGTDKCLDLDNKFQCECNVGYTGV  168 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~---~~c~~~~~~~C~~~~~~~~C~C~~G~~g~  168 (418)
                      |+++|..+||.++++|+++.++|+|.|++||+|..|+.++++|..   ++|..    .|++..++|.|.|++||+|.
T Consensus         4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~----~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH----FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS----EEECCSSSCEEECCTTEECC
T ss_pred             cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC----ccccCCCeeEEecccccccc
Confidence            678899999999999999888999999999999999888999976   56654    49999999999999999864

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.01  E-value=2.9e-10  Score=105.43  Aligned_cols=63  Identities=25%  Similarity=0.758  Sum_probs=58.3

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCCCccCCCCCCC---CCCCCCCeeecCCCCeeeeCCCCccCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCAS---EPCQNGGSCVDMLDGFMCQCRPGFVGL  128 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~g~  128 (418)
                      ++|.++++|++..++|+|.|++||+|+.|+.++++|..   .+|.+  .|+++.++|.|.|++||+|.
T Consensus        11 ~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B           11 QPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             CCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred             CCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence            57999999999999999999999999999889999987   67876  99999999999999999863

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.99  E-value=3.9e-10  Score=111.65  Aligned_cols=161  Identities=22%  Similarity=0.371  Sum_probs=69.2

Q ss_pred             CeEEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCcc--CCccccCCCcCCCCCCCCCCcceeecCCC
Q psy3619          78 GFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV--GLQCEADIDECLSDPCSPEGTDKCLDLDN  155 (418)
Q Consensus        78 ~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~--g~~C~~~~~~C~~~~c~~~~~~~C~~~~~  155 (418)
                      +.-+.|..||.|..|+.-.+.....++...   ........|.|...+.  +..|....+ ......  .....|.....
T Consensus       343 g~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~---~~~~~~~~C~C~~~~~~~~~~C~~~~~-~~~~~~--~~~C~C~~g~~  416 (525)
T 4aqs_A          343 GVCDNCQHNTMGRNCEQCKPFYFQHPERDI---RDPNLCEPCTCDPAGSENGGICDGYTD-FSVGLI--AGQCRCKLHVE  416 (525)
T ss_dssp             EEEESCCTTEESTTSCEECTTEEECSSSCT---TCTTCEEECCCCTTTBSGGGCCCCSCB-GGGTBC--SSCCCBCTTEE
T ss_pred             CcccCCCCCCCCCCcccccCcccccCCCCC---CCCCCCcCCCCCCCCCCCCccccCCCC-CCcCCC--CCccCCCCCCC
Confidence            333479999999988632221111111110   0111223455655443  444431111 111111  11222555545


Q ss_pred             Ceee-ecCCCCcCccceecCCCCCCCCCCCCcEEEeC----CCCeEEeCCCCcCCCCcCc----------CCCCCcCCCC
Q psy3619         156 KFQC-ECNVGYTGVMCETNIDDCKSNPCLNGGICRDG----VAKFTCDCPPGWTGSRCEK----------DIGSCTNMPC  220 (418)
Q Consensus       156 ~~~C-~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~----~~~~~C~C~~G~~G~~C~~----------~~~~C~~~~c  220 (418)
                      ++.| .|.+||.|..|+ ....|...+|.+.++|.+.    ..++.|.|++||+|..|++          +++.|...+|
T Consensus       417 G~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C  495 (525)
T 4aqs_A          417 GERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDC  495 (525)
T ss_dssp             TTTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------------------
T ss_pred             CCcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCC
Confidence            5667 799999998886 5566777677776666532    2346799999999999973          4567887788


Q ss_pred             CCCCeEeec--CCCeEEEeCCCCCCCc
Q psy3619         221 QNDANCIDL--FQDFFCVSSHSVQGRR  245 (418)
Q Consensus       221 ~~~~~C~~~--~~~~~c~c~~~~~~~~  245 (418)
                      .+++.+...  ...+.|.|++||.|..
T Consensus       496 ~~~gs~~~~C~~~tG~C~C~~G~~G~~  522 (525)
T 4aqs_A          496 DLGGALNNSCSEDSGQCSCLPHMIGRQ  522 (525)
T ss_dssp             ---------------------------
T ss_pred             CCCCccCCccCCCCCeeECCCCCcCCC
Confidence            887776554  2345799999999864

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.98  E-value=3.3e-10  Score=97.62  Aligned_cols=97  Identities=30%  Similarity=0.648  Sum_probs=58.1

Q ss_pred             CCCCCCCceEeeCCCCeEEecCCCCccCCCccCCC---------CCC----CCCCCCCCeeecCCCCeeeeCCCC-----
Q psy3619          63 TPNDSIPGTCTDLVGGFSCSCDLGFTGKHCQHLID---------DCA----SEPCQNGGSCVDMLDGFMCQCRPG-----  124 (418)
Q Consensus        63 ~~~c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~---------~C~----~~~C~~~~~C~~~~g~~~C~C~~G-----  124 (418)
                      ...|+++|.|+.    ..|.|++||+|..|+.+.+         .|.    ..+|.++++|+.    ..|.|.+|     
T Consensus        95 ~~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~  166 (217)
T 2p28_B           95 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGK  166 (217)
T ss_dssp             -CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTC
T ss_pred             CCccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcc
Confidence            357999999984    4799999999999974432         243    245666666663    25777776     


Q ss_pred             -ccCCccccCCCcCCCC---CCCCCCcceeecCCCCeeeecCCCCcCccce
Q psy3619         125 -FVGLQCEADIDECLSD---PCSPEGTDKCLDLDNKFQCECNVGYTGVMCE  171 (418)
Q Consensus       125 -~~g~~C~~~~~~C~~~---~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~  171 (418)
                       |+|..|+.+++.|...   +|..+..+.|..    ..|.|.+||+|..|+
T Consensus       167 ~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~  213 (217)
T 2p28_B          167 LIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ  213 (217)
T ss_dssp             CEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred             cEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence             4666665444555432   344331123543    155555555555554

>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A

Probab=98.94  E-value=1.4e-08  Score=88.21  Aligned_cols=123  Identities=26%  Similarity=0.522  Sum_probs=91.2

Q ss_pred             eccccccCCCceEEEEEEeC--CEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCcc-CCCceEEeeeEEe
Q psy3619         271 HEYATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT-EAGFEGKLTKVQI  347 (418)
Q Consensus       271 ~s~~~l~dg~WH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~-~~~F~GCi~~l~i  347 (418)
                      .....+.+|+||||.++|+.  +.++|+||+....+.........+...+.|.||+.++.....+. ...|.|-|.+|+|
T Consensus        89 ~~~~~~~~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~gg~f~~~~~f~G~i~~v~i  168 (217)
T 3flp_A           89 SCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIGGGFEEQESWSGELSDLQV  168 (217)
T ss_dssp             EEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTTBCCCGGGCCCEEEEEEEE
T ss_pred             EcccccCCCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCCCccCCCCceEEEEeeEEE
Confidence            33456899999999999994  68999999987765433444555677889999998776555543 3689999999999


Q ss_pred             cCeecChhhhhhhcCCCCCCCCccCCceEEeeCCcc-cccCceeeecCCCC
Q psy3619         348 WNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGVERVVPSHC  397 (418)
Q Consensus       348 n~~~l~l~~~~~~~~~~C~~~pc~~~g~c~~~~~~~-~~~g~~~~~~~~~c  397 (418)
                      |++.|...+.. ... .|..  ....|..+.|.... .++|.+.......|
T Consensus       169 w~~aLs~~eI~-~l~-~c~~--~~~~Gnv~~W~~~~~~~~g~v~~~~~~~c  215 (217)
T 3flp_A          169 WDEALTTHQVS-TVA-SCNG--IRPRGNVISWMEDSFVADDGVIVGISHMC  215 (217)
T ss_dssp             ESSCCCHHHHH-HHH-CTTS--CCCCCSSEETTTSCEEEESSEEEEECCSS
T ss_pred             ECccCCHHHHH-HHH-hCCC--CCCCCCEEccccCeEEecCcEEEccCCcc
Confidence            99999965443 332 2542  33568888999887 67888877766544

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.91  E-value=1.1e-09  Score=71.81  Aligned_cols=47  Identities=28%  Similarity=0.703  Sum_probs=37.3

Q ss_pred             CccceecCCCCCCCCCCCCcEEE-----eCCCCeEEeCCCCcCCCCcCcCCC
Q psy3619         167 GVMCETNIDDCKSNPCLNGGICR-----DGVAKFTCDCPPGWTGSRCEKDIG  213 (418)
Q Consensus       167 g~~C~~~~~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~~G~~C~~~~~  213 (418)
                      |..|+.++++|..+||.|+|+|.     +..++|.|.|++||+|.+|+..+.
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~   52 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM   52 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence            56788889999999999999994     567789999999999999986654

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.89  E-value=8.8e-10  Score=72.18  Aligned_cols=47  Identities=23%  Similarity=0.577  Sum_probs=37.3

Q ss_pred             cCCCccCCCCCCCCCCCCCCee-----ecCCCCeeeeCCCCccCCccccCCC
Q psy3619          89 GKHCQHLIDDCASEPCQNGGSC-----VDMLDGFMCQCRPGFVGLQCEADID  135 (418)
Q Consensus        89 g~~C~~~~~~C~~~~C~~~~~C-----~~~~g~~~C~C~~G~~g~~C~~~~~  135 (418)
                      |.+|+.++++|+.+||.++++|     ++..++|+|.|++||+|.+|+..+.
T Consensus         1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~   52 (55)
T 3u7u_G            1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM   52 (55)
T ss_dssp             --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred             CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence            5678778999999999999999     4566789999999999999986553

>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*

Probab=98.87  E-value=2.9e-09  Score=102.60  Aligned_cols=83  Identities=18%  Similarity=0.160  Sum_probs=57.3

Q ss_pred             cccccCCCceEE--EEEEeCCEEEEEEcCeeeccceec----CC----CcccCCCccEEecccCCCCCCCc-cCCCceEE
Q psy3619         273 YATINDGQWHHV--AIVWTQGTLTLITEGLIAGKVENY----GS----GKSLPQYGWVVLGKPRPDNIKAY-TEAGFEGK  341 (418)
Q Consensus       273 ~~~l~dg~WH~v--~v~~~~~~~~l~vD~~~~~~~~~~----~~----~~~l~~~~~l~iG~~~~~~~~~~-~~~~F~GC  341 (418)
                      ..+++||+||+|  .|.|.++.  |.||+.........    +.    ...++..+.||||+.+....... ...+|+||
T Consensus       310 ~~~l~DG~WH~V~~~l~~~~~~--L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lyiGG~p~~~~~~~~~~~~F~GC  387 (422)
T 1h30_A          310 EIKVCDGQEHVVTVSLRDGEAT--LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGC  387 (422)
T ss_dssp             ECCTTSSCCEEEEEEEETTEEE--EEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEE
T ss_pred             eecccCCCEeEeEEEEEEeccE--EEEeCCccceeechhhcccchhhhhhhhccCCceEEcccCCCCccccCccCCcccc
Confidence            478999999999  77776544  89998655433111    11    11256778999988765432222 23679999


Q ss_pred             eeeEEecCeecChhhhh
Q psy3619         342 LTKVQIWNRALDFTNEI  358 (418)
Q Consensus       342 i~~l~in~~~l~l~~~~  358 (418)
                      | +|+||++.++|.+..
T Consensus       388 i-~l~ing~~ldl~~a~  403 (422)
T 1h30_A          388 M-TLEVNRRLLDLDEAA  403 (422)
T ss_dssp             E-EEEETTEECCGGGSS
T ss_pred             E-EEEECCEEecHHHHH
Confidence            9 699999999997643

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.86  E-value=8.7e-09  Score=105.63  Aligned_cols=130  Identities=25%  Similarity=0.599  Sum_probs=96.3

Q ss_pred             CCCCceEeeCCCCeEEe----cCCCCccCCCccCCCCCC---CCCCCCCCeeecCCC--CeeeeCCCCccCCccccCCCc
Q psy3619          66 DSIPGTCTDLVGGFSCS----CDLGFTGKHCQHLIDDCA---SEPCQNGGSCVDMLD--GFMCQCRPGFVGLQCEADIDE  136 (418)
Q Consensus        66 c~~~~~C~~~~g~~~C~----C~~G~~g~~C~~~~~~C~---~~~C~~~~~C~~~~g--~~~C~C~~G~~g~~C~~~~~~  136 (418)
                      |. ++.|++  +++.|.    |..|.-...|. .+..|.   ..+|.+ +.|++...  .+.+.|+.|+.+....-++++
T Consensus       222 C~-~g~Ci~--~~~~Cdg~~dC~dgsde~~C~-~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~e  296 (699)
T 1n7d_A          222 CS-DGNCIH--GSRQCDREYDCKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNE  296 (699)
T ss_dssp             SS-SSCEEE--TTCCSSSCCCSSSSCSSSSTT-CCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCC
T ss_pred             cC-CCceee--eecccCCCCCCCCCCccCCCC-CCCcccCCCceecCC-CcEeCCcccccccceecCccccccccccccc
Confidence            44 467887  467785    88888888887 466773   234655 67876432  245678888775543336788


Q ss_pred             CCCCCCCCCCcceeecCCCCeeeecCCCCc---CccceecCCCCC-CCCCCCCcEEEeCCCCeEEeCCCCcCC
Q psy3619         137 CLSDPCSPEGTDKCLDLDNKFQCECNVGYT---GVMCETNIDDCK-SNPCLNGGICRDGVAKFTCDCPPGWTG  205 (418)
Q Consensus       137 C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~---g~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~G  205 (418)
                      |..++..+..  .|++..++|.|.|++||.   |..|+ ++++|. ..+|.  +.|+++.++|.|.|++||++
T Consensus       297 C~~~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          297 CLDNNGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             TTSSTTTSCT--TCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred             ccccccCcCC--CcccCCCCcEEeCCCCeEcCCCCccc-CccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence            8765433333  499999999999999998   77898 899997 46775  58999999999999999984

>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*

Probab=98.85  E-value=3.3e-08  Score=84.86  Aligned_cols=112  Identities=17%  Similarity=0.267  Sum_probs=84.5

Q ss_pred             ccccCCCceEEEEEEe--CCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccC-CCceEEeeeEEecCe
Q psy3619         274 ATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTE-AGFEGKLTKVQIWNR  350 (418)
Q Consensus       274 ~~l~dg~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~-~~F~GCi~~l~in~~  350 (418)
                      ..+.+|+||||.++|+  .+.+.|+||+....+ ........+...+.|.||+.++.....+.. ..|.|-|.+|+||++
T Consensus        84 ~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~-~~~~~g~~i~~~g~l~lGq~qd~~gg~f~~~~~f~G~i~~v~iW~~  162 (204)
T 3kqr_A           84 VIEKFPAPVHICVSWESSSGIAEFWINGTPLVK-KGLRQGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMWDS  162 (204)
T ss_dssp             CCCCSSCCEEEEEEEETTTCEEEEEETTEECCC-EECCTTCCBCSSCEEEESSCCSSSSCCCCGGGCCCEEEEEEEEESS
T ss_pred             cccCCCceEEEEEEEECCCCeEEEEECCEEeee-eccCCCCEECCCcEEEEcccccCCCCCcCcccceeEEEeeEEEECc
Confidence            4689999999999999  468999999987664 234444556778899999998877666653 789999999999999


Q ss_pred             ecChhhhhhhcCCCCCCCCccCCceEEeeCCcc-cccCceeee
Q psy3619         351 ALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGVERV  392 (418)
Q Consensus       351 ~l~l~~~~~~~~~~C~~~pc~~~g~c~~~~~~~-~~~g~~~~~  392 (418)
                      +|...+. ......|.     ..|..+.|.... .++|.+...
T Consensus       163 aLs~~eI-~~l~~~~~-----~~Gnv~~W~~~~~~~~G~v~~~  199 (204)
T 3kqr_A          163 VLPPENI-LSAYQGTP-----LPANILDWQALNYEIRGYVIIK  199 (204)
T ss_dssp             CCCHHHH-HHHHHTCC-----CCCSSEETTSCEEEEESSCEEE
T ss_pred             cCCHHHH-HHHHhCCC-----CCCCEEecccCEEEeeeeEEEe
Confidence            9997544 33333331     247888998886 667776554

>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A

Probab=98.81  E-value=4.3e-08  Score=84.33  Aligned_cols=112  Identities=14%  Similarity=0.260  Sum_probs=83.3

Q ss_pred             ccccCCCceEEEEEEe--CCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCcc-CCCceEEeeeEEecCe
Q psy3619         274 ATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT-EAGFEGKLTKVQIWNR  350 (418)
Q Consensus       274 ~~l~dg~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~-~~~F~GCi~~l~in~~  350 (418)
                      ..+.+|+||||.++|+  .+.+.|+||+..... ........+...+.|.||+.++.....+. ...|.|-|.+|+||++
T Consensus        86 ~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~-~~~~~g~~i~~~g~l~lGq~qd~~gg~f~~~~~f~G~i~~v~iw~~  164 (206)
T 3pvn_A           86 VPEVTVAPVHICTSWESASGIVEFWVDGKPRVR-KSLKKGYTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDF  164 (206)
T ss_dssp             CSSCCSSCEEEEEEEETTTCEEEEEETTEECCC-EECCTTCCBCSSCEEEESSCCSBTTBCCCGGGCCCEEEEEEEEESS
T ss_pred             ccCCCCceEEEEEEEECCCCeEEEEECCEEccc-ccccCCcEECCCCEEEEccccccCCCCcCCccceEEEEeeEEEECc
Confidence            4678999999999999  468999999987664 23444455677889999988877666654 3789999999999999


Q ss_pred             ecChhhhhhhcCCCCCCCCccCCceEEeeCCcc-cccCceeee
Q psy3619         351 ALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGVERV  392 (418)
Q Consensus       351 ~l~l~~~~~~~~~~C~~~pc~~~g~c~~~~~~~-~~~g~~~~~  392 (418)
                      +|...+. ......|  .   ..|..+.|.... .++|.+...
T Consensus       165 aLs~~eI-~~~~~~~--~---~~Gnv~~W~~~~~~~~G~v~~~  201 (206)
T 3pvn_A          165 VLSPDEI-NTIYLGG--P---FSPNVLNWRALKYEVQGEVFTK  201 (206)
T ss_dssp             CCCHHHH-HHHHHCC--C---CCCSSBCTTSBCEEEESSCEEE
T ss_pred             cCCHHHH-HHHHhCC--C---CCCCEecchhCEEEeeeeEEee
Confidence            9996543 3333333  1   257888998876 667765543

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.81  E-value=4.8e-09  Score=86.59  Aligned_cols=29  Identities=24%  Similarity=0.541  Sum_probs=24.7

Q ss_pred             CCCCCceEeeCC--CCeEE-ecCCCCccCCCc
Q psy3619          65 NDSIPGTCTDLV--GGFSC-SCDLGFTGKHCQ   93 (418)
Q Consensus        65 ~c~~~~~C~~~~--g~~~C-~C~~G~~g~~C~   93 (418)
                      +|.++++|....  +.++| .|++||+|..|+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE   33 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence            477889999765  67899 799999999997

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.81  E-value=3e-09  Score=91.64  Aligned_cols=95  Identities=34%  Similarity=0.811  Sum_probs=73.3

Q ss_pred             CCCCCCCeeecCCCCeeeeCCCCccCCccccCCC---------cCC----CCCCCCCCcceeecCCCCeeeecCCC----
Q psy3619         102 EPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID---------ECL----SDPCSPEGTDKCLDLDNKFQCECNVG----  164 (418)
Q Consensus       102 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~---------~C~----~~~c~~~~~~~C~~~~~~~~C~C~~G----  164 (418)
                      ..|..+++|+.    ..|.|.+||+|..|+.+.+         .|.    ..+|..++  .|+.    ..|.|.+|    
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G--~C~~----g~C~C~~gw~~~  165 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLG--DCVC----GQCLCHTSDVPG  165 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTE--EEET----TEEEECCCCSTT
T ss_pred             CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCC--EEeC----CceECCCCCCCc
Confidence            45889999985    5899999999999985443         354    23454444  4874    38999999    


Q ss_pred             --CcCccceecCCCCCCC---CCCCC--cEEEeCCCCeEEeCCCCcCCCCcCc
Q psy3619         165 --YTGVMCETNIDDCKSN---PCLNG--GICRDGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       165 --~~g~~C~~~~~~C~~~---~C~~~--~~C~~~~~~~~C~C~~G~~G~~C~~  210 (418)
                        |+|..|+.+...|..+   +|.++  |+|...    .|.|.+||+|..|+.
T Consensus       166 ~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~g----~C~C~~G~~G~~C~~  214 (217)
T 2p28_B          166 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQH  214 (217)
T ss_dssp             CCEESTTSCEESSCSCEETTEETTCTTTEEEETT----EEEECTTEESTTSCE
T ss_pred             ccEECCCcccCCccCCCCCCCCCCCCCCcEEeCC----eeECCCCCccCCcCC
Confidence              6999998777788764   68887  999852    799999999999974

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.78  E-value=1.6e-08  Score=104.42  Aligned_cols=118  Identities=24%  Similarity=0.528  Sum_probs=69.1

Q ss_pred             CCCCccCCccccCCCcCC---CCCCCCCCcceeecCCC--CeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCe
Q psy3619         121 CRPGFVGLQCEADIDECL---SDPCSPEGTDKCLDLDN--KFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKF  195 (418)
Q Consensus       121 C~~G~~g~~C~~~~~~C~---~~~c~~~~~~~C~~~~~--~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~  195 (418)
                      |..|.-+..|. .+++|.   ..+|..   +.|++...  ...+.|..|+.....+-.+++|..+.....+.|+++.++|
T Consensus       258 C~dgsDE~~C~-~~~~C~~~~~~~C~~---G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y  333 (791)
T 3m0c_C          258 CKDMSDEVGCV-NVTLCEGPNKFKCHS---GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGY  333 (791)
T ss_dssp             ----------------CCSTTCCCCTT---SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSE
T ss_pred             cccccccCccc-ccccccCCCccccCC---CcccccccccCCccccccccCccccccccccccccccCccccccCCCCCc
Confidence            45555455554 334442   123432   23654432  2355777776554322134555543323345999999999


Q ss_pred             EEeCCCCcC---CCCcCcCCCCCcCCCCCCCCeEeecCCCeEEEeCCCCCCC
Q psy3619         196 TCDCPPGWT---GSRCEKDIGSCTNMPCQNDANCIDLFQDFFCVSSHSVQGR  244 (418)
Q Consensus       196 ~C~C~~G~~---G~~C~~~~~~C~~~~c~~~~~C~~~~~~~~c~c~~~~~~~  244 (418)
                      .|.|++||.   |..|+ +++||. .+....+.|+|+.++|+|.|.+||...
T Consensus       334 ~C~C~~Gy~l~~g~~C~-dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~  383 (791)
T 3m0c_C          334 ECLCPDGFQLVAQRRCE-DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLD  383 (791)
T ss_dssp             EEECCTTCEEETTTEEE-CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECC
T ss_pred             ccCCCCCCccCCCCccc-cCcccC-CCCCCCCeeecCCCCceeecCCCCEeC
Confidence            999999995   88998 999998 333445699999999999999999753

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.75  E-value=8.5e-09  Score=106.48  Aligned_cols=136  Identities=26%  Similarity=0.623  Sum_probs=76.9

Q ss_pred             ceEeeCCCCeEE----ecCCCCccCCCccCCCCCC---CCCCCCCCeeecCCC--CeeeeCCCCccCCccccCCCcCCCC
Q psy3619          70 GTCTDLVGGFSC----SCDLGFTGKHCQHLIDDCA---SEPCQNGGSCVDMLD--GFMCQCRPGFVGLQCEADIDECLSD  140 (418)
Q Consensus        70 ~~C~~~~g~~~C----~C~~G~~g~~C~~~~~~C~---~~~C~~~~~C~~~~g--~~~C~C~~G~~g~~C~~~~~~C~~~  140 (418)
                      +.|++  +++.|    .|..|.-+..|. .+++|.   ..+|.+ +.|++...  ...+.|..|+.....+-++++|..+
T Consensus       243 g~Ci~--~~~~Cdg~~dC~dgsDE~~C~-~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~  318 (791)
T 3m0c_C          243 GNCIH--GSRQCDREYDCKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDN  318 (791)
T ss_dssp             ---------------------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTG
T ss_pred             CceEe--cceecCChhccccccccCccc-ccccccCCCccccCC-CcccccccccCCccccccccCcccccccccccccc
Confidence            46664  34566    577887777886 466674   235765 67876533  2456788887654322246677654


Q ss_pred             CCCCCCcceeecCCCCeeeecCCCCc---CccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcC----CCCcCcCCC
Q psy3619         141 PCSPEGTDKCLDLDNKFQCECNVGYT---GVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWT----GSRCEKDIG  213 (418)
Q Consensus       141 ~c~~~~~~~C~~~~~~~~C~C~~G~~---g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~----G~~C~~~~~  213 (418)
                      ...+..  .|+++.++|.|.|++||.   |..|+ ++++|. .+....+.|+++.++|.|.|++||.    +..|. +++
T Consensus       319 ~~~C~~--~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~-~~~  393 (791)
T 3m0c_C          319 NGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK-AVG  393 (791)
T ss_dssp             GGGCSS--EEEECSBSEEEECCTTCEEETTTEEE-CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCE-ETT
T ss_pred             ccCccc--cccCCCCCcccCCCCCCccCCCCccc-cCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceee-ecc
Confidence            433333  599999999999999995   88998 899997 2333346899999999999999996    44564 344


Q ss_pred             C
Q psy3619         214 S  214 (418)
Q Consensus       214 ~  214 (418)
                      +
T Consensus       394 ~  394 (791)
T 3m0c_C          394 S  394 (791)
T ss_dssp             S
T ss_pred             c
Confidence            3

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.70  E-value=7.2e-09  Score=102.59  Aligned_cols=37  Identities=27%  Similarity=0.712  Sum_probs=0.0

Q ss_pred             cCCCCCCCCCCCCcEEEeC--CCCeEEeCCCCcCCCCcC
Q psy3619         173 NIDDCKSNPCLNGGICRDG--VAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~~~--~~~~~C~C~~G~~G~~C~  209 (418)
                      +++.|...+|.+++.+...  ..++.|.|++||+|.+|+
T Consensus       486 ~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          486 DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             ---------------------------------------
T ss_pred             CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence            3456777778777766543  223479999999999987

