Psyllid ID: psy4991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
Protein Sequence
MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEEcccEEEEEEEEcccccHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHcccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccEEEEEEEcccccHHHHHHHcccccHHHHHHcEcccccHHHHHHHHHHHHHHHHHHHccccEEEEccccccEEEEEc
Coil and Loop (DISEMBL)
MCAKLLTTnlnlpfprhalreynihkaldhprvvkLYDVFEIDANSFCTvleycdghdldFYLKQHKTIAEREARclsqpylstsARSIVMQVVSALKYlneikppvihydlkpgkplflfa
Flexible Loop (DISEMBL)
MCAKLLTTnlnlpfprHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEikppvihydlkpgKPLFLFA
Low Complexity Region (SEG)
MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Disordered region (IsUnstruct)
****LLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL**
Disordered Region (DISOPRED)
**AK*************ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Disordered Region (DISEMBL)
MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Disordered Region (DISPRO)
MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	122	2.2.26 [Sep-21-2011]
Q86UE8	772	Serine/threonine-protein	no	N/A	0.778	0.123	0.644	7e-37
O55047	718	Serine/threonine-protein	yes	N/A	0.778	0.132	0.644	7e-37
Q1ECX4	697	Serine/threonine-protein	yes	N/A	0.778	0.136	0.644	8e-37
Q8C0V0	766	Serine/threonine-protein	no	N/A	0.778	0.124	0.635	8e-37
Q9UKI8	766	Serine/threonine-protein	no	N/A	0.778	0.124	0.635	1e-36
Q08CW1	697	Serine/threonine-protein	no	N/A	0.762	0.133	0.657	8e-36
Q90ZY6	756	Serine/threonine-protein	no	N/A	0.778	0.125	0.616	2e-35
P34314	965	Serine/threonine-protein	yes	N/A	0.770	0.097	0.575	9e-30
Q39238	688	Serine/threonine-protein	yes	N/A	0.770	0.136	0.481	4e-22
Q9TW45	1192	Serine/threonine-protein	no	N/A	0.745	0.076	0.377	6e-09

>sp|Q86UE8|TLK2_HUMAN Serine/threonine-protein kinase tousled-like 2 OS=Homo sapiens GN=TLK2 PE=1 SV=2

 Score =  152 bits (383), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct: 507 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 566

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct: 567 ------------ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 601

Serine/threonine-protein kinase involved in the process of chromatin assembly and probably also DNA replication, transcription, repair, and chromosome segregation. Phosphorylates the chromatin assembly factors ASF1A AND ASF1B. Phosphorylation of ASF1A prevents its proteasome-mediated degradation, thereby enhancing chromatin assembly.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O55047|TLK2_MOUSE Serine/threonine-protein kinase tousled-like 2 OS=Mus musculus GN=Tlk2 PE=1 SV=2

 Score =  152 bits (383), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct: 453 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 512

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct: 513 ------------ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 547

Testis-specific isoforms may play a role in spermatogenesis. Highly expressed in embryos throughout development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1ECX4|TLK2_DANRE Serine/threonine-protein kinase tousled-like 2 OS=Danio rerio GN=tlk2 PE=2 SV=2

 Score =  152 bits (383), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct: 433 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 492

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSI+MQVV+ALKYLNEI+PP+IHYDLKPG  L +
Sbjct: 493 ------------ARSIIMQVVNALKYLNEIRPPIIHYDLKPGNILLV 527

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8C0V0|TLK1_MOUSE Serine/threonine-protein kinase tousled-like 1 OS=Mus musculus GN=Tlk1 PE=2 SV=2

 Score =  152 bits (383), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D ++FCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct: 501 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDTFCTVLEYCEGNDLDFYLKQHKLMSEKE 560

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSIVMQ+V+AL+YLNEIKPP+IHYDLKPG  L +
Sbjct: 561 ------------ARSIVMQIVNALRYLNEIKPPIIHYDLKPGNILLV 595

Rapidly and transiently inhibited by phosphorylation following the generation of DNA double-stranded breaks during S-phase. This is cell cycle checkpoint and ATM-pathway dependent and appears to regulate processes involved in chromatin assembly (By similarity). Isoform 3 protects the cells from the ionizing radiation by faciliting the repair of DSBs. In vitro, phosphorylates histone H3 at 'Ser-10'.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UKI8|TLK1_HUMAN Serine/threonine-protein kinase tousled-like 1 OS=Homo sapiens GN=TLK1 PE=1 SV=2

 Score =  151 bits (382), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/107 (63%), Positives = 84/107 (78%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D ++FCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct: 501 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDTFCTVLEYCEGNDLDFYLKQHKLMSEKE 560

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSIVMQ+V+AL+YLNEIKPP+IHYDLKPG  L +
Sbjct: 561 ------------ARSIVMQIVNALRYLNEIKPPIIHYDLKPGNILLV 595

Rapidly and transiently inhibited by phosphorylation following the generation of DNA double-stranded breaks during S-phase. This is cell cycle checkpoint and ATM-pathway dependent and appears to regulate processes involved in chromatin assembly. Isoform 3 phosphorylates and enhances the stability of the t-SNARE SNAP23, augmenting its assembly with syntaxin. Isoform 3 protects the cells from the ionizing radiation by faciliting the repair of DSBs. In vitro, phosphorylates histone H3 at 'Ser-10'.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q08CW1|TLK2_XENTR Serine/threonine-protein kinase tousled-like 2 OS=Xenopus tropicalis GN=tlk2 PE=2 SV=1

 Score =  148 bits (374), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 12/105 (11%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK + E+E  
Sbjct: 434 KHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMTEKE-- 491

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                     ARSI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct: 492 ----------ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 526

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q90ZY6|TLK1B_DANRE Serine/threonine-protein kinase tousled-like 1-B OS=Danio rerio GN=tlk1b PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/107 (61%), Positives = 83/107 (77%), Gaps = 12/107 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA REY IHK LDHPR+VKLYD F +D ++FCTVLE+C+G+DLDFYLKQHK ++E+E
Sbjct: 495 YHKHACREYRIHKQLDHPRIVKLYDYFSLDTDTFCTVLEFCEGNDLDFYLKQHKLMSEKE 554

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       ARSIVMQ+V+AL+YLNEIKP +IHYDLKPG  L +
Sbjct: 555 ------------ARSIVMQIVNALRYLNEIKPSIIHYDLKPGNILLV 589

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P34314|TLK1_CAEEL Serine/threonine-protein kinase tousled-like 1 OS=Caenorhabditis elegans GN=tlk-1 PE=1 SV=3

 Score =  128 bits (322), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 61/106 (57%), Positives = 77/106 (72%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HA+RE +IHK+LDH R+VK YD+  ID +SFCTVLEY  G+DLDFYLKQ+++I+E+E
Sbjct: 696 YVKHAMREKDIHKSLDHCRIVKQYDLLTIDNHSFCTVLEYVPGNDLDFYLKQNRSISEKE 755

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSI+MQVVSAL YLNE   P+IHYDLKP   L 
Sbjct: 756 ------------ARSIIMQVVSALVYLNEKSTPIIHYDLKPANILL 789

Essential for appropriate transcription during embryonic development. May act during transcription elongation to activate the RNA polymerase II large subunit (ama-1) by phosphorylating the Ser-2 residues of the C-terminal domain 7-residue repeats. Does not phosphorylate histone H3.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39238|TSL_ARATH Serine/threonine-protein kinase TOUSLED OS=Arabidopsis thaliana GN=TOUSLED PE=1 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + RHA RE  IHK+L H  +V+L+D F ID ++FCTVLEYC G DLD  LK    + E+E
Sbjct: 454 YIRHANRECEIHKSLVHHHIVRLWDKFHIDMHTFCTVLEYCSGKDLDAVLKATSNLPEKE 513

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           AR             I++Q+V  L YLN+    +IHYDLKPG  LF
Sbjct: 514 ARI------------IIVQIVQGLVYLNKKSQKIIHYDLKPGNVLF 547

Required for correct initiation of floral organ primordia and for proper development of organ primordia. Phosphorylates in vitro ASF1B/SGA1, the C-terminal part of TKI1 and histone H3.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9TW45|PAR1_CAEEL Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 15/106 (14%)

Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K LDHP +VKLY V E +   +  VLEY  G ++  YL  H 
Sbjct: 204 TALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLY-LVLEYASGGEVFDYLVAHG 262

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+E            AR+   Q+VSA++YL+     +IH DLK
Sbjct: 263 RMKEKE------------ARAKFRQIVSAVQYLHSKN--IIHRDLK 294

Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis. Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote. Critical role in postembryonic vulval morphogenesis.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
345490843	940	PREDICTED: serine/threonine-protein kina	0.770	0.1	0.820	3e-44
195393460	1271	GJ19333 [Drosophila virilis] gi|19414988	0.770	0.073	0.811	3e-44
195047815	1399	GH24215 [Drosophila grimshawi] gi|193893	0.770	0.067	0.811	3e-44
345490845	951	PREDICTED: serine/threonine-protein kina	0.770	0.098	0.820	6e-44
442615092	1265	Tousled-like kinase, isoform K [Drosophi	0.770	0.074	0.811	6e-44
345490849	855	PREDICTED: serine/threonine-protein kina	0.770	0.109	0.820	6e-44
115646482	1196	LD14750p [Drosophila melanogaster]	0.770	0.078	0.811	6e-44
345490839	876	PREDICTED: serine/threonine-protein kina	0.770	0.107	0.820	7e-44
345490847	885	PREDICTED: serine/threonine-protein kina	0.770	0.106	0.820	7e-44
221329683	1266	Tousled-like kinase, isoform F [Drosophi	0.770	0.074	0.811	9e-44

>gi|345490843|ref|XP_003426476.1| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 4 [Nasonia vitripennis]

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 658 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 717

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSIVMQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 718 ------------ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 751

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195393460|ref|XP_002055372.1| GJ19333 [Drosophila virilis] gi|194149882|gb|EDW65573.1| GJ19333 [Drosophila virilis]

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14   FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 978  YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 1037

Query: 74   ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        ARSI+MQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 1038 ------------ARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILL 1071

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195047815|ref|XP_001992419.1| GH24215 [Drosophila grimshawi] gi|193893260|gb|EDV92126.1| GH24215 [Drosophila grimshawi]

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14   FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 1105 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 1164

Query: 74   ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        ARSI+MQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 1165 ------------ARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILL 1198

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490845|ref|XP_001601609.2| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 1 [Nasonia vitripennis]

 Score =  181 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 669 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 728

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSIVMQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 729 ------------ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 762

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442615092|ref|NP_001259220.1| Tousled-like kinase, isoform K [Drosophila melanogaster] gi|440216413|gb|AGB95066.1| Tousled-like kinase, isoform K [Drosophila melanogaster]

 Score =  181 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14   FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 971  YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 1030

Query: 74   ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        ARSI+MQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 1031 ------------ARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILL 1064

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490849|ref|XP_003426478.1| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 6 [Nasonia vitripennis]

 Score =  181 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 573 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 632

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSIVMQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 633 ------------ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 666

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|115646482|gb|ABJ17069.1| LD14750p [Drosophila melanogaster]

 Score =  181 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14   FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 1013 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 1072

Query: 74   ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        ARSI+MQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 1073 ------------ARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILL 1106

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490839|ref|XP_003426474.1| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 2 [Nasonia vitripennis] gi|345490841|ref|XP_003426475.1| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 3 [Nasonia vitripennis]

 Score =  181 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 594 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 653

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSIVMQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 654 ------------ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 687

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490847|ref|XP_003426477.1| PREDICTED: serine/threonine-protein kinase tousled-like 2-like isoform 5 [Nasonia vitripennis]

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 603 YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 662

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       ARSIVMQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 663 ------------ARSIVMQVVSALKYLNEIKPPVIHYDLKPGNILL 696

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221329683|ref|NP_001138152.1| Tousled-like kinase, isoform F [Drosophila melanogaster] gi|221329687|ref|NP_001138154.1| Tousled-like kinase, isoform H [Drosophila melanogaster] gi|281359801|ref|NP_001162655.1| Tousled-like kinase, isoform J [Drosophila melanogaster] gi|5901830|gb|AAD55423.1|AF181637_1 BcDNA.GH07910 [Drosophila melanogaster] gi|220901668|gb|ACL82885.1| Tousled-like kinase, isoform F [Drosophila melanogaster] gi|220901670|gb|ACL82887.1| Tousled-like kinase, isoform H [Drosophila melanogaster] gi|272505959|gb|ACZ95192.1| Tousled-like kinase, isoform J [Drosophila melanogaster]

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 12/106 (11%)

Query: 14   FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            + +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI ERE
Sbjct: 972  YIKHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPERE 1031

Query: 74   ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        ARSI+MQVVSALKYLNEIKPPVIHYDLKPG  L 
Sbjct: 1032 ------------ARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILL 1065

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	122
FB|FBgn0086899	1489	tlk "Tousled-like kinase" [Dro	0.745	0.061	0.834	5.4e-39
RGD|1310907	460	Tlk2 "tousled-like kinase 2" [	0.778	0.206	0.644	7.4e-34
UNIPROTKB|J3KRK0	593	TLK2 "Serine/threonine-protein	0.778	0.160	0.644	2.1e-33
UNIPROTKB|J3QLK5	601	TLK2 "Serine/threonine-protein	0.778	0.158	0.644	2.3e-33
UNIPROTKB|D4A6F1	632	Tlk2 "Protein Tlk2" [Rattus no	0.778	0.150	0.644	3e-33
UNIPROTKB|E1C3U2	695	E1C3U2 "Uncharacterized protei	0.778	0.136	0.644	4.4e-33
MGI|MGI:1346023	718	Tlk2 "tousled-like kinase 2 (A	0.778	0.132	0.644	4.9e-33
UNIPROTKB|G3V6T3	718	Tlk2 "Tousled-like kinase 2 (A	0.778	0.132	0.644	4.9e-33
UNIPROTKB|F1RRU6	748	TLK2 "Uncharacterized protein"	0.778	0.127	0.644	5.6e-33
UNIPROTKB|E1BBU6	750	TLK2 "Uncharacterized protein"	0.778	0.126	0.644	5.6e-33

FB|FBgn0086899 tlk "Tousled-like kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 430 (156.4 bits), Expect = 5.4e-39, P = 5.4e-39
 Identities = 86/103 (83%), Positives = 88/103 (85%)

Query:    16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
             +HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI EREAR
Sbjct:  1197 KHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPEREAR 1256

Query:    76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPL 118
                         SI+MQVVSALKYLNEIKPPVIHYDLKPG  L
Sbjct:  1257 ------------SIIMQVVSALKYLNEIKPPVIHYDLKPGNIL 1287

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA;NAS

GO:0006468 "protein phosphorylation" evidence=ISS;IDA;NAS

GO:0006325 "chromatin organization" evidence=IGI

GO:0045448 "mitotic cell cycle, embryonic" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0051726 "regulation of cell cycle" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0016572 "histone phosphorylation" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0007155 "cell adhesion" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0007059 "chromosome segregation" evidence=IGI

RGD|1310907 Tlk2 "tousled-like kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   195 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 254

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   255 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 289

GO:0001672 "regulation of chromatin assembly or disassembly" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005882 "intermediate filament" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0007059 "chromosome segregation" evidence=ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0071480 "cellular response to gamma radiation" evidence=ISO

UNIPROTKB|J3KRK0 TLK2 "Serine/threonine-protein kinase tousled-like 2" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 2.1e-33, P = 2.1e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   421 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 480

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   481 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 515

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|J3QLK5 TLK2 "Serine/threonine-protein kinase tousled-like 2" [Homo sapiens (taxid:9606)]

 Score = 368 (134.6 bits), Expect = 2.3e-33, P = 2.3e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   336 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 395

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   396 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 430

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|D4A6F1 Tlk2 "Protein Tlk2" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 3.0e-33, P = 3.0e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   421 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 480

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   481 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 515

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E1C3U2 E1C3U2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 368 (134.6 bits), Expect = 4.4e-33, P = 4.4e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   430 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 489

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   490 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 524

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001672 "regulation of chromatin assembly or disassembly" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005882 "intermediate filament" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0071480 "cellular response to gamma radiation" evidence=IEA

MGI|MGI:1346023 Tlk2 "tousled-like kinase 2 (Arabidopsis)" [Mus musculus (taxid:10090)]

 Score = 368 (134.6 bits), Expect = 4.9e-33, P = 4.9e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   453 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 512

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   513 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 547

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001672 "regulation of chromatin assembly or disassembly" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005882 "intermediate filament" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0007059 "chromosome segregation" evidence=ISO

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0030154 "cell differentiation" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA

GO:0071480 "cellular response to gamma radiation" evidence=ISO

UNIPROTKB|G3V6T3 Tlk2 "Tousled-like kinase 2 (Arabidopsis) (Predicted), isoform CRA_b" [Rattus norvegicus (taxid:10116)]

 Score = 368 (134.6 bits), Expect = 4.9e-33, P = 4.9e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   453 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 512

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   513 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 547

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1RRU6 TLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 368 (134.6 bits), Expect = 5.6e-33, P = 5.6e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   483 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 542

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   543 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 577

GO:0071480 "cellular response to gamma radiation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005882 "intermediate filament" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001672 "regulation of chromatin assembly or disassembly" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|E1BBU6 TLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 368 (134.6 bits), Expect = 5.6e-33, P = 5.6e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)

Query:    14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + +HA REY IHK LDHPR+VKLYD F +D +SFCTVLEYC+G+DLDFYLKQHK ++E+E
Sbjct:   485 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKE 544

Query:    74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
             AR            SI+MQ+V+ALKYLNEIKPP+IHYDLKPG  L +
Sbjct:   545 AR------------SIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV 579

GO:0071480 "cellular response to gamma radiation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005882 "intermediate filament" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001672 "regulation of chromatin assembly or disassembly" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34314	TLK1_CAEEL	2, ., 7, ., 1, 1, ., 1	0.5754	0.7704	0.0974	yes	N/A
Q1ECX4	TLK2_DANRE	2, ., 7, ., 1, 1, ., 1	0.6448	0.7786	0.1362	yes	N/A
O55047	TLK2_MOUSE	2, ., 7, ., 1, 1, ., 1	0.6448	0.7786	0.1323	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	122
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-23
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-19
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-19
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-15
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-10
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-09
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-09
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	9e-09
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-08
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	7e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-08
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	8e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-07
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-07
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-06
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	9e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	6e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	7e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	7e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.001
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.001
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.001
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	0.001
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.001
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.001
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.001
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.002
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.002
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.002
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.002
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.002
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	0.003
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.004
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.004
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.004
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.004
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 89.5 bits (223), Expect = 5e-23
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
                LRE  I K L HP +V+LYDVFE D +    V+EYC+G DL   LK+   ++E E
Sbjct: 40  DRERILREIKILKKLKHPNIVRLYDVFE-DEDKLYLVMEYCEGGDLFDLLKKRGRLSEDE 98

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           AR   +            Q++SAL+YL+     ++H DLKP
Sbjct: 99  ARFYLR------------QILSALEYLHSKG--IVHRDLKP 125

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 79.6 bits (197), Expect = 3e-19
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + A RE  I + L HP +V+L D FE D +    V+EYC+G DL  YL +   ++E E
Sbjct: 41  KDQTARREIRILRRLSHPNIVRLIDAFE-DKDHLYLVMEYCEGGDLFDYLSRGGPLSEDE 99

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           A+             I +Q++  L+YL+     +IH DLKP
Sbjct: 100 AKK------------IALQILRGLEYLHSNG--IIHRDLKP 126

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 78.4 bits (194), Expect = 4e-19
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 16/112 (14%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFY 62
           K++    +       LRE  I K L+HP +VKLY VFE D N    V+EYC+G  L D  
Sbjct: 24  KIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-DENHLYLVMEYCEGGSLKDLL 82

Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +    ++E E               I++Q++  L+YL+     +IH DLKP
Sbjct: 83  KENEGKLSEDE------------ILRILLQILEGLEYLHSNG--IIHRDLKP 120

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           AL E  I K L+HP ++K Y+ FE +    C V+EY DG DL   +K+ K          
Sbjct: 46  ALNEVKILKKLNHPNIIKYYESFE-EKGKLCIVMEYADGGDLSQKIKKQKKE-------- 96

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +P+         +Q+  ALKYL+  K  ++H D+KP
Sbjct: 97  GKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKP 131

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E NI   ++HP +VKL+  F+        VLEY  G +L  +L +    +E  AR 
Sbjct: 39  HTLTERNILSRINHPFIVKLHYAFQ-TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARF 97

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        ++V AL+YL+ +   +I+ DLKP
Sbjct: 98  ----YAA--------EIVLALEYLHSLG--IIYRDLKP 121

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  ALRE ++ K L HP +VKL DV          V EYCD  DL  YL +        
Sbjct: 41  IPSTALREISLLKELKHPNIVKLLDVI-HTERKLYLVFEYCD-MDLKKYLDKRPGP---- 94

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              LS   +    +SI+ Q++  L Y +  +  ++H DLKP
Sbjct: 95  ---LSPNLI----KSIMYQLLRGLAYCHSHR--ILHRDLKP 126

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 17/103 (16%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKT-IAE 71
           FP  A+RE  + + L HP +V+L + V      S   V EY D HDL   L   +    E
Sbjct: 41  FPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTE 99

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            + +C  +            Q++  L+YL+     ++H D+K 
Sbjct: 100 SQIKCYMK------------QLLEGLQYLHSNG--ILHRDIKG 128

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR-CL 77
           L+E  + K L HP VV+L  V   +      VLEY +G DL  YL++ + +     +  L
Sbjct: 44  LKEARVMKKLGHPNVVRLLGVC-TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTL 102

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
           S   L     S  +Q+   ++YL   K   +H DL
Sbjct: 103 SLKDL----LSFAIQIAKGMEYLASKK--FVHRDL 131

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 54.4 bits (132), Expect = 5e-10
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E +I K L HP +V+L  V          V EY  G DL  +L++H          L+
Sbjct: 49  LEEASIMKKLSHPNIVRLLGVC-TQGEPLYIVTEYMPGGDLLDFLRKHG-------EKLT 100

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      + +Q+   ++YL       +H DL
Sbjct: 101 LKDL----LQMALQIAKGMEYLESKN--FVHRDL 128

Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.7 bits (130), Expect = 7e-10
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 13/107 (12%)

Query: 14  FPRHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
                LRE  I  +L+HP  +VKLYD F+ +  S   V+EY DG  L+  LK+       
Sbjct: 40  EVERFLREIQILASLNHPPNIVKLYDFFQDE-GSLYLVMEYVDGGSLEDLLKKIGR---- 94

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                  P   + A  I+ Q++SAL+YL+     +IH D+KP   L 
Sbjct: 95  -----KGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILL 134

Length = 384

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTV-LEYCDGHDL 59
              K +TT+ N    +  LRE  I+K+   P +VK Y  F  +++S   + +EYC+G  L
Sbjct: 29  FALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSL 88

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           D   K+   + +R  R   +         I   V+  L YL+  K  +IH D+KP
Sbjct: 89  DSIYKK---VKKRGGRIGEKVLG-----KIAESVLKGLSYLHSRK--IIHRDIKP 133

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K+    L    P  ALRE    +A  HP VVKL DVF    + F  V+EY    DL   L
Sbjct: 32  KVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-HGSGFVLVMEYM-PSDLSEVL 89

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +        E R L +       +S +  ++  + Y++     ++H DLKP
Sbjct: 90  R-------DEERPLPEA----QVKSYMRMLLKGVAYMHANG--IMHRDLKP 127

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +   E  +  +   HP ++KLY  F+ D  +   VLEY    +L  Y++++ ++ E+   
Sbjct: 47  YVKIEKEVLTRLNGHPGIIKLYYTFQ-DEENLYFVLEYAPNGELLQYIRKYGSLDEK--- 102

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      R    +++ AL+YL+     +IH DLKP
Sbjct: 103 ---------CTRFYAAEILLALEYLHSKG--IIHRDLKP 130

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 9e-09
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +  L E  I   LDHP +  LY  F+ +    C V++YC G +L       + +  +  +
Sbjct: 46  KRVLTEQEILATLDHPFLPTLYASFQTETY-LCLVMDYCPGGEL------FRLLQRQPGK 98

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           CLS       AR    +V+ AL+YL+ +   +++ DLKP
Sbjct: 99  CLS----EEVARFYAAEVLLALEYLHLLG--IVYRDLKP 131

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 12/104 (11%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
            A +E  +   LDHP +VK +  F ++ ++FC + EYC+G DLD  L++ K   +     
Sbjct: 48  QANQEAQLLSKLDHPAIVKFHASF-LERDAFCIITEYCEGRDLDCKLEELKHTGKT---- 102

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
           LS+  +        +Q++  + Y+++ +  ++H DLK  K +FL
Sbjct: 103 LSENQVC----EWFIQLLLGVHYMHQRR--ILHRDLK-AKNIFL 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 14/99 (14%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E +I     HP +V LY+ +  + N    ++E+CDG  LD       +I     R L++P
Sbjct: 52  EIDILSECKHPNIVGLYEAYFYE-NKLWILIEFCDGGALD-------SIMLELERGLTEP 103

Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            +    R +  Q++ AL +L+  K  VIH DLK G  L 
Sbjct: 104 QI----RYVCRQMLEALNFLHSHK--VIHRDLKAGNILL 136

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
             L E +I      P VVKLY  F     +   V+EY  G DL   L+   ++ E     
Sbjct: 39  QVLTERDILSQAQSPYVVKLYYSF-QGKKNLYLVMEYLPGGDLASLLENVGSLDE----- 92

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    AR  + ++V AL+YL+     +IH DLKP
Sbjct: 93  -------DVARIYIAEIVLALEYLHSNG--IIHRDLKP 121

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 16/95 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  I + LDHP VVKL  V   +      V+EY +G DL  YL++++           
Sbjct: 49  LREARIMRKLDHPNVVKLLGVC-TEEEPLYIVMEYMEGGDLLSYLRKNR----------- 96

Query: 79  QPYLSTSAR-SIVMQVVSALKYLNEIKPPVIHYDL 112
            P LS S   S  +Q+   ++YL       IH DL
Sbjct: 97  -PKLSLSDLLSFALQIARGMEYLESK--NFIHRDL 128

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 15/94 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E ++ K L HP +VK     E  ++S   +LEY +   L   +K+     E        
Sbjct: 48  QEIDLLKNLKHPNIVKYIGSIE-TSDSLYIILEYAENGSLRQIIKKFGPFPESLVAV--- 103

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            Y+         QV+  L YL+E    VIH D+K
Sbjct: 104 -YVY--------QVLQGLAYLHEQG--VIHRDIK 126