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.69  E-value=1e-08  Score=98.16  Aligned_cols=62  Identities=35%  Similarity=0.871  Sum_probs=53.6

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCc---cCCCccCCCCCCC-CCCCCCCeeecCCCCeeeeCCCCccCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFT---GKHCQHLIDDCAS-EPCQNGGSCVDMLDGFMCQCRPGFVGL  128 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~---g~~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~g~  128 (418)
                      .+|.+.+.|+++.++|+|.|++||+   |..|+ ++|||.. .+|..  .|+|+.|+|.|.|.+||++.
T Consensus         6 ~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L            6 NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             TGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred             CCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence            3456668999999999999999999   88997 8999973 56754  99999999999999999853

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.66  E-value=1.7e-08  Score=61.68  Aligned_cols=37  Identities=49%  Similarity=1.044  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      ++++|..+||.++++|+++.++|+|.|++||+|..|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            6788998999999999998889999999999998885

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.65  E-value=1.7e-08  Score=96.52  Aligned_cols=67  Identities=34%  Similarity=0.868  Sum_probs=58.5

Q ss_pred             CCCCCCCCCCCCeeecCCCCeeeeCCCCcc---CCccccCCCcCCC-CCCCCCCcceeecCCCCeeeecCCCCcCc
Q psy3619          97 DDCASEPCQNGGSCVDMLDGFMCQCRPGFV---GLQCEADIDECLS-DPCSPEGTDKCLDLDNKFQCECNVGYTGV  168 (418)
Q Consensus        97 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~---g~~C~~~~~~C~~-~~c~~~~~~~C~~~~~~~~C~C~~G~~g~  168 (418)
                      |||..++|.+.+.|++++++|.|.|++||+   |..|+ +++||.. .+|..    .|+++.++|.|.|.+||.+.
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~----~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ----LCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS----CCBCCSSSCBCCCCTTCCCC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC----ccCCCccceeeecccccccc
Confidence            578888888889999999999999999998   88997 9999973 55643    49999999999999999865

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.65  E-value=4.7e-09  Score=100.04  Aligned_cols=64  Identities=28%  Similarity=0.839  Sum_probs=18.8

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCc----cCCCccCCCCCC-CCCCCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFT----GKHCQHLIDDCA-SEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      ++.+.+.|.+..|+|+|.|++||+    |..|+ ++++|. ..+|.+  .|+++.|+|.|.|++||+    |..|.
T Consensus        10 ~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           10 NGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             -------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccC--cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence            444556899999999999999999    88996 999997 567875  499999999999999998    77776

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.61  E-value=6.8e-09  Score=98.92  Aligned_cols=72  Identities=28%  Similarity=0.738  Sum_probs=17.8

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCcc----CCccccCCCcCC-CCCCCCCCcceeecCCCCeeeecCCCCc---
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDECL-SDPCSPEGTDKCLDLDNKFQCECNVGYT---  166 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C~-~~~c~~~~~~~C~~~~~~~~C~C~~G~~---  166 (418)
                      ++|+|..+++.+.+.|.+..|+|+|.|++||+    |..|+ +++||. ..+|..    .|+++.++|.|.|++||.   
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~----~C~~~~g~~~C~C~~g~~l~~   76 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ----GCTNSEGAFQCWCEAGYELRP   76 (386)
T ss_dssp             ---------------------------------------------------CCTT----EEC-----CCEECCTTEEECT
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccC----cCCCCCCCCeEEECCCceEcC
Confidence            68999988877777999999999999999998    89995 999996 466653    399999999999999998   


Q ss_pred             -Cccce
Q psy3619         167 -GVMCE  171 (418)
Q Consensus       167 -g~~C~  171 (418)
                       |..|+
T Consensus        77 d~~~C~   82 (386)
T 3v65_B           77 DRRSCK   82 (386)
T ss_dssp             TSSCEE
T ss_pred             CCCeEC
Confidence             67776

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.54  E-value=7.7e-08  Score=58.66  Aligned_cols=37  Identities=51%  Similarity=1.269  Sum_probs=31.3

Q ss_pred             cCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcC
Q psy3619         173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      ++++|..+||.++++|++..++|+|.|++||+|..|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            5678888888888888888888888888888888886

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.45  E-value=1.8e-07  Score=61.13  Aligned_cols=40  Identities=35%  Similarity=0.876  Sum_probs=34.4

Q ss_pred             CCCCCCCC---CCCCCCeee--cCCCCeeeeCCCCccCCccccCC
Q psy3619          95 LIDDCASE---PCQNGGSCV--DMLDGFMCQCRPGFVGLQCEADI  134 (418)
Q Consensus        95 ~~~~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~g~~C~~~~  134 (418)
                      ++++|...   ||.++++|+  +..++|+|.|++||+|..|+..+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   46 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD   46 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence            57888876   999999998  78889999999999999997544

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.41  E-value=3.5e-08  Score=66.08  Aligned_cols=44  Identities=27%  Similarity=0.791  Sum_probs=36.6

Q ss_pred             CccCCCCCCCCCCCCC--CeeecCCCCeeeeCCCCcc-CCccccCCCcC
Q psy3619          92 CQHLIDDCASEPCQNG--GSCVDMLDGFMCQCRPGFV-GLQCEADIDEC  137 (418)
Q Consensus        92 C~~~~~~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-g~~C~~~~~~C  137 (418)
                      ++ ++|+|..+||.++  ++|+++.++|+|.|++||+ |..|+ +.++|
T Consensus         8 ~~-~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~-~~~~C   54 (61)
T 2k2s_B            8 SE-TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT-GNVTC   54 (61)
T ss_dssp             TT-SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS-SCEEE
T ss_pred             cC-CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC-CCCEe
Confidence            44 6889999999988  7999999999999999999 99987 44444

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.41  E-value=4.4e-08  Score=64.69  Aligned_cols=38  Identities=21%  Similarity=0.179  Sum_probs=34.8

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeecccccccCC
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRANG   39 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~~~~g   39 (418)
                      |+|.|+|++|+|+|.|++||.+..|+++|.+++++.-|
T Consensus        11 C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~cg   48 (55)
T 2jkh_L           11 CDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG   48 (55)
T ss_dssp             CSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred             cCcEeEcCCCCeEEeCCCCCEECCCCCeeccCccccCC
Confidence            88999999999999999999999999999998887553

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.41  E-value=5.5e-08  Score=62.98  Aligned_cols=37  Identities=19%  Similarity=0.067  Sum_probs=33.7

Q ss_pred             CCCcccccCCCccccccCCCCcCccceeeeccccccc
Q psy3619           1 MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRA   37 (418)
Q Consensus         1 ~C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~~~   37 (418)
                      .|+|.|+|++|+|+|.|++||.+..|+++|.+++++.
T Consensus         7 ~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p   43 (51)
T 1kig_L            7 GCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             SSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             CcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence            3899999999999999999999999999999887753

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.39  E-value=2.6e-07  Score=58.13  Aligned_cols=37  Identities=32%  Similarity=0.768  Sum_probs=25.7

Q ss_pred             CCCCC---CCCCCCeee--cCCCCeeeeCCCCccCCccccCC
Q psy3619          98 DCASE---PCQNGGSCV--DMLDGFMCQCRPGFVGLQCEADI  134 (418)
Q Consensus        98 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~g~~C~~~~  134 (418)
                      +|..+   ||.++++|+  +..++|+|.|++||+|.+|+.++
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   43 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD   43 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence            45555   777777776  56667777777777777776544

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.37  E-value=5.8e-07  Score=58.74  Aligned_cols=42  Identities=36%  Similarity=0.933  Sum_probs=35.2

Q ss_pred             cCCCCCCC---CCCCCcEEE--eCCCCeEEeCCCCcCCCCcCcCCCC
Q psy3619         173 NIDDCKSN---PCLNGGICR--DGVAKFTCDCPPGWTGSRCEKDIGS  214 (418)
Q Consensus       173 ~~~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~~~~~  214 (418)
                      ++++|..+   ||.++|+|+  +..++|.|.|++||+|.+|+..+..
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~~   48 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDLR   48 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCcc
Confidence            46778776   999999998  7888999999999999999865543

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.37  E-value=3.7e-07  Score=57.41  Aligned_cols=38  Identities=34%  Similarity=0.832  Sum_probs=31.0

Q ss_pred             CCCCC---CCCCCcEEE--eCCCCeEEeCCCCcCCCCcCcCCC
Q psy3619         176 DCKSN---PCLNGGICR--DGVAKFTCDCPPGWTGSRCEKDIG  213 (418)
Q Consensus       176 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~~~~  213 (418)
                      +|..+   ||.++|+|+  +..++|+|.|++||+|.+|+.+++
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~   44 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDL   44 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccC
Confidence            45555   899999997  677889999999999999986654

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.32  E-value=1e-07  Score=62.22  Aligned_cols=38  Identities=16%  Similarity=0.051  Sum_probs=34.6

Q ss_pred             CCcccccCCC-ccccccCCCCcCccceeeecccccccCC
Q psy3619           2 CDQKTLWTPS-SLVPDCVSEDTQQADYHIVASIAYRANG   39 (418)
Q Consensus         2 C~~~C~~~~g-~~~C~C~~G~~~~~~~~~c~~~~~~~~g   39 (418)
                      |+|+|+|++| +|+|.|++||.+..|+++|.+++++.-|
T Consensus         9 C~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~cg   47 (53)
T 2bz6_L            9 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG   47 (53)
T ss_dssp             CSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred             cCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccccCC
Confidence            8999999999 8999999999999999999998887543

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.28  E-value=2.5e-07  Score=63.05  Aligned_cols=45  Identities=27%  Similarity=0.762  Sum_probs=34.3

Q ss_pred             CCCCCCCCCCCCCeeec-----CCCCeeeeCCCCccCCccccCCCcCCCC
Q psy3619          96 IDDCASEPCQNGGSCVD-----MLDGFMCQCRPGFVGLQCEADIDECLSD  140 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~g~~C~~~~~~C~~~  140 (418)
                      .++|..+||.++++|++     ..++|+|.|++||+|..|+.+++++...
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~~   55 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQN   55 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTT
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCccccc
Confidence            45677778888888875     5677888888888888887777776543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.27  E-value=9.3e-08  Score=92.71  Aligned_cols=46  Identities=35%  Similarity=1.040  Sum_probs=8.6

Q ss_pred             eeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcC
Q psy3619         158 QCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       158 ~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      .|.|++||+|..|+  ++.|.. +|.++++|++.   +.|.|++||+|..|+
T Consensus       409 ~C~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~~C~  454 (463)
T 2wg3_C          409 KCCCSPGWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLCKKGYLGPQCE  454 (463)
T ss_dssp             CEEECTTEESTTSC--EECC--------------------------------
T ss_pred             eECCCCCcCCCcCC--cCcCCC-CCCCCCEECCC---CEEECCCCcccCCCC
Confidence            45555555555553  234444 45555555443   245555555555554

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.25  E-value=4.5e-07  Score=61.75  Aligned_cols=44  Identities=30%  Similarity=0.791  Sum_probs=37.3

Q ss_pred             CCCCCCCCCCCCcEEEe-----CCCCeEEeCCCCcCCCCcCcCCCCCcC
Q psy3619         174 IDDCKSNPCLNGGICRD-----GVAKFTCDCPPGWTGSRCEKDIGSCTN  217 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~~G~~C~~~~~~C~~  217 (418)
                      .++|..+||.++|+|++     ..++|.|.|++||+|.+|+.+++++..
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~   54 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ   54 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence            45677789999999986     678899999999999999988887654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.18  E-value=1.9e-07  Score=90.45  Aligned_cols=76  Identities=30%  Similarity=0.769  Sum_probs=27.4

Q ss_pred             EecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeeee
Q psy3619          81 CSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQCE  160 (418)
Q Consensus        81 C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C~  160 (418)
                      +.|..+|.|..|+  +++|.. +|.+ ++|++.   ++|.|++||+|..|+  +++|.. +|.+++.  |++.   +.|.
T Consensus       379 ~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~--~~~C~~-~C~~~g~--C~~~---~~C~  443 (463)
T 2wg3_C          379 EECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR--TAKCEP-ACRHGGV--CVRP---NKCL  443 (463)
T ss_dssp             GGGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECTTEESTTSC--EECC-----------------------
T ss_pred             ccCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCCCcCCCcCC--cCcCCC-CCCCCCE--ECCC---CEEE
Confidence            5566666666664  455654 4654 566542   466666666666663  345554 5555443  5543   3666


Q ss_pred             cCCCCcCccce
Q psy3619         161 CNVGYTGVMCE  171 (418)
Q Consensus       161 C~~G~~g~~C~  171 (418)
                      |++||+|..|+
T Consensus       444 C~~G~~G~~C~  454 (463)
T 2wg3_C          444 CKKGYLGPQCE  454 (463)
T ss_dssp             -----------
T ss_pred             CCCCcccCCCC
Confidence            66666666665

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.17  E-value=3.2e-07  Score=63.30  Aligned_cols=38  Identities=16%  Similarity=0.051  Sum_probs=35.1

Q ss_pred             CCcccccCCC-ccccccCCCCcCccceeeecccccccCC
Q psy3619           2 CDQKTLWTPS-SLVPDCVSEDTQQADYHIVASIAYRANG   39 (418)
Q Consensus         2 C~~~C~~~~g-~~~C~C~~G~~~~~~~~~c~~~~~~~~g   39 (418)
                      |+|+|+|++| +|+|.|++||.+..|+++|.+++++.-|
T Consensus        15 C~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg   53 (69)
T 1kli_L           15 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG   53 (69)
T ss_dssp             CSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred             cCCEeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCC
Confidence            8999999999 8999999999999999999998887654

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.16  E-value=2.7e-07  Score=61.69  Aligned_cols=37  Identities=27%  Similarity=0.721  Sum_probs=31.2

Q ss_pred             cCCCCCCCCCCCC--cEEEeCCCCeEEeCCCCcC-CCCcC
Q psy3619         173 NIDDCKSNPCLNG--GICRDGVAKFTCDCPPGWT-GSRCE  209 (418)
Q Consensus       173 ~~~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~~-G~~C~  209 (418)
                      ++++|..+||.++  ++|++..++|.|.|++||+ |..|+
T Consensus        10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            4677878888888  7898888889999999998 88886

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.11  E-value=3.1e-07  Score=59.77  Aligned_cols=42  Identities=29%  Similarity=0.748  Sum_probs=34.4

Q ss_pred             eeeecCCCCcCccceecCCCCCCCCCCCCcEEEe----CCCCeEEeCCCCcCCCCcCc
Q psy3619         157 FQCECNVGYTGVMCETNIDDCKSNPCLNGGICRD----GVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       157 ~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~----~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|.|++||+            .+||.|+|+|++    ..++|.|.|++||+|.+|+.
T Consensus         3 ~~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A            3 PTYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             CCBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred             eeeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence            4688888886            357889999986    45678999999999999974

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.09  E-value=1.9e-06  Score=70.88  Aligned_cols=30  Identities=37%  Similarity=0.942  Sum_probs=25.5

Q ss_pred             CCCCCCeeecCC--CCeee-eCCCCccCCcccc
Q psy3619         103 PCQNGGSCVDML--DGFMC-QCRPGFVGLQCEA  132 (418)
Q Consensus       103 ~C~~~~~C~~~~--g~~~C-~C~~G~~g~~C~~  132 (418)
                      ||.++++|+...  +.++| .|++||+|.+|+.
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~   34 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL   34 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC
Confidence            588889998765  57899 7999999999973

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.08  E-value=1.4e-06  Score=54.84  Aligned_cols=36  Identities=33%  Similarity=0.958  Sum_probs=27.1

Q ss_pred             CCCCCCC---CCCCCCCeeecCC--CCeeeeCCCCccCCccc
Q psy3619          95 LIDDCAS---EPCQNGGSCVDML--DGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        95 ~~~~C~~---~~C~~~~~C~~~~--g~~~C~C~~G~~g~~C~  131 (418)
                      ++++|..   +||.+ ++|+...  ++|.|.|++||+|.+|+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence            4677776   78887 7887643  56888888888888886

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.08  E-value=2.5e-07  Score=60.16  Aligned_cols=41  Identities=32%  Similarity=0.726  Sum_probs=30.2

Q ss_pred             eEEecCCCCccCCCccCCCCCCCCCCCCCCeeec----CCCCeeeeCCCCccCCccc
Q psy3619          79 FSCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVD----MLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        79 ~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~----~~g~~~C~C~~G~~g~~C~  131 (418)
                      ++|.|++||+            .+||.++++|++    ..++|.|.|++||+|.+|+
T Consensus         3 ~~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A            3 PTYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             CCBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             eeeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            4577888776            346777888875    3456888888888888886

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.07  E-value=2.4e-06  Score=53.75  Aligned_cols=37  Identities=43%  Similarity=0.904  Sum_probs=29.4

Q ss_pred             cCCCCCC---CCCCCCcEEEeCC--CCeEEeCCCCcCCCCcCc
Q psy3619         173 NIDDCKS---NPCLNGGICRDGV--AKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       173 ~~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~~G~~C~~  210 (418)
                      ++++|..   +||.+ |+|....  ++|.|.|++||+|.+|+.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence            3567776   88988 7998643  678999999999999974

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=98.04  E-value=2e-06  Score=80.71  Aligned_cols=112  Identities=25%  Similarity=0.548  Sum_probs=32.1

Q ss_pred             CCCC-CeeecCCCCeeeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCCCCeee-ecCCCCcCccceecCCCCCCCC
Q psy3619         104 CQNG-GSCVDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLDNKFQC-ECNVGYTGVMCETNIDDCKSNP  181 (418)
Q Consensus       104 C~~~-~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~~~~~C-~C~~G~~g~~C~~~~~~C~~~~  181 (418)
                      |..+ ..|....+.+.|.|+.+++|..|+.-.......|+..+.. .++.....+.| .|+-++.|..|+...     .+
T Consensus       299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~-~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~  372 (426)
T 3zyj_B          299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSY-LPIPKGAANACIPSISSIGTNVCDNEL-----LH  372 (426)
T ss_dssp             CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBC-CSSSSCBCCCCCCCCC------------------
T ss_pred             CCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcc-cccCCCCCCcccCCCCCCCcCccccCc-----cc
Confidence            4433 4687766778888888888888874333333334433211 11222334456 355556677776332     57


Q ss_pred             CCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcCCCCCCCCeEeecCC
Q psy3619         182 CLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQNDANCIDLFQ  231 (418)
Q Consensus       182 C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~c~~~~~C~~~~~  231 (418)
                      |.++++|.+..   +|.|++||+|..|+.       .+|.+++.|....|
T Consensus       373 C~ngg~C~~~~---~C~C~~G~~G~~Ce~-------c~C~~~g~C~~~~G  412 (426)
T 3zyj_B          373 CQNGGTCHNNV---RCLCPAAYTGILCEK-------LRCEEAGSCGSDSG  412 (426)
T ss_dssp             --------------------------------------------------
T ss_pred             CCCCCCcCCCC---CCcCCCCCcCCCCcC-------CCCCCCCcccCCCC
Confidence            88999998765   799999999998863       24666677765444

>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}

Probab=98.03  E-value=2.5e-05  Score=72.76  Aligned_cols=86  Identities=17%  Similarity=0.236  Sum_probs=63.2

Q ss_pred             eeccccccCCCceEEEEEEe--CCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEe
Q psy3619         270 FHEYATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQI  347 (418)
Q Consensus       270 ~~s~~~l~dg~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~i  347 (418)
                      +.+...+.+|+||||.++++  ++.++|+|||....+.........+.....|+||.....   ......|.|-|.+|+|
T Consensus       212 ~~s~~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~---~~~~~~f~G~IdevrI  288 (355)
T 4dqa_A          212 YRVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGF---KWGERPFHGKMSEVRV  288 (355)
T ss_dssp             EECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTC---TTCCCCCEEEEEEEEE
T ss_pred             cccCCcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCC---CCCCcceeEEEEEEEE
Confidence            44667899999999999999  899999999987665442222223333468999975432   1124679999999999


Q ss_pred             cCeecChhhhh
Q psy3619         348 WNRALDFTNEI  358 (418)
Q Consensus       348 n~~~l~l~~~~  358 (418)
                      |++.|...+..
T Consensus       289 w~~aLs~~eI~  299 (355)
T 4dqa_A          289 WSVARTENQLK  299 (355)
T ss_dssp             ESSCCCHHHHH
T ss_pred             ECCcCCHHHHH
Confidence            99999865543

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.03  E-value=8.9e-07  Score=59.06  Aligned_cols=33  Identities=12%  Similarity=0.183  Sum_probs=30.3

Q ss_pred             CCcccccCC-CccccccCCCCcCccceeeecccc
Q psy3619           2 CDQKTLWTP-SSLVPDCVSEDTQQADYHIVASIA   34 (418)
Q Consensus         2 C~~~C~~~~-g~~~C~C~~G~~~~~~~~~c~~~~   34 (418)
                      |+|+|+|++ |+|.|.|++||.+..|+++|.+++
T Consensus         9 C~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~   42 (59)
T 2wph_E            9 CEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAV   42 (59)
T ss_dssp             CSSEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred             cCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence            899999999 699999999999999999998753

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.95  E-value=4.2e-06  Score=78.58  Aligned_cols=112  Identities=21%  Similarity=0.503  Sum_probs=37.5

Q ss_pred             CCCCC-ceEeeCCCCeEEecCCCCccCCCccCCCCCCCCCCCCCCee-ecCCCCeeee-CCCCccCCccccCCCcCCCCC
Q psy3619          65 NDSIP-GTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQNGGSC-VDMLDGFMCQ-CRPGFVGLQCEADIDECLSDP  141 (418)
Q Consensus        65 ~c~~~-~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C-~~~~g~~~C~-C~~G~~g~~C~~~~~~C~~~~  141 (418)
                      .|..+ ..|....+.+.|.|+.+++|..|+.-.+.....|+..+..| +.....+.|. |+-++.|..|+.+.     .+
T Consensus       298 ~CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~  372 (426)
T 3zyj_B          298 KCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LH  372 (426)
T ss_dssp             CCSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------
T ss_pred             cCCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----cc
Confidence            45555 47998778899999999999999843333334455543322 2233456674 56566688886443     46


Q ss_pred             CCCCCcceeecCCCCeeeecCCCCcCccceecCCCCCCCCCCCCcEEEeCCC
Q psy3619         142 CSPEGTDKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVA  193 (418)
Q Consensus       142 c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~  193 (418)
                      |.+++.  |.+..   +|.|++||+|..|+.       .+|.++|+|....|
T Consensus       373 C~ngg~--C~~~~---~C~C~~G~~G~~Ce~-------c~C~~~g~C~~~~G  412 (426)
T 3zyj_B          373 CQNGGT--CHNNV---RCLCPAAYTGILCEK-------LRCEEAGSCGSDSG  412 (426)
T ss_dssp             ----------------------------------------------------
T ss_pred             CCCCCC--cCCCC---CCcCCCCCcCCCCcC-------CCCCCCCcccCCCC
Confidence            666665  87665   999999999998862       34777788876554

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.83  E-value=3.6e-06  Score=55.00  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=27.6

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeec
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVA   31 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~   31 (418)
                      |.|.|+|++|+|+|.|++||.+..+++.|.
T Consensus        22 C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A           22 CQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             TSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence            889999999999999999999988888774

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.68  E-value=1.5e-05  Score=51.77  Aligned_cols=34  Identities=32%  Similarity=0.959  Sum_probs=29.2

Q ss_pred             CCCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCcCC
Q psy3619         179 SNPCLNGGICR--DGVAKFTCDCPPGWTGSRCEKDI  212 (418)
Q Consensus       179 ~~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~~~  212 (418)
                      .+||.++|+|+  +..++|.|.|++||+|.+|+..+
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~   46 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD   46 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence            57899999998  67788999999999999998543

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.67  E-value=1.4e-05  Score=52.45  Aligned_cols=41  Identities=17%  Similarity=0.465  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCCCeeecCCCCeeeeCCCCcc----CCccccCCCcCC
Q psy3619          97 DDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCEADIDECL  138 (418)
Q Consensus        97 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C~  138 (418)
                      |+|+..+-...+.|+|++|+|+|.|++||.    |..|. ++++|.
T Consensus         2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI-PTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE-ESSSSC
T ss_pred             ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeec-cCcccc
Confidence            455533211224788887888888888876    55665 666653

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=97.61  E-value=9e-06  Score=53.87  Aligned_cols=32  Identities=19%  Similarity=0.438  Sum_probs=26.5

Q ss_pred             CccCCceEEeeC-----CcccccCceeeecCCCCCCccCCCCCCCcccccccc
Q psy3619         369 PVLHTGLVLTWT-----GYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTV  416 (418)
Q Consensus       369 pc~~~g~c~~~~-----~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~~  416 (418)
                      ||+|+|+|..++     .+                .|.|++||+|++||....
T Consensus        15 pC~NGGtC~~~~~~~~~~~----------------~C~C~~Gf~G~~Ce~~~~   51 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVY----------------SCECAIGFMGQRCEYKEI   51 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEE----------------EEEECTTEESSSSCEECC
T ss_pred             cCCCCCEEeCCccCCCCCE----------------EeECCCCCccCCCcccCC
Confidence            999999998543     34                799999999999998653

>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A

Probab=97.61  E-value=0.00028  Score=62.16  Aligned_cols=69  Identities=17%  Similarity=0.243  Sum_probs=49.3

Q ss_pred             cccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCccc-----CCCccEEecccCCCCCCCccCCCceEEeeeEEe
Q psy3619         273 YATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSL-----PQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQI  347 (418)
Q Consensus       273 ~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l-----~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~i  347 (418)
                      ...+.||+||+|.+...+..++|+||-....+.........+     ...+.++||.....      .. |+|=|++|+|
T Consensus       131 ~~~L~Dg~WH~lalsV~~~~VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~------~~-F~G~lq~l~i  203 (251)
T 1za4_A          131 EALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN------DN-FQGVLQNVRF  203 (251)
T ss_dssp             SCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT------CB-CCEEEEEEEE
T ss_pred             cccccCCCEEEEEEEEECCEEEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC------CC-CeEEeEEEEE
Confidence            356899999999999999999999998765544322222222     12567888854322      24 9999999998


Q ss_pred             c
Q psy3619         348 W  348 (418)
Q Consensus       348 n  348 (418)
                      -
T Consensus       204 ~  204 (251)
T 1za4_A          204 V  204 (251)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A