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 48.7 bits (117), Expect = 6e-08
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 15/101 (14%)

Query: 16  RHAL-REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           R  L RE    ++ + P VVK Y  F         VLEY DG  L   LK+   I E   
Sbjct: 43  RKQLLRELKTLRSCESPYVVKCYGAF-YKEGEISIVLEYMDGGSLADLLKKVGKIPE--- 98

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                P L+  AR    Q++  L YL+  +  +IH D+KP 
Sbjct: 99  -----PVLAYIAR----QILKGLDYLHTKR-HIIHRDIKPS 129

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 48.9 bits (116), Expect = 7e-08
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 14/99 (14%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E +I  + DHP +VKL D F  + N+   ++E+C G  +D  + +           L +P
Sbjct: 52  EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 99

Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                 R +  Q + AL YL+E K  +IH DLK G  LF
Sbjct: 100 LTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILF 136

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 15/98 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            RE  I  +L HP +V+ Y    + + N+    LEY  G  L   LK+   + E   R  
Sbjct: 47  EREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKY 106

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           ++            Q++  L YL+     ++H D+K  
Sbjct: 107 TR------------QILEGLAYLHSNG--IVHRDIKGA 130

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 15/102 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
           FP  +LRE NI   L HP +V + + V   + +    V+EY + HDL       K++ E 
Sbjct: 47  FPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDL-------KSLMET 98

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               + QP+L +  + +++Q++S + +L++    ++H DLK 
Sbjct: 99  ----MKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKT 134

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           R+ L E  I + L+HP +V L+  F+ + N +  V++   G DL ++L Q    +E    
Sbjct: 45  RNVLNERRILQELNHPFLVNLWYSFQDEENMY-LVVDLLLGGDLRYHLSQKVKFSE---- 99

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      +  + ++V AL+YL+     +IH D+KP
Sbjct: 100 --------EQVKFWICEIVLALEYLHSKG--IIHRDIKP 128

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 48.3 bits (116), Expect = 9e-08
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 13/94 (13%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  I + LDHP +VKL  V   +      V+EY  G DL  YL++++       + LS
Sbjct: 49  LREARIMRKLDHPNIVKLLGVC-TEEEPLMIVMEYMPGGDLLDYLRKNR------PKELS 101

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L     S  +Q+   ++YL       IH DL
Sbjct: 102 LSDLL----SFALQIARGMEYLESKN--FIHRDL 129

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 17/116 (14%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDL 59
           M  K +   +N    +  LRE +I    + P +V  Y  F  + + S C  +EY DG  L
Sbjct: 29  MAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC--MEYMDGGSL 86

Query: 60  DFYLKQ-HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           D  LK+    I ER         L      I + V+  L YL+E K  +IH D+KP
Sbjct: 87  DKILKEVQGRIPER--------ILG----KIAVAVLKGLTYLHE-KHKIIHRDVKP 129

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 19/100 (19%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLK----QHKTIAEREA 74
           L+E ++ K LDHP V+K    F I+ N    VLE  D  DL   +K    Q + I ER  
Sbjct: 50  LKEIDLLKQLDHPNVIKYLASF-IENNELNIVLELADAGDLSRMIKHFKKQKRLIPER-- 106

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     +     +Q+ SAL++++  +  ++H D+KP
Sbjct: 107 ----------TIWKYFVQLCSALEHMHSKR--IMHRDIKP 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 14/97 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  I K   HP +VK Y  + +  +    V+E+C G  L   LK          + L+
Sbjct: 45  INEIQILKKCKHPNIVKYYGSY-LKKDELWIVMEFCSGGSLKDLLKSTN-------QTLT 96

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +  ++   +    +++  L+YL+     +IH D+K  
Sbjct: 97  ESQIAYVCK----ELLKGLEYLHSNG--IIHRDIKAA 127

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           A+ E  I  +++HP ++   + F +D N  C V+EY    DL   + + K          
Sbjct: 46  AVNEIRILASVNHPNIISYKEAF-LDGNKLCIVMEYAPFGDLSKAISKRKK--------K 96

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA 122
            +         I +Q++  L+ L+E K  ++H DLK    + L A
Sbjct: 97  RKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSAN-ILLVA 138

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L H  +V+L+DV   + N    V EY D  DL  Y+  H     R A
Sbjct: 42  PSTAIREISLMKELKHENIVRLHDVIHTE-NKLMLVFEYMDK-DLKKYMDTH---GVRGA 96

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              +        +S   Q++  + + +E +  V+H DLKP
Sbjct: 97  LDPNT------VKSFTYQLLKGIAFCHENR--VLHRDLKP 128

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  I +++ HP +V LY  F+ D ++   V+EY  G +L  +L        R++  
Sbjct: 47  HVLNEKRILQSIRHPFLVNLYGSFQ-DDSNLYLVMEYVPGGELFSHL--------RKSGR 97

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             +P     AR    QVV AL+YL+ +   +++ DLKP
Sbjct: 98  FPEPV----ARFYAAQVVLALEYLHSLD--IVYRDLKP 129

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 15/100 (15%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  ALRE  + K L H  +V+LYDV   D      V EYCD  DL  Y            
Sbjct: 43  PSSALREICLLKELKHKNIVRLYDVLHSD-KKLTLVFEYCD-QDLKKYFDS--------- 91

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            C          +S + Q++  L + +     V+H DLKP
Sbjct: 92  -CNGDIDPEI-VKSFMFQLLKGLAFCHSHN--VLHRDLKP 127

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
              H   E  I +  +HP +VKLY  F+ D      ++EYC G +L   L+      E  
Sbjct: 36  QQEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILRDRGLFDEYT 94

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       AR  +  VV A +YL+     +I+ DLKP
Sbjct: 95  ------------ARFYIACVVLAFEYLHNRG--IIYRDLKP 121

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 15/113 (13%)

Query: 2   CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 61
             K+     +   P+ ALRE  + K L+HP ++KL DVF         V E+ D  DL  
Sbjct: 29  IKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-HKGDLYLVFEFMD-TDL-- 84

Query: 62  YLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  + +   R L +  +    +S + Q++  L + +     ++H DLKP
Sbjct: 85  -----YKLIKDRQRGLPESLI----KSYLYQLLQGLAFCH--SHGILHRDLKP 126

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 19/99 (19%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           R   RE  I + ++HP VVK +D+F+        +LE+ DG  L+               
Sbjct: 117 RQICREIEILRDVNHPNVVKCHDMFD-HNGEIQVLLEFMDGGSLE------------GTH 163

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              + +L+  AR    Q++S + YL+     ++H D+KP
Sbjct: 164 IADEQFLADVAR----QILSGIAYLHRRH--IVHRDIKP 196

Length = 353

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 30  HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
           HP +VKL +VF  + +    V EY +G+              R+ +  S+       RSI
Sbjct: 57  HPNIVKLKEVF-RENDELYFVFEYMEGNLYQLMKD-------RKGKPFSES----VIRSI 104

Query: 90  VMQVVSALKYLNEIKPPVIHYDLKP 114
           + Q++  L +++  K    H DLKP
Sbjct: 105 IYQILQGLAHIH--KHGFFHRDLKP 127

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 13/106 (12%)

Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T L+    R AL E  I   L HP ++  Y+ F +D N+    +EY +G  L      + 
Sbjct: 36  TRLSEKERRDALNEIVILSLLQHPNIIAYYNHF-MDDNTLLIEMEYANGGTL------YD 88

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            I  ++ +   +  +       + Q+VSA+ Y+++    ++H D+K
Sbjct: 89  KIVRQKGQLFEEEMVL----WYLFQIVSAVSYIHKAG--ILHRDIK 128

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 27/121 (22%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-------SFCTVLEYCDG 56
           K+L  N    FP  ALRE  I + L H  VV L ++    A        SF  V E+C+ 
Sbjct: 44  KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE- 102

Query: 57  HDLDFYLKQHKTIAEREARCLSQPYLSTS---ARSIVMQVVSALKYLNEIKPPVIHYDLK 113
           HDL              A  LS   +  +    + ++  +++ L Y++  K  ++H D+K
Sbjct: 103 HDL--------------AGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMK 146

Query: 114 P 114
            
Sbjct: 147 A 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 29/112 (25%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVF-------------EIDANSFCTVLEYCDGHDLDFY 62
           +HALRE  I + LDH  +VK+Y+V                + NS   V EY +  DL   
Sbjct: 47  KHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANV 105

Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           L+Q              P     AR  + Q++  LKY++     V+H DLKP
Sbjct: 106 LEQ-------------GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKP 142

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 15/100 (15%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           P  +LRE  +   L HP +V+L +V      +S   V+EYC+  DL   L          
Sbjct: 50  PISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDN-------- 100

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
              +  P+  +  + +++Q++  L+YL+E    +IH DLK
Sbjct: 101 ---MPTPFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLK 135

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 21/105 (20%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAE 71
           +  LRE  + + L H  ++ L D+    +    N    V E  +  DL      HK I  
Sbjct: 44  KRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDL------HKVIK- 95

Query: 72  REARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                 S   L+    +  + Q++  LKYL+     VIH DLKP 
Sbjct: 96  ------SPQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPS 132

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 43.3 bits (102), Expect = 6e-06
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 13/106 (12%)

Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           + +N      A+ E  +   LD   +++ Y+ F +D      V+EY +  DL   LK  +
Sbjct: 36  SKMNRREREEAIDEARVLAKLDSSYIIRYYESF-LDKGKLNIVMEYAENGDLHKLLKMQR 94

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                      +P          +Q++  L +L+  K  ++H D+K
Sbjct: 95  ----------GRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIK 128

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L+HP +V+L DV   +   +  V E+ D  DL  Y+           
Sbjct: 42  PSTAIREISLLKELNHPNIVRLLDVVHSENKLY-LVFEFLD-LDLKKYMDSSPLTGLDPP 99

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       +S + Q++  + Y +  +  V+H DLKP
Sbjct: 100 L----------IKSYLYQLLQGIAYCHSHR--VLHRDLKP 127

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 21/108 (19%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDL----DFYLKQHKTIAEREAR 75
           E NI + L HP +V+ YD     +N +   V+EYC+G DL        K+ K I E    
Sbjct: 49  EVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEF-- 106

Query: 76  CLSQPYLSTSARSIVMQVVSALK---YLNEIKPPVIHYDLKPGKPLFL 120
                        I+ Q++ AL      ++    V+H DLKP   +FL
Sbjct: 107 ----------IWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN-IFL 143

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 22/108 (20%)

Query: 15  PRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQHK 67
           P   LRE  + K L+   HP +V+L DV              V E+ D  DL  YL +  
Sbjct: 42  PLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKC- 99

Query: 68  TIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      +P L     + ++ Q++  + +L+  +  ++H DLKP
Sbjct: 100 ----------PKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKP 135

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 8e-06
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           A RE  + + L H  VV L +VF   A+ S   + +Y + HDL   +K H+    +  R 
Sbjct: 49  ACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHR----QAKRV 103

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              P +    +S++ Q+++ + YL+     V+H DLKP
Sbjct: 104 SIPPSM---VKSLLWQILNGVHYLHS--NWVLHRDLKP 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE ++ + L H  VV+L  +   +A     +LEY D  D    LKQ     + +   L  
Sbjct: 57  RELDMFRKLSHKNVVRLLGLCR-EAEPHYMILEYTDLGD----LKQFLRATKSKDEKLKP 111

Query: 80  PYLSTSAR-SIVMQVVSALKYLNEIKPPVIHYDL 112
           P LST  + ++  Q+   + +L+  +   +H DL
Sbjct: 112 PPLSTKQKVALCTQIALGMDHLSNAR--FVHRDL 143

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  I    +HP +VKL   F  D      ++E+C G  +D        + E + R L++P
Sbjct: 59  EIEILATCNHPYIVKLLGAFYWD-GKLWIMIEFCPGGAVD------AIMLELD-RGLTEP 110

Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            +    + I  Q++ AL+YL+ +K  +IH DLK G  L 
Sbjct: 111 QI----QVICRQMLEALQYLHSMK--IIHRDLKAGNVLL 143

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           + ALRE  + + L H  +V L + F      +  V EY +   L+  L+        +A 
Sbjct: 45  KTALREVKVLRQLRHENIVNLKEAFRRKGRLY-LVFEYVERTLLE-LLEASPGGLPPDA- 101

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      RS + Q++ A+ Y +     +IH D+KP
Sbjct: 102 ----------VRSYIWQLLQAIAYCHSHN--IIHRDIKP 128

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 16/94 (17%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE ++   LDHP +V+L  V +        V+E      L  YLK+ + I   + + L 
Sbjct: 44  LREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL- 100

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
                        QV   + YL       +H DL
Sbjct: 101 -----------AHQVAMGMAYLESKH--FVHRDL 121

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.1 bits (96), Expect = 4e-05
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 16  RHALREYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
            H + E N+  K L HP +V L+  F+  A     VL+Y +G +L F+L       +RE 
Sbjct: 40  NHIMAERNVLLKNLKHPFLVGLHYSFQT-AEKLYFVLDYVNGGELFFHL-------QRE- 90

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           RC  +P     AR    +V SA+ YL+ +   +I+ DLKP
Sbjct: 91  RCFLEP----RARFYAAEVASAIGYLHSLN--IIYRDLKP 124

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  + + L HP +VK Y V E+        +EYC G  L+  L+  + + E     + +
Sbjct: 48  DEMKVLELLKHPNLVKYYGV-EVHREKVYIFMEYCSGGTLEELLEHGRILDEH----VIR 102

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            Y         +Q++  L YL+     ++H D+KP
Sbjct: 103 VY--------TLQLLEGLAYLHSHG--IVHRDIKP 127

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 5e-05
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 21/107 (19%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKT 68
           F + A RE  + K + H  V+ L DVF  D      + F  V+ +  G DL   +K  K 
Sbjct: 57  FAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKL 115

Query: 69  IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             +R              + +V Q++  LKY++     +IH DLKPG
Sbjct: 116 SEDR-------------IQFLVYQMLKGLKYIHAAG--IIHRDLKPG 147

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 19/100 (19%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  + K L H R+V+ Y     D  +    +EY  G  +   LK +  + E         
Sbjct: 54  EIQLLKNLQHERIVQYYGCLRDDE-TLSIFMEYMPGGSVKDQLKAYGALTE--------- 103

Query: 81  YLSTSARSIVMQVVSALKYL--NEIKPPVIHYDLKPGKPL 118
              T  R    Q++  ++YL  N I    +H D+K    L
Sbjct: 104 ---TVTRKYTRQILEGVEYLHSNMI----VHRDIKGANIL 136

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 40.0 bits (94), Expect = 7e-05
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  I   L  P + +L  V  +D    C ++EY +  DL+ +L++H  +AE      +
Sbjct: 67  LKEVKILSRLSDPNIARLLGVCTVD-PPLCMIMEYMENGDLNQFLQKH--VAETSGLACN 123

Query: 79  QPYLSTSA-RSIVMQVVSALKYLNEIKPPVIHYDL 112
              LS S    +  Q+ S ++YL  +    +H DL
Sbjct: 124 SKSLSFSTLLYMATQIASGMRYLESLN--FVHRDL 156

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 15/97 (15%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           ALRE  + + L HP ++ L DVF   +N    V E+ +  DL+      K I ++    L
Sbjct: 49  ALREIKLLQELKHPNIIGLLDVFGHKSN-INLVFEFMET-DLE------KVIKDKSIV-L 99

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +   +    +S ++  +  L+YL+     ++H DLKP
Sbjct: 100 TPADI----KSYMLMTLRGLEYLHSNW--ILHRDLKP 130

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 40.0 bits (93), Expect = 9e-05
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 15/88 (17%)

Query: 26  KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTS 85
           +A +HP +V L+  F+ ++  F  V+EY +G DL F++++ + + E  AR  S       
Sbjct: 51  QASNHPFLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSA------ 103

Query: 86  ARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                 ++  AL YL+E    +I+ DLK
Sbjct: 104 ------EISLALNYLHE--RGIIYRDLK 123

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.9 bits (93), Expect = 9e-05
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  I   L  P +++L  V  I ++  C + EY +  DL+ +L +H+   +  A    
Sbjct: 67  LKEIKIMSRLKDPNIIRLLAVC-ITSDPLCMITEYMENGDLNQFLSRHE--PQEAAEKAD 123

Query: 79  QPYLS-TSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              +S ++   +  Q+ S +KYL+ +    +H DL
Sbjct: 124 VVTISYSTLIFMATQIASGMKYLSSLN--FVHRDL 156

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L+HP +VKL DV   + N    V E+     L   LK+    +    
Sbjct: 43  PSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEF-----LHQDLKKFMDASPLSG 96

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             L         +S + Q++  L + +  +  V+H DLKP
Sbjct: 97  IPLPL------IKSYLFQLLQGLAFCHSHR--VLHRDLKP 128

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 15/98 (15%)

Query: 21  EYNIHKAL-DHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           EYNI KAL DHP VVK Y ++      + +    VLE C+G  +   +K      ER   
Sbjct: 64  EYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGER--- 120

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + +P ++     I+ + +  L++L+  K   IH D+K
Sbjct: 121 -MEEPIIAY----ILHEALMGLQHLHVNK--TIHRDVK 151

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 19/101 (18%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD----FYLKQHKTIAEREA 74
           ++E ++ K L+HP V+K  D F I+ N    VLE  D  DL     ++ KQ + I ER  
Sbjct: 50  VKEIDLLKQLNHPNVIKYLDSF-IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPER-- 106

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                     +     +Q+ SA+++++  +  V+H D+KP 
Sbjct: 107 ----------TVWKYFVQLCSAVEHMHSRR--VMHRDIKPA 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 19/101 (18%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD----FYLKQHKTIAEREA 74
           ++E ++ K L+HP V+K Y  F I+ N    VLE  D  DL      + KQ + I E+  
Sbjct: 50  IKEIDLLKQLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEK-- 106

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                     +     +Q+ SAL++++  +  V+H D+KP 
Sbjct: 107 ----------TVWKYFVQLCSALEHMHSRR--VMHRDIKPA 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 15/97 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  + K   HP +  L   F+   +  C V+EY +G +L F+L + +  +E   R 
Sbjct: 41  HTLTESRVLKNTRHPFLTSLKYSFQTK-DRLCFVMEYVNGGELFFHLSRERVFSEDRTRF 99

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL YL+  K  +++ DLK
Sbjct: 100 YGA------------EIVSALDYLHSGK--IVYRDLK 122

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 20/103 (19%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K + H  +V+L DV   +   +  V EY     LD  LK+H        
Sbjct: 45  PSTAIREISLLKEMQHGNIVRLQDVVHSEKRLY-LVFEY-----LDLDLKKHMD------ 92

Query: 75  RCLSQPYLSTSARSIVM---QVVSALKYLNEIKPPVIHYDLKP 114
              S P  + + R I     Q++  + Y +  +  V+H DLKP
Sbjct: 93  ---SSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKP 130

Length = 294

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +  +E  AR 
Sbjct: 41  HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 99

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL YL+  K  V++ DLK
Sbjct: 100 YGA------------EIVSALDYLHSEK-NVVYRDLK 123

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 16/106 (15%)

Query: 10  LNLPFPRHALREYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 68
           LN    +H + E N+  K + HP +V L+  F+        VL++ +G +L F+L++ ++
Sbjct: 34  LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVNGGELFFHLQRERS 92

Query: 69  IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             E              AR    ++ SAL YL+ I   +++ DLKP
Sbjct: 93  FPE------------PRARFYAAEIASALGYLHSIN--IVYRDLKP 124

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 16/100 (16%)

Query: 16  RHALREYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           +H + E N+  K + HP +V L+  F+  A+    VL+Y +G +L F+L       +RE 
Sbjct: 40  KHIMAERNVLLKNVKHPFLVGLHYSFQ-TADKLYFVLDYVNGGELFFHL-------QRE- 90

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           R   +P     AR    ++ SAL YL+ +   +I+ DLKP
Sbjct: 91  RSFPEP----RARFYAAEIASALGYLHSLN--IIYRDLKP 124

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 15/97 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +  +E  AR 
Sbjct: 41  HTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARF 99

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL YL+     V++ DLK
Sbjct: 100 YGA------------EIVSALGYLHSCD--VVYRDLK 122

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 21/117 (17%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVF-------EIDANSFCTVLEYCDG 56
           K+L  N    FP  ALRE  I K L HP VV L D+        +    S   V  Y D 
Sbjct: 40  KILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD- 98

Query: 57  HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
           HDL   L       E  +  L++       +  ++Q++  + YL+E    ++H D+K
Sbjct: 99  HDLSGLL-------ENPSVKLTES----QIKCYMLQLLEGINYLHENH--ILHRDIK 142

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  I K   HP +V  YD + +  +    V+EY DG  L   + Q+          ++
Sbjct: 63  INEILIMKDCKHPNIVDYYDSYLVG-DELWVVMEYMDGGSLTDIITQNFVR-------MN 114

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
           +P ++   R    +V+  L+YL+     VIH D+K
Sbjct: 115 EPQIAYVCR----EVLQGLEYLH--SQNVIHRDIK 143

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 16/88 (18%)

Query: 26  KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTS 85
           +    P + K Y  + +       ++EY +G  +   +K         A  +++ Y+S  
Sbjct: 57  RQSQPPNITKYYGSY-LKGPRLWIIMEYAEGGSVRTLMK---------AGPIAEKYISV- 105

Query: 86  ARSIVMQVVSALKYLNEIKPPVIHYDLK 113
              I+ +V+ ALKY++  K  VIH D+K
Sbjct: 106 ---IIREVLVALKYIH--KVGVIHRDIK 128

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 16/100 (16%)

Query: 16  RHALREYNIH-KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           +H + E N+  K + HP +V L+  F+  A+    VL+Y +G +L ++L++         
Sbjct: 40  KHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYINGGELFYHLQRE-------- 90

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           RC  +P     AR    ++ SAL YL+ +   +++ DLKP
Sbjct: 91  RCFLEP----RARFYAAEIASALGYLHSLN--IVYRDLKP 124

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           ALRE  + K L HP +V L +VF         V EYCD          H  + E E    
Sbjct: 47  ALREIRMLKQLKHPNLVNLIEVFR-RKRKLHLVFEYCD----------HTVLNELEKNPR 95

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             P      + I+ Q + A+ + ++     IH D+KP
Sbjct: 96  GVPEHLI--KKIIWQTLQAVNFCHKHN--CIHRDVKP 128

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 15/97 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H + E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +   E  AR 
Sbjct: 41  HTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARF 99

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL+YL+     V++ D+K
Sbjct: 100 YGA------------EIVSALEYLHSRD--VVYRDIK 122

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 36.8 bits (85), Expect = 0.001
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 14/103 (13%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAER 72
           F + A RE  + K + H  V+ L DVF   A S           +  DFYL       + 
Sbjct: 57  FAKRAYRELTLLKHMQHENVIGLLDVF-TSAVSG---------DEFQDFYLVMPYMQTDL 106

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           + + +  P      + +V Q++  LKY++     +IH DLKPG
Sbjct: 107 Q-KIMGHPLSEDKVQYLVYQMLCGLKYIH--SAGIIHRDLKPG 146

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 16/119 (13%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDL 59
           M  KL+   +        +RE  +    + P +V  Y  F  D   S C  +E+ DG  L
Sbjct: 33  MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC--MEHMDGGSL 90

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPL 118
           D  LK+ K I E     +S            + V+  L YL E K  ++H D+KP   L
Sbjct: 91  DQVLKEAKRIPEEILGKVS------------IAVLRGLAYLRE-KHQIMHRDVKPSNIL 136

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 16/101 (15%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVL-EYCDGHDLDFYLKQ-HKTIAEREARCLS 78
           E N+ + L H  +V+  D F   AN    +L E+CD  DL   +++ +K   + E   + 
Sbjct: 62  EVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIV 121

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIK-----PPVIHYDLKP 114
                     I  Q++ AL Y + +K       V+H DLKP
Sbjct: 122 ---------DITRQLLHALAYCHNLKDGPNGERVLHRDLKP 153

Length = 1021

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H   E +I    D+P VVKLY  F+ D N    ++EY  G D+   L +  T  E E R 
Sbjct: 47  HVRAERDILAEADNPWVVKLYYSFQ-DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRF 105

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y++ +  +I    +  L Y        IH D+KP
Sbjct: 106 ----YIAETILAI--DSIHKLGY--------IHRDIKP 129

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGH----DLDFYLKQHK 67
             +   RE  + K +DH  V+ L DVF   +    F  V  Y   H    DL+  +K  K
Sbjct: 57  HAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDV--YLVTHLMGADLNNIVKCQK 114

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                    LS  ++    + +V Q++  LKY++     +IH DLKP 
Sbjct: 115 ---------LSDDHI----QFLVYQILRGLKYIHSAG--IIHRDLKPS 147

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 19/97 (19%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREARCL 77
           L+E  I K L H ++V+LY V   +      V EY   G  LD +LK        E + L
Sbjct: 49  LQEAQIMKKLRHDKLVQLYAVCS-EEEPIYIVTEYMSKGSLLD-FLK------SGEGKKL 100

Query: 78  SQPYLSTSARSIVM--QVVSALKYLNEIKPPVIHYDL 112
             P L      + M  Q+   + YL       IH DL
Sbjct: 101 RLPQL------VDMAAQIAEGMAYLESRN--YIHRDL 129

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 15/87 (17%)

Query: 27  ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSA 86
           A +HP +V L+  F+ ++  F  V+E+  G DL F++++ + + E  AR  S        
Sbjct: 52  ASNHPFLVGLHSCFQTESRLF-FVIEFVSGGDLMFHMQRQRKLPEEHARFYSA------- 103

Query: 87  RSIVMQVVSALKYLNEIKPPVIHYDLK 113
                ++  AL +L+E    +I+ DLK
Sbjct: 104 -----EISLALNFLHE--RGIIYRDLK 123

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +RE  +    + P +V  Y  F  D       +E+ DG  LD  LK+   I E       
Sbjct: 47  IRELKVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGSLDQVLKKAGRIPE------- 98

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              L      I + V+  L YL E K  ++H D+KP
Sbjct: 99  -NILG----KISIAVLRGLTYLRE-KHKIMHRDVKP 128

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  I   L +P +++L  V  +  +  C + EY +  DL+ +L Q + I        +
Sbjct: 65  LKEIKIMSRLKNPNIIRLLGVC-VSDDPLCMITEYMENGDLNQFLSQ-REIESTFTHANN 122

Query: 79  QPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDL 112
            P +S +    + +Q+ S +KYL  +    +H DL
Sbjct: 123 IPSVSIANLLYMAVQIASGMKYLASLN--FVHRDL 155