Probab=97.59  E-value=0.00031  Score=60.23  Aligned_cols=67  Identities=18%  Similarity=0.262  Sum_probs=47.9

Q ss_pred             ccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccC-C----CccEEecccCCCCCCCccCCCceEEeeeEEe
Q psy3619         274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLP-Q----YGWVVLGKPRPDNIKAYTEAGFEGKLTKVQI  347 (418)
Q Consensus       274 ~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~-~----~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~i  347 (418)
                      ..+.||+||+|.+...+..++|+||-....+.........+. .    .+.++||.....      .. |+|=|++|+|
T Consensus       122 v~l~dg~WH~l~l~V~~~~v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~------~~-F~G~lq~l~i  193 (209)
T 2erf_A          122 ALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN------DN-FQGVLQNVRF  193 (209)
T ss_dssp             CCCCSSSEEEEEEEEETTEEEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT------CB-CCEEEEEEEE
T ss_pred             cccCCCcEEEEEEEEECCEEEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC------CC-CeEEeEEEEE
Confidence            458999999999999999999999986655433222222221 1    467888854321      23 9999999988

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.58  E-value=9.5e-05  Score=53.67  Aligned_cols=63  Identities=19%  Similarity=0.466  Sum_probs=51.2

Q ss_pred             CCCCCCceEee-CCCCeEEecCCCCc--cCCCccCC-CCCCCCC--CCCCCeeecCC-----CCeeeeCCCCcc
Q psy3619          64 PNDSIPGTCTD-LVGGFSCSCDLGFT--GKHCQHLI-DDCASEP--CQNGGSCVDML-----DGFMCQCRPGFV  126 (418)
Q Consensus        64 ~~c~~~~~C~~-~~g~~~C~C~~G~~--g~~C~~~~-~~C~~~~--C~~~~~C~~~~-----g~~~C~C~~G~~  126 (418)
                      ..|..++.|.+ ..|...|+|.+||.  |..|..+. +.|+.++  |..+|.|+.+.     +...|.|.+||.
T Consensus        10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           10 KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            57889999997 47889999999999  45787432 6788654  99999999875     568999999975

>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}

Probab=97.56  E-value=0.00089  Score=58.71  Aligned_cols=69  Identities=20%  Similarity=0.254  Sum_probs=51.8

Q ss_pred             cccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecC
Q psy3619         275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWN  349 (418)
Q Consensus       275 ~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~  349 (418)
                      .+.||+||+|.+...+..++|+||=....+... .....++..+.++||......     ...|.|=|++|.|--
T Consensus       151 ~L~Dg~WHklalsV~~~~VtLyvDC~~~~~~~l-~~~~~i~~~G~~~lG~~~~~~-----~~~f~g~lQ~l~i~~  219 (245)
T 2uur_A          151 SLFDSQWHKIMIGVERSSATLFVDCNRIESLPI-KPRGPIDIDGFAVLGKLADNP-----QVSVPFELQWMLIHC  219 (245)
T ss_dssp             GGCSSSCEEEEEEEETTEEEEEETTEEEEEEEC-CCBCCCCCSSEEEEEEESSCT-----TCBCCEEEEEEEEES
T ss_pred             cccCCCEEEEEEEEECCEEEEEEecCccccccc-CCCCccccCCEEEEEEecCCC-----CCceEEEeEEEEEEc
Confidence            589999999999999999999999766554432 233456778888988642211     236999999999844

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.52  E-value=3.4e-05  Score=53.05  Aligned_cols=43  Identities=23%  Similarity=0.403  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCCCCeeecCCC-CeeeeCCCCcc----CCccccCCCcCC
Q psy3619          95 LIDDCASEPCQNGGSCVDMLD-GFMCQCRPGFV----GLQCEADIDECL  138 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g-~~~C~C~~G~~----g~~C~~~~~~C~  138 (418)
                      |+++|+..+-.....|+++.| +|+|.|++||.    |..|. ++++|.
T Consensus         4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec~   51 (69)
T 1kli_L            4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEYP   51 (69)
T ss_dssp             CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSSC
T ss_pred             ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCccc-Cccccc
Confidence            788887655444568999988 79999999997    67786 777763

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.50  E-value=4e-05  Score=49.69  Aligned_cols=31  Identities=26%  Similarity=0.743  Sum_probs=26.1

Q ss_pred             CCCCCCceEe--eCCCCeEEecCCCCccCCCcc
Q psy3619          64 PNDSIPGTCT--DLVGGFSCSCDLGFTGKHCQH   94 (418)
Q Consensus        64 ~~c~~~~~C~--~~~g~~~C~C~~G~~g~~C~~   94 (418)
                      ++|.++|+|+  +..++|+|.|++||+|..|+.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   44 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence            5688889998  567789999999999999974

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.46  E-value=0.00013  Score=56.67  Aligned_cols=58  Identities=22%  Similarity=0.436  Sum_probs=43.5

Q ss_pred             CCCCCceEeeCC--CCe-EEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          65 NDSIPGTCTDLV--GGF-SCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        65 ~c~~~~~C~~~~--g~~-~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      +|.++|+|++..  .+| +|.|++||+|..|+.+++    .+|..+     ....|++.+..++.|..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-----ccccceeeccccccCCccc
Confidence            488899999874  455 999999999999986543    123211     1235899999999999987

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.40  E-value=3.2e-05  Score=63.67  Aligned_cols=43  Identities=28%  Similarity=0.852  Sum_probs=33.4

Q ss_pred             CCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccccCCCcCCC
Q psy3619          96 IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADIDECLS  139 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~~C~~  139 (418)
                      .++|...||.++++|+++.++|.|.|++||+|..|+ .+++|..
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce-~~~~c~~  161 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE-YVRDDDD  161 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC-EECC---
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc-cCcccCC
Confidence            467888888888899998888999999999999998 4456753

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.40  E-value=9.5e-05  Score=48.06  Aligned_cols=31  Identities=42%  Similarity=1.073  Sum_probs=25.3

Q ss_pred             CCCCCCC----------CCCCCCCeeecCCCCeeeeCCCCccC
Q psy3619          95 LIDDCAS----------EPCQNGGSCVDMLDGFMCQCRPGFVG  127 (418)
Q Consensus        95 ~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~G~~g  127 (418)
                      |||+|..          .+|.  +.|+|+.|+|.|.|++||++
T Consensus         3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~   43 (53)
T 1apq_A            3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEE
T ss_pred             ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeE
Confidence            7888875          4565  58999999999999999974

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.36  E-value=6.7e-05  Score=61.69  Aligned_cols=43  Identities=28%  Similarity=0.813  Sum_probs=35.3

Q ss_pred             CCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCCCCcC
Q psy3619         174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIGSCTN  217 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~  217 (418)
                      .+.|..++|.++++|.+..++|.|.|++||+|..|+ .+++|..
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce-~~~~c~~  161 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE-YVRDDDD  161 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC-EECC---
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc-cCcccCC
Confidence            356778889999999999999999999999999998 5567764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.29  E-value=0.00024  Score=55.09  Aligned_cols=57  Identities=28%  Similarity=0.647  Sum_probs=43.6

Q ss_pred             CCCCCCeeecCC--CCe-eeeCCCCccCCccccCCC-cCCCCCCCCCCcceeecCCCCeeeecCCCCcCccce
Q psy3619         103 PCQNGGSCVDML--DGF-MCQCRPGFVGLQCEADID-ECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE  171 (418)
Q Consensus       103 ~C~~~~~C~~~~--g~~-~C~C~~G~~g~~C~~~~~-~C~~~~c~~~~~~~C~~~~~~~~C~C~~G~~g~~C~  171 (418)
                      ||.++++|++..  .+| .|.|++||+|..|+.+++ +|..+            ....|++.+..+++|..|+
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g------------~G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG------------NGHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS------------SCTTCCSCCCBBTTSCBBC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc------------ccccceeeccccccCCccc
Confidence            789999998874  456 999999999999986654 23211            2346888999999998887

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.22  E-value=0.00076  Score=49.22  Aligned_cols=67  Identities=25%  Similarity=0.504  Sum_probs=53.8

Q ss_pred             CCCCCCceEee-CCCCeEEecCCCCc--cCCCccCCCC-CCCCC--CCCCCeeecCC-CCeeeeCCCCcc-----CCccc
Q psy3619          64 PNDSIPGTCTD-LVGGFSCSCDLGFT--GKHCQHLIDD-CASEP--CQNGGSCVDML-DGFMCQCRPGFV-----GLQCE  131 (418)
Q Consensus        64 ~~c~~~~~C~~-~~g~~~C~C~~G~~--g~~C~~~~~~-C~~~~--C~~~~~C~~~~-g~~~C~C~~G~~-----g~~C~  131 (418)
                      ..|..++.|.. .+|...|.|..||.  |..|..+ +. |..+.  |..++.|..+. ....|.|..+|.     |..|.
T Consensus        16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~   94 (105)
T 1n1i_A           16 TNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS   94 (105)
T ss_dssp             SCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred             CCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence            36889999997 67889999999999  5588855 66 76554  99999999885 778999999975     65554

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=97.13  E-value=0.00015  Score=46.63  Aligned_cols=28  Identities=21%  Similarity=0.598  Sum_probs=15.4

Q ss_pred             eeecCCCCeeeeCCCCcc----CCccccCCCcC
Q psy3619         109 SCVDMLDGFMCQCRPGFV----GLQCEADIDEC  137 (418)
Q Consensus       109 ~C~~~~g~~~C~C~~G~~----g~~C~~~~~~C  137 (418)
                      .|+|++|+|+|.|++||.    |..|. +++++
T Consensus        11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~-dide~   42 (51)
T 1kig_L           11 FCREERSEVRCSCAHGYVLGDDSKSCV-STERF   42 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred             EeEcCCCCeEEeCCCCcEECCCCCccc-cCCcc
Confidence            456666666666666664    44454 44443

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.10  E-value=0.00029  Score=48.76  Aligned_cols=33  Identities=18%  Similarity=0.716  Sum_probs=25.6

Q ss_pred             CCCCCCC--CCCCCCCeeecCCCCeeee-CCCCccC
Q psy3619          95 LIDDCAS--EPCQNGGSCVDMLDGFMCQ-CRPGFVG  127 (418)
Q Consensus        95 ~~~~C~~--~~C~~~~~C~~~~g~~~C~-C~~G~~g  127 (418)
                      |||||..  .+|..+++|+|+.|+|+|. +..||.+
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~   37 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN   37 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence            6888875  4587778899999999886 5667774

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.05  E-value=0.00011  Score=64.88  Aligned_cols=41  Identities=29%  Similarity=0.718  Sum_probs=31.9

Q ss_pred             CCCCCC--CCCCCCCCeeecCCCCeeeeCCCCcc--CCccccCCCc
Q psy3619          95 LIDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFV--GLQCEADIDE  136 (418)
Q Consensus        95 ~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~--g~~C~~~~~~  136 (418)
                      |+|||+  ..+|..++.|+|+.|+|.|.|++||.  |..|. ++|+
T Consensus         4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d~   48 (285)
T 1gl4_A            4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEGS   48 (285)
T ss_dssp             ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETTC
T ss_pred             cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCCC
Confidence            789997  56799999999999999999999999  66776 5544

>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}

Probab=97.04  E-value=0.011  Score=48.94  Aligned_cols=76  Identities=14%  Similarity=0.215  Sum_probs=55.1

Q ss_pred             CCCceEEEEEEeC-CEEEEEEcCeeeccceec--CCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecCh
Q psy3619         278 DGQWHHVAIVWTQ-GTLTLITEGLIAGKVENY--GSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDF  354 (418)
Q Consensus       278 dg~WH~v~v~~~~-~~~~l~vD~~~~~~~~~~--~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l  354 (418)
                      +.+||+|.+..+. +..+|++||....+....  .....+ ....|.||+.....  +...-.|.|-|++|.|.+++|+-
T Consensus       104 ~~~wntvaf~~d~~~~~~ly~NG~~V~t~~~~~~~fi~~i-~ln~~~IG~~~r~s--g~~~y~F~G~Id~~~iYn~aLs~  180 (191)
T 2v73_A          104 NRGINTLALKIEKGIGAKIFLNGSLVKTVSDPNIKFLNAI-NLNSGFIGKTDRAN--GYNEYLFRGNIDFMNIYDKPVSD  180 (191)
T ss_dssp             CSSCEEEEEEEETTTEEEEEETTEEEEEEECTTCCCGGGS-CCCEEEESSCCCCS--SSCCCCCCEEEEEEEEESSCCCH
T ss_pred             CCceEEEEEEEcCCccEEEEECCEEEEEEecccccceeec-CCceEEEcceeecC--CceeeccCCeEEEEEEEcCcCCH
Confidence            3599999999985 699999999877665322  223334 44689999755432  22335799999999999999985


Q ss_pred             hh
Q psy3619         355 TN  356 (418)
Q Consensus       355 ~~  356 (418)
                      .+
T Consensus       181 eE  182 (191)
T 2v73_A          181 NY  182 (191)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.02  E-value=0.001  Score=48.26  Aligned_cols=69  Identities=22%  Similarity=0.593  Sum_probs=47.5

Q ss_pred             CCCCCCCCCCCeeec-CCCCeeeeCCCCcc--CCccccCC-CcCCCCCCCCCCcceeecCC-----CCeeeecCCCCc
Q psy3619          98 DCASEPCQNGGSCVD-MLDGFMCQCRPGFV--GLQCEADI-DECLSDPCSPEGTDKCLDLD-----NKFQCECNVGYT  166 (418)
Q Consensus        98 ~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~--g~~C~~~~-~~C~~~~c~~~~~~~C~~~~-----~~~~C~C~~G~~  166 (418)
                      .|....|+.++.|.. .++..+|.|.+||.  |..|..+. +.|..++-.+...+.|....     +...|.|.+||+
T Consensus         6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C            6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            355566889999987 47889999999999  56676332 56765442333344577664     467888888864

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.93  E-value=0.00034  Score=46.16  Aligned_cols=30  Identities=37%  Similarity=0.977  Sum_probs=26.0

Q ss_pred             CCCCCcEEE--e--CCCCeEEeCCCCcCCCCcCc
Q psy3619         181 PCLNGGICR--D--GVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       181 ~C~~~~~C~--~--~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +|.|+|+|.  .  ..+.|.|.|++||+|.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            799999998  3  45678999999999999984

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.83  E-value=0.00041  Score=44.90  Aligned_cols=28  Identities=29%  Similarity=0.706  Sum_probs=14.9

Q ss_pred             eeecCCC-CeeeeCCCCcc----CCccccCCCcC
Q psy3619         109 SCVDMLD-GFMCQCRPGFV----GLQCEADIDEC  137 (418)
Q Consensus       109 ~C~~~~g-~~~C~C~~G~~----g~~C~~~~~~C  137 (418)
                      .|+++.+ +|+|.|++||+    |..|. ++++|
T Consensus        12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec   44 (53)
T 2bz6_L           12 YCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY   44 (53)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred             EeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence            4555555 45555555554    44454 44444

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.76  E-value=0.0013  Score=45.39  Aligned_cols=27  Identities=15%  Similarity=0.266  Sum_probs=22.4

Q ss_pred             CCCCCCceEeeCCCCeEEe-cCCCCccC
Q psy3619          64 PNDSIPGTCTDLVGGFSCS-CDLGFTGK   90 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~-C~~G~~g~   90 (418)
                      ..|..+++|+|+.|+|+|. +..||.+.
T Consensus        11 ~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A           11 EACKGEMKCINHYGGYLCLPRSAAVIND   38 (71)
T ss_dssp             CSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred             CCCCCCCEeECCCCCeEecccCCccccc
Confidence            4688889999999999996 66788853

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.74  E-value=0.00028  Score=62.32  Aligned_cols=34  Identities=29%  Similarity=0.722  Sum_probs=29.4

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCc--cCCCccCCCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFT--GKHCQHLIDD   98 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~--g~~C~~~~~~   98 (418)
                      .+|..++.|+|+.|+|.|.|++||.  |..|. ++|+
T Consensus        13 ~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d~   48 (285)
T 1gl4_A           13 HQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEGS   48 (285)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETTC
T ss_pred             CCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCCC
Confidence            5688899999999999999999999  55787 6664

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=96.66  E-value=0.00067  Score=55.69  Aligned_cols=34  Identities=24%  Similarity=0.602  Sum_probs=27.8

Q ss_pred             CCCCCCCCccCCceEEeeCCcccccCceeeecCCCCCCccCCCCCCCcccccc
Q psy3619         362 VRDCRTEPVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQL  414 (418)
Q Consensus       362 ~~~C~~~pc~~~g~c~~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~  414 (418)
                      ...|. .+|.|+|.|.. .+                 +|.||+||+|+.||..
T Consensus       148 ~~~C~-~~C~ngG~Cv~-P~-----------------~C~C~~Gw~G~~C~~~  181 (188)
T 2ygo_A          148 QAECP-GGCRNGGFCNE-RR-----------------ICECPDGFHGPHCEGT  181 (188)
T ss_dssp             CCCCT-TCCCTTCEECT-TS-----------------CEECCTTCBTTTTCBC
T ss_pred             CCccC-CCCCCCCEeCC-CC-----------------cccCcCCCCCCCCcCC
Confidence            45676 68999999983 22                 8999999999999974

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.58  E-value=0.0045  Score=45.20  Aligned_cols=69  Identities=17%  Similarity=0.399  Sum_probs=47.1

Q ss_pred             CCCCCCCCCCCCeeec-CCCCeeeeCCCCcc--CCccccCCCc-CCCCCCCCCCcceeecCC-CCeeeecCCCCc
Q psy3619          97 DDCASEPCQNGGSCVD-MLDGFMCQCRPGFV--GLQCEADIDE-CLSDPCSPEGTDKCLDLD-NKFQCECNVGYT  166 (418)
Q Consensus        97 ~~C~~~~C~~~~~C~~-~~g~~~C~C~~G~~--g~~C~~~~~~-C~~~~c~~~~~~~C~~~~-~~~~C~C~~G~~  166 (418)
                      ..|....|+.++.|.. .+|.-+|.|..||.  |..|..+ +. |..+.-.+...+.|.... ....|.|..+|.
T Consensus        11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            3455556888899987 67888999999998  5677644 55 654442333334577664 677888877764

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.52  E-value=0.0011  Score=65.22  Aligned_cols=39  Identities=33%  Similarity=0.997  Sum_probs=35.2

Q ss_pred             CCCCCCCCCCCCcEEEe-CCCCeEEeCC-CCcCCCCcCcCC
Q psy3619         174 IDDCKSNPCLNGGICRD-GVAKFTCDCP-PGWTGSRCEKDI  212 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~G~~C~~~~  212 (418)
                      +++|..+||.++|+|.+ ..++|.|.|+ .||+|..|+..+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~   42 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE   42 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence            57889999999999999 8999999999 999999998543

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=96.48  E-value=0.0013  Score=41.61  Aligned_cols=17  Identities=29%  Similarity=0.946  Sum_probs=15.2

Q ss_pred             CccCCCCCCCccccccc
Q psy3619         399 QHICPPGYTGPECDQLT  415 (418)
Q Consensus       399 ~C~C~~Gy~G~~Ce~~~  415 (418)
                      .|.|++||+|++||...
T Consensus        31 ~C~C~~gy~G~RCe~~d   47 (50)
T 3e50_C           31 ACVCHSGYVGARCEHAD   47 (50)
T ss_pred             EEECCCCCcccCCCcee
Confidence            89999999999999753

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=96.41  E-value=0.0007  Score=55.13  Aligned_cols=38  Identities=26%  Similarity=0.665  Sum_probs=34.1

Q ss_pred             CCCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         362 VRDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       362 ~~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      ...|...||.++|.|. .|..|                .|.|.+||+|..||+.|
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~----------------~c~C~~g~~g~~Ce~~~  157 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNY----------------TCKCDPGFSGLKCEQIV  157 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEE----------------EEEECTTEESTTSCEEC
T ss_pred             cCCCCCCCCCCCCEeecCCCCe----------------eEECCCCccCccccccC
Confidence            4678889999999998 89999                99999999999999865

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.40  E-value=0.0012  Score=64.88  Aligned_cols=38  Identities=37%  Similarity=0.974  Sum_probs=34.6

Q ss_pred             CCCCCCCCCCCCCeeec-CCCCeeeeCC-CCccCCccccC
Q psy3619          96 IDDCASEPCQNGGSCVD-MLDGFMCQCR-PGFVGLQCEAD  133 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~C~~~  133 (418)
                      +|+|..+||.++++|++ ..++|+|.|+ +||+|..|+..
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   41 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence            68899999999999999 8889999999 99999999853

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=96.29  E-value=0.0011  Score=46.03  Aligned_cols=37  Identities=27%  Similarity=0.532  Sum_probs=26.6

Q ss_pred             CCCCC---CCCccCCceEEeeC---CcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         362 VRDCR---TEPVLHTGLVLTWT---GYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       362 ~~~C~---~~pc~~~g~c~~~~---~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      ...|.   .+.|.|| .|.-..   .+                .|.|++||+|.+||..+
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~~~~~----------------~C~C~~GYtG~RCE~l~   79 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKELRAP----------------SCICHPGYHGERCHGLS   79 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGGGTBC----------------CEEECTTEESTTCCEEC
T ss_pred             CCCCCccccCcCCCC-EeeeecCCCCe----------------EEEcCCCcccccccccC
Confidence            35677   6789886 785322   23                79999999999999753

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.17  E-value=0.0019  Score=63.65  Aligned_cols=37  Identities=41%  Similarity=1.075  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCCCCeeec-CCCCeeeeCC-CCccCCcccc
Q psy3619          96 IDDCASEPCQNGGSCVD-MLDGFMCQCR-PGFVGLQCEA  132 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~C~~  132 (418)
                      +++|..+||.++++|++ ..++|.|.|+ +||+|..|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            47899999999999996 4578999999 9999999984

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=96.13  E-value=0.0016  Score=52.94  Aligned_cols=39  Identities=31%  Similarity=0.957  Sum_probs=33.8

Q ss_pred             CCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCC
Q psy3619         174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI  212 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~  212 (418)
                      ...|..+||.+++.|.+....|.|.|.+||+|..|+.+|
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~  157 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV  157 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred             cCCCCCCCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence            356777889999999999999999999999999998643

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.04  E-value=0.0013  Score=61.15  Aligned_cols=35  Identities=11%  Similarity=0.121  Sum_probs=28.2

Q ss_pred             CCCcccccCCCccccccCCCCcCccceeeeccccc
Q psy3619           1 MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAY   35 (418)
Q Consensus         1 ~C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~   35 (418)
                      .|+|.|.|++|+|+|.|++||.+..++++|...+.
T Consensus         9 ~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            9 YCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             CCSSEECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             CCcCeeecCCCCeEEECCCCccCCCCCCccccccc
Confidence            49999999999999999999999989999866443

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=96.04  E-value=0.0077  Score=47.98  Aligned_cols=57  Identities=21%  Similarity=0.433  Sum_probs=39.6

Q ss_pred             CCCCCceEeeC--CCCe-EEecCCCCccCCCccCCCCCCCCCCCCCCeeecCCC-CeeeeCCCCccCCccc
Q psy3619          65 NDSIPGTCTDL--VGGF-SCSCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLD-GFMCQCRPGFVGLQCE  131 (418)
Q Consensus        65 ~c~~~~~C~~~--~g~~-~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g-~~~C~C~~G~~g~~C~  131 (418)
                      +|.++|+|+..  ...+ .|.|++||.|+.|+.++++          .|.+..| .|+........|..|.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----------~C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----------TCYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----------CEECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----------cCCCCCccccccceecCCcCCccc
Confidence            68999999875  2455 8999999999999854431          3443333 4666666666677775

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=96.03  E-value=0.0035  Score=61.78  Aligned_cols=37  Identities=41%  Similarity=1.060  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCcEEEe-CCCCeEEeCC-CCcCCCCcCc
Q psy3619         174 IDDCKSNPCLNGGICRD-GVAKFTCDCP-PGWTGSRCEK  210 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~G~~C~~  210 (418)
                      +++|..+||.++|+|.+ ..++|.|.|+ +||+|..|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence            36899999999999995 5689999999 9999999985

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=95.77  E-value=0.003  Score=56.84  Aligned_cols=37  Identities=16%  Similarity=0.080  Sum_probs=33.1

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeecccccccC
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRAN   38 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~~~~   38 (418)
                      |+|.|.++.++|+|.|.+||.+..+.+.|.+.++|.-
T Consensus        13 C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~C   49 (283)
T 3f1s_B           13 CQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC   49 (283)
T ss_dssp             CSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCT
T ss_pred             CCCEeeCCCCCeEecCCCCcccCCCCCcccccccccc
Confidence            8999999999999999999999999999987665543

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=95.65  E-value=0.0079  Score=55.92  Aligned_cols=29  Identities=28%  Similarity=0.636  Sum_probs=18.4

Q ss_pred             CCCCeeeeCCCCccCCccccCCCcCCCCC
Q psy3619         113 MLDGFMCQCRPGFVGLQCEADIDECLSDP  141 (418)
Q Consensus       113 ~~g~~~C~C~~G~~g~~C~~~~~~C~~~~  141 (418)
                      ..+.+.|.|.+||.|..|+...+.....+
T Consensus       268 ~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p  296 (375)
T 4aqt_A          268 EFDKLMCNCKHNTYGVDCEKCLPFFNDRP  296 (375)
T ss_dssp             TTSCEEECCCTTEESTTSCEECTTCCSSC
T ss_pred             CCCCeeeeCcCCCcCCCcccCCCCCcCCC
Confidence            34567788888888888875443333333

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.60  E-value=0.0027  Score=52.41  Aligned_cols=45  Identities=38%  Similarity=0.915  Sum_probs=34.9

Q ss_pred             CCCccCCCccCCCCCCCCC-----CCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          85 LGFTGKHCQHLIDDCASEP-----CQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        85 ~G~~g~~C~~~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      +||.+..+..++++|...+     |.  ..|+++.|+|.|.|++||+    +..|.
T Consensus       113 ~Gf~~~~~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~d~~~C~  166 (170)
T 1szb_A          113 TGFEAFYAAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYVLHRNKRTCS  166 (170)
T ss_dssp             CEEEEEEEEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             cCceeeeeccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcEECCCCCccc
Confidence            6777766555789998655     54  4899999999999999998    45554

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=95.42  E-value=0.0079  Score=38.10  Aligned_cols=30  Identities=30%  Similarity=0.600  Sum_probs=23.7