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 10/55 (18%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDV---------FEIDANSFCTVLEYCDGHDL 59
           FP  A+RE  I + L+H  +V L ++         F+ D  +F  V EY D HDL
Sbjct: 49  FPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD-HDL 102

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK--------TIA 70
           L+E  I   L  P +++L  V  +D +  C + EY +  DL+ +L  H           A
Sbjct: 67  LKEVKILSRLKDPNIIRLLGVC-VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDA 125

Query: 71  EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              A CL     S S   + +Q+ S +KYL+ +    +H DL
Sbjct: 126 VPPAHCLPAISYS-SLLHVALQIASGMKYLSSLN--FVHRDL 164

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 15/100 (15%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L H  +V L+D+   D  S   V EY D  DL  Y+     I     
Sbjct: 48  PCTAIREVSLLKDLKHANIVTLHDIVHTD-KSLTLVFEYLD-KDLKQYMDDCGNIMSMH- 104

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     + +  + Q++  L Y +  K  V+H DLKP
Sbjct: 105 ----------NVKIFLYQILRGLAYCHRRK--VLHRDLKP 132

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H   E  + K + HP +++L+   E D      ++EY  G +L  YL        R +  
Sbjct: 47  HVHNEKRVLKEVSHPFIIRLFWT-EHDQRFLYMLMEYVPGGELFSYL--------RNSGR 97

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            S    +++      ++V AL+YL+  +  +++ DLKP
Sbjct: 98  FS----NSTGLFYASEIVCALEYLHSKE--IVYRDLKP 129

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           RE  I + LDH  +VK   V E     S   ++EY     L  YL++H+       +   
Sbjct: 55  REIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR------DQINL 108

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
           +  L  S      Q+   + YL   +   IH DL
Sbjct: 109 KRLLLFS-----SQICKGMDYLGSQR--YIHRDL 135

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 13/96 (13%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + +E  +   + HP +V+  + FE + N +  V++YC+G DL   +   + +   E + L
Sbjct: 46  SRKEVAVLSNMKHPNIVQYQESFEENGNLY-IVMDYCEGGDLYKKINAQRGVLFPEDQIL 104

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                        +Q+  ALK++++ K  ++H D+K
Sbjct: 105 DW----------FVQICLALKHVHDRK--ILHRDIK 128

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 16/94 (17%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE N+ + LD+P +V++  + E  A S+  V+E  +   L+ +L+++K + E+      
Sbjct: 44  LREANVMQQLDNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQKNKHVTEK------ 95

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
                 +   +V QV   +KYL E     +H DL
Sbjct: 96  ------NITELVHQVSMGMKYLEETN--FVHRDL 121

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 30  HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
           HP + +L+  F+        V+EY +G DL F++++     E  AR  +           
Sbjct: 55  HPFLTQLHSCFQTKDR-LFFVMEYVNGGDLMFHIQRSGRFDEPRARFYA----------- 102

Query: 90  VMQVVSALKYLNEIKPPVIHYDLK 113
             ++V  L++L+E    +I+ DLK
Sbjct: 103 -AEIVLGLQFLHERG--IIYRDLK 123

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 15/105 (14%)

Query: 15  PRHALREYNIHKALDH-PRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTI 69
           P  ALRE ++ + L     +V+L DV  ++      S   V EY D  DL  ++  +   
Sbjct: 44  PPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNG-- 100

Query: 70  AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                R   +P  + + +S + Q++  + + +  K  V+H DLKP
Sbjct: 101 -----RGPGRPLPAKTIKSFMYQLLKGVAHCH--KHGVMHRDLKP 138

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 35.0 bits (81), Expect = 0.004
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 15/100 (15%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L H  +V L+D+      +   V EY D  DL  Y+           
Sbjct: 47  PFTAIREASLLKDLKHANIVTLHDIIHTK-KTLTLVFEYLD-TDLKQYMDDCGGGLSMH- 103

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     + R  + Q++  L Y ++ +  V+H DLKP
Sbjct: 104 ----------NVRLFLFQLLRGLAYCHQRR--VLHRDLKP 131

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 17/102 (16%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAERE 73
           P  A+RE ++ K L HP +V L DV  +  +    + E+     L   LK++  ++ + +
Sbjct: 43  PSTAIREISLLKELQHPNIVCLQDVL-MQESRLYLIFEF-----LSMDLKKYLDSLPKGQ 96

Query: 74  ARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  Y+     +S + Q++  + + +  +  V+H DLKP
Sbjct: 97  -------YMDAELVKSYLYQILQGILFCHSRR--VLHRDLKP 129

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	122
KOG0595|consensus	429		99.97
KOG0615|consensus	475		99.96
KOG0581|consensus	364		99.94
KOG0575|consensus	592		99.94
KOG0192|consensus	362		99.94
KOG1187|consensus	361		99.94
KOG0598|consensus	357		99.93
KOG1026|consensus	774		99.93
KOG0611|consensus	668		99.93
KOG0197|consensus	468		99.93
KOG0592|consensus	604		99.92
KOG0583|consensus	370		99.92
KOG0616|consensus	355		99.92
KOG0600|consensus	560		99.92
KOG0610|consensus	459		99.92
KOG0593|consensus	396		99.91
KOG0591|consensus	375		99.91
KOG0588|consensus	786		99.9
KOG0198|consensus	313		99.9
KOG0582|consensus	516		99.9
KOG0594|consensus	323		99.9
KOG0659|consensus	318		99.9
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.9
KOG0661|consensus	538		99.89
KOG0663|consensus	419		99.89
KOG0194|consensus	474		99.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.89
KOG0607|consensus	463		99.89
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.89
KOG0580|consensus	281		99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.89
KOG0586|consensus	596		99.88
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.88
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.88
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.88
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.88
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.88
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.88
KOG0605|consensus	550		99.88
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.88
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.88
KOG4250|consensus	732		99.88
KOG0599|consensus	411		99.88
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.88
KOG1989|consensus	738		99.88
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.88
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.88
KOG1094|consensus	807		99.88
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
KOG0585|consensus	576		99.88
KOG0589|consensus	426		99.88
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.87
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.87
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.87
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.87
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.87
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.87
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.87
KOG0196|consensus	996		99.87
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.87
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.87
KOG0032|consensus	382		99.87
KOG1095|consensus	1025		99.87
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.87
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.87
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.87
KOG0660|consensus	359		99.86
KOG0597|consensus	808		99.86
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.86
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.86
PTZ00267	478	NIMA-related protein kinase; Provisional	99.86
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.86
KOG0033|consensus	355		99.86
KOG0584|consensus	632		99.86
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.86
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.86
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.86
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.86
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.86
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.86
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.86
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.86
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.86
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.86
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.86
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.86
PHA02988	283	hypothetical protein; Provisional	99.85
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.85
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.85
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.85
KOG0578|consensus	550		99.85
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.85
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.85
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.85
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.85
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.85
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.85
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.85
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.85
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.85
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.85
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.85
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.85
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.85
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.85
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.85
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.85
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.85
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.85
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.85
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.85
KOG0666|consensus	438		99.85
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.85
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.85
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.85
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.85
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.84
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.84
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.84
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.84
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.84
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.84
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.84
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.84
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.84
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.84
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.84
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.84
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.84
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.84
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.84
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.84
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.84
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.84
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.84
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.84
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.84
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.84
KOG0604|consensus	400		99.84
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.84
KOG4717|consensus	864		99.84
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.84
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.84
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.84
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.84
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.84
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.84
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.84
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.83
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
KOG0658|consensus	364		99.83
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.83
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.83
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.83
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.83
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.83
KOG4721|consensus	904		99.83
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.83
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.83
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.83
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.83
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.83
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.83
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.83
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.83
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.83
KOG0694|consensus	694		99.83
PHA03212	391	serine/threonine kinase US3; Provisional	99.83
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.83
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.83
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.83
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.83
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.83
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.82
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.82
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.82
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.82
KOG1151|consensus	775		99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.82
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.82
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.82
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.82
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.82
KOG0667|consensus	586		99.82
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.82
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.82
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.82
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.82
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.82
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.82
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.82
KOG4257|consensus	974		99.82
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.82
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.82
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.82
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.82
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.82
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.82
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.82
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.81
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.81
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.81
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.81
KOG2345|consensus	302		99.81
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.81
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.81
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.81
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.81
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.81
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.81
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.81
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.81
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.81
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.81
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.81
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.81
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.81
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.81
KOG0193|consensus	678		99.81
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.81
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.81
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.8
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.8
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.8
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.8
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.8
PHA03207	392	serine/threonine kinase US3; Provisional	99.8
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.8
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.8
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.8
KOG0662|consensus	292		99.8
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.8
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.8
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.8
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.8
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.8
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.8
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.8
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.8
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.8
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.8
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.8
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.8
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.8
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.8
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.8
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.79
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.79
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.79
KOG4236|consensus	888		99.79
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.79
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.79
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.79
PHA03211	461	serine/threonine kinase US3; Provisional	99.79
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.79
KOG4278|consensus	1157		99.79
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.79
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.79
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.79
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.79
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.79
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.79
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.79
PLN00009	294	cyclin-dependent kinase A; Provisional	99.78
PTZ00283	496	serine/threonine protein kinase; Provisional	99.78
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.78
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.78
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.78
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.78
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.78
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.78
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.78
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.78
KOG0574|consensus	502		99.78
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.78
KOG0608|consensus	1034		99.78
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.78
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.78
KOG0577|consensus	948		99.78
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.78
PRK10345	210	hypothetical protein; Provisional	99.78
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.77
KOG0690|consensus	516		99.77
PHA03209	357	serine/threonine kinase US3; Provisional	99.77
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.77
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.77
PTZ00036	440	glycogen synthase kinase; Provisional	99.77
KOG0612|consensus	1317		99.77
KOG0579|consensus	1187		99.77
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.77
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.77
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.77
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.77
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.77
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.76
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.76
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.76
KOG0614|consensus	732		99.76
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.76
KOG4645|consensus	1509		99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.76
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.76
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.76
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.76
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.76
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.75
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.75
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.75
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.75
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.75
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.75
KOG0200|consensus	609		99.75
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.75
PTZ00284	467	protein kinase; Provisional	99.75
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.75
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.75
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.75
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.75
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.74
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.74
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.74
KOG0199|consensus	1039		99.74
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.74
KOG3653|consensus	534		99.74
KOG2052|consensus	513		99.74
KOG0201|consensus	467		99.74
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.74
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.74
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.74
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.74
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.74
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.74
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.74
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.73
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.73
PHA03210	501	serine/threonine kinase US3; Provisional	99.73
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.73
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.73
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.72
KOG1025|consensus	1177		99.72
PRK09188	365	serine/threonine protein kinase; Provisional	99.71
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.71
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.71
KOG4279|consensus	1226		99.71
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.71
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.71
KOG1290|consensus	590		99.7
KOG0986|consensus	591		99.7
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.7
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.7
KOG1035|consensus	1351		99.7
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.7
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.7
KOG1027|consensus	903		99.69
KOG0984|consensus	282		99.69
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.69
KOG0671|consensus	415		99.69
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.68
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.68
KOG0665|consensus	369		99.68
KOG0587|consensus	953		99.67
KOG0668|consensus	338		99.67
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.67
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.66
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.66
KOG0669|consensus	376		99.65
KOG0603|consensus	612		99.64
KOG0696|consensus	683		99.63
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.63
KOG1152|consensus	772		99.62
KOG1345|consensus	378		99.61
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.59
KOG0596|consensus	677		99.58
PRK14879	211	serine/threonine protein kinase; Provisional	99.57
KOG0983|consensus	391		99.57
KOG1006|consensus	361		99.57
KOG0695|consensus	593		99.56
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.53
KOG0664|consensus	449		99.53
KOG1167|consensus	418		99.53
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.53
KOG0670|consensus	752		99.52
PRK12274	218	serine/threonine protein kinase; Provisional	99.49
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.49
PHA02882	294	putative serine/threonine kinase; Provisional	99.48
KOG0576|consensus	829		99.48
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.44
KOG1024|consensus	563		99.41
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.4
smart00090	237	RIO RIO-like kinase.	99.39
PLN00181	793	protein SPA1-RELATED; Provisional	99.37
KOG1163|consensus	341		99.37
KOG1164|consensus	322		99.37
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.35
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.34
KOG1165|consensus	449		99.25
KOG4158|consensus	598		99.15
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.14
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.11
KOG0590|consensus	601		99.06
KOG1166|consensus	974		99.05
KOG0195|consensus	448		99.05
KOG3087|consensus	229		99.03
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.99
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.94
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.94
KOG1243|consensus	690		98.92
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.88
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.84
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.81
KOG1240|consensus	1431		98.79
KOG0603|consensus	612		98.77
KOG1266|consensus	458		98.76
KOG3741|consensus	655		98.76
KOG1023|consensus	484		98.66
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.56
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.55
KOG0590|consensus	601		98.45
KOG0601|consensus	524		98.3
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.28
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.19
PRK09902	216	hypothetical protein; Provisional	98.03
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.98
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.97
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.68
KOG0601|consensus	524		97.63
PLN02876	822	acyl-CoA dehydrogenase	97.61
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.45
KOG1033|consensus	516		97.36
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.18
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.06
KOG1235|consensus	538		97.03
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.63
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.38
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.16
KOG0606|consensus	1205		95.81
KOG0606|consensus	1205		95.7
KOG2270|consensus	520		93.84
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	93.17
KOG0576|consensus	829		92.89
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	92.87
PHA03111	444	Ser/Thr kinase; Provisional	92.21
PRK10593	297	hypothetical protein; Provisional	91.65
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	91.0
PF01636	239	APH: Phosphotransferase enzyme family This family	89.48
KOG2268|consensus	465		87.63
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	87.55
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	85.51
COG4248	637	Uncharacterized protein with protein kinase and he	85.1
PRK10593	297	hypothetical protein; Provisional	85.01
KOG1236|consensus	565		84.64
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	81.39
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	81.14
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	80.97
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	80.62

>KOG0595|consensus

Probab=99.97  E-value=5e-30  Score=167.14  Aligned_cols=106  Identities=36%  Similarity=0.587  Sum_probs=96.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+.+.. ..+..+-+..|+.+|+.++|||||.+++++. +.+.+|+|||||.||+|..++...+.+++..+     
T Consensus        38 VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~-----  111 (429)
T KOG0595|consen   38 VAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATA-----  111 (429)
T ss_pred             EEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHH-----
Confidence            6899888763 5667788899999999999999999999998 88899999999999999999998776666666     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             +.++.|++.|+.+||+++  |+||||||+||||+.
T Consensus       112 -------r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~  144 (429)
T KOG0595|consen  112 -------RHFMQQLASALQFLHENN--IIHRDLKPQNILLST  144 (429)
T ss_pred             -------HHHHHHHHHHHHHHHHCC--eeeccCCcceEEecc
Confidence                   999999999999999999  999999999999975

>KOG0615|consensus

Probab=99.96  E-value=5.1e-29  Score=162.86  Aligned_cols=106  Identities=30%  Similarity=0.445  Sum_probs=93.0

Q ss_pred             CeeeeccCCCCCc------chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLP------FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++++....+      ......+|+++|++++|||||+++++|+ ..++.|||+||++||+|.+++-.++.+.++..
T Consensus       200 vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~-~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~  278 (475)
T KOG0615|consen  200 VAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE-VPDSSYMVLEYVEGGELFDKVVANKYLREDLG  278 (475)
T ss_pred             EEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee-cCCceEEEEEEecCccHHHHHHhccccccchh
Confidence            6999999763211      1233469999999999999999999998 77888999999999999999998888777777


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                  ..+++|++.|+.|||+.|  |+||||||+|||+..
T Consensus       279 ------------K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~  311 (475)
T KOG0615|consen  279 ------------KLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSN  311 (475)
T ss_pred             ------------HHHHHHHHHHHHHHHHcC--cccccCCcceEEecc
Confidence                        899999999999999999  999999999999964

>KOG0581|consensus

Probab=99.94  E-value=6.3e-27  Score=151.14  Aligned_cols=107  Identities=29%  Similarity=0.451  Sum_probs=93.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|++..+.++...+++.+|+++++.++||+||.+||+|..+....+++||||++|+|..+++..+            .
T Consensus       107 ~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g------------~  174 (364)
T KOG0581|consen  107 YALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG------------R  174 (364)
T ss_pred             EEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC------------C
Confidence            5899997777777889999999999999999999999999833336999999999999999998643            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+-.++.+++.|+.|||+ .+  |+|||+||+|||+++
T Consensus       175 i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNs  214 (364)
T KOG0581|consen  175 IPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNS  214 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeecc
Confidence            5556668999999999999996 66  999999999999975

>KOG0575|consensus

Probab=99.94  E-value=1.4e-26  Score=157.00  Aligned_cols=107  Identities=36%  Similarity=0.572  Sum_probs=96.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+.  .++...++..+|+++.+.++|||||+++++|+ +.+++||+.|.|..++|..+++..+.+.+.++    
T Consensus        46 ~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-Ds~nVYivLELC~~~sL~el~Krrk~ltEpEa----  120 (592)
T KOG0575|consen   46 VAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE-DSNNVYIVLELCHRGSLMELLKRRKPLTEPEA----  120 (592)
T ss_pred             EEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee-cCCceEEEEEecCCccHHHHHHhcCCCCcHHH----
Confidence            699999986  35667899999999999999999999999999 88999999999999999999997655555444    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                              ..+++||+.|+.|||+.+  |+|||||..|+||+++
T Consensus       121 --------ry~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~  154 (592)
T KOG0575|consen  121 --------RYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNEN  154 (592)
T ss_pred             --------HHHHHHHHHHHHHHHhcC--ceecccchhheeecCc
Confidence                    999999999999999999  9999999999999864

>KOG0192|consensus

Probab=99.94  E-value=4e-26  Score=151.07  Aligned_cols=110  Identities=24%  Similarity=0.395  Sum_probs=92.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.... +....+++.+|+.+|.+++||||+.++|+|......+++||||+++|+|.+++...          ...
T Consensus        68 vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~----------~~~  137 (362)
T KOG0192|consen   68 VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK----------RKR  137 (362)
T ss_pred             EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc----------ccC
Confidence            5899988763 22236789999999999999999999999983333789999999999999999763          123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.+++.||.|||+.++ |+||||||+|+|++.
T Consensus       138 ~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~  178 (362)
T KOG0192|consen  138 KLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDL  178 (362)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcC
Confidence            55666679999999999999999875 899999999999975

>KOG1187|consensus

Probab=99.94  E-value=7.6e-26  Score=150.14  Aligned_cols=110  Identities=29%  Similarity=0.356  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+....... ...|.+|+.++.+++|||++.++|+|. +.+ ..++|+|||++|+|.+.+.....         . 
T Consensus       102 vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~-e~~~~~~LVYEym~nGsL~d~L~~~~~---------~-  169 (361)
T KOG1187|consen  102 VAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCL-EGGEHRLLVYEYMPNGSLEDHLHGKKG---------E-  169 (361)
T ss_pred             EEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEe-cCCceEEEEEEccCCCCHHHHhCCCCC---------C-
Confidence            6899888764332 455999999999999999999999998 555 58899999999999998875321         1 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~~  122 (122)
                      ++.|..+..++.+++.|+.|||.. .++|+|||+||+|||||++
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~  213 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED  213 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC
Confidence            668889999999999999999995 4589999999999999964

>KOG0598|consensus

Probab=99.93  E-value=7.7e-26  Score=145.99  Aligned_cols=106  Identities=31%  Similarity=0.434  Sum_probs=96.0

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++++.  ...+..+....|..+|..++||.||.++..|+ +...+|+|+||+.||.|...+...+.+.+..+    
T Consensus        53 YAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-t~~kLylVld~~~GGeLf~hL~~eg~F~E~~a----  127 (357)
T KOG0598|consen   53 YAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-TEEKLYLVLDYLNGGELFYHLQREGRFSEDRA----  127 (357)
T ss_pred             eehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-cCCeEEEEEeccCCccHHHHHHhcCCcchhHH----
Confidence            588998876  24456788899999999999999999999999 88999999999999999999998777777666    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                              ..|+.+|+.|+.|||+.+  |+|||+||+||||+.
T Consensus       128 --------rfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~  160 (357)
T KOG0598|consen  128 --------RFYLAEIVLALGYLHSKG--IIYRDLKPENILLDE  160 (357)
T ss_pred             --------HHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecC
Confidence                    899999999999999999  999999999999985

>KOG1026|consensus

Probab=99.93  E-value=1e-25  Score=157.38  Aligned_cols=118  Identities=25%  Similarity=0.388  Sum_probs=103.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh--cC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC--LS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~--~~   78 (122)
                      ||||.++...+.+..++|.+|+++++.++|||||+++|+|. .++.+|||+|||..|+|.+||..+.+........  .+
T Consensus       519 VAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~  597 (774)
T KOG1026|consen  519 VAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTP  597 (774)
T ss_pred             hhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCC
Confidence            79999998876668899999999999999999999999999 8899999999999999999999876533322111  14


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++...+.+.++.||+.||.||-+..  ++||||.++|+|+.+
T Consensus       598 ~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge  638 (774)
T KOG1026|consen  598 PPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGE  638 (774)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceecc
Confidence            45778899999999999999999998  999999999999975

>KOG0611|consensus

Probab=99.93  E-value=1e-25  Score=148.34  Aligned_cols=107  Identities=32%  Similarity=0.534  Sum_probs=96.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||.++++.  ++.+.-++.+|++++..++||||+++|.+|+ +.+.+.+||||..+|.|.+++...+.+++..+    
T Consensus        81 VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-NkdKIvivMEYaS~GeLYDYiSer~~LsErEa----  155 (668)
T KOG0611|consen   81 VAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-NKDKIVIVMEYASGGELYDYISERGSLSEREA----  155 (668)
T ss_pred             eehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-CCceEEEEEEecCCccHHHHHHHhccccHHHH----
Confidence            6899998873  4445667789999999999999999999999 88889999999999999999998877777766    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                              ..+++||+.++.|+|.++  ++|||||.+|||+|.+
T Consensus       156 --------RhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N  189 (668)
T KOG0611|consen  156 --------RHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQN  189 (668)
T ss_pred             --------HHHHHHHHHHHHHHhhcc--ceecccchhheeecCC
Confidence                    999999999999999999  9999999999999853

>KOG0197|consensus

Probab=99.93  E-value=4.1e-25  Score=147.83  Aligned_cols=107  Identities=26%  Similarity=0.303  Sum_probs=92.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++.+  .-..++|.+|+++|++++|++||+++++|. .++.++||||||+.|+|.++++....          ..
T Consensus       233 vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~-~~~piyIVtE~m~~GsLl~yLr~~~~----------~~  299 (468)
T KOG0197|consen  233 VAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCT-KQEPIYIVTEYMPKGSLLDYLRTREG----------GL  299 (468)
T ss_pred             ccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEe-cCCceEEEEEecccCcHHHHhhhcCC----------Cc
Confidence            688888876  334588999999999999999999999998 65689999999999999999997322          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +...+.+.++.|||+||+||++++  ++||||.++|||++++
T Consensus       300 l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~  339 (468)
T KOG0197|consen  300 LNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDED  339 (468)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccC
Confidence            444566999999999999999999  9999999999999864

>KOG0592|consensus

Probab=99.92  E-value=3e-25  Score=149.33  Aligned_cols=107  Identities=33%  Similarity=0.423  Sum_probs=94.4

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|||++.+.  .++.-..-.-+|-..|.++ .||+|++++..|+ +...+|+|+||+++|+|.++++.-+.+.+.++   
T Consensus       101 YAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ-D~~sLYFvLe~A~nGdll~~i~K~Gsfde~ca---  176 (604)
T KOG0592|consen  101 YAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ-DEESLYFVLEYAPNGDLLDLIKKYGSFDETCA---  176 (604)
T ss_pred             eeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-cccceEEEEEecCCCcHHHHHHHhCcchHHHH---
Confidence            588888876  2333345556788889999 8999999999999 88899999999999999999999888888888   


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                               +.|+.+|+.+++|||+.|  |+||||||+||||+++
T Consensus       177 ---------R~YAAeIldAleylH~~G--IIHRDlKPENILLd~d  210 (604)
T KOG0592|consen  177 ---------RFYAAEILDALEYLHSNG--IIHRDLKPENILLDKD  210 (604)
T ss_pred             ---------HHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCC
Confidence                     899999999999999999  9999999999999864

>KOG0583|consensus

Probab=99.92  E-value=1.3e-24  Score=144.59  Aligned_cols=106  Identities=30%  Similarity=0.506  Sum_probs=90.9

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|++.+..    .....+.+.+|+.+++.+. ||||++++.++. ....+++||||+.||+|.+++...+.+.+..+ 
T Consensus        45 vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~-t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~a-  122 (370)
T KOG0583|consen   45 VAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA-TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEA-  122 (370)
T ss_pred             EEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe-cCCeEEEEEEecCCccHHHHHHHcCCCChHHH-
Confidence            6899777641    1134556678999999998 999999999998 66669999999999999999998666666555 


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                 ..++.|++.|+.|+|+.+  ++||||||+|||++.
T Consensus       123 -----------r~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~  155 (370)
T KOG0583|consen  123 -----------RKYFRQLISAVAYCHSRG--IVHRDLKPENILLDG  155 (370)
T ss_pred             -----------HHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecC
Confidence                       899999999999999999  999999999999985

>KOG0616|consensus

Probab=99.92  E-value=4.3e-25  Score=139.68  Aligned_cols=107  Identities=34%  Similarity=0.521  Sum_probs=95.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++.+.  .+-+..++..+|.++|+.+.||.++.+++.+. +.+.++|+|||.+||.|.++++..+.+++..+    
T Consensus        72 YAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~a----  146 (355)
T KOG0616|consen   72 YAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHA----  146 (355)
T ss_pred             eehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-cCCeEEEEEeccCCccHHHHHHhcCCCCchhH----
Confidence            578888876  24456788999999999999999999999999 88999999999999999999998766666555    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                              +.++.|++.|++|||+.+  |++|||||+|||+|.+
T Consensus       147 --------rFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~  180 (355)
T KOG0616|consen  147 --------RFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQN  180 (355)
T ss_pred             --------HHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccC
Confidence                    999999999999999999  9999999999999863

>KOG0600|consensus

Probab=99.92  E-value=2.7e-24  Score=143.74  Aligned_cols=107  Identities=28%  Similarity=0.431  Sum_probs=92.8

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.-. ..++......|||.+|++++||||+.+.+..+.. ...+|||+|||+ .+|.-++...           .
T Consensus       145 vALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd-hDL~GLl~~p-----------~  212 (560)
T KOG0600|consen  145 VALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD-HDLSGLLSSP-----------G  212 (560)
T ss_pred             EEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc-chhhhhhcCC-----------C
Confidence            688888765 4677888899999999999999999999999844 478999999998 7888777642           2