Q ss_pred             CCCCCCceEe--eCCCCeEEecCCCCccCCCcc
Q psy3619          64 PNDSIPGTCT--DLVGGFSCSCDLGFTGKHCQH   94 (418)
Q Consensus        64 ~~c~~~~~C~--~~~g~~~C~C~~G~~g~~C~~   94 (418)
                      .-|.+ |+|.  ...+.+.|.|++||+|.+|+.
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            45777 7897  445678999999999999984

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=95.39  E-value=0.0079  Score=39.71  Aligned_cols=19  Identities=21%  Similarity=0.712  Sum_probs=10.4

Q ss_pred             CeeecCC-CCeeeeCCCCcc
Q psy3619         108 GSCVDML-DGFMCQCRPGFV  126 (418)
Q Consensus       108 ~~C~~~~-g~~~C~C~~G~~  126 (418)
                      ..|++++ |+|.|.|++||.
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~   30 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYR   30 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEE
T ss_pred             CEeEeCCCCCEEeeCCCCcE
Confidence            3555555 355555555554

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=95.28  E-value=0.02  Score=45.55  Aligned_cols=57  Identities=28%  Similarity=0.697  Sum_probs=38.0

Q ss_pred             CCCCCCeeecC--CCCe-eeeCCCCccCCccccCCCcCCCCCCCCCCcceeecCC-CCeeeecCCCCcCccce
Q psy3619         103 PCQNGGSCVDM--LDGF-MCQCRPGFVGLQCEADIDECLSDPCSPEGTDKCLDLD-NKFQCECNVGYTGVMCE  171 (418)
Q Consensus       103 ~C~~~~~C~~~--~g~~-~C~C~~G~~g~~C~~~~~~C~~~~c~~~~~~~C~~~~-~~~~C~C~~G~~g~~C~  171 (418)
                      ||.++++|+..  ...+ .|.|++||.|..|+.++++    .        |.... ..|+.......+|..|+
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----~--------C~~g~G~~YrG~~s~T~sG~~Cq   74 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----T--------CYEGNGHFYRGKASTDTMGRPCL   74 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----C--------EECTTCTTCCSCCCBBTTSCBCC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----c--------CCCCCccccccceecCCcCCccc
Confidence            79999999765  2445 8999999999999765432    1        33322 24555555556666665

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=95.26  E-value=0.01  Score=37.52  Aligned_cols=30  Identities=37%  Similarity=0.956  Sum_probs=24.4

Q ss_pred             CCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCc
Q psy3619         180 NPCLNGGICR--DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       180 ~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|.+ |+|.  ...+.+.|.|++||+|.+|+.
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence            56888 7895  555678999999999999984

>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*

Probab=95.01  E-value=0.18  Score=51.09  Aligned_cols=75  Identities=12%  Similarity=0.099  Sum_probs=52.1

Q ss_pred             CceEEEEEEe--CCEEEEEEcCeeeccceecC--CCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChh
Q psy3619         280 QWHHVAIVWT--QGTLTLITEGLIAGKVENYG--SGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFT  355 (418)
Q Consensus       280 ~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~--~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~  355 (418)
                      .||+|.+..+  .+.++|+|||....+.....  ....++....|.||+....-.   ..-.|.|=|++|.|.+++|...
T Consensus       131 ~~~~va~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g~---~~~~f~G~id~~~iy~~~Ls~~  207 (686)
T 2jkb_A          131 VENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK---EHYLAKGSIDEISLFNKAISDQ  207 (686)
T ss_dssp             CCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE---EESCCEEEEEEEEEESSCCCHH
T ss_pred             ceeEEEEEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccccCCc---ccccccceEeEEEEecCCCCHH
Confidence            7999999999  77999999998776543221  111344457888886321111   1125999999999999999864


Q ss_pred             hh
Q psy3619         356 NE  357 (418)
Q Consensus       356 ~~  357 (418)
                      +.
T Consensus       208 ei  209 (686)
T 2jkb_A          208 EV  209 (686)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=94.99  E-value=0.0081  Score=41.75  Aligned_cols=35  Identities=34%  Similarity=0.972  Sum_probs=24.0

Q ss_pred             CCCC---CCCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCc
Q psy3619         175 DDCK---SNPCLNGGICR--DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       175 ~~C~---~~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|.   .+.|.++ +|.  ...+.+.|.|++||+|.+|+.
T Consensus        38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG   77 (79)
T ss_dssp             -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred             CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence            4455   4667775 784  334567888888888888873

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=94.97  E-value=0.025  Score=35.72  Aligned_cols=30  Identities=33%  Similarity=0.960  Sum_probs=23.5

Q ss_pred             CCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCc
Q psy3619         180 NPCLNGGICR--DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       180 ~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|.+ |+|.  ...+.+.|.|+.||+|.+|+.
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence            56776 5896  556678899999999999973

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=94.96  E-value=0.023  Score=35.85  Aligned_cols=29  Identities=31%  Similarity=0.630  Sum_probs=22.0

Q ss_pred             CCCCCCceEeeC--CCCeEEecCCCCccCCCc
Q psy3619          64 PNDSIPGTCTDL--VGGFSCSCDLGFTGKHCQ   93 (418)
Q Consensus        64 ~~c~~~~~C~~~--~g~~~C~C~~G~~g~~C~   93 (418)
                      .-|.+ |+|...  ...+.|.|++||+|.+|+
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C           14 QFCFH-GTCRFLVQEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             CcccC-CEEeeccCCCCeEEECCCCCcccCCC
Confidence            45665 488853  357889999999999987

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=94.81  E-value=0.018  Score=36.41  Aligned_cols=29  Identities=21%  Similarity=0.623  Sum_probs=23.3

Q ss_pred             CCCCCCceEe--eCCCCeEEecCCCCccCCCc
Q psy3619          64 PNDSIPGTCT--DLVGGFSCSCDLGFTGKHCQ   93 (418)
Q Consensus        64 ~~c~~~~~C~--~~~g~~~C~C~~G~~g~~C~   93 (418)
                      +-|.+ |+|.  ...+.+.|.|++||+|.+|+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence            34664 7998  44567899999999999997

>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*

Probab=94.37  E-value=0.28  Score=49.59  Aligned_cols=74  Identities=15%  Similarity=0.232  Sum_probs=51.9

Q ss_pred             CceEEEEEEe--CCEEEEEEcCeeeccceecCC--CcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChh
Q psy3619         280 QWHHVAIVWT--QGTLTLITEGLIAGKVENYGS--GKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFT  355 (418)
Q Consensus       280 ~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~--~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~  355 (418)
                      .||+|.+..+  .+.++|+|||....+.....-  ...++....|.||.....-   ...=.|.|=|++|.|.+++|...
T Consensus       109 ~~~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g---~~~~~f~G~i~~~~iy~~~Ls~~  185 (679)
T 2sli_A          109 VFNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQG---KIAYPFGGTIGDIKVYSNALSDE  185 (679)
T ss_dssp             CCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETT---EEESCCCEEEEEEEEESSCCCHH
T ss_pred             eeEEEEEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCC---ceeccccceEeEEEEeCCCCCHH
Confidence            6999999999  689999999987765432211  1224445788999742211   11125999999999999998864


Q ss_pred             h
Q psy3619         356 N  356 (418)
Q Consensus       356 ~  356 (418)
                      +
T Consensus       186 e  186 (679)
T 2sli_A          186 E  186 (679)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*

Probab=94.13  E-value=0.74  Score=42.82  Aligned_cols=73  Identities=16%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             CCCceEEEEEEe-CCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChhh
Q psy3619         278 DGQWHHVAIVWT-QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTN  356 (418)
Q Consensus       278 dg~WH~v~v~~~-~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~  356 (418)
                      +|+||+|.|+.+ .+...+.+||....+.... ....+.....+.||.....      ..++.+-|++|+|-.++|+-.+
T Consensus       165 ~nkW~fVtItvDR~g~~~IYING~Lv~s~~It-~lG~I~ss~~i~~gi~~~~------d~~~~~~IDef~Iynk~Lt~~E  237 (452)
T 1a8d_A          165 ANKWVFITITNDRLSSANLYINGVLMGSAEIT-GLGAIREDNNITLKLDRCN------NNNQYVSIDKFRIFCKALNPKE  237 (452)
T ss_dssp             SSSCEEEEEEECTTSEEEEEETTEEEEEEECT-TCCCCCCCSEEEEEEESCC------CTTCEEEEEEEEEESSCCCHHH
T ss_pred             CCeEEEEEEEECCCCCEEEEECCEEeeccchh-hccceeecCeEEEEEcccC------CCcccceEeeEEEecccCCHHH
Confidence            699999999998 6777999999877665322 2224444555555522211      1457789999999999998655


Q ss_pred             h
Q psy3619         357 E  357 (418)
Q Consensus       357 ~  357 (418)
                      .
T Consensus       238 I  238 (452)
T 1a8d_A          238 I  238 (452)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=94.08  E-value=0.022  Score=46.77  Aligned_cols=40  Identities=28%  Similarity=0.871  Sum_probs=32.6

Q ss_pred             CCCcCccceecCCCCCCCC-----CCCCcEEEeCCCCeEEeCCCCcC
Q psy3619         163 VGYTGVMCETNIDDCKSNP-----CLNGGICRDGVAKFTCDCPPGWT  204 (418)
Q Consensus       163 ~G~~g~~C~~~~~~C~~~~-----C~~~~~C~~~~~~~~C~C~~G~~  204 (418)
                      .||.+..+..++++|...+     |.+  .|.++.++|.|.|++||+
T Consensus       113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~  157 (170)
T 1szb_A          113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV  157 (170)
T ss_dssp             CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred             cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence            6777777666788998644     654  799999999999999997

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=94.04  E-value=0.13  Score=48.04  Aligned_cols=17  Identities=35%  Similarity=0.583  Sum_probs=13.4

Q ss_pred             CCeEEe-CCCCcCCCCcC
Q psy3619         193 AKFTCD-CPPGWTGSRCE  209 (418)
Q Consensus       193 ~~~~C~-C~~G~~G~~C~  209 (418)
                      ++..|. |+.+++|.+|+
T Consensus       355 ~~G~C~~C~~nt~G~~CE  372 (403)
T 2y38_A          355 GGGVCLDCQHHTTGINCE  372 (403)
T ss_dssp             CCEEESSCCSSEESTTSC
T ss_pred             CCCCCCCCcCcCcCCCCC
Confidence            355785 99999999887

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=93.97  E-value=0.14  Score=47.79  Aligned_cols=17  Identities=35%  Similarity=0.653  Sum_probs=11.4

Q ss_pred             CCeeee-cCCCCcCccce
Q psy3619         155 NKFQCE-CNVGYTGVMCE  171 (418)
Q Consensus       155 ~~~~C~-C~~G~~g~~C~  171 (418)
                      ++..|. |..+++|..|+
T Consensus       355 ~~G~C~~C~~nt~G~~CE  372 (403)
T 2y38_A          355 GGGVCLDCQHHTTGINCE  372 (403)
T ss_dssp             CCEEESSCCSSEESTTSC
T ss_pred             CCCCCCCCcCcCcCCCCC
Confidence            345774 77777777775

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=93.75  E-value=0.011  Score=54.86  Aligned_cols=40  Identities=13%  Similarity=0.259  Sum_probs=26.2

Q ss_pred             CCCCCceEe--eCCCCeEEecCCCCccCCCccCCCCCCCCCC
Q psy3619          65 NDSIPGTCT--DLVGGFSCSCDLGFTGKHCQHLIDDCASEPC  104 (418)
Q Consensus        65 ~c~~~~~C~--~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~C  104 (418)
                      .|..++.+.  +..+++.|.|.+||.|..|+.-.+.....|+
T Consensus       256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~  297 (375)
T 4aqt_A          256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPW  297 (375)
T ss_dssp             CCTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCC
T ss_pred             cCCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCC
Confidence            466666543  4456788999999999999843333333343

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=93.50  E-value=0.04  Score=45.20  Aligned_cols=38  Identities=42%  Similarity=1.009  Sum_probs=29.1

Q ss_pred             cCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCcccc
Q psy3619          89 GKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA  132 (418)
Q Consensus        89 g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~  132 (418)
                      .+.|.  ...|. .+|.++|.|+.   ..+|.|++||+|..|+.
T Consensus       143 ~K~C~--~~~C~-~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          143 FKTCQ--QAECP-GGCRNGGFCNE---RRICECPDGFHGPHCEG  180 (188)
T ss_dssp             EEEEC--CCCCT-TCCCTTCEECT---TSCEECCTTCBTTTTCB
T ss_pred             ccccc--CCccC-CCCCCCCEeCC---CCcccCcCCCCCCCCcC
Confidence            44565  35675 57999999984   46899999999999973

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=92.24  E-value=0.36  Score=34.24  Aligned_cols=63  Identities=19%  Similarity=0.350  Sum_probs=49.3

Q ss_pred             CCCCCCceEeeC-CCCeEEecCCCCc--cCCCccC-CCCCCCCC--CCCCCeeecCC-CCeeeeCCCCcc
Q psy3619          64 PNDSIPGTCTDL-VGGFSCSCDLGFT--GKHCQHL-IDDCASEP--CQNGGSCVDML-DGFMCQCRPGFV  126 (418)
Q Consensus        64 ~~c~~~~~C~~~-~g~~~C~C~~G~~--g~~C~~~-~~~C~~~~--C~~~~~C~~~~-g~~~C~C~~G~~  126 (418)
                      ..|..++.|... .+.-.|+|..||.  +..|..+ ...|..+.  |..++.|.... ....|.|...+.
T Consensus        10 tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           10 TNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             CCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred             CCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence            368889999975 5788999999998  7778743 23677554  88999998877 678999988754

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.11  E-value=0.037  Score=55.66  Aligned_cols=31  Identities=23%  Similarity=0.417  Sum_probs=28.9

Q ss_pred             CCcccccCC-CccccccCCCCcCccceeeecc
Q psy3619           2 CDQKTLWTP-SSLVPDCVSEDTQQADYHIVAS   32 (418)
Q Consensus         2 C~~~C~~~~-g~~~C~C~~G~~~~~~~~~c~~   32 (418)
                      |+|+|.+.+ ++|.|.|++||.+..|+++|.+
T Consensus       275 C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~  306 (628)
T 4a0p_A          275 CSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA  306 (628)
T ss_dssp             CSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred             cchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence            899999999 9999999999999989988865

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=91.47  E-value=0.055  Score=43.76  Aligned_cols=45  Identities=27%  Similarity=0.790  Sum_probs=30.8

Q ss_pred             CCCccCCCccCCCCCCCC---CCCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          85 LGFTGKHCQHLIDDCASE---PCQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        85 ~G~~g~~C~~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      .||.......++++|...   +|.  +.|.++.++|+|.|.+||+    |..|+
T Consensus       106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence            455544333367888752   353  5899999999999999998    45553

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=90.73  E-value=0.13  Score=46.02  Aligned_cols=32  Identities=19%  Similarity=0.546  Sum_probs=24.3

Q ss_pred             CCCCCCCC-CCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          95 LIDDCASE-PCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        95 ~~~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      +.|||... +-.....|.++.++|+|.|.+||.
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~   33 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYR   33 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEE
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcc
Confidence            35788765 445557899999999999999997

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=88.62  E-value=0.17  Score=46.71  Aligned_cols=35  Identities=26%  Similarity=0.723  Sum_probs=17.9

Q ss_pred             CCCCCCCCCCCCCeeecCCCCeeeeCCCCcc----CCccc
Q psy3619          96 IDDCASEPCQNGGSCVDMLDGFMCQCRPGFV----GLQCE  131 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----g~~C~  131 (418)
                      +|||+ .+-.+.+.|+|+.|+|.|.|.+||.    +..|.
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~   39 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK   39 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTSSCEE
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccc
Confidence            46776 3333345899999999999999997    45564

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=88.36  E-value=0.21  Score=44.34  Aligned_cols=52  Identities=29%  Similarity=0.596  Sum_probs=37.1

Q ss_pred             CCCCceEeeCCCCeEEecCCCCccCCCccCCC---------CCCCC----CCCCCCeeecCCCCeeeeCCCCc
Q psy3619          66 DSIPGTCTDLVGGFSCSCDLGFTGKHCQHLID---------DCASE----PCQNGGSCVDMLDGFMCQCRPGF  125 (418)
Q Consensus        66 c~~~~~C~~~~g~~~C~C~~G~~g~~C~~~~~---------~C~~~----~C~~~~~C~~~~g~~~C~C~~G~  125 (418)
                      |+.+|.|.-    ..|.|.+||.|+.|+-..+         .|...    .|+.+|.|+-    ..|.|..++
T Consensus       198 C~g~G~~~C----G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C----G~C~C~~~~  262 (280)
T 2p26_A          198 CHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSD  262 (280)
T ss_dssp             GGGSEEEET----TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET----TEEEECCCS
T ss_pred             cCCCCeECC----CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC----CeeECcCCC
Confidence            777777773    3699999999999873222         57532    3888888874    378887775

>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A

Probab=86.89  E-value=8  Score=35.34  Aligned_cols=72  Identities=10%  Similarity=0.086  Sum_probs=48.3

Q ss_pred             CCceEEEEEEe-CCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChhhh
Q psy3619         279 GQWHHVAIVWT-QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNE  357 (418)
Q Consensus       279 g~WH~v~v~~~-~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~~  357 (418)
                      |.|++|.|+-+ .+...|.++|....... ......+.....+.+|.....       .++-|.|++|.|+++.|+-.+.
T Consensus       141 n~W~hVTIT~drlg~~~IYINGklv~~~~-i~~L~~I~~sn~I~fg~~~~~-------~~~n~~Idd~~IfdKeLt~~EV  212 (413)
T 3rsj_A          141 NKWIFVTITNNRLGNSRIYINGNLIDEKS-ISNLGDIHVSDNILFKIVGCN-------DTRYVGIRYFKVFDTELGKTEI  212 (413)
T ss_dssp             TSEEEEEEEECTTSEEEEEETTEEEEEEE-CTTCCCCCCCSEEEEEEESCC-------SSCEEEEEEEEEESSCCCHHHH
T ss_pred             cceEEEEEEecCCCCeeEEECCEEeccee-hhhccccccccceEEeeeccc-------CcceEEEEEEEEEcccCCHHHH
Confidence            99999999997 45569999997766543 222222333345555432222       1478999999999999986544


Q ss_pred             h
Q psy3619         358 I  358 (418)
Q Consensus       358 ~  358 (418)
                      .
T Consensus       213 ~  213 (413)
T 3rsj_A          213 E  213 (413)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=86.10  E-value=0.39  Score=38.60  Aligned_cols=40  Identities=28%  Similarity=0.879  Sum_probs=29.7

Q ss_pred             CCCcCccceecCCCCCC---CCCCCCcEEEeCCCCeEEeCCCCcC
Q psy3619         163 VGYTGVMCETNIDDCKS---NPCLNGGICRDGVAKFTCDCPPGWT  204 (418)
Q Consensus       163 ~G~~g~~C~~~~~~C~~---~~C~~~~~C~~~~~~~~C~C~~G~~  204 (418)
                      .||.......++++|..   .+|.  +.|.+..++|.|.|++||.
T Consensus       106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~  148 (159)
T 1nzi_A          106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF  148 (159)
T ss_dssp             CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred             ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence            46655554457788875   2454  5899999999999999997

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=85.58  E-value=0.26  Score=49.42  Aligned_cols=31  Identities=13%  Similarity=0.181  Sum_probs=27.7

Q ss_pred             CCcccccCCC--ccccccCCCCcCccceeeecc
Q psy3619           2 CDQKTLWTPS--SLVPDCVSEDTQQADYHIVAS   32 (418)
Q Consensus         2 C~~~C~~~~g--~~~C~C~~G~~~~~~~~~c~~   32 (418)
                      |+|+|.++|.  +|.|.|++||.+..|+++|.+
T Consensus       282 Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          282 CSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             ccceEECCCCCCCceEeCCchheecccCcccCC
Confidence            8999999884  799999999999999988864

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=83.33  E-value=0.99  Score=39.95  Aligned_cols=48  Identities=35%  Similarity=0.852  Sum_probs=34.6

Q ss_pred             eeecCCCCcCccceecCC---------CCCCC----CCCCCcEEEeCCCCeEEeCCCCc------CCCCcC
Q psy3619         158 QCECNVGYTGVMCETNID---------DCKSN----PCLNGGICRDGVAKFTCDCPPGW------TGSRCE  209 (418)
Q Consensus       158 ~C~C~~G~~g~~C~~~~~---------~C~~~----~C~~~~~C~~~~~~~~C~C~~G~------~G~~C~  209 (418)
                      .|.|.+||+|..|+-..+         .|...    .|...|.|+-.    .|.|..++      .|..|+
T Consensus       208 ~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~~G~~~~  274 (280)
T 2p26_A          208 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE  274 (280)
T ss_dssp             EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTTCEEESTTSC
T ss_pred             ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCCeeEeeEecc
Confidence            789999999999874332         57532    48888899864    69997765      466665

>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...

Probab=82.78  E-value=6  Score=39.41  Aligned_cols=77  Identities=13%  Similarity=0.175  Sum_probs=52.8

Q ss_pred             cCCCceEEEEEEeCCEEEEEEcCeeec-cceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChh
Q psy3619         277 NDGQWHHVAIVWTQGTLTLITEGLIAG-KVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFT  355 (418)
Q Consensus       277 ~dg~WH~v~v~~~~~~~~l~vD~~~~~-~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~  355 (418)
                      .-++-|+|.|..+++.++++||+.... ................+|||+......    .++..=-+++|.|-+|+|+..
T Consensus       554 e~~~~~qv~l~l~~~~~s~yvdg~~~~~~~~~~~~~~~~~~ishfy~g~~~~~~~----~~~~~vtv~nv~lynr~l~~~  629 (648)
T 1ms9_A          554 EMGKRYHVVLTMANKIGSVYIDGEPLEGSGQTVVPDERTPDISHFYVGGYKRSGM----PTDSRVTVNNVLLYNRQLNAE  629 (648)
T ss_dssp             CTTCEEEEEEEEETTEEEEEETTEECTTCCEECSCSSCCCCCCEEEESSCSCTTS----CCCCCEEEEEEEEESSCCCHH
T ss_pred             cCCcceEEEEEEeCCcEEEEECCEEecCCcccccccCCCcccceEEEcCCCCCCc----ccCCCEEEEEeeEecCCCCHH
Confidence            446788999999888999999998652 222233333444557899998654331    123445789999999999865


Q ss_pred             hh
Q psy3619         356 NE  357 (418)
Q Consensus       356 ~~  357 (418)
                      +.
T Consensus       630 e~  631 (648)
T 1ms9_A          630 EI  631 (648)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=82.68  E-value=0.47  Score=47.42  Aligned_cols=46  Identities=24%  Similarity=0.559  Sum_probs=38.4

Q ss_pred             ecCCCCcCccceecCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcC
Q psy3619         160 ECNVGYTGVMCETNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD  211 (418)
Q Consensus       160 ~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~  211 (418)
                      .|.+||+|..|.. ...|.. .|..+|.|++.    .|.|.+||.|..|...
T Consensus       521 ~C~~gw~g~dc~i-~~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~~~  566 (725)
T 2e26_A          521 DKQQTWAIDNVYI-GDGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCDEP  566 (725)
T ss_dssp             CTTCCEEEEEEEE-ESCSSG-GGGGSEEEETT----EEEECTTEESTTSCEE
T ss_pred             ccCCCcccccccc-cCCCCc-ccCCCcEECCC----CEeeCCCccCCCcCcc
Confidence            6899999999972 356664 69999999986    6999999999999754

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=82.54  E-value=0.26  Score=49.20  Aligned_cols=45  Identities=24%  Similarity=0.530  Sum_probs=36.9

Q ss_pred             ecCCCCccCCCccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCcccc
Q psy3619          82 SCDLGFTGKHCQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA  132 (418)
Q Consensus        82 ~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~  132 (418)
                      .|.+||.|+.|.. ...|.. .|..++.|++    -.|.|.+||+|..|..
T Consensus       521 ~C~~gw~g~dc~i-~~~Cp~-~C~ghG~C~~----G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          521 DKQQTWAIDNVYI-GDGCLD-MCSGHGRCVQ----GSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CTTCCEEEEEEEE-ESCSSG-GGGGSEEEET----TEEEECTTEESTTSCE
T ss_pred             ccCCCcccccccc-cCCCCc-ccCCCcEECC----CCEeeCCCccCCCcCc
Confidence            6899999999971 256754 6999999997    2799999999999974

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=82.31  E-value=2.9  Score=29.64  Aligned_cols=68  Identities=16%  Similarity=0.280  Sum_probs=43.3

Q ss_pred             CCCCCCCCCCCeeecC-CCCeeeeCCCCcc--CCccccCC-CcCCCCCCCCCCcceeecCC-CCeeeecCCCC
Q psy3619          98 DCASEPCQNGGSCVDM-LDGFMCQCRPGFV--GLQCEADI-DECLSDPCSPEGTDKCLDLD-NKFQCECNVGY  165 (418)
Q Consensus        98 ~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~--g~~C~~~~-~~C~~~~c~~~~~~~C~~~~-~~~~C~C~~G~  165 (418)
                      .|....|+.++.|... .+.-+|.|..+|.  +..|..+. ..|..+.-.+...+.|.... ..-.|.|...+
T Consensus         6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~   78 (95)
T 1b9w_A            6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG   78 (95)
T ss_dssp             SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred             ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence            4555678899999885 4678999999998  66675332 34554432333334466555 55677776664

>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...