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      -.+.+.++..++.|++.|+.|+|+.+  ++|||||.+||||+.
T Consensus       213 vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn  253 (560)
T KOG0600|consen  213 VKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDN  253 (560)
T ss_pred             cccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcC
Confidence            35667788999999999999999999  999999999999985

>KOG0610|consensus

Probab=99.92  E-value=1.9e-24  Score=141.64  Aligned_cols=109  Identities=29%  Similarity=0.452  Sum_probs=92.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++.+..  +.+...+...|.++|+.++||.++.+|..|+ +....|++||||+||+|..+++...          .
T Consensus       105 fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~~~~cl~meyCpGGdL~~LrqkQp----------~  173 (459)
T KOG0610|consen  105 FAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-TDKYSCLVMEYCPGGDLHSLRQKQP----------G  173 (459)
T ss_pred             EEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-ccceeEEEEecCCCccHHHHHhhCC----------C
Confidence            5899998873  2334566677889999999999999999999 7889999999999999999887642          2


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .-+++..++.|+.+++-|++|||..|  |+.|||||+|||+-++
T Consensus       174 ~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvred  215 (459)
T KOG0610|consen  174 KRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVRED  215 (459)
T ss_pred             CccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecC
Confidence            34555566999999999999999999  9999999999998653

>KOG0593|consensus

Probab=99.91  E-value=9.7e-25  Score=138.76  Aligned_cols=106  Identities=25%  Similarity=0.384  Sum_probs=87.4

Q ss_pred             CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+....+ +...+-++||+++|++++|+|+|.+..+|. ....+++|+|||+. ++.+-+....           .
T Consensus        30 VAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-rkrklhLVFE~~dh-TvL~eLe~~p-----------~   96 (396)
T KOG0593|consen   30 VAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-RKRKLHLVFEYCDH-TVLHELERYP-----------N   96 (396)
T ss_pred             EEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-hcceeEEEeeecch-HHHHHHHhcc-----------C
Confidence            68999987754 334566689999999999999999999998 78899999999984 5544444321           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..++..+..+++|++.|+.|+|+++  ++|||+||+|||++.
T Consensus        97 G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~  136 (396)
T KOG0593|consen   97 GVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQ  136 (396)
T ss_pred             CCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEec
Confidence            3444556899999999999999999  999999999999975

>KOG0591|consensus

Probab=99.91  E-value=6.1e-25  Score=138.55  Aligned_cols=113  Identities=24%  Similarity=0.391  Sum_probs=92.6

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceee-eeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYD-VFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~-~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||.|.++-+ .+.+.+++...|+.+|++++||||+++++ .+..+...++++||+|++|+|.+.++..+.        ..
T Consensus        47 ~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~--------qk  118 (375)
T KOG0591|consen   47 VALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKK--------QK  118 (375)
T ss_pred             hhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHh--------cc
Confidence            355555533 45667889999999999999999999999 555355558899999999999999986432        34


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCC--eeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPP--VIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~--i~h~dlk~~nill~~  121 (122)
                      ..++++.+|.++.|++.|+.++|++-++  ++||||||.||+++.
T Consensus       119 r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~  163 (375)
T KOG0591|consen  119 RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA  163 (375)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC
Confidence            5678889999999999999999995444  999999999999974

>KOG0588|consensus

Probab=99.90  E-value=1e-23  Score=144.84  Aligned_cols=106  Identities=33%  Similarity=0.540  Sum_probs=96.3

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|||++.+.  ..+.....+.+|+-+|+.+.|||++.+|++++ +...+|++.||+++|.|.+++-..+++++..+    
T Consensus        40 aaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-~~~~lylvlEyv~gGELFdylv~kG~l~e~ea----  114 (786)
T KOG0588|consen   40 AAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-NKQHLYLVLEYVPGGELFDYLVRKGPLPEREA----  114 (786)
T ss_pred             eEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-cCceEEEEEEecCCchhHHHHHhhCCCCCHHH----
Confidence            489999887  34456788899999999999999999999999 88899999999999999999998877776666    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                              ..++.||+.|+.|+|..+  |.||||||+|+||+.
T Consensus       115 --------a~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~  147 (786)
T KOG0588|consen  115 --------AHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDV  147 (786)
T ss_pred             --------HHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhc
Confidence                    999999999999999999  999999999999985

>KOG0198|consensus

Probab=99.90  E-value=2.5e-23  Score=134.88  Aligned_cols=107  Identities=24%  Similarity=0.357  Sum_probs=88.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      .|||......... .+.+.+|+.+|.+++|||||+++|......+ .++++|||+++|+|.+++...+.           
T Consensus        45 ~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-----------  112 (313)
T KOG0198|consen   45 MAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-----------  112 (313)
T ss_pred             eeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC-----------
Confidence            3666666542222 6778999999999999999999998542333 68899999999999999987542           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++..+..+..|+++|+.|||+++  ++|+||||+|||++.
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~  152 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDP  152 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeC
Confidence            3556666999999999999999999  999999999999975

>KOG0582|consensus

Probab=99.90  E-value=3.5e-23  Score=136.92  Aligned_cols=109  Identities=22%  Similarity=0.243  Sum_probs=94.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.-..-......+.+|+..++.++||||+.++.+|. ....+|+||.||++|++.++++..-+          ..
T Consensus        54 VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-v~~~LWvVmpfMa~GS~ldIik~~~~----------~G  122 (516)
T KOG0582|consen   54 VAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-VDSELWVVMPFMAGGSLLDIIKTYYP----------DG  122 (516)
T ss_pred             EEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-ecceeEEeehhhcCCcHHHHHHHHcc----------cc
Confidence            68999986532334688899999999999999999999998 77889999999999999999987433          34


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +.+..+..+.++++.|+.|||++|  .+|||+|+.|||++.+
T Consensus       123 l~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~d  162 (516)
T KOG0582|consen  123 LEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSD  162 (516)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCC
Confidence            566677999999999999999999  9999999999999864

>KOG0594|consensus

Probab=99.90  E-value=6.7e-23  Score=131.90  Aligned_cols=111  Identities=27%  Similarity=0.424  Sum_probs=93.3

Q ss_pred             CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCC-ccceeeeeeeCCC-----eEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPR-VVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||+|.+.-... ++......+|+.+++.++|+| |+.+++++.+...     .+++++||+. .+|..+++......   
T Consensus        39 VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~---  114 (323)
T KOG0594|consen   39 VALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKP---  114 (323)
T ss_pred             EEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccc---
Confidence            68999887743 667888999999999999999 9999999974442     8899999998 89999998754311   


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                           ..++...++.++.|++.|+.|||+.+  |+||||||+||+++++
T Consensus       115 -----~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~  156 (323)
T KOG0594|consen  115 -----QGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSS  156 (323)
T ss_pred             -----cCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCC
Confidence                 23444667999999999999999999  9999999999999863

>KOG0659|consensus

Probab=99.90  E-value=3.1e-23  Score=129.64  Aligned_cols=107  Identities=25%  Similarity=0.423  Sum_probs=93.0

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.++.+ .+++......||+.+|+.++|+||+.+.++|. ..+.+.+|+||++ .+|...++...           .
T Consensus        30 VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~-~~~~l~lVfEfm~-tdLe~vIkd~~-----------i   96 (318)
T KOG0659|consen   30 VAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP-HKSNLSLVFEFMP-TDLEVVIKDKN-----------I   96 (318)
T ss_pred             EEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc-CCCceEEEEEecc-ccHHHHhcccc-----------c
Confidence            689999876 35567788999999999999999999999998 6778889999998 89999988642           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+.+..+..|+.+++.|+.|+|++.  |+|||+||.|+|++++
T Consensus        97 ~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~  137 (318)
T KOG0659|consen   97 ILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSD  137 (318)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCC
Confidence            4455566999999999999999999  9999999999999853

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.90  E-value=7.6e-23  Score=134.92  Aligned_cols=119  Identities=18%  Similarity=0.290  Sum_probs=92.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH--------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE--------   71 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~--------   71 (122)
                      ||+|.++........+.+.+|+.++..+ +||||+.+++++......++++|||+++|+|.+++........        
T Consensus        40 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  119 (338)
T cd05102          40 VAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPK  119 (338)
T ss_pred             hheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchh
Confidence            6888887654444456789999999999 8999999999987455678899999999999999875321100        


Q ss_pred             ------------------------------------------HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeee
Q psy4991          72 ------------------------------------------REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIH  109 (122)
Q Consensus        72 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h  109 (122)
                                                                ........++.+..+..++.|++.|+.|||+.+  ++|
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH  197 (338)
T cd05102         120 QRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIH  197 (338)
T ss_pred             hhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEC
Confidence                                                      000001234667788899999999999999999  999


Q ss_pred             eCCCCCCccccc
Q psy4991         110 YDLKPGKPLFLF  121 (122)
Q Consensus       110 ~dlk~~nill~~  121 (122)
                      |||||+||+++.
T Consensus       198 rDiKp~Nil~~~  209 (338)
T cd05102         198 RDLAARNILLSE  209 (338)
T ss_pred             CCCccceEEEcC
Confidence            999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0661|consensus

Probab=99.89  E-value=5.4e-24  Score=141.52  Aligned_cols=105  Identities=24%  Similarity=0.409  Sum_probs=89.4

Q ss_pred             CeeeeccCCCCCcchHHH-HHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNLPFPRHA-LREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~-~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||.+++.... +.+.. +||+.-|++++ ||||+.+.+++.+....+++|||||. ..|.++++.++           
T Consensus        38 VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~-----------  104 (538)
T KOG0661|consen   38 VAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRN-----------  104 (538)
T ss_pred             eeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcC-----------
Confidence            688988877322 33333 78999999997 99999999999844448999999998 89999998742           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ..+++..+..|++||++|+.|+|..|  +.|||+||+|||+.
T Consensus       105 r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~  144 (538)
T KOG0661|consen  105 RLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILIS  144 (538)
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEec
Confidence            45677778999999999999999999  99999999999987

>KOG0663|consensus

Probab=99.89  E-value=5.6e-23  Score=132.12  Aligned_cols=108  Identities=30%  Similarity=0.496  Sum_probs=93.3

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.++.. .+.+..-..+||+.+|.+++||||+.+..+.. .+.+.+|||||||+ .+|..++..-+           
T Consensus       104 VALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~-----------  171 (419)
T KOG0663|consen  104 VALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMK-----------  171 (419)
T ss_pred             EEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhcc-----------
Confidence            689999876 45668888899999999999999999999986 23467999999998 89999988632           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +++...++..++.|++.|+.|||...  |+||||||+|+|++++
T Consensus       172 q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~  213 (419)
T KOG0663|consen  172 QPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHK  213 (419)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccC
Confidence            45666677999999999999999999  9999999999999753

>KOG0194|consensus

Probab=99.89  E-value=3.6e-23  Score=139.81  Aligned_cols=107  Identities=25%  Similarity=0.415  Sum_probs=92.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||..+..  ........+++|++++++++|+||+.+||++. ....++++||+|.||+|.++|+..+.          
T Consensus       189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~-~~~Pl~ivmEl~~gGsL~~~L~k~~~----------  257 (474)
T KOG0194|consen  189 VAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV-LEEPLMLVMELCNGGSLDDYLKKNKK----------  257 (474)
T ss_pred             eEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCccEEEEEecCCCcHHHHHHhCCC----------
Confidence            688888852  34456788999999999999999999999998 77889999999999999999998653          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .++..+...++.+.+.||.|||+++  ++||||..+|+|++.
T Consensus       258 -~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~  297 (474)
T KOG0194|consen  258 -SLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSK  297 (474)
T ss_pred             -CCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecC
Confidence             2333444899999999999999999  999999999999975

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.89  E-value=1.9e-22  Score=129.20  Aligned_cols=107  Identities=24%  Similarity=0.324  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++...+......+.+|+..+++++||||+++++.+. ..+..+++|||+++|+|.+++....           ..
T Consensus        36 vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  103 (266)
T cd05064          36 VAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHE-----------GQ  103 (266)
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCC-----------CC
Confidence            57788776644444567889999999999999999999998 6778999999999999999887532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       104 l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~  142 (266)
T cd05064         104 LVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNS  142 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcC
Confidence            456667999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0607|consensus

Probab=99.89  E-value=2.8e-23  Score=133.28  Aligned_cols=105  Identities=28%  Similarity=0.391  Sum_probs=93.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|||++.+.... .+.+..+|++++.++ .|+||++++.+|+ +...+|+|||.|.||+|.+.+.++..+.+..+     
T Consensus       106 YAVKiidKq~gH-sR~RvfREVe~f~~Cqgh~nilqLiefFE-dd~~FYLVfEKm~GGplLshI~~~~~F~E~EA-----  178 (463)
T KOG0607|consen  106 YAVKIIDKQPGH-SRSRVFREVETFYQCQGHKNILQLIEFFE-DDTRFYLVFEKMRGGPLLSHIQKRKHFNEREA-----  178 (463)
T ss_pred             hhhhhhhcCCch-HHHHHHHHHHHHHHhcCCccHHHHHHHhc-ccceEEEEEecccCchHHHHHHHhhhccHHHH-----
Confidence            589998877332 567889999999999 6999999999999 77889999999999999999988888777777     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ..+...|+.|+.|||.+|  |.|||+||+|||..+
T Consensus       179 -------s~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~  211 (463)
T KOG0607|consen  179 -------SRVVKDIASALDFLHTKG--IAHRDLKPENILCES  211 (463)
T ss_pred             -------HHHHHHHHHHHHHHhhcC--cccccCCccceeecC
Confidence                   889999999999999999  999999999999754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.89  E-value=1.2e-22  Score=133.51  Aligned_cols=106  Identities=27%  Similarity=0.387  Sum_probs=88.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .......+.+|+.+++.++||||+.+++.+. ..+..+++|||+.+++|...+...+.+         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~---------   92 (323)
T cd05571          23 YAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVF---------   92 (323)
T ss_pred             EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcCCC---------
Confidence            5788887542  2334466788999999999999999999998 778899999999999998888764433         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~  130 (323)
T cd05571          93 ---SEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDK  130 (323)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECC
Confidence               44455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0580|consensus