Probab=81.27  E-value=4.6  Score=42.02  Aligned_cols=72  Identities=13%  Similarity=0.149  Sum_probs=50.6

Q ss_pred             CCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChhhh
Q psy3619         279 GQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTNE  357 (418)
Q Consensus       279 g~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~~  357 (418)
                      ++||+|.|+-+.+.+.+.+||....... -.....+-....+.+|.....      +..|.+.|++|+|-+++|+-.+.
T Consensus       999 NkW~fVTItndlg~~~IYING~Li~~~~-I~~L~dI~ss~~I~fglvn~~------D~~~~i~Id~f~IfnkeLt~~EI 1070 (1290)
T 1epw_A          999 NRWFFVTITNNLNNAKIYINGKLESNTD-IKDIREVIANGEIIFKLDGDI------DRTQFIWMKYFSIFNTELSQSNI 1070 (1290)
T ss_dssp             TSCEEEEEEECSSEEEEEETTEEEEEEE-CSSCCCCCCCSEEEEEEEESC------CTTCCEEEEEEEEESSCCCHHHH
T ss_pred             CceEEEEEEecCCceEEEECCEEeechh-hhhhhceeecceEEEEeccCC------CCCceeeEeeEEEecCcCCHHHH
Confidence            8999999999988999999997765542 212223333555555532222      25589999999999999986544

>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1

Probab=81.03  E-value=0.35  Score=43.20  Aligned_cols=29  Identities=14%  Similarity=0.149  Sum_probs=25.5

Q ss_pred             CCcccccCCCccccccCCCCcCccceeee
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIV   30 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c   30 (418)
                      |+|.|.|..|+|.|.|.+||.+..+...|
T Consensus       133 c~~~C~n~~g~~~csC~~Gy~L~~d~~~C  161 (286)
T 1nt0_A          133 CDHYCHXYLGGYYCSCRVGYILHQNKHTC  161 (286)
T ss_dssp             CSSEEEEETTEEEEECCTTEEECTTSSCE
T ss_pred             CCCccccccCceEeecCCCceeccCCCCc
Confidence            88999999999999999999987665444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	418
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	4e-13
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	9e-12
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	2e-08
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	2e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	1e-12
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	5e-11
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	7e-08
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	2e-05
d1haea_	63	g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Hu	2e-12
d1haea_	63	g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Hu	5e-11
d1haea_	63	g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Hu	8e-08
d1haea_	63	g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Hu	1e-04
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	3e-12
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	5e-11
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	7e-08
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	3e-05
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	4e-12
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	7e-11
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	1e-07
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	2e-05
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	1e-11
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	1e-10
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	1e-06
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	2e-05
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	2e-11
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	4e-10
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	2e-06
d1g1ta2	39	g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human	1e-05
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	2e-10
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	6e-09
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	3e-07
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	5e-05
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	3e-10
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	2e-09
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	1e-05
d1g1sa2	40	g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human	1e-05
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	3e-09
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	1e-07
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	2e-05
d1autl1	48	g.3.11.1 (L:49-96) Activated protein c (autoprothr	2e-04
d1tpga1	41	g.3.11.1 (A:51-91) Plasminogen activator (tissue-t	6e-09
d1tpga1	41	g.3.11.1 (A:51-91) Plasminogen activator (tissue-t	3e-08
d1tpga1	41	g.3.11.1 (A:51-91) Plasminogen activator (tissue-t	3e-05
d1nqlb_	48	g.3.11.1 (B:) Epidermal growth factor, EGF {Human	7e-09
d1nqlb_	48	g.3.11.1 (B:) Epidermal growth factor, EGF {Human	2e-06
d1nqlb_	48	g.3.11.1 (B:) Epidermal growth factor, EGF {Human	3e-05
d1q4ga2	42	g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EG	2e-08
d1q4ga2	42	g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EG	9e-07
d1q4ga2	42	g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EG	3e-04
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	2e-08
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	2e-06
d3egfa_	53	g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse	1e-04
d2slia1	196	b.29.1.9 (A:81-276) Leech intramolecular trans-sia	2e-08
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	3e-08
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	2e-06
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	0.002
d1b09a_	206	b.29.1.5 (A:) C-reactive protein (CRP) {Human (Hom	1e-07
d1saca_	204	b.29.1.5 (A:) Serum amyloid P component (SAP) {Hum	4e-07
d1a8da1	247	b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium	7e-07
d1epwa1	218	b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostr	1e-06
d1ioxa_	50	g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens)	2e-05
d1ioxa_	50	g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens)	9e-04
d1moxc_	49	g.3.11.1 (C:) Transforming growth factor alpha {Hu	9e-05
d1k36a_	46	g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo	1e-04
d1k36a_	46	g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo	0.003
d1dyka1	189	b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse	1e-04
d3btaa1	207	b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostr	1e-04
d2erfa1	206	b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal do	0.001
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	0.001
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	0.002
d1dyka2	185	b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse	0.002

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (148), Expect = 4e-13
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD 211
           +++C SNPC N   C D + +F C C PG+ G  CE +
Sbjct: 1   VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (138), Expect = 9e-12
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEAD 133
           +++C S PCQN  +C+D +  F C C PG+ G+ CE +
Sbjct: 1   VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 134 IDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETN 173
           ++EC+S+PC  + T  CLD   +FQC C  GY GV CE N
Sbjct: 1   VNECVSNPCQNDAT--CLDQIGEFQCICMPGYEGVHCEVN 38

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQH 94
           TC D +G F C C  G+ G HC+ 
Sbjct: 13 ATCLDQIGEFQCICMPGYEGVHCEV 37

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           + D C+SNPCLNGG C+D +  + C CP G+ G  CE
Sbjct: 2   DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (133), Expect = 5e-11
 Identities = 18/36 (50%), Positives = 21/36 (58%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
            D C S PC NGGSC D ++ + C C  GF G  CE
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 7e-08
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE 171
           D D+C S+PC   G+  C D  N ++C C  G+ G  CE
Sbjct: 2   DGDQCESNPCLNGGS--CKDDINSYECWCPFGFEGKNCE 38

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G+C D +  + C C  GF GK+C+
Sbjct: 15 GSCKDDINSYECWCPFGFEGKNCE 38

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 2e-12
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 172 TNIDDCKSNPCLNGGICR-----DGVAKFTCDCPPGWTGSRCEKDIGSCTNMPCQND 223
               + +   C+NGG C         +++ C C PG+TG+RC +++        + +
Sbjct: 4   VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAE 60

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 5e-11
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 96  IDDCASEPCQNGGSC-----VDMLDGFMCQCRPGFVGLQCEADIDECLSDPCSPE 145
             +     C NGG C     +     ++C+C+PGF G +C  ++   + +    E
Sbjct: 6   CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKAE 60

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 8e-08
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 3/53 (5%)

Query: 133 DIDECLSDPCSPEGT---DKCLDLDNKFQCECNVGYTGVMCETNIDDCKSNPC 182
              E     C   G     K L   +++ C+C  G+TG  C  N+     N  
Sbjct: 5   KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 7/39 (17%), Positives = 10/39 (25%)

Query: 68  IPGTCTDLVGGFSCSCDLGFTGKHCQHLIDDCASEPCQN 106
                      + C C  GFTG  C   +        + 
Sbjct: 21  FMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQEKA 59

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 58.6 bits (142), Expect = 3e-12
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
            D C S+PC NGG C+D +  + C C P + G  CE
Sbjct: 2   GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 55.1 bits (133), Expect = 5e-11
 Identities = 21/36 (58%), Positives = 23/36 (63%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
            D CAS PCQNGGSC D L  ++C C P F G  CE
Sbjct: 2   GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 46.2 bits (110), Expect = 7e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 133 DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE 171
           D D+C S PC   G+  C D    + C C   + G  CE
Sbjct: 1   DGDQCASSPCQNGGS--CKDQLQSYICFCLPAFEGRNCE 37

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G+C D +  + C C   F G++C+
Sbjct: 14 GSCKDQLQSYICFCLPAFEGRNCE 37

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (141), Expect = 4e-12
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           D C+++PC N G C+DG+ ++TC C  G+ G  CE
Sbjct: 1   DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE 35

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (132), Expect = 7e-11
 Identities = 17/35 (48%), Positives = 19/35 (54%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
           D C + PCQN G C D L  + C C  GF G  CE
Sbjct: 1   DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE 35

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETN 173
           D+C + PC  +G   C D   ++ C C  G+ G  CE  
Sbjct: 1   DQCETSPCQNQGK--CKDGLGEYTCTCLEGFEGKNCELF 37

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G C D +G ++C+C  GF GK+C+
Sbjct: 12 GKCKDGLGEYTCTCLEGFEGKNCE 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (137), Expect = 1e-11
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
           D+C S+PCL+ G C D + +F C+CP G+TG  C+
Sbjct: 1   DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
           D+CAS PC + G C+D ++ F C+C  GF G  C+
Sbjct: 1   DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCE 171
           DEC S PC   G   CLD  N+FQCEC  G+TG +C+
Sbjct: 1   DECASSPCLHNGR--CLDKINEFQCECPTGFTGHLCQ 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 12/24 (50%), Positives = 13/24 (54%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G C D +  F C C  GFTG  CQ
Sbjct: 12 GRCLDKINEFQCECPTGFTGHLCQ 35

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (135), Expect = 2e-11
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDI 212
             C +  C   G C + +  +TC C PG++G +CE+ +
Sbjct: 2   AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (126), Expect = 4e-10
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADI 134
             C +  C   G CV+ ++ + C+C PGF GL+CE  +
Sbjct: 2   AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNI 174
             C +  CS  G   C++  N + C+C+ G++G+ CE  +
Sbjct: 2   AACTNTSCSGHGE--CVETINNYTCKCDPGFSGLKCEQIV 39

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQHLI 96
          G C + +  ++C CD GF+G  C+ ++
Sbjct: 13 GECVETINNYTCKCDPGFSGLKCEQIV 39

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 2e-10
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 174 IDDC--KSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD 211
           +D+C   +NPC + G C + +  F C C  G+TG RCE D
Sbjct: 3   VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (117), Expect = 6e-09
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 96  IDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEAD 133
           +D+C+  + PC++ G C++ L  F CQC  G+ G +CE D
Sbjct: 3   VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)

Query: 133 DIDECL--SDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETN 173
           D+DEC   ++PC   G   C++    F+C+C  GYTG  CE +
Sbjct: 2   DVDECSLGANPCEHAGK--CINTLGSFECQCLQGYTGPRCEID 42

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 5e-05
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQ 93
          G C + +G F C C  G+TG  C+
Sbjct: 17 GKCINTLGSFECQCLQGYTGPRCE 40

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (127), Expect = 3e-10
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE 209
             C+   C   G C + +  +TC C PG+ G  CE
Sbjct: 2   ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 36

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (121), Expect = 2e-09
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 97  DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE 131
             C    C   G C++ +  + C C PGF G +CE
Sbjct: 2   ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 36

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQHLID 97
          G C + +G ++CSC  GF G  C+++ D
Sbjct: 13 GECLETIGNYTCSCYPGFYGPECEYVRD 40

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 135 DECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID 175
             C    CS +G   CL+    + C C  G+ G  CE   D
Sbjct: 2   ASCQDMSCSKQGE--CLETIGNYTCSCYPGFYGPECEYVRD 40

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (121), Expect = 3e-09
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG 213
              C S  C +G  C DG+  F+CDC  GW G  C++++ 
Sbjct: 8   EHPCASLCCGHGT-CIDGIGSFSCDCRSGWEGRFCQREVS 46

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 1e-07
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 95  LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEADID 135
           L   CAS  C +G  C+D +  F C CR G+ G  C+ ++ 
Sbjct: 7   LEHPCASLCCGHGT-CIDGIGSFSCDCRSGWEGRFCQREVS 46

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 5/49 (10%)

Query: 129 QCEA--DIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID 175
           QC        C S  C   GT  C+D    F C+C  G+ G  C+  + 
Sbjct: 1   QCLVLPLEHPCASLCCG-HGT--CIDGIGSFSCDCRSGWEGRFCQREVS 46

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 70 GTCTDLVGGFSCSCDLGFTGKHCQHLID 97
          GTC D +G FSC C  G+ G+ CQ  + 
Sbjct: 19 GTCIDGIGSFSCDCRSGWEGRFCQREVS 46

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (117), Expect = 6e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 177 CKSNPCLNGGICRDGV--AKFTCDCPPGWTGSRCEKDI 212
           C    C NGG C+  +  + F C CP G+ G  CE D 
Sbjct: 1   CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 38

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (113), Expect = 3e-08
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 99  CASEPCQNGGSCVDMLDG--FMCQCRPGFVGLQCEADIDE 136
           C+   C NGG+C   L    F+CQC  GF G  CE D   
Sbjct: 1   CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 137 CLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCETNID 175
           C    C   GT +     + F C+C  G+ G  CE +  
Sbjct: 1   CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (117), Expect = 7e-09
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 171 ETNIDDCKSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCE 209
           ++         CL+ G+C   + + K+ C+C  G+ G RC+
Sbjct: 1   DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 41

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 96  IDDCASEPCQNGGSC--VDMLDGFMCQCRPGFVGLQCEADIDEC 137
                   C + G C  ++ LD + C C  G++G +C+    + 
Sbjct: 4   CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKW 47

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Length = 48

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 3e-05
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 131 EADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCET 172
           +++        C  +G    ++  +K+ C C VGY G  C+ 
Sbjct: 1   DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 42

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 47.9 bits (114), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 174 IDDCKSNPCLNGGICRD-GVAKFTCDCPP-GWTGSRCEK 210
           ++ C   PC + GIC   G+ ++ CDC   G++G  C  
Sbjct: 2   VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 43.3 bits (102), Expect = 9e-07
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 96  IDDCASEPCQNGGSCVDM-LDGFMCQCRP-GFVGLQCE 131
           ++ C   PCQ+ G CV   LD + C C   G+ G  C 
Sbjct: 2   VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 36.0 bits (83), Expect = 3e-04
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 134 IDECLSDPCSPEGTDKCLDLD-NKFQCEC-NVGYTGVMCET 172
           ++ C   PC  +G   C+    +++QC+C   GY+G  C  
Sbjct: 2   VNPCCYYPCQHQGI--CVRFGLDRYQCDCTRTGYSGPNCTI 40

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.3 bits (115), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 170 CETNIDDCKSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCE 209
                       CLNGG+C   + +  +TC+C  G++G RC+
Sbjct: 2   SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 97  DDCASEPCQNGGSC--VDMLDGFMCQCRPGFVGLQCE 131
                  C NGG C  ++ LD + C C  G+ G +C+
Sbjct: 7   PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 130 CEADIDECLSDPCSPEGTDKCLDLDNKFQCECNVGYTGVMCET 172
                       C   G    ++  + + C C +GY+G  C+T
Sbjct: 2   SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44

>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Length = 196

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Leech intramolecular trans-sialidase, N-terminal domain
domain: Leech intramolecular trans-sialidase, N-terminal domain
species: North american leech (Macrobdella decora) [TaxId: 6405]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 275 TINDGQWHHVAIVW--TQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKA 332
              +  ++ VA+          L   G +   + +  + K +     V          + 
Sbjct: 104 YKGERVFNTVALKADAANKQCRLFANGELLATL-DKDAFKFISDITGVDNVTLGGTKRQG 162

Query: 333 YTEAGFEGKLTKVQIWNRALDFTNEIQK 360
                F G +  +++++ AL    E+ +
Sbjct: 163 KIAYPFGGTIGDIKVYSNALS-DEELIQ 189

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.5 bits (113), Expect = 3e-08
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 175 DDCKSNPCLNGGICRD-GVAKFTCDCP-PGWTGSRCEK 210
           + C SNPC N G C   G  ++ CDC   G+ G  C  
Sbjct: 2   NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 97  DDCASEPCQNGGSCVDM-LDGFMCQC-RPGFVGLQCE 131
           + C S PCQN G C+    D + C C R GF G  C 
Sbjct: 2   NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 135 DECLSDPCSPEGTDKCLDLD-NKFQCEC-NVGYTGVMCET 172
           + C S+PC   G   C+    ++++C+C   G+ G  C T
Sbjct: 2   NPCCSNPCQNRGE--CMSTGFDQYKCDCTRTGFYGENCTT 39

>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Length = 206

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Pentraxin (pentaxin)
domain: C-reactive protein (CRP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-07
 Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 11/120 (9%)

Query: 274 ATINDGQWHHVAIVW--TQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
                    H+   W    G +    +G    + ++   G ++     ++LG+ +     
Sbjct: 86  VPEVTVAPVHICTSWESASGIVEFWVDGKPRVR-KSLKKGYTVGAEASIILGQEQDSFGG 144

Query: 332 AYTEAG-FEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGV 389
            +  +    G +  V +W+  L   +EI              +  VL W     ++ G V
Sbjct: 145 NFEGSQSLVGDIGNVNMWDFVLS-PDEINTIYLGGP-----FSPNVLNWRALKYEVQGEV 198

>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Pentraxin (pentaxin)
domain: Serum amyloid P component (SAP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 4e-07
 Identities = 18/119 (15%), Positives = 31/119 (26%), Gaps = 9/119 (7%)

Query: 274 ATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
                    H+ + W    G       G    K           Q   V+  +      K
Sbjct: 84  VIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQGYFVEAQPKIVLGQEQDSYGGK 143

Query: 332 AYTEAGFEGKLTKVQIWNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGV 389
                 F G++  + +W+  L     I    +            +L W   + +I G V
Sbjct: 144 FDRSQSFVGEIGDLYMWDSVLP-PENILSAYQGTP-----LPANILDWQALNYEIRGYV 196

>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Length = 247

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Tetanus neurotoxin
species: Clostridium tetani [TaxId: 1513]

 Score = 47.9 bits (113), Expect = 7e-07
 Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 9/87 (10%)

Query: 275 TINDGQWHHVAIVWTQ-GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
                +W  + I   +  +  L   G++ G         ++ +   + L   R +N    
Sbjct: 162 AYLANKWVFITITNDRLSSANLYINGVLMGS-AEITGLGAIREDNNITLKLDRCNN---- 216

Query: 334 TEAGFEGKLTKVQIWNRALDFTNEIQK 360
                   + K +I+ +AL+   EI+K
Sbjct: 217 --NNQYVSIDKFRIFCKALN-PKEIEK 240

>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype B [TaxId: 1491]

 Score = 46.9 bits (110), Expect = 1e-06
 Identities = 9/87 (10%), Positives = 23/87 (26%), Gaps = 8/87 (9%)

Query: 274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
            +    +W  V I        +   G +    +       +   G ++       +    
Sbjct: 133 ISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EVIANGEIIFKLDGDID---- 187

Query: 334 TEAGFEGKLTKVQIWNRALDFTNEIQK 360
                   +    I+N  L   + I++
Sbjct: 188 --RTQFIWMKYFSIFNTELS-QSNIEE 211

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)

Query: 175 DDCKSNPCLNGGIC-RDGVAKFTCDCPPGWTGSRCEK 210
                + C+ G           +C C  G+ G+RCE+
Sbjct: 9   PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 9e-04
 Identities = 9/36 (25%), Positives = 12/36 (33%), Gaps = 1/36 (2%)

Query: 97  DDCASEPCQNGGSC-VDMLDGFMCQCRPGFVGLQCE 131
                  C  G    V       C C  G++G +CE
Sbjct: 9   PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 49

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 175 DDCKSNPCLNGGIC-RDGVAKFTCDCPPGWTGSRCE 209
            D  +  C +G         K  C C  G+ G+RCE
Sbjct: 8   PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 46

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 172 TNIDDCKSNPCLNGGICRD-GVAKFTCDCPPGWTGSRCE 209
           T      +  CL+G       +++  C C  G+TG RCE
Sbjct: 4   TKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Length = 46

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 97  DDCASEPCQNGGSC-VDMLDGFMCQCRPGFVGLQCE 131
               +  C +G    +  +    C+C  G+ G++CE
Sbjct: 7   SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42

>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 189

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Laminin alpha2 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 3/94 (3%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY- 333
            INDGQWH + IV  +    L  +   +  +    +          V G P     +   
Sbjct: 94  KINDGQWHKIKIVRVKQEGILYVDDASSQTISPKKADILDVVGILYVGGLPINYTTRRIG 153

Query: 334 -TEAGFEGKLTKVQIWNRALDFTNEIQKQ-VRDC 365
                 +G +  + +    +D         V  C
Sbjct: 154 PVTYSLDGCVRNLHMEQAPVDLDQPTSSFHVGTC 187

>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Length = 207

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 6/81 (7%), Positives = 21/81 (25%), Gaps = 8/81 (9%)

Query: 273 YATINDGQWHHVAIVWT-QGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIK 331
             +    +W  V I         +   G +  +      G ++     ++       +  
Sbjct: 134 NISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NIHASNNIMFKLDGCRD-- 190

Query: 332 AYTEAGFEGKLTKVQIWNRAL 352
                     +    ++++ L
Sbjct: 191 ----THRYIWIKYFNLFDKEL 207

>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 206

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Thrombospondin 1 N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY 333
           A +  GQW  + +   +    L  +       E     +S+       + + R    K  
Sbjct: 119 ALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLR--IAKGG 176

Query: 334 TEAGFEGKLTKVQ-IWNRALD 353
               F+G L  V+ ++    +
Sbjct: 177 VNDNFQGVLQNVRFVFGTTPE 197

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 172 TNIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGS 206
            ++D+CK       G C +    + C+CP G+  +
Sbjct: 3   VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILA 37

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 96  IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVG 127
           +D+C        G C++    + C+C  G++ 
Sbjct: 5   MDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36

>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 185

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Laminin alpha2 chain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 4/82 (4%)

Query: 275 TINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY- 333
            + +GQWH V     +  L L+ +G          +  S      V +G   P  +  + 
Sbjct: 83  HMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGG-FPGGLNQFG 141

Query: 334 --TEAGFEGKLTKVQIWNRALD 353
             T   F G +  +++      
Sbjct: 142 LTTNIRFRGCIRSLKLTKGTGK 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	418
d1dyka1	189	Laminin alpha2 chain {Mouse (Mus musculus) [TaxId:	99.6
d1pz7a_	195	Agrin {Chicken (Gallus gallus) [TaxId: 9031]}	99.57
d1d2sa_	170	Sex hormone-binding globulin {Human (Homo sapiens)	99.46
d1dyka2	185	Laminin alpha2 chain {Mouse (Mus musculus) [TaxId:	99.43
d1h30a1	191	Growth-arrest-specific protein Gas6 {Human (Homo s	99.41
d2r1da1	177	Ligand-binding domain of neurexin 1beta {Rat (Ratt	99.39
d1h30a2	218	Growth-arrest-specific protein Gas6 {Human (Homo s	99.35
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	99.0
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.95
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.95
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.92
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.92
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.91
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.91
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.87
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.86
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.84
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.83
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.79
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.79
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.78
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.77
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.75
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.67
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.63
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.61
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.6
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.56
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.56
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.56
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.53
d1nt0a3	45	Mannose-binding protein associated serine protease	98.5
d1szba2	45	Mannose-binding protein associated serine protease	98.46
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.43
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.42
d1b09a_	206	C-reactive protein (CRP) {Human (Homo sapiens) [Ta	98.4
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.37
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.32
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.32
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.29
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.27
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.27
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d1saca_	204	Serum amyloid P component (SAP) {Human (Homo sapie	98.25
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.19
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	98.19
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.18
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	98.15
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	98.15
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.09
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.07
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.03
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	98.03
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.98
d1nt0a3	45	Mannose-binding protein associated serine protease	97.91
d1szba2	45	Mannose-binding protein associated serine protease	97.91
d2erfa1	206	Thrombospondin 1 N-terminal domain {Human (Homo sa	97.84
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	97.82
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.81
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.8
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.76
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.76
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.7
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.67
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.63
d2slia1	196	Leech intramolecular trans-sialidase, N-terminal d	97.58
d1epwa1	218	Botulinum neurotoxin {Clostridium botulinum, serot	97.55
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.5
d1a8da1	247	Tetanus neurotoxin {Clostridium tetani [TaxId: 151	97.38
d3btaa1	207	Botulinum neurotoxin {Clostridium botulinum, serot	97.29
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	97.2
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	97.08
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.97
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.83
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.6
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.38
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	96.35
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.22
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.17
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.0
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.71
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.59
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	95.54
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	94.96
d2ah2a1	225	Trypanosoma sialidase, C-terminal domain {Parasiti	94.55
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	94.2
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	94.06
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	93.42
d1n1ta1	222	Trypanosoma sialidase, C-terminal domain {Trypanos	93.41
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	93.22
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	92.89
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	92.69
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	92.23
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	89.38
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	89.25
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	86.68
d1oq1a_	223	Hypothetical protein YesU {Bacillus subtilis [TaxI	84.77

>d1dyka1 b.29.1.4 (A:2744-2932) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Laminin alpha2 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=3.8e-15  Score=125.47  Aligned_cols=108  Identities=17%  Similarity=0.189  Sum_probs=79.1

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+.+.  .+.....+.+..+++||+||+|.|.|.++.++|+||+...... ..+....++..+.||||+.+.
T Consensus        69 l~l~~G~l~~~~~--~g~~~~~~~~~~~v~Dg~WH~V~v~~~~~~~~l~VD~~~~~~~-~~~~~~~l~~~~~lyiGG~p~  145 (189)
T d1dyka1          69 VQLRNGFPYFSYD--LGSGDTSTMIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTI-SPKKADILDVVGILYVGGLPI  145 (189)
T ss_dssp             EEEETTEEEEEEE--SSSCEEEEECCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEE-CSTTCCCCCCCSEEEESSCCT
T ss_pred             EEEECCEEEEEEE--CCCccEEecCCcEeeCCCEEEEEEEEcccEEEEEECCcceeeE-ccCcccccccccceEEecccc
Confidence            3334444444443  3445556667789999999999999999999999999765443 355667788889999988654


Q ss_pred             CCCC-Cc--cCCCceEEeeeEEecCeecChhhhh
Q psy3619         328 DNIK-AY--TEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       328 ~~~~-~~--~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      .... ..  ...+|+|||++|+||++.++|.++.
T Consensus       146 ~~~~~~~~~~~~~F~GCi~~v~in~~~~~L~~~~  179 (189)
T d1dyka1         146 NYTTRRIGPVTYSLDGCVRNLHMEQAPVDLDQPT  179 (189)
T ss_dssp             TCCCCSSCSCCSBCSEEEEEEEESSSCCCTTSCS
T ss_pred             cccccccCcCCCCcEEEEeEEEECCEEecCCCcc
Confidence            3322 21  2368999999999999999996654

>d1pz7a_ b.29.1.4 (A:) Agrin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Agrin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.57  E-value=8.2e-15  Score=124.05  Aligned_cols=109  Identities=16%  Similarity=0.129  Sum_probs=80.4

Q ss_pred             EEecccCcEEEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCC
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRP  327 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~  327 (418)
                      +.+....+.+.+..+  ...+.+.+..+++||+||+|.|.|.++.++|+||+........+.....|+..+.||||+.+.
T Consensus        74 l~L~~G~l~~~~~~g--~~~~~~~~~~~v~dg~wh~V~i~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~lyiGG~p~  151 (195)
T d1pz7a_          74 LAIVDGFVQMMYDLG--SKPVVLRSTVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMER  151 (195)
T ss_dssp             EEEETTEEEEEEESS--SCCEEEEEEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSC
T ss_pred             EEEECCEEEEEEEcC--CCCEEEeCCceecCCCEEEEEEEEcCcEEEEEEeccceeeeeCCCCceeeecCCceEEccccc
Confidence            334444444444443  444556677889999999999999999999999987666555566667788889999998654


Q ss_pred             CCCCC-c---cCCCceEEeeeEEecCeecChhhhh
Q psy3619         328 DNIKA-Y---TEAGFEGKLTKVQIWNRALDFTNEI  358 (418)
Q Consensus       328 ~~~~~-~---~~~~F~GCi~~l~in~~~l~l~~~~  358 (418)
                      ..... .   ...+|+|||++|+||++.|+|.+.+
T Consensus       152 ~~~~~~~~~~~~~~F~GCI~~l~in~~~l~l~~~~  186 (195)
T d1pz7a_         152 LSVAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDA  186 (195)
T ss_dssp             CSTTTTSCGGGGSBCEEEEEEEEETTEECCTTTSC
T ss_pred             ccccccccccCcCCCEEEEEEEEECCEECCCchHh
Confidence            32221 1   2368999999999999999996544

>d1d2sa_ b.29.1.4 (A:) Sex hormone-binding globulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Sex hormone-binding globulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.3e-13  Score=113.78  Aligned_cols=102  Identities=14%  Similarity=0.143  Sum_probs=73.0

Q ss_pred             EEeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCc--c
Q psy3619         257 VSLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAY--T  334 (418)
Q Consensus       257 l~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~--~  334 (418)
                      +.+....+.....+.+...++||+||+|.|.|.++.++|+||+.......    ...+.....||||+.+.......  .
T Consensus        64 l~~~~~~g~~~~~~~s~~~~~dg~WH~V~i~~~~~~~~L~VD~~~~~~~~----~~~~~~~~~lyiGG~p~~~~~~~~~~  139 (170)
T d1d2sa_          64 PEIQLHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLR----QVSGHPIMRIALGGLLFPASNLRLPL  139 (170)
T ss_dssp             EEEEEESSSCEEEEECSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEET----TCCCCCEEEEEESSCSSCGGGSSSCC
T ss_pred             EEEEEeCCCcceEEecccccCCCceEEEEEEEECCEEEEEECCeeeEeee----cCCCccCCeEEEccccCccccccCcC
Confidence            33333444455566678899999999999999999999999997655432    23345567899998665433322  2


Q ss_pred             CCCceEEeeeEEecCeecChhhhhhhcC
Q psy3619         335 EAGFEGKLTKVQIWNRALDFTNEIQKQV  362 (418)
Q Consensus       335 ~~~F~GCi~~l~in~~~l~l~~~~~~~~  362 (418)
                      ..+|+||||++++++++++|........
T Consensus       140 ~~~F~GCir~~~~~~~~~~l~~~~~~~~  167 (170)
T d1d2sa_         140 VPALDGCLRRDSWLDKQAEISASAPTSL  167 (170)
T ss_dssp             CCCCCEEEEEEEESCGGGEEEEECSSCC
T ss_pred             CCCeEEEECcCEeCCeEeeeeccCCCCC
Confidence            3689999999999999988865443333

>d1dyka2 b.29.1.4 (A:2933-3117) Laminin alpha2 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Laminin alpha2 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=5.8e-13  Score=111.49  Aligned_cols=106  Identities=14%  Similarity=0.105  Sum_probs=73.5

Q ss_pred             EEecccCcEEEeccCccceEEe--eeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEeccc
Q psy3619         248 IQAHSSGVQVSLFPELQDAFLA--FHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKP  325 (418)
Q Consensus       248 ~~~~~~~v~l~~~~~~~~~~~~--~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~  325 (418)
                      +.+....+.+.+..+.+.....  ......++||+||+|.|.|.++.++|+||+..............++....||||+.
T Consensus        54 l~l~~G~l~~~~~~g~~~~~~~~~~~~~~~l~Dg~WH~V~i~~~~~~~~l~vD~~~~~~~~~~~~~~~~~~~~~lyiGG~  133 (185)
T d1dyka2          54 IEMIDEKLMFHVDNGAGRFTAIYDAEIPGHMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGF  133 (185)
T ss_dssp             EEEETTEEEEEEESSSCCEEEEECCCSTTSTTSSSCEEEEEEEETTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCC
T ss_pred             EEEECCeEEEEEECCCCeEEEEEEccCCceecCCCEEEEEEEEcCCEEEEEEeecceeEEeCCCCcceeecCCCEEEeCc
Confidence            3344444444444443332222  23456899999999999999999999999977665554555666777888999887


Q ss_pred             CCCCCCC--ccCCCceEEeeeEEecCeecC
Q psy3619         326 RPDNIKA--YTEAGFEGKLTKVQIWNRALD  353 (418)
Q Consensus       326 ~~~~~~~--~~~~~F~GCi~~l~in~~~l~  353 (418)
                      +......  ....+|+|||++|+||+..+.
T Consensus       134 p~~~~~~~~~~~~~F~GCi~~v~in~~~~~  163 (185)
T d1dyka2         134 PGGLNQFGLTTNIRFRGCIRSLKLTKGTGK  163 (185)
T ss_dssp             CTTCCCTTCSCCCCCEEEEEEEEEECTTSC
T ss_pred             cccccccCccCCCCcEEEeeEEEECCccCc
Confidence            6544322  223689999999999987643

>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Growth-arrest-specific protein Gas6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=4e-13  Score=113.13  Aligned_cols=89  Identities=11%  Similarity=0.026  Sum_probs=61.4

Q ss_pred             EeccCccceEEeeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCC---cccCCCccEEecccCCCCCCC-c
Q psy3619         258 SLFPELQDAFLAFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSG---KSLPQYGWVVLGKPRPDNIKA-Y  333 (418)
Q Consensus       258 ~~~~~~~~~~~~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~---~~l~~~~~l~iG~~~~~~~~~-~  333 (418)
                      .+....+.....+.+...++||+||+|.|.|.++.++|+||+.........+..   ..+.....||||+.+...... .
T Consensus        96 ~~~~~~g~~~~~~~~~~~v~Dg~WH~V~v~r~~~~~~l~VD~~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p~~~~~~~~  175 (191)
T d1h30a1          96 ELQLRYNGVGRVTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQ  175 (191)
T ss_dssp             EEEEEETTEEEEEEEEEECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSS
T ss_pred             EEEEEcCCCcEEecCCccccCCCEEEEEEEEeCCEEEEEECCcceEEEEccCccccccccccCceEEEEeecCccccccc
Confidence            333333444555667789999999999999999999999999766554433332   233345789998865543322 2


Q ss_pred             -cCCCceEEeeeEE
Q psy3619         334 -TEAGFEGKLTKVQ  346 (418)
Q Consensus       334 -~~~~F~GCi~~l~  346 (418)
                       ...+|+||||++.
T Consensus       176 ~~~~~F~GCir~~n  189 (191)
T d1h30a1         176 PINPRLDGCMRSWN  189 (191)
T ss_dssp             CCCCCCCEEEEEEE
T ss_pred             cCCCCCEEeecccC
Confidence             2368999999975

>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Ligand-binding domain of neurexin 1beta
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.39  E-value=9.3e-13  Score=109.40  Aligned_cols=81  Identities=19%  Similarity=0.209  Sum_probs=62.1

Q ss_pred             eeeccccccCCCceEEEEEEeCCEEEEEEcCeeeccce-ecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEe
Q psy3619         269 AFHEYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVE-NYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQI  347 (418)
Q Consensus       269 ~~~s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~-~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~i  347 (418)
                      .+.+...++||+||+|.|.|.++.++|+||+....... .......++....||||+.+.       ..+|+|||++|++
T Consensus        80 ~~~~~~~vnDg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~l~iGG~p~-------~~~F~GCi~~v~~  152 (177)
T d2r1da1          80 IEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQ-------GQPFQGQLSGLYY  152 (177)
T ss_dssp             EECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTT-------TCCCCEEEEEEEE
T ss_pred             EEeCCceecCCCEEEEEEEEECCEEEEEECCeeeEEEecccCccccccccceEEEccCCC-------CCCCEEEEEEEEE
Confidence            44567789999999999999999999999986543332 233445567778999997543       2579999999999


Q ss_pred             cCe-ecChhh
Q psy3619         348 WNR-ALDFTN  356 (418)
Q Consensus       348 n~~-~l~l~~  356 (418)
                      |+. .|+|+.
T Consensus       153 Ng~~~l~la~  162 (177)
T d2r1da1         153 NGLKVLNMAA  162 (177)
T ss_dssp             TTBCHHHHHH
T ss_pred             CCEEHHHHHh
Confidence            994 566654

>d1h30a2 b.29.1.4 (A:461-678) Growth-arrest-specific protein Gas6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Growth-arrest-specific protein Gas6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.2e-12  Score=112.59  Aligned_cols=86  Identities=19%  Similarity=0.184  Sum_probs=64.1

Q ss_pred             ccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecC--------CCcccCCCccEEecccCCCCCCCc-cCCCceEEe
Q psy3619         272 EYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYG--------SGKSLPQYGWVVLGKPRPDNIKAY-TEAGFEGKL  342 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~--------~~~~l~~~~~l~iG~~~~~~~~~~-~~~~F~GCi  342 (418)
                      ....++||+||+|+|.|.++.++|+||+..........        ....++....+|||+.+....... ...+|+|||
T Consensus       105 ~~~~lnDg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lyvGG~P~~~~~~~~~~~~F~GCi  184 (218)
T d1h30a2         105 MEIKVCDGQEHVVTVSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCM  184 (218)
T ss_dssp             EECCTTSSCCEEEEEEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEE
T ss_pred             cccccCCCCeEEEEEEEECCEEEEEEecccceeeeccccccccccccceecccCceeeccCCCCccccccccCCCeeeeE
Confidence            34579999999999999999999999997654432111        112345667899988665433332 337899999


Q ss_pred             eeEEecCeecChhhhh
Q psy3619         343 TKVQIWNRALDFTNEI  358 (418)
Q Consensus       343 ~~l~in~~~l~l~~~~  358 (418)
                       +|+||++.|+|.+.+
T Consensus       185 -~l~in~~~~dl~~~~  199 (218)
T d1h30a2         185 -TLEVNRRLLDLDEAA  199 (218)
T ss_dssp             -EEEETTEECCGGGSS
T ss_pred             -EEEECCEEeccchhh
Confidence             899999999998765

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.1e-10  Score=70.47  Aligned_cols=38  Identities=39%  Similarity=1.149  Sum_probs=33.2

Q ss_pred             CCCCCC--CCCCCCCCeeecCCCCeeeeCCCCccCCcccc
Q psy3619          95 LIDDCA--SEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA  132 (418)
Q Consensus        95 ~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~  132 (418)
                      |||+|+  ++||.++++|+++.++|+|.|++||+|.+|+.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCE
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCcC
Confidence            788887  57899999999999999999999999998863

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.7e-10  Score=67.10  Aligned_cols=37  Identities=43%  Similarity=1.233  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCcccc
Q psy3619          96 IDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA  132 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~  132 (418)
                      ||+|+++||.++++|++..++|+|.|++||+|..|+.
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~   37 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV   37 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCee
Confidence            6888899999999999888889999999999998864

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=6.5e-11  Score=69.93  Aligned_cols=37  Identities=27%  Similarity=0.683  Sum_probs=34.4

Q ss_pred             CCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         363 RDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      +.|.++||.|+|.|+ .|+.|                +|+|++||+|++||+.|
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~----------------~C~C~~g~~G~~Ce~~v   39 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNY----------------TCKCDPGFSGLKCEQIV   39 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEE----------------EEEECTTEESTTSCEEC
T ss_pred             CcccCCcCCCCcEEECCCCCE----------------EEeCCCCCcCcCcCccC
Confidence            579999999999998 89999                99999999999999875

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=5.3e-10  Score=65.77  Aligned_cols=38  Identities=42%  Similarity=1.110  Sum_probs=32.9

Q ss_pred             CCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcC
Q psy3619         174 IDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD  211 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~  211 (418)
                      |++|..+||.++++|++..++|+|.|++||+|+.|+.+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce~d   38 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN   38 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCeeC
Confidence            57888899999999999888999999999999998743

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3.7e-10  Score=66.61  Aligned_cols=37  Identities=49%  Similarity=1.044  Sum_probs=34.1

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      |+|+|.++||.++++|++..++|+|.|++||+|+.|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            6899999999999999999999999999999999986

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.9e-10  Score=67.69  Aligned_cols=37  Identities=27%  Similarity=0.643  Sum_probs=33.6

Q ss_pred             CCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         363 RDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      +.|.++||+|+|.|+ .|+.|                .|+|++||+|++||..+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y----------------~C~C~~G~~G~~Cei~~   38 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEY----------------TCTCLEGFEGKNCELFT   38 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSC----------------CEECCTTEETTTTCEES
T ss_pred             CcCCCCCCCCCcEEECCCCCE----------------EEECCCCCCcCcCeEcc
Confidence            468999999999998 89999                99999999999999654

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.91  E-value=2e-10  Score=66.89  Aligned_cols=37  Identities=57%  Similarity=1.191  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      |+|+|.++||.++++|++..++|+|.|++||+|..|+
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            5788888889888899888888889999998888874

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.1e-09  Score=64.57  Aligned_cols=37  Identities=51%  Similarity=1.269  Sum_probs=32.3

Q ss_pred             cCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcC
Q psy3619         173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      ++++|..+||.++++|++..++|.|.|++||+|+.|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            5788888899999999888888999999999998886

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=1e-09  Score=66.10  Aligned_cols=38  Identities=42%  Similarity=1.143  Sum_probs=32.6

Q ss_pred             cCCCCC--CCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCc
Q psy3619         173 NIDDCK--SNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       173 ~~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      ++++|.  .+||.++++|+++.++|+|.|++||+|++|+.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce~   41 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI   41 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCE
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCcC
Confidence            577887  57899999999999999999999999998874

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.84  E-value=6.8e-10  Score=64.56  Aligned_cols=37  Identities=43%  Similarity=1.115  Sum_probs=31.2

Q ss_pred             cCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcC
Q psy3619         173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      ++++|..+||.++++|++..++|.|.|++||+|.+|+
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            4678888888888888888888888888888888875

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9.3e-10  Score=65.70  Aligned_cols=38  Identities=21%  Similarity=0.587  Sum_probs=32.8

Q ss_pred             CCCCCccCCceEEe---eCCcccccCceeeecCCCCCCccCCCCCCCccccccccCC
Q psy3619         365 CRTEPVLHTGLVLT---WTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVDK  418 (418)
Q Consensus       365 C~~~pc~~~g~c~~---~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~~~~  418 (418)
                      |.++||+|+|+|+.   +..|                +|.|++||+|++||..+.++
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y----------------~C~C~~g~~G~~Ce~~~~~t   41 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDF----------------VCQCPEGFAGKSCEIDTRAT   41 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCE----------------EEECCTTCBSSSCCBCSSCC
T ss_pred             CcCCCCCCCCEEecCCCCCCe----------------EECCCCCCCCCCcCcCcCCC
Confidence            77899999999983   4556                89999999999999988763

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.6e-09  Score=63.73  Aligned_cols=36  Identities=47%  Similarity=1.110  Sum_probs=30.4

Q ss_pred             CCCCCCCCCCCCeeecCCCCeeeeCCCCccCCcccc
Q psy3619          97 DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCEA  132 (418)
Q Consensus        97 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~~  132 (418)
                      |+|+++||.++++|++..++|+|.|++||+|..|++
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Cei   36 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL   36 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTCE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCeE
Confidence            578888888888888888888888888888888864

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=6e-10  Score=66.11  Aligned_cols=36  Identities=33%  Similarity=0.743  Sum_probs=33.5

Q ss_pred             CCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCCCCCCCcccccc
Q psy3619         363 RDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQL  414 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~  414 (418)
                      +.|.++||.|+|.|+ .|+.|                +|+|++||+|++||+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y----------------~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNY----------------TCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSE----------------EEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCe----------------EEeCCCCccCCCCCCC
Confidence            579999999999998 89999                9999999999999975

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.8e-09  Score=61.12  Aligned_cols=35  Identities=46%  Similarity=1.234  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCCCeeecCCCCeeeeCCCCccCCccc
Q psy3619          97 DDCASEPCQNGGSCVDMLDGFMCQCRPGFVGLQCE  131 (418)
Q Consensus        97 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~C~  131 (418)
                      |+|.++||.++++|++..++|+|.|++||+|.+|+
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            56778888888888888888888888888888774

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=4e-09  Score=60.47  Aligned_cols=35  Identities=49%  Similarity=1.311  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcC
Q psy3619         175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       175 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      |+|..+||.++|+|++.+++|.|.|++||+|++||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            56888999999999999999999999999999885

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1e-09  Score=67.51  Aligned_cols=38  Identities=18%  Similarity=0.390  Sum_probs=34.4

Q ss_pred             CCCCCCCCccCCceEE-eeCCcccccCceeeecCCCCCCccCCCCCCCcccccccc
Q psy3619         362 VRDCRTEPVLHTGLVL-TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTV  416 (418)
Q Consensus       362 ~~~C~~~pc~~~g~c~-~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~~  416 (418)
                      .+.|.++||.| |+|. .|+.|                +|+|++||+|++||++|.
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y----------------~C~C~~G~~G~~Ce~~I~   46 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSF----------------SCDCRSGWEGRFCQREVS   46 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCC----------------CEEECTTEESTTSCEECC
T ss_pred             CCcccCCCCCC-CEEECCCCCC----------------eEeCCCCCcCCCcccccC
Confidence            46899999998 7898 89999                999999999999999874

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.8e-09  Score=63.24  Aligned_cols=38  Identities=24%  Similarity=0.759  Sum_probs=32.7

Q ss_pred             CccCCCCCCCCCCCCCCeeecCCCCeeeeCCCCcc--CCcc
Q psy3619          92 CQHLIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV--GLQC  130 (418)
Q Consensus        92 C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~--g~~C  130 (418)
                      |. |||||+..++..++.|+|++|+|.|.|++||+  |..|
T Consensus         2 Cv-DidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g~~C   41 (43)
T d1emoa1           2 AV-DMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC   41 (43)
T ss_dssp             CC-CCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESSSCE
T ss_pred             Cc-ceeccCCcCCCCCCEeECCCCCeEeECCCCcccCCCcc
Confidence            55 89999988888889999999999999999997  4444

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=2.5e-09  Score=62.99  Aligned_cols=37  Identities=32%  Similarity=0.986  Sum_probs=32.7

Q ss_pred             CCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcC
Q psy3619         175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKD  211 (418)
Q Consensus       175 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~  211 (418)
                      +.|..+||.++|+|++.+++|.|.|++||+|+.|+..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce~~   38 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI   38 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcCcc
Confidence            4688899999999999999999999999999999854

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=3.1e-09  Score=63.44  Aligned_cols=33  Identities=9%  Similarity=0.113  Sum_probs=30.0

Q ss_pred             CCCcccccCCCccccccCCCCcCccceeeeccc
Q psy3619           1 MCDQKTLWTPSSLVPDCVSEDTQQADYHIVASI   33 (418)
Q Consensus         1 ~C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~   33 (418)
                      .|+|+|+|++|+|+|.|++||++..|+++|.+|
T Consensus         9 ~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           9 TCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             SCSSCEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             CCCCEeECCCCCEEeECCCCCeECCCCCccccC
Confidence            389999999999999999999999999988653

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=5.4e-09  Score=62.25  Aligned_cols=36  Identities=22%  Similarity=0.633  Sum_probs=32.0

Q ss_pred             CCCCCCCccCCceEE--eeCCcccccCceeeecCCCCCCccCC-CCCCCcccccc
Q psy3619         363 RDCRTEPVLHTGLVL--TWTGYDDINGGVERVVPSHCSQHICP-PGYTGPECDQL  414 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~--~~~~~~~~~g~~~~~~~~~c~~C~C~-~Gy~G~~Ce~~  414 (418)
                      +.|.++||+|+|.|+  .|+.|                +|+|+ +||+|++||++
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y----------------~C~C~~~gy~G~~Ce~p   40 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQY----------------KCDCTRTGFYGENCTTP   40 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEE----------------EEECTTSSEETTTTCEE
T ss_pred             CcCcCCCCCCCCEEEECCCCCE----------------EEeCcCCCcCCcCcCcC
Confidence            579999999999997  47888                99996 79999999975

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=2.6e-08  Score=59.25  Aligned_cols=38  Identities=39%  Similarity=1.126  Sum_probs=31.8

Q ss_pred             CCCCCCCCCcEEEeC--CCCeEEeCCCCcCCCCcCcCCCC
Q psy3619         177 CKSNPCLNGGICRDG--VAKFTCDCPPGWTGSRCEKDIGS  214 (418)
Q Consensus       177 C~~~~C~~~~~C~~~--~~~~~C~C~~G~~G~~C~~~~~~  214 (418)
                      |.++||.++|+|++.  ..+|.|.|++||+|.+|+.++++
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~~~   40 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA   40 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCCCCcCcCcCC
Confidence            567899999999864  45799999999999999977653

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.56  E-value=4.6e-09  Score=62.91  Aligned_cols=37  Identities=35%  Similarity=0.743  Sum_probs=32.2

Q ss_pred             CCCCCCCCccCCceEE--eeCCcccccCceeeecCCCCCCccCCC-CCCCcccccc
Q psy3619         362 VRDCRTEPVLHTGLVL--TWTGYDDINGGVERVVPSHCSQHICPP-GYTGPECDQL  414 (418)
Q Consensus       362 ~~~C~~~pc~~~g~c~--~~~~~~~~~g~~~~~~~~~c~~C~C~~-Gy~G~~Ce~~  414 (418)
                      ++.|.++||+|+|.|+  .|+.|                +|+|++ ||+|++||+.
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y----------------~C~C~~~G~~G~~Ce~p   41 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRY----------------QCDCTRTGYSGPNCTIP   41 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEE----------------EEECTTSSEETTTTCEE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCE----------------EEECCCCCcCCcCcCcC
Confidence            3679999999999997  38888                999975 9999999974

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.3e-08  Score=60.11  Aligned_cols=36  Identities=33%  Similarity=0.968  Sum_probs=32.2

Q ss_pred             CCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCc
Q psy3619         175 DDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       175 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|..+||.++|+|++.+++|+|.|++||+|++|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCCC
Confidence            468889999999999999999999999999999984

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=62.29  Aligned_cols=40  Identities=38%  Similarity=1.010  Sum_probs=32.9

Q ss_pred             cCCCCCCCCCCCCcEEEeCCCCeEEeCCCCcCCCCcCcCCC
Q psy3619         173 NIDDCKSNPCLNGGICRDGVAKFTCDCPPGWTGSRCEKDIG  213 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~  213 (418)
                      ..+.|..+||.+ |+|++.+++|.|.|++||+|++|+++|.
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce~~I~   46 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQREVS   46 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSCEECC
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCcccccC
Confidence            356788888886 7898888889999999999999887663

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=6.9e-09  Score=61.91  Aligned_cols=30  Identities=13%  Similarity=0.081  Sum_probs=28.6

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeec
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVA   31 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~   31 (418)
                      |+|+|+|++|+|+|.|++||.+..|+++|.
T Consensus        11 C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2          11 CSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             SSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            899999999999999999999999998884

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.50  E-value=7.3e-09  Score=63.28  Aligned_cols=32  Identities=13%  Similarity=0.119  Sum_probs=29.3

Q ss_pred             CCCcccccCCCccccccCCCCcCccceeeecc
Q psy3619           1 MCDQKTLWTPSSLVPDCVSEDTQQADYHIVAS   32 (418)
Q Consensus         1 ~C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~   32 (418)
                      .|+|+|+|++|+|+|.|++||++..|+++|..
T Consensus        13 ~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3          13 PCDHYCHNYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             CCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCEeecCCCCEEEeCCCCCEECCCCCcccc
Confidence            38999999999999999999999999988853

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1e-08  Score=62.59  Aligned_cols=31  Identities=10%  Similarity=0.173  Sum_probs=29.1

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeecc
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVAS   32 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~   32 (418)
                      |+|+|+|++|+|+|.|++||.+..|+++|.+
T Consensus        14 C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2          14 CDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             SSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            8999999999999999999999999998864

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=1.8e-08  Score=64.08  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=27.8

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeec
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVA   31 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~   31 (418)
                      |+|+|+|++|+|+|.|++||++..++++|.
T Consensus        22 c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_          22 CQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             TSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             ccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            789999999999999999999988988874

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=2.9e-08  Score=59.75  Aligned_cols=29  Identities=28%  Similarity=0.885  Sum_probs=23.9

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCc--cCCCc
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFT--GKHCQ   93 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~--g~~C~   93 (418)
                      ++..++.|+|++|+|+|.|++||+  |+.|+
T Consensus        12 ~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g~~C~   42 (43)
T d1emoa1          12 DVCKHGQCINTDGSYRCECPFGYILAGNECV   42 (43)
T ss_dssp             TSCSSSCCCCCSSCCCCCCCTTEEESSSCEE
T ss_pred             CCCCCCEeECCCCCeEeECCCCcccCCCccc
Confidence            455678999999999999999998  44553

>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Pentraxin (pentaxin)
domain: C-reactive protein (CRP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.7e-06  Score=72.39  Aligned_cols=112  Identities=15%  Similarity=0.254  Sum_probs=80.6

Q ss_pred             ccccccCCCceEEEEEEeC--CEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCcc-CCCceEEeeeEEec
Q psy3619         272 EYATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT-EAGFEGKLTKVQIW  348 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~-~~~F~GCi~~l~in  348 (418)
                      ....+.+++||||.++++.  +.++|+|||....... ......+...+.++||........... ...|.|-|.+|+|+
T Consensus        84 ~~~~~~~~~W~Hvavt~d~~~g~~~lYinG~~~~~~~-~~~~~~~~~~~~~~iG~~~~~~g~~~~~~~~F~G~i~~~~i~  162 (206)
T d1b09a_          84 FEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKS-LKKGYTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMW  162 (206)
T ss_dssp             EECCCCCCSCEEEEEEEETTTCEEEEEETTEECCCEE-CCTTCCBCSSCEEEESSCCSBTTBCCCGGGCCCEEEEEEEEE
T ss_pred             ecCcccCCcEEEEEEEEeccCCeEEEEECCeEEeeec-ccCCceeccCCcEEeccccccccccccCCCceeeEEeeEEEE
Confidence            3456789999999999984  5799999998776543 334455666789999976665544432 35799999999999


Q ss_pred             CeecChhhhhhhcCCCCCCCCccCCceEEeeCCcc-cccCcee
Q psy3619         349 NRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGVE  390 (418)
Q Consensus       349 ~~~l~l~~~~~~~~~~C~~~pc~~~g~c~~~~~~~-~~~g~~~  390 (418)
                      ++.|...+ +......|.     ..|..+.|..+. .++|.+.
T Consensus       163 ~raLs~~E-I~~l~~~g~-----~~g~v~~w~~~~~~~~g~v~  199 (206)
T d1b09a_         163 DFVLSPDE-INTIYLGGP-----FSPNVLNWRALKYEVQGEVF  199 (206)
T ss_dssp             SSCCCHHH-HHHHHHTCC-----CCCSSBCGGGCCEEEESSCE
T ss_pred             cccCCHHH-HHHHHhCCC-----CCCCEecceeeEEEeeeeEE
Confidence            99999654 444433332     346677899887 6677753

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.37  E-value=4.4e-08  Score=61.31  Aligned_cols=36  Identities=19%  Similarity=0.101  Sum_probs=33.2

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeeccccccc
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAYRA   37 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~~~   37 (418)
                      |+|+|++++++|+|.|++||++..|+++|.+++.+.
T Consensus         8 C~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_           8 CDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             SSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             cccEeEcCCCcEEeEcCCCCEECCCCCccccCCccC
Confidence            899999999999999999999999999998877653

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=4.4e-08  Score=60.90  Aligned_cols=34  Identities=12%  Similarity=0.017  Sum_probs=31.4

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeeccccc
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAY   35 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~   35 (418)
                      |+|+|++++++|+|.|++||++..|+++|.+.++
T Consensus         9 C~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           9 CTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             CSSEEEECSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             cccEeecCCCCeEEECCCCCEECCCCCccccCCC
Confidence            8999999999999999999999999999976554

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.32  E-value=1.4e-07  Score=56.29  Aligned_cols=37  Identities=35%  Similarity=1.072  Sum_probs=31.5

Q ss_pred             CCCCCCCCCCCCcEEEe-CCCCeEEeCCC-CcCCCCcCc
Q psy3619         174 IDDCKSNPCLNGGICRD-GVAKFTCDCPP-GWTGSRCEK  210 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~~-G~~G~~C~~  210 (418)
                      ++.|..+||.++|+|++ ..++|.|.|+. ||+|.+|+.
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~   40 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI   40 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcCc
Confidence            67888899999999986 46789999986 899999973

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=5.6e-08  Score=58.62  Aligned_cols=31  Identities=16%  Similarity=0.155  Sum_probs=28.1

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeecc
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVAS   32 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~   32 (418)
                      |.+.|+|++|+|+|.|++||++..+++.|.|
T Consensus        13 c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1          13 ISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             BTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             cCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            6789999999999999999999988888754

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.2e-07  Score=57.08  Aligned_cols=32  Identities=25%  Similarity=0.778  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      |||||+..+...++.|+|++|+|.|.|++||+
T Consensus         2 DidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~   33 (43)
T d1uzka1           2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFE   33 (43)
T ss_dssp             CCCGGGSTTSSBTSEEEEETTEEEEECCTTCE
T ss_pred             CccccCCCCcCcCCEeECCCCCEEEecCCCCE
Confidence            78999866655678999999999999999996

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=7.2e-08  Score=60.18  Aligned_cols=34  Identities=21%  Similarity=0.168  Sum_probs=31.5

Q ss_pred             CCcccccCCCccccccCCCCcCccceeeeccccc
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIVASIAY   35 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c~~~~~   35 (418)
                      |+|+|+|++++|+|.|++||++.+|+++|.+.+.
T Consensus        10 C~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1          10 CDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             CSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             cccEeecCCCCeEeEcCCCCEECCCCCccccCCc
Confidence            8999999999999999999999999999976554

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=7.9e-08  Score=56.61  Aligned_cols=28  Identities=7%  Similarity=-0.134  Sum_probs=25.4

Q ss_pred             CCcccccCCCccccccCCCCcCccceeee
Q psy3619           2 CDQKTLWTPSSLVPDCVSEDTQQADYHIV   30 (418)
Q Consensus         2 C~~~C~~~~g~~~C~C~~G~~~~~~~~~c   30 (418)
                      |+|+|+|++|+|+|.|++||++. |.++|
T Consensus        12 C~h~C~n~~g~~~C~C~~Gy~L~-d~~tC   39 (40)
T d3bpse1          12 CSHVCNDLKIGYECLCPDGFQLV-AQRRC   39 (40)
T ss_dssp             CSSEEEECSSSEEEECCTTCCEE-TTTEE
T ss_pred             CcCEEEcCCCCEEEECCCCCEEC-CCCcC
Confidence            89999999999999999999985 66666

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=1.8e-07  Score=56.21  Aligned_cols=33  Identities=36%  Similarity=0.903  Sum_probs=27.3

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCeeeeCCCCccCC
Q psy3619          95 LIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFVGL  128 (418)
Q Consensus        95 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~g~  128 (418)
                      |||||+..+  |. ++.|+|+.|+|+|.|++||++.
T Consensus         2 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEEC
T ss_pred             cccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccC
Confidence            789998554  54 5789999999999999999854

>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Pentraxin (pentaxin)
domain: Serum amyloid P component (SAP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=5.1e-06  Score=69.31  Aligned_cols=114  Identities=18%  Similarity=0.268  Sum_probs=80.7

Q ss_pred             eccccccCCCceEEEEEEeC--CEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCcc-CCCceEEeeeEEe
Q psy3619         271 HEYATINDGQWHHVAIVWTQ--GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYT-EAGFEGKLTKVQI  347 (418)
Q Consensus       271 ~s~~~l~dg~WH~v~v~~~~--~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~-~~~F~GCi~~l~i  347 (418)
                      .+...+.+++||||.+++++  +.++|++|+....... ......+...+.|.||........... ...|.|=|.+|+|
T Consensus        81 ~~~~~~~~~~W~Hv~~t~d~~~g~~~~YiNG~~~~~~~-~~~~~~~~~~~~~~iG~~~~~~gg~~~~~~~f~G~i~~~~i  159 (204)
T d1saca_          81 TSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKG-LRQGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYM  159 (204)
T ss_dssp             EEECCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEE-CCTTCCBCSSCEEEESSCCSSSSCCCCGGGCCCEEEEEEEE
T ss_pred             EecccccCCceEEEEEEEecCCCcEEEEECCEEEeeec-ccceeeeecccceeccccccccCCCCCcccceeEEecceEE
Confidence            34567899999999999994  4799999998765543 333445667788999987766554443 3679999999999


Q ss_pred             cCeecChhhhhhhcCCCCCCCCccCCceEEeeCCcc-cccCceee
Q psy3619         348 WNRALDFTNEIQKQVRDCRTEPVLHTGLVLTWTGYD-DINGGVER  391 (418)
Q Consensus       348 n~~~l~l~~~~~~~~~~C~~~pc~~~g~c~~~~~~~-~~~g~~~~  391 (418)
                      ++++|...+ ++.....+.     ..|..+.|..++ ...|.+..
T Consensus       160 ~~~aLs~~E-I~~ly~~~~-----~~gnv~~w~~~~~~~~g~~~~  198 (204)
T d1saca_         160 WDSVLPPEN-ILSAYQGTP-----LPANILDWQALNYEIRGYVII  198 (204)
T ss_dssp             ESSCCCHHH-HHHHHTTCC-----CCCSSEETTSBCEEEESSCEE
T ss_pred             EcccCCHHH-HHHHHcCCC-----CCCCCccccccEEeEeceEEE
Confidence            999998544 444433221     345667898886 44665544

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1.3e-07  Score=56.57  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=26.3

Q ss_pred             CCCc-ccccCCCccccccCCCCcCccceeee
Q psy3619           1 MCDQ-KTLWTPSSLVPDCVSEDTQQADYHIV   30 (418)
Q Consensus         1 ~C~~-~C~~~~g~~~C~C~~G~~~~~~~~~c   30 (418)
                      +|.+ .|+|++|+|+|.|++||.+..+++.|
T Consensus        11 ~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2          11 LCRGGVCHNTEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             TTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred             CCCCCEeECCCCCeEEeCCCCCeECcCCCcc
Confidence            4666 89999999999999999998887766

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.4e-07  Score=55.05  Aligned_cols=24  Identities=13%  Similarity=0.237  Sum_probs=22.4

Q ss_pred             CCCcccccCCCccccccCCCCcCc
Q psy3619           1 MCDQKTLWTPSSLVPDCVSEDTQQ   24 (418)
Q Consensus         1 ~C~~~C~~~~g~~~C~C~~G~~~~   24 (418)
                      .|+|.|+|++|+|+|.|++||++.
T Consensus        10 ~C~~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3          10 FCSGVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             SCSSEEEECSSSEEEEECSSSSCE
T ss_pred             CccCEeeCCCCCeEeECCCCCeeC
Confidence            389999999999999999999984

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.2e-07  Score=60.40  Aligned_cols=47  Identities=28%  Similarity=0.754  Sum_probs=37.0

Q ss_pred             cCCCCCCCCCCCCcEEE-----eCCCCeEEeCCCCcCCCCcCcCCCCCcCCC
Q psy3619         173 NIDDCKSNPCLNGGICR-----DGVAKFTCDCPPGWTGSRCEKDIGSCTNMP  219 (418)
Q Consensus       173 ~~~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~  219 (418)
                      +.++|..++|.|+|+|.     +..++|.|.|++||+|.+|+..+..+...+
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~~~~~~~~   56 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQ   56 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTTC
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCCCccccCC
Confidence            45667788999999995     456789999999999999997776555433

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.1e-07  Score=57.18  Aligned_cols=31  Identities=42%  Similarity=1.183  Sum_probs=24.4

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCeeeeCCCCcc
Q psy3619          95 LIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        95 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      |||||+..+  |. ++.|+|++|+|+|.|++||+
T Consensus         2 DinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~   34 (43)
T d1uzka2           2 DIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYY   34 (43)
T ss_dssp             ECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCC
T ss_pred             CcccccCCCCCcC-CCEEECCCCCeEeECCCCCe
Confidence            788887444  54 46899999999999999987

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=6.7e-07  Score=52.93  Aligned_cols=36  Identities=39%  Similarity=1.026  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCCcEEEeC-CCCeEEeCC-CCcCCCCcCc
Q psy3619         175 DDCKSNPCLNGGICRDG-VAKFTCDCP-PGWTGSRCEK  210 (418)
Q Consensus       175 ~~C~~~~C~~~~~C~~~-~~~~~C~C~-~G~~G~~C~~  210 (418)
                      +.|..+||.++|+|++. .++|+|.|+ +||+|..|+.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~   39 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT   39 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcCc
Confidence            67888999999999864 678999997 5999999973

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2e-07  Score=55.94  Aligned_cols=28  Identities=18%  Similarity=0.130  Sum_probs=25.5

Q ss_pred             CcccccCCCccccccCCCCcCccceeee
Q psy3619           3 DQKTLWTPSSLVPDCVSEDTQQADYHIV   30 (418)
Q Consensus         3 ~~~C~~~~g~~~C~C~~G~~~~~~~~~c   30 (418)
                      .|.|+|++|+|+|.|++||++..+++.|
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2          15 GGKCINTFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             TSEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred             CCEEECCCCCeEeECCCCCeECcCCCcc
Confidence            4789999999999999999998888766

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.8e-07  Score=60.04  Aligned_cols=47  Identities=26%  Similarity=0.738  Sum_probs=34.9

Q ss_pred             CCCCCCCCCCCCCCeee-----cCCCCeeeeCCCCccCCccccCCCcCCCCC
Q psy3619          95 LIDDCASEPCQNGGSCV-----DMLDGFMCQCRPGFVGLQCEADIDECLSDP  141 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~g~~C~~~~~~C~~~~  141 (418)
                      ++++|..+||.++++|.     +..++|+|.|++||+|.+|+..+..+...+
T Consensus         5 ~c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~~~~~~~~   56 (63)
T d1haea_           5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQ   56 (63)
T ss_dssp             ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTTC
T ss_pred             cCCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCCCccccCC
Confidence            35677788888888884     455678899999999988887665554443

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=7.1e-07  Score=56.13  Aligned_cols=37  Identities=22%  Similarity=0.468  Sum_probs=30.6

Q ss_pred             CCCCCCCccCCceEEe---eCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         363 RDCRTEPVLHTGLVLT---WTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~~---~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      +.|..+||.|+|+|..   +..|                +|.|++||+|++||.+.
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~----------------~C~C~~gy~G~~Ce~~~   46 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSY----------------TCNCVIGYSGDRCQTRD   46 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCE----------------EEECCTTCCSSSSCCCS
T ss_pred             CCCCCCCCCCCcEeeccCCCCCe----------------EeECCCCCcCCCCccCC
Confidence            4577889999999973   3455                89999999999999864

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=8.8e-07  Score=56.02  Aligned_cols=33  Identities=36%  Similarity=0.872  Sum_probs=26.1

Q ss_pred             cCCCCCCCCC--------CCCCCeeecCCCCeeeeCCCCcc
Q psy3619          94 HLIDDCASEP--------CQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        94 ~~~~~C~~~~--------C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      .|||||+..+        +...+.|+|++|+|+|.|++||+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCe
Confidence            3788887532        33456899999999999999997

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=2.7e-07  Score=55.09  Aligned_cols=31  Identities=39%  Similarity=1.102  Sum_probs=23.1

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCeeeeCCCCcc
Q psy3619          95 LIDDCASEP--CQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        95 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      |||||+..+  |. ++.|+|++|+|+|.|++||+
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~   33 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ   33 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCe
Confidence            467776444  43 56888888888888888887

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=3.7e-07  Score=53.23  Aligned_cols=32  Identities=28%  Similarity=0.579  Sum_probs=22.5

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCeeeeCCCCccC
Q psy3619          95 LIDDCASEPCQNGGSCVDMLDGFMCQCRPGFVG  127 (418)
Q Consensus        95 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g  127 (418)
                      |||||+.. ....+.|+|++|+|+|.|++||+.
T Consensus         1 DidEC~~~-~~C~~~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           1 DIDECENG-GFCSGVCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             ECCHHHHC-SSCSSEEEECSSSEEEEECSSSSC
T ss_pred             CccccCCC-cCccCEeeCCCCCeEeECCCCCee
Confidence            46777632 333468888888888888888873

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=8.2e-07  Score=53.23  Aligned_cols=27  Identities=30%  Similarity=0.735  Sum_probs=22.7

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccCC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGKH   91 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~~   91 (418)
                      ..|. ++.|+|+.|+|+|.|++||+++.
T Consensus        11 ~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1          11 DLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             STTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             CCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            3454 68999999999999999999653

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.4e-06  Score=51.55  Aligned_cols=30  Identities=40%  Similarity=0.980  Sum_probs=21.9

Q ss_pred             CCCCCCCCCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          96 IDDCASEPCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      ||||+. +....+.|+|+.|+|+|.|++||+
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~   30 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQ   30 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEE
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCe
Confidence            567753 334456888888888888888887

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=3.9e-07  Score=56.08  Aligned_cols=37  Identities=24%  Similarity=0.448  Sum_probs=30.6

Q ss_pred             CCCCCCCccCCceEEe---eCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         363 RDCRTEPVLHTGLVLT---WTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       363 ~~C~~~pc~~~g~c~~---~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      ..|..+||.|+|.|..   ...|                .|.|++||+|++||++-
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~----------------~C~C~~gy~G~~Ce~~d   44 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKY----------------ACNCVVGYIGERCQYRD   44 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEE----------------EEEECTTEESTTSCEEC
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCe----------------EEeCCCCcccCCCCcCc
Confidence            4677889999999973   3455                89999999999999763

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1.3e-06  Score=51.09  Aligned_cols=27  Identities=33%  Similarity=0.787  Sum_probs=23.6

Q ss_pred             CCCCCCceEeeCCCCeEEecCCCCccC
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCDLGFTGK   90 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~~G~~g~   90 (418)
                      ..|+.++.|+|++|+|.|.|++||+|+
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCC
Confidence            468889999999999999999999964

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.91  E-value=2e-06  Score=52.10  Aligned_cols=31  Identities=29%  Similarity=0.898  Sum_probs=22.2

Q ss_pred             CCCCCCCC---CCCCCeeecCCCCeeeeCCCCcc
Q psy3619          96 IDDCASEP---CQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        96 ~~~C~~~~---C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      ||||+..+   +...+.|+|+.|+|+|.|++||+
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~   34 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYI   34 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCE
Confidence            57776543   34567899999999999999996

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.8e-06  Score=51.46  Aligned_cols=31  Identities=42%  Similarity=1.011  Sum_probs=24.0

Q ss_pred             CCCCCCCC---CCCCCeeecCCCCeeeeCCCCcc
Q psy3619          96 IDDCASEP---CQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        96 ~~~C~~~~---C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      ||||+..+   +...+.|+|++|+|+|.|++||.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~   34 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYV   34 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCe
Confidence            57777543   34567899999999999999997

>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Laminin G-like module
domain: Thrombospondin 1 N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2e-05  Score=65.62  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             ccccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcc-----cCCCccEEecccCCCCCCCccCCCceEEeeeEE
Q psy3619         272 EYATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKS-----LPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQ  346 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~-----l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~  346 (418)
                      ....+.||+||||.+.+.+..++|+||+....+.........     +.....+++|...       ....|.|.|++|+
T Consensus       117 ~~~~l~d~~Whhva~~~~~~~v~lyvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-------~~~~F~G~i~dvr  189 (206)
T d2erfa1         117 EEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGG-------VNDNFQGVLQNVR  189 (206)
T ss_dssp             SSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCT-------TTCBCCEEEEEEE
T ss_pred             ccccccCCCEEEEEEEEeCCEEEEEECCEEEEeEEccCCcccccCCccceeEEEEEccCC-------CCCCCEEEeEEEE
Confidence            345789999999999999999999999976544321111111     1123356666421       1246999999998


Q ss_pred             -ecCeecC
Q psy3619         347 -IWNRALD  353 (418)
Q Consensus       347 -in~~~l~  353 (418)
                       |-++.|+
T Consensus       190 li~g~~l~  197 (206)
T d2erfa1         190 FVFGTTPE  197 (206)
T ss_dssp             EECSCCHH
T ss_pred             EECCCcHH
Confidence             6676554

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=4.2e-06  Score=46.12  Aligned_cols=37  Identities=19%  Similarity=0.410  Sum_probs=30.0

Q ss_pred             CccCCceEEeeCCcccccCceeeecCCCCCCccCCCCCCCccccccccC
Q psy3619         369 PVLHTGLVLTWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLTVD  417 (418)
Q Consensus       369 pc~~~g~c~~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~~~  417 (418)
                      -|+|||.|+++--|..+            .+|.||.+|.|..||..+..
T Consensus         3 ~ClNGG~Cvsyk~FS~I------------~rC~CPk~f~G~HCEiDt~k   39 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNI------------HWCNCPKKFGGQHCEIDKSK   39 (40)
T ss_dssp             CCCTTCEEEECSSSTTC------------EEEECCTTEESTTSCEESSC
T ss_pred             ccccCCEEEEEehhcCC------------EEecCCcccCceeEEecccC
Confidence            48899999987777333            38999999999999987654

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=1.3e-05  Score=50.12  Aligned_cols=36  Identities=36%  Similarity=1.031  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCc
Q psy3619         175 DDCKSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       175 ~~C~~~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      +.|..++|.++|+|.  .....|.|.|++||+|.+|+.
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            456678999999997  445689999999999999984

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.8e-06  Score=54.94  Aligned_cols=34  Identities=12%  Similarity=0.143  Sum_probs=30.6

Q ss_pred             CCcccccCCC-ccccccCCCCcCccceeeeccccc
Q psy3619           2 CDQKTLWTPS-SLVPDCVSEDTQQADYHIVASIAY   35 (418)
Q Consensus         2 C~~~C~~~~g-~~~C~C~~G~~~~~~~~~c~~~~~   35 (418)
                      |+|+|+++++ +|+|.|++||.+.+|+++|.++++
T Consensus        10 C~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~   44 (57)
T d1rfnb_          10 CEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP   44 (57)
T ss_dssp             CSSEEEECTTSCEEEECCTTEEECTTSSSEEECSS
T ss_pred             cccEeeeCCCCCeEeECCCCCEECCCCCccccCCC
Confidence            8999999975 899999999999999999987654

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=5.1e-06  Score=48.48  Aligned_cols=30  Identities=33%  Similarity=0.883  Sum_probs=25.3

Q ss_pred             CCCCCCCeeecCCCCeeeeCCCCccC--Cccc
Q psy3619         102 EPCQNGGSCVDMLDGFMCQCRPGFVG--LQCE  131 (418)
Q Consensus       102 ~~C~~~~~C~~~~g~~~C~C~~G~~g--~~C~  131 (418)
                      ..|..++.|+|++|+|.|.|++||+|  ..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNGRQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCCCEee
Confidence            35788899999999999999999994  4453

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7.5e-06  Score=50.13  Aligned_cols=37  Identities=30%  Similarity=0.823  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCcEEEe--CCCCeEEeCCCCcCCCCcCc
Q psy3619         174 IDDCKSNPCLNGGICRD--GVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       174 ~~~C~~~~C~~~~~C~~--~~~~~~C~C~~G~~G~~C~~  210 (418)
                      .+.|..++|.|+|+|+.  ...+|.|.|+.||+|.+|+.
T Consensus         4 C~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           4 CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CCSTTCCEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            45667788999999964  45679999999999999973

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=7.1e-06  Score=47.99  Aligned_cols=31  Identities=26%  Similarity=0.654  Sum_probs=22.5

Q ss_pred             CCCCCCCCCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          96 IDDCASEPCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      +|||+.++......|+|++++|+|.|++||.
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~   32 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQ   32 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCC
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCE
Confidence            4677666555556888888888888888886

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=4.7e-06  Score=51.41  Aligned_cols=30  Identities=13%  Similarity=0.125  Sum_probs=26.4

Q ss_pred             CCcccc------cCCCccccccCCCCcCccceeeec
Q psy3619           2 CDQKTL------WTPSSLVPDCVSEDTQQADYHIVA   31 (418)
Q Consensus         2 C~~~C~------~~~g~~~C~C~~G~~~~~~~~~c~   31 (418)
                      |+|+|+      +..++|+|.|++||++..|+++|.
T Consensus        14 C~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2          14 CQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             CSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             CcCccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            899997      445799999999999999998884

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=4.2e-06  Score=52.32  Aligned_cols=32  Identities=16%  Similarity=0.052  Sum_probs=28.9

Q ss_pred             CCcccccCCC-ccccccCCCCcCccceeeeccc
Q psy3619           2 CDQKTLWTPS-SLVPDCVSEDTQQADYHIVASI   33 (418)
Q Consensus         2 C~~~C~~~~g-~~~C~C~~G~~~~~~~~~c~~~   33 (418)
                      |+|+|+++++ +|+|.|+.||.+.+|+++|.+.
T Consensus         9 C~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~   41 (53)
T d2bz6l1           9 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT   41 (53)
T ss_dssp             CSSEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred             CcCEeeeCCCCCEEeECCCCCEECCCCCcccCC
Confidence            8999999986 6899999999999999999654

>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Leech intramolecular trans-sialidase, N-terminal domain
domain: Leech intramolecular trans-sialidase, N-terminal domain
species: North american leech (Macrobdella decora) [TaxId: 6405]

Probab=97.58  E-value=0.00023  Score=58.27  Aligned_cols=81  Identities=14%  Similarity=0.188  Sum_probs=54.2

Q ss_pred             ccccCCCceEEEEEEe--CCEEEEEEcCeeeccceecCCCc--ccCCCccEEecccCCCCCCCccCCCceEEeeeEEecC
Q psy3619         274 ATINDGQWHHVAIVWT--QGTLTLITEGLIAGKVENYGSGK--SLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWN  349 (418)
Q Consensus       274 ~~l~dg~WH~v~v~~~--~~~~~l~vD~~~~~~~~~~~~~~--~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~  349 (418)
                      ..+++++||+|.+.++  .+.++|+||+.............  .......++||.......   ....|.|-|.+|+|++
T Consensus       103 ~~~~~~~W~hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~---~~~~f~G~Id~v~iyn  179 (196)
T d2slia1         103 LYKGERVFNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQGK---IAYPFGGTIGDIKVYS  179 (196)
T ss_dssp             EETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE---EESCCCEEEEEEEEES
T ss_pred             ceecCCcEEEEEEEEECCCCEEEEEECCeEEEEEecCCCccceeeeecceeeeeccccCCC---CCccceEEeEEEEEEC
Confidence            3468999999999998  45799999997765443222211  122234677765332221   1245999999999999


Q ss_pred             eecChhhh
Q psy3619         350 RALDFTNE  357 (418)
Q Consensus       350 ~~l~l~~~  357 (418)
                      ++|.-.+.
T Consensus       180 ~aLs~~EI  187 (196)
T d2slia1         180 NALSDEEL  187 (196)
T ss_dssp             SCCCHHHH
T ss_pred             CcCCHHHH
Confidence            99986444

>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype B [TaxId: 1491]

Probab=97.55  E-value=0.00013  Score=60.70  Aligned_cols=78  Identities=12%  Similarity=0.095  Sum_probs=57.5

Q ss_pred             cccccCCCceEEEEEEeCCEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeec
Q psy3619         273 YATINDGQWHHVAIVWTQGTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRAL  352 (418)
Q Consensus       273 ~~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l  352 (418)
                      ...+.+++||||.+++++..++|+||+....... ......+.....+.||.....      ...|.|-|.+|+|.+|+|
T Consensus       132 ~~~~~~~~W~hi~~t~d~~~~~iYvNG~l~~~~~-~~~~~~~~~~~~~~~g~~~~~------~~~~~g~id~v~iynraL  204 (218)
T d1epwa1         132 DISEYINRWFFVTITNNLNNAKIYINGKLESNTD-IKDIREVIANGEIIFKLDGDI------DRTQFIWMKYFSIFNTEL  204 (218)
T ss_dssp             SSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEE-CSSCCCCCCCSEEEEEEEESC------CTTCCEEEEEEEEESSCC
T ss_pred             cccccCCcEEEEEEEECCCEEEEEECCEEEeeee-ccCcccccCCCcEEEEEecCC------CCCCceEeEEEEEECCCC
Confidence            4567889999999999999999999998766543 223333445667777753322      135889999999999999


Q ss_pred             Chhhh
Q psy3619         353 DFTNE  357 (418)
Q Consensus       353 ~l~~~  357 (418)
                      .-.+.
T Consensus       205 s~~EI  209 (218)
T d1epwa1         205 SQSNI  209 (218)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            86543

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.9e-05  Score=45.77  Aligned_cols=30  Identities=20%  Similarity=0.808  Sum_probs=19.0

Q ss_pred             CCCCC-CCCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          97 DDCAS-EPCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        97 ~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      |||+. ......+.|+|++|+|+|.|++||+
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~   31 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYF   31 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCE
Confidence            45542 2223345788877888888888876

>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Tetanus neurotoxin
species: Clostridium tetani [TaxId: 1513]

Probab=97.38  E-value=0.00033  Score=59.56  Aligned_cols=79  Identities=15%  Similarity=0.241  Sum_probs=56.8

Q ss_pred             ccccccCCCceEEEEEEeC-CEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCe
Q psy3619         272 EYATINDGQWHHVAIVWTQ-GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNR  350 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~-~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~  350 (418)
                      ....+.+++||||.+++++ +.++|++|+....... ......+.....+.||....      ....|.|=|.+|+|..|
T Consensus       159 ~~~~~~~~~W~hia~t~d~~~~~~lYinG~~~~~~~-~~~~~~~~~~~~~~ig~~~~------~~~~~~G~Idd~~iynr  231 (247)
T d1a8da1         159 KFNAYLANKWVFITITNDRLSSANLYINGVLMGSAE-ITGLGAIREDNNITLKLDRC------NNNNQYVSIDKFRIFCK  231 (247)
T ss_dssp             TTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEE-CTTCCCCCCCSEEEEEEESC------CCTTCEEEEEEEEEESS
T ss_pred             ccccccCCcEEEEEEEEeCCCcEEEEECCEEEEeEE-eccccccCCCCeEEEEEcCC------CCCCceEEeeEEEEECC
Confidence            3456889999999999985 5899999998766543 22223344456677775322      12569999999999999


Q ss_pred             ecChhhh
Q psy3619         351 ALDFTNE  357 (418)
Q Consensus       351 ~l~l~~~  357 (418)
                      .|...+.
T Consensus       232 aLs~~EI  238 (247)
T d1a8da1         232 ALNPKEI  238 (247)
T ss_dssp             CCCHHHH
T ss_pred             CCCHHHH
Confidence            9986544

>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Clostridium neurotoxins, the second last domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]

Probab=97.29  E-value=0.00046  Score=56.89  Aligned_cols=74  Identities=7%  Similarity=0.048  Sum_probs=54.6

Q ss_pred             ccccccCCCceEEEEEEeC-CEEEEEEcCeeeccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCe
Q psy3619         272 EYATINDGQWHHVAIVWTQ-GTLTLITEGLIAGKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNR  350 (418)
Q Consensus       272 s~~~l~dg~WH~v~v~~~~-~~~~l~vD~~~~~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~  350 (418)
                      ....+.+++||||.+++++ +.++|+||+....+.. ......+.....+.+|......      ..|.|=|.+|+|.+|
T Consensus       133 ~~~~~~~~~W~Hva~t~d~~~~~~lYiNG~lv~s~~-~s~~~~~~~~~~~~~g~~~~~~------~~~~~~id~~riyn~  205 (207)
T d3btaa1         133 INISDYINRWIFVTITNNRLNNSKIYINGRLIDQKP-ISNLGNIHASNNIMFKLDGCRD------THRYIWIKYFNLFDK  205 (207)
T ss_dssp             CSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEE-CTTCCCCCCCSEEEEEEESCCC------TTCEEEEEEEEEESS
T ss_pred             eeeeecCCcEEEEEEEEcCCCcEEEEECCEEEEeEE-ecCccccccCCcEEEEECCCCC------CcceEEEeEEEEECc
Confidence            3557889999999999985 5789999998877554 3333445666778887544332      457788999999888


Q ss_pred             ec
Q psy3619         351 AL  352 (418)
Q Consensus       351 ~l  352 (418)
                      .|
T Consensus       206 aL  207 (207)
T d3btaa1         206 EL  207 (207)
T ss_dssp             CC
T ss_pred             cC
Confidence            75

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=3.6e-05  Score=47.22  Aligned_cols=32  Identities=16%  Similarity=0.420  Sum_probs=25.3

Q ss_pred             CCCccCCceEE--eeCCcccccCceeeecCCCCCCccCCCCCCCcccccc
Q psy3619         367 TEPVLHTGLVL--TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQL  414 (418)
Q Consensus       367 ~~pc~~~g~c~--~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~  414 (418)
                      .+.|.|||.|.  ..+.+                .|.|+.||+|.+||+.
T Consensus        13 ~~yC~nGgcc~~~~~~~~----------------~C~C~~gy~G~rCe~~   46 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTP----------------SCVCDEGYIGARCERV   46 (50)
T ss_dssp             TTSCTTCCEEEETTTTEE----------------EECCCTTEETTTTCEE
T ss_pred             CCCccCCeEEEeCCCCCc----------------EeECCCCCeeCCCccc
Confidence            45788988875  34444                8999999999999975

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=9.4e-05  Score=44.36  Aligned_cols=17  Identities=35%  Similarity=0.806  Sum_probs=15.2

Q ss_pred             CccCCCCCCCccccccc
Q psy3619         399 QHICPPGYTGPECDQLT  415 (418)
Q Consensus       399 ~C~C~~Gy~G~~Ce~~~  415 (418)
                      .|.|++||+|.+||.-+
T Consensus        29 ~C~C~~gY~G~RCe~~~   45 (46)
T d1k36a_          29 YCRCEVGYTGVRCEHFF   45 (46)
T ss_dssp             EEEECTTCSSTTSCCCC
T ss_pred             EeECCCCceecCceeee
Confidence            79999999999999753

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00022  Score=38.85  Aligned_cols=29  Identities=45%  Similarity=1.308  Sum_probs=21.4

Q ss_pred             CCCC-CCCCCCCCeeecCCCCeeeeCCCCcc
Q psy3619          97 DDCA-SEPCQNGGSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus        97 ~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~  126 (418)
                      |+|+ .+||++ ++|.|..|+|.|.|..||.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSC
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcC
Confidence            4554 356665 7888888888888888886

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00014  Score=44.18  Aligned_cols=32  Identities=19%  Similarity=0.439  Sum_probs=24.5

Q ss_pred             CCccCCceEE--eeCCcccccCceeeecCCCCCCccCCCCCCCccccccc
Q psy3619         368 EPVLHTGLVL--TWTGYDDINGGVERVVPSHCSQHICPPGYTGPECDQLT  415 (418)
Q Consensus       368 ~pc~~~g~c~--~~~~~~~~~g~~~~~~~~~c~~C~C~~Gy~G~~Ce~~~  415 (418)
                      +.|.|||.|.  .....                .|.|++||+|.+||...
T Consensus        13 ~yClnGgcc~~~~~~~~----------------~C~C~~gy~G~RCe~~~   46 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKP----------------ACVCHSGYVGARCEHAD   46 (49)
T ss_dssp             CSSTTEEEEEETTTTEE----------------EEEECTTEESTTSCEEC
T ss_pred             CEeeCCeEEecCCCCCc----------------EeECCCCCEecCCcccc
Confidence            5688888774  33333                79999999999999754

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00098  Score=39.77  Aligned_cols=32  Identities=38%  Similarity=0.867  Sum_probs=25.1

Q ss_pred             CCCCCCCCcEEE--eCCCCeEEeCCCCcCCCCcCc
Q psy3619         178 KSNPCLNGGICR--DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       178 ~~~~C~~~~~C~--~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      ..+.|.+ |.|.  .....+.|.|+.||+|.+|+.
T Consensus        10 ~~~yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          10 MNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             CCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred             CCCcCcC-CEEEEeCCCCccEeECCCCceecCcee
Confidence            3467888 6674  455678999999999999983

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0012  Score=40.26  Aligned_cols=32  Identities=28%  Similarity=0.676  Sum_probs=26.5

Q ss_pred             CCCCCCCcEEE-eCCCCeEEeCCCCcCCCCcCc
Q psy3619         179 SNPCLNGGICR-DGVAKFTCDCPPGWTGSRCEK  210 (418)
Q Consensus       179 ~~~C~~~~~C~-~~~~~~~C~C~~G~~G~~C~~  210 (418)
                      .+.|.+++.|. .....+.|.|+.||+|.+|+.
T Consensus        13 ~~yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          13 KHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             TTSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             CCCccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            46799999884 556678999999999999983

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0023  Score=35.02  Aligned_cols=31  Identities=29%  Similarity=0.529  Sum_probs=22.8

Q ss_pred             CCCCCceEeeC---CCCeEEecCCCCccCCCccC
Q psy3619          65 NDSIPGTCTDL---VGGFSCSCDLGFTGKHCQHL   95 (418)
Q Consensus        65 ~c~~~~~C~~~---~g~~~C~C~~G~~g~~C~~~   95 (418)
                      .|.++|+|+..   ....+|.||.+|.|..|+.|
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiD   36 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   36 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred             ccccCCEEEEEehhcCCEEecCCcccCceeEEec
Confidence            47778888843   45678888888888888743

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.22  E-value=0.00075  Score=41.49  Aligned_cols=19  Identities=26%  Similarity=0.683  Sum_probs=11.0

Q ss_pred             CeeecCCCCeeeeCCCCcc
Q psy3619         108 GSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus       108 ~~C~~~~g~~~C~C~~G~~  126 (418)
                      ..|+++.++|+|.|++||+
T Consensus        10 h~C~~~~~~~~C~C~~Gy~   28 (51)
T d1kigl_          10 QFCREERSEVRCSCAHGYV   28 (51)
T ss_dssp             SCCCEETTEECCCCCTTEE
T ss_pred             cEeEcCCCcEEeEcCCCCE
Confidence            4555555556666666664

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0013  Score=40.17  Aligned_cols=19  Identities=26%  Similarity=0.770  Sum_probs=11.5

Q ss_pred             CeeecCCCCeeeeCCCCcc
Q psy3619         108 GSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus       108 ~~C~~~~g~~~C~C~~G~~  126 (418)
                      ..|++++++|+|.|++||+
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~   29 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYK   29 (50)
T ss_dssp             SEEEECSSSEEEECCTTEE
T ss_pred             cEeecCCCCeEEECCCCCE
Confidence            4566666666666666665

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0021  Score=38.85  Aligned_cols=31  Identities=32%  Similarity=0.695  Sum_probs=25.4

Q ss_pred             CCCCCCCcEE-EeCCCCeEEeCCCCcCCCCcC
Q psy3619         179 SNPCLNGGIC-RDGVAKFTCDCPPGWTGSRCE  209 (418)
Q Consensus       179 ~~~C~~~~~C-~~~~~~~~C~C~~G~~G~~C~  209 (418)
                      .+.|.|++.| +.....+.|.|+.||+|.+|+
T Consensus        12 ~~yClnGgcc~~~~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          12 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             SCSSTTEEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCEeeCCeEEecCCCCCcEeECCCCCEecCCc
Confidence            3568888877 455567899999999999998

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0051  Score=33.33  Aligned_cols=23  Identities=43%  Similarity=1.180  Sum_probs=20.5

Q ss_pred             CCCCCceEeeCCCCeEEecCCCCc
Q psy3619          65 NDSIPGTCTDLVGGFSCSCDLGFT   88 (418)
Q Consensus        65 ~c~~~~~C~~~~g~~~C~C~~G~~   88 (418)
                      +|+ +|+|.|..|+|.|.|..||.
T Consensus         9 pCG-nGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           9 PCG-NGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             SSS-SSCEEECSSSEEECCSSSSC
T ss_pred             ccC-CceeeecccceEEeecCCcC
Confidence            444 69999999999999999998

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0016  Score=39.86  Aligned_cols=19  Identities=21%  Similarity=0.746  Sum_probs=9.5

Q ss_pred             CeeecCCCCeeeeCCCCcc
Q psy3619         108 GSCVDMLDGFMCQCRPGFV  126 (418)
Q Consensus       108 ~~C~~~~g~~~C~C~~G~~  126 (418)
                      ..|++++++|+|.|++||+
T Consensus        12 h~C~n~~g~~~C~C~~Gy~   30 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYT   30 (51)
T ss_dssp             SEEEEETTEEEEECCTTEE
T ss_pred             cEeecCCCCeEeEcCCCCE
Confidence            3455555555555555554

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0014  Score=37.85  Aligned_cols=16  Identities=50%  Similarity=1.173  Sum_probs=14.4

Q ss_pred             CccCCCCCCCcccccc
Q psy3619         399 QHICPPGYTGPECDQL  414 (418)
Q Consensus       399 ~C~C~~Gy~G~~Ce~~  414 (418)
                      .|.|+.||+|.+|+.-
T Consensus        25 ~C~C~~gY~G~RCq~~   40 (41)
T d1xdtr_          25 SCICHPGYHGERCHGL   40 (41)
T ss_dssp             CEEECTTEESTTCCEE
T ss_pred             eeECCCCCeecCcccC
Confidence            7999999999999853

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0092  Score=36.16  Aligned_cols=31  Identities=16%  Similarity=0.342  Sum_probs=20.0

Q ss_pred             CCCCCCCCCCCCCeee------cCCCCeeeeCCCCcc
Q psy3619          96 IDDCASEPCQNGGSCV------DMLDGFMCQCRPGFV  126 (418)
Q Consensus        96 ~~~C~~~~C~~~~~C~------~~~g~~~C~C~~G~~  126 (418)
                      .++|+.+.-+....|+      ++.++|+|.|+.||+
T Consensus         4 cneC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~   40 (50)
T d1ijqa2           4 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGML   40 (50)
T ss_dssp             TSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCE
T ss_pred             ccccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCE
Confidence            3455555544556775      344678888888887

>d2ah2a1 b.29.1.15 (A:409-633) Trypanosoma sialidase, C-terminal domain {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Trypanosoma sialidase, C-terminal domain
domain: Trypanosoma sialidase, C-terminal domain
species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]

Probab=94.55  E-value=0.13  Score=41.31  Aligned_cols=78  Identities=13%  Similarity=0.164  Sum_probs=53.7

Q ss_pred             ccCCCceEEEEEEeCCEEEEEEcCeeec-cceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecCh
Q psy3619         276 INDGQWHHVAIVWTQGTLTLITEGLIAG-KVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDF  354 (418)
Q Consensus       276 l~dg~WH~v~v~~~~~~~~l~vD~~~~~-~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l  354 (418)
                      ..-++.|+|.|..+++.++++||+.... ................+|||+.......    .+-.--+++|.+-+|+|+.
T Consensus       131 we~~k~yqVal~l~~~~gsvYVDG~~v~~~~~~~~~~~~~~~IShFyiGg~g~~~~~----~~~~VTVtNVlLYNRpL~~  206 (225)
T d2ah2a1         131 WEMGKRYHVVLTMANKIGSVYIDGEPLEGSGQTVVPDERTPDISHFYVGGYKRSGMP----TDSRVTVNNVLLYNRQLNA  206 (225)
T ss_dssp             CCTTCEEEEEEEEETTEEEEEETTEECTTCCEECCCSSSCCCCCEEEESSCCCTTSC----CCCCEEEEEEEEESSCCCH
T ss_pred             ccCCcEEEEEEEEeCCcEEEEECCEEecCCcccccCCCCCCccceEEEeCCCCCCCc----cCCcEEEEEeEEECCCCCH
Confidence            4566779999999999999999997652 2233334444445678999876543211    2223568999999999987


Q ss_pred             hhh
Q psy3619         355 TNE  357 (418)
Q Consensus       355 ~~~  357 (418)
                      .+.
T Consensus       207 ~Ei  209 (225)
T d2ah2a1         207 EEI  209 (225)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.013  Score=33.62  Aligned_cols=29  Identities=28%  Similarity=0.610  Sum_probs=21.9

Q ss_pred             CCCCCCceEee--CCCCeEEecCCCCccCCCc
Q psy3619          64 PNDSIPGTCTD--LVGGFSCSCDLGFTGKHCQ   93 (418)
Q Consensus        64 ~~c~~~~~C~~--~~g~~~C~C~~G~~g~~C~   93 (418)
                      +-|-+ |+|..  ....+.|.|..||+|.+|+
T Consensus         8 ~yCih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           8 DFCIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             TCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CEeEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            34665 88974  3456789999999999886

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.0074  Score=31.39  Aligned_cols=17  Identities=29%  Similarity=0.911  Sum_probs=14.9

Q ss_pred             CCCCccCCCCCCCcccc
Q psy3619         396 HCSQHICPPGYTGPECD  412 (418)
Q Consensus       396 ~c~~C~C~~Gy~G~~Ce  412 (418)
                      .|..|.|.+||+|.+|.
T Consensus        12 ~CG~C~C~~gw~G~~CN   28 (31)
T d1jv2b4          12 SCGDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSTTTCCCTTEESSSSC
T ss_pred             cCCceEccCCccccccc
Confidence            45689999999999996

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.42  E-value=0.025  Score=35.04  Aligned_cols=44  Identities=27%  Similarity=0.583  Sum_probs=24.5

Q ss_pred             CCCCcEEEe--CCCCeEE-eCCCCcCCCCcCcCCCCCcCCCCCCCCe
Q psy3619         182 CLNGGICRD--GVAKFTC-DCPPGWTGSRCEKDIGSCTNMPCQNDAN  225 (418)
Q Consensus       182 C~~~~~C~~--~~~~~~C-~C~~G~~G~~C~~~~~~C~~~~c~~~~~  225 (418)
                      |.+++.|..  ..+...| .|+.||+|.+|+...+....+|...++.
T Consensus         3 C~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~P~~~~g~   49 (55)
T d1kloa1           3 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGP   49 (55)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSS
T ss_pred             CcCCCccceeCCCCCEEcCCCCCCCccCcccccCCccccCcccCCCc
Confidence            444555542  2344566 4788888888776555554444444333

>d1n1ta1 b.29.1.15 (A:413-634) Trypanosoma sialidase, C-terminal domain {Trypanosoma rangeli [TaxId: 5698]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Trypanosoma sialidase, C-terminal domain
domain: Trypanosoma sialidase, C-terminal domain
species: Trypanosoma rangeli [TaxId: 5698]

Probab=93.41  E-value=0.5  Score=37.62  Aligned_cols=76  Identities=20%  Similarity=0.278  Sum_probs=51.6

Q ss_pred             CCCceEEEEEEeCCEEEEEEcCeee-ccceecCCCcccCCCccEEecccCCCCCCCccCCCceEEeeeEEecCeecChhh
Q psy3619         278 DGQWHHVAIVWTQGTLTLITEGLIA-GKVENYGSGKSLPQYGWVVLGKPRPDNIKAYTEAGFEGKLTKVQIWNRALDFTN  356 (418)
Q Consensus       278 dg~WH~v~v~~~~~~~~l~vD~~~~-~~~~~~~~~~~l~~~~~l~iG~~~~~~~~~~~~~~F~GCi~~l~in~~~l~l~~  356 (418)
                      -++-|+|.|..+++.++++||+... .................+|||+.......    .+-.=-+++|.+-+|+|+..+
T Consensus       133 ~~k~yqVal~l~~~~gsvYVDG~~v~~~~~~~~~~~~~~~IshFyiGg~g~~~~~----~~~~VTVtNVlLYNRpL~~~E  208 (222)
T d1n1ta1         133 LHKKYHVVLTMADRQGSVYVDGQPLAGSGNTVVRGATLPDISHFYIGGPRSKGAP----TDSRVTVTNVVLYNRRLNSSE  208 (222)
T ss_dssp             TTCEEEEEEEEETTEEEEEETTEECTTTTEECCCSSSCCCEEEEEEECCCSSSSC----CCCCEEEEEEEEESSCCCHHH
T ss_pred             CCcEEEEEEEEeCCEEEEEECCEEEecccccccCCCCCCccCeEEECCCCCCCCC----CCCcEEEEEeEEeCCCCCHHH
Confidence            4455999999999999999999866 33333444444445678999876433211    122346899999999998755


Q ss_pred             h
Q psy3619         357 E  357 (418)
Q Consensus       357 ~  357 (418)
                      .
T Consensus       209 i  209 (222)
T d1n1ta1         209 I  209 (222)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.023  Score=35.38  Aligned_cols=21  Identities=24%  Similarity=0.643  Sum_probs=12.5

Q ss_pred             CCCeeecCCC-CeeeeCCCCcc
Q psy3619         106 NGGSCVDMLD-GFMCQCRPGFV  126 (418)
Q Consensus       106 ~~~~C~~~~g-~~~C~C~~G~~  126 (418)
                      ....|+++++ +|+|.|++||.
T Consensus        10 C~h~C~~~~~~~~~C~C~~Gy~   31 (57)
T d1rfnb_          10 CEQFCKNSADNKVVCSCTEGYR   31 (57)
T ss_dssp             CSSEEEECTTSCEEEECCTTEE
T ss_pred             cccEeeeCCCCCeEeECCCCCE
Confidence            3456666543 56666666665

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.89  E-value=0.029  Score=34.69  Aligned_cols=18  Identities=33%  Similarity=0.840  Sum_probs=9.0

Q ss_pred             CCeee-ecCCCCcCcccee
Q psy3619         155 NKFQC-ECNVGYTGVMCET  172 (418)
Q Consensus       155 ~~~~C-~C~~G~~g~~C~~  172 (418)
                      +...| .|++||+|.+|+.
T Consensus        16 ~~~vC~~C~~~~~G~~Ce~   34 (55)
T d1kloa1          16 KEVVCTHCPTGTAGKRCEL   34 (55)
T ss_dssp             CCEEECSCCTTEESTTSCE
T ss_pred             CCEEcCCCCCCCccCcccc
Confidence            34444 3555555555543

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.69  E-value=0.016  Score=33.28  Aligned_cols=14  Identities=36%  Similarity=1.113  Sum_probs=13.4

Q ss_pred             CccCCCCCCCcccc
Q psy3619         399 QHICPPGYTGPECD  412 (418)
Q Consensus       399 ~C~C~~Gy~G~~Ce  412 (418)
                      +|.|.+||+|+.||
T Consensus        27 ~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          27 KCRCHPGFEGSACQ   40 (41)
T ss_dssp             EEEECTTCCTTTTC
T ss_pred             EEEcCCCCcccCcc
Confidence            89999999999998

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.019  Score=33.15  Aligned_cols=16  Identities=31%  Similarity=0.949  Sum_probs=14.1

Q ss_pred             CCccC-CCCCCCccccc
Q psy3619         398 SQHIC-PPGYTGPECDQ  413 (418)
Q Consensus       398 ~~C~C-~~Gy~G~~Ce~  413 (418)
                      .+|+| .+||+|++||+
T Consensus        22 G~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          22 GSCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             TEEEECCSSCBSTTSCB
T ss_pred             CEeEeCCCCccCCcccc
Confidence            48999 58999999997

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=0.063  Score=30.64  Aligned_cols=22  Identities=41%  Similarity=0.839  Sum_probs=18.8

Q ss_pred             CCceEeeCCCCeEEecCCCCccCCCc
Q psy3619          68 IPGTCTDLVGGFSCSCDLGFTGKHCQ   93 (418)
Q Consensus        68 ~~~~C~~~~g~~~C~C~~G~~g~~C~   93 (418)
                      .+|+|+.    .+|.|.+||+|..|+
T Consensus        19 ~hG~C~~----G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          19 GRGLCFC----GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HHEEEET----TEEEECTTCCTTTTC
T ss_pred             CCCeEEC----CEEEcCCCCcccCcc
Confidence            4799985    369999999999996

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.25  E-value=0.076  Score=32.34  Aligned_cols=21  Identities=24%  Similarity=0.585  Sum_probs=13.9

Q ss_pred             CCCeeecCCC-CeeeeCCCCcc
Q psy3619         106 NGGSCVDMLD-GFMCQCRPGFV  126 (418)
Q Consensus       106 ~~~~C~~~~g-~~~C~C~~G~~  126 (418)
                      ....|+++++ +|+|.|+.||+
T Consensus         9 C~h~C~~~~~~~~~C~C~~Gy~   30 (53)
T d2bz6l1           9 CEQYCSDHTGTKRSCRCHEGYS   30 (53)
T ss_dssp             CSSEEEEETTTEEEEECCTTEE
T ss_pred             CcCEeeeCCCCCEEeECCCCCE
Confidence            3456777655 46777777776

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.17  Score=28.97  Aligned_cols=26  Identities=35%  Similarity=0.488  Sum_probs=21.6

Q ss_pred             CCCCCCceEeeCCCCeEEecC-CCCccCCCc
Q psy3619          64 PNDSIPGTCTDLVGGFSCSCD-LGFTGKHCQ   93 (418)
Q Consensus        64 ~~c~~~~~C~~~~g~~~C~C~-~G~~g~~C~   93 (418)
                      ..|+.+|+|+-    -.|.|. +||.|..|+
T Consensus        11 ~iCng~G~C~c----G~C~C~~~gy~G~~Ce   37 (43)
T d1jv2b5          11 LLCSGRGKCEC----GSCVCIQPGSYGDTCE   37 (43)
T ss_dssp             SGGGGTEEEET----TEEEECCSSCBSTTSC
T ss_pred             CEECCCCEEEC----CEeEeCCCCccCCccc
Confidence            35899999984    369995 899999997

>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Hypothetical protein YesU
domain: Hypothetical protein YesU
species: Bacillus subtilis [TaxId: 1423]

Probab=84.77  E-value=1.4  Score=35.18  Aligned_cols=33  Identities=9%  Similarity=0.045  Sum_probs=28.4

Q ss_pred             ccccCCCceEEEEEEeCCEEEEEEcCeeeccce
Q psy3619         274 ATINDGQWHHVAIVWTQGTLTLITEGLIAGKVE  306 (418)
Q Consensus       274 ~~l~dg~WH~v~v~~~~~~~~l~vD~~~~~~~~  306 (418)
                      ..+..|+||+++|...+.++++.||+.......
T Consensus       153 ~~~~~geWn~~~I~v~G~~i~~~lNG~~v~d~~  185 (223)
T d1oq1a_         153 SPDDADSPYRMKLIKDKGYVHFSINGLPILEWM  185 (223)
T ss_dssp             CGGGCCSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred             ccccCCCcEEEEEEEECCEEEEEECCEEEEEEE
Confidence            456789999999999999999999998776543