Probab=99.89  E-value=6.3e-24  Score=131.00  Aligned_cols=108  Identities=27%  Similarity=0.419  Sum_probs=91.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+..  ..+..+.+.+|+++...++||||+++|++|- +....|+++||..+|++...+...+.          
T Consensus        50 valKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-d~~riyLilEya~~gel~k~L~~~~~----------  118 (281)
T KOG0580|consen   50 VALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-DSKRIYLILEYAPRGELYKDLQEGRM----------  118 (281)
T ss_pred             EEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee-ccceeEEEEEecCCchHHHHHHhccc----------
Confidence            6899998762  3345677899999999999999999999998 88899999999999999999984322          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+.....++.|++.|+.|+|.++  ++|||+||+|+|++.
T Consensus       119 ~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~  159 (281)
T KOG0580|consen  119 KRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGS  159 (281)
T ss_pred             ccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCC
Confidence            22333344899999999999999999  999999999999975

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=9.6e-23  Score=136.32  Aligned_cols=106  Identities=26%  Similarity=0.325  Sum_probs=88.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++||||+++++++. +....+++|||+++|+|.+++...+.+         
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~---------   98 (377)
T cd05629          29 YAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-DAQYLYLIMEFLPGGDLMTMLIKYDTF---------   98 (377)
T ss_pred             EEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCeeEEEEeCCCCCcHHHHHHhcCCC---------
Confidence            5788776531  2234466788999999999999999999998 778899999999999999988764433         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        99 ---~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~  136 (377)
T cd05629          99 ---SEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDR  136 (377)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECC
Confidence               34455889999999999999999  999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.89  E-value=2.2e-22  Score=131.02  Aligned_cols=118  Identities=25%  Similarity=0.398  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA------   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~------   74 (122)
                      ||+|.+...........+.+|+.++.+++|+||+++++++. +.+..++++||+.+|+|.+++...........      
T Consensus        49 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  127 (304)
T cd05096          49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVP  127 (304)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccc
Confidence            47888776543334567889999999999999999999998 66778999999999999999875322111100      


Q ss_pred             -hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 -RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 -~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ......+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       128 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--ivH~dlkp~Nill~~  173 (304)
T cd05096         128 PAHCLPAISYSSLLHVALQIASGMKYLSSLN--FVHRDLATRNCLVGE  173 (304)
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHCC--ccccCcchhheEEcC
Confidence             111234567788999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0586|consensus

Probab=99.88  E-value=1.4e-22  Score=137.87  Aligned_cols=106  Identities=34%  Similarity=0.517  Sum_probs=96.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.+.. +....+++.+|++++..++||||++++.+.. ....+|+||||+.+|.+.+++..++...+..+     
T Consensus        84 VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-t~~~lylV~eya~~ge~~~yl~~~gr~~e~~a-----  157 (596)
T KOG0586|consen   84 VAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-TEATLYLVMEYASGGELFDYLVKHGRMKEKEA-----  157 (596)
T ss_pred             EEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-ecceeEEEEEeccCchhHHHHHhcccchhhhh-----
Confidence            7999998873 4556688999999999999999999999998 78889999999999999999999888777666     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ..++.|++.+++|+|+++  |+|||||++|+||+.
T Consensus       158 -------r~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~  190 (596)
T KOG0586|consen  158 -------RAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDE  190 (596)
T ss_pred             -------hhhhHHHHHHHHHHhhcc--eeccccchhhccccc
Confidence                   889999999999999999  999999999999974

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.88  E-value=1.5e-22  Score=133.98  Aligned_cols=106  Identities=25%  Similarity=0.395  Sum_probs=88.9

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+...  ......+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+|+|.+++.....+         
T Consensus        59 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~~---------  128 (340)
T PTZ00426         59 VAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-DESYLYLVLEFVIGGEFFTFLRRNKRF---------  128 (340)
T ss_pred             EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCC---------
Confidence            477777543  12334567889999999999999999999998 778899999999999999998765443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       129 ---~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~  166 (340)
T PTZ00426        129 ---PNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDK  166 (340)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECC
Confidence               34455899999999999999999  999999999999974

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.88  E-value=1.6e-22  Score=133.17  Aligned_cols=106  Identities=26%  Similarity=0.337  Sum_probs=89.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+.+|+.+++.++||||+++++.+. +.+..+++|||+.+|+|.+.+...+.+         
T Consensus        46 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~---------  115 (329)
T PTZ00263         46 YAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-DENRVYFLLEFVVGGELFTHLRKAGRF---------  115 (329)
T ss_pred             EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-cCCEEEEEEcCCCCChHHHHHHHcCCC---------
Confidence            5788887541  2234567889999999999999999999998 778899999999999999988765443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ++..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       116 ---~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~  153 (329)
T PTZ00263        116 ---PNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDN  153 (329)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECC
Confidence               34444889999999999999999  999999999999975

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.88  E-value=1.6e-22  Score=135.50  Aligned_cols=106  Identities=26%  Similarity=0.348  Sum_probs=89.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+.+++.+. +.+..+++|||+++|+|.+++...+.+         
T Consensus        29 ~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~---------   98 (381)
T cd05626          29 YAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMEVF---------   98 (381)
T ss_pred             EEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHHhcCCC---------
Confidence            5888887542  2334567889999999999999999999998 778899999999999999998764433         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ++..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        99 ---~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~  136 (381)
T cd05626          99 ---PEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDL  136 (381)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECC
Confidence               34445889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.88  E-value=1.7e-22  Score=132.71  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=88.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .......+.+|+.+++.++||||+.+++++. ..+..+++|||+.+|+|...+...+.          
T Consensus        23 vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~----------   91 (323)
T cd05595          23 YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV----------   91 (323)
T ss_pred             EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCEEEEEEeCCCCCcHHHHHHHcCC----------
Confidence            5788887542  2234456778999999999999999999998 67789999999999999888765433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        92 --~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  130 (323)
T cd05595          92 --FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDK  130 (323)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcC
Confidence              344555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.88  E-value=1.4e-22  Score=134.94  Aligned_cols=106  Identities=23%  Similarity=0.311  Sum_probs=88.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+..  .....+.+.+|+.++..++|++|+.+++.+. +...++++|||+++|+|.+++...+.+         
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l---------   98 (363)
T cd05628          29 YAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-DKLNLYLIMEFLPGGDMMTLLMKKDTL---------   98 (363)
T ss_pred             EEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCC---------
Confidence            5888887541  2234466788999999999999999999998 778899999999999999998765443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        99 ---~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~  136 (363)
T cd05628          99 ---TEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDS  136 (363)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECC
Confidence               44455899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.2e-22  Score=135.11  Aligned_cols=106  Identities=27%  Similarity=0.394  Sum_probs=89.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++....  .......+.+|+.+++.++|+||+.+++.+. +....+++|||+.+|+|.+++...+.          
T Consensus        29 vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~----------   97 (364)
T cd05599          29 YAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-DENYLYLIMEYLPGGDMMTLLMKKDT----------   97 (364)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCeEEEEECCCCCcHHHHHHHHcCC----------
Confidence            5888887541  2234456778999999999999999999998 77889999999999999999876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        98 --l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~  136 (364)
T cd05599          98 --FTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDA  136 (364)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence              344555899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0605|consensus

Probab=99.88  E-value=1.4e-22  Score=136.17  Aligned_cols=107  Identities=29%  Similarity=0.403  Sum_probs=95.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++++..  .....+....|-.+|...+++.||++|.+|+ +...+||+|||++||++..+|...+.+.+..+    
T Consensus       169 yAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ-D~~~LYLiMEylPGGD~mTLL~~~~~L~e~~a----  243 (550)
T KOG0605|consen  169 YAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ-DKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWA----  243 (550)
T ss_pred             EeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec-CCCeeEEEEEecCCccHHHHHHhcCcCchHHH----
Confidence            5899999873  4456788888999999999999999999999 89999999999999999999988766666555    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                              ..|+.+.+.|+.-+|+.|  ++||||||+|+|||.+
T Consensus       244 --------rfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~  277 (550)
T KOG0605|consen  244 --------RFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAK  277 (550)
T ss_pred             --------HHHHHHHHHHHHHHHHcC--cccccCChhheeecCC
Confidence                    999999999999999999  9999999999999853

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.88  E-value=1.9e-22  Score=134.81  Aligned_cols=106  Identities=25%  Similarity=0.323  Sum_probs=88.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+.+++.+. +.+.++++|||+++|+|.+++...+.          
T Consensus        29 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~----------   97 (376)
T cd05598          29 YAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRLGI----------   97 (376)
T ss_pred             EEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence            5788876531  2224566789999999999999999999998 77889999999999999999876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        98 --~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~  136 (376)
T cd05598          98 --FEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDR  136 (376)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECC
Confidence              334455889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.88  E-value=2.6e-22  Score=132.18  Aligned_cols=106  Identities=27%  Similarity=0.403  Sum_probs=89.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .......+.+|+.+++.++||||+.+++.+. ..+..++||||+.+|+|...+...+.          
T Consensus        23 ~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~----------   91 (328)
T cd05593          23 YAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-TKDRLCFVMEYVNGGELFFHLSRERV----------   91 (328)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-cCCEEEEEEeCCCCCCHHHHHHhcCC----------
Confidence            5888887542  2334567788999999999999999999998 77889999999999999888765433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        92 --l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~  130 (328)
T cd05593          92 --FSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDK  130 (328)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECC
Confidence              344555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4250|consensus

Probab=99.88  E-value=1.1e-22  Score=140.36  Aligned_cols=109  Identities=30%  Similarity=0.450  Sum_probs=93.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||.+++......++...+|++++++++|+|||.++++-.+.     .+...++||||+||+|...+....+       
T Consensus        41 vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN-------  113 (732)
T KOG4250|consen   41 VAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPEN-------  113 (732)
T ss_pred             hhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCccc-------
Confidence            6899999876667789999999999999999999999987522     2356789999999999999986432       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                        ...+++..++.++..++.|+.|||+++  |+||||||.||++-
T Consensus       114 --~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~  154 (732)
T KOG4250|consen  114 --AYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQ  154 (732)
T ss_pred             --ccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEe
Confidence              356777788999999999999999999  99999999999974

>KOG0599|consensus

Probab=99.88  E-value=6.4e-23  Score=129.37  Aligned_cols=107  Identities=25%  Similarity=0.417  Sum_probs=91.4

Q ss_pred             CeeeeccCCC----CCc---chHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL----NLP---FPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~----~~~---~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      +|+|++.-..    ++.   ..++..+|+.+|+++ .||+|+.+.+.|+ +...+++|+|.|+.|.|.+++.+...+++.
T Consensus        45 ~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye-s~sF~FlVFdl~prGELFDyLts~VtlSEK  123 (411)
T KOG0599|consen   45 FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE-SDAFVFLVFDLMPRGELFDYLTSKVTLSEK  123 (411)
T ss_pred             eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc-CcchhhhhhhhcccchHHHHhhhheeecHH
Confidence            4677776432    111   346677899999998 8999999999998 778889999999999999999987777776


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      ..            ..+++|+..|+.|||..+  |+||||||+|||++++
T Consensus       124 ~t------------R~iMrqlfegVeylHa~~--IVHRDLKpENILlddn  159 (411)
T KOG0599|consen  124 ET------------RRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDN  159 (411)
T ss_pred             HH------------HHHHHHHHHHHHHHHHhh--hhhcccChhheeeccc
Confidence            66            899999999999999999  9999999999999864

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.1e-22  Score=131.66  Aligned_cols=106  Identities=24%  Similarity=0.324  Sum_probs=88.8

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++..  ........+.+|+.++..++||||+.+++.+. ..+..++++||+.+|+|..++...+.+         
T Consensus        21 ~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~---------   90 (312)
T cd05585          21 YALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-SPEKLYLVLAFINGGELFHHLQREGRF---------   90 (312)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-cCCeEEEEEcCCCCCcHHHHHHhcCCC---------
Confidence            578888653  12334567788999999999999999999998 778899999999999999988764443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        91 ---~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~  128 (312)
T cd05585          91 ---DLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDY  128 (312)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECC
Confidence               34445889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG1989|consensus

Probab=99.88  E-value=1.8e-22  Score=141.41  Aligned_cols=110  Identities=25%  Similarity=0.325  Sum_probs=91.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeee-ee---eC--CCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDV-FE---ID--ANSFCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~-~~---~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      +|+|.+-.. ++...+...+|+++|+.++ |+|||.+++. ..   .+  .-.++++||||.||.|-+++.....     
T Consensus        65 ~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq-----  138 (738)
T KOG1989|consen   65 YALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ-----  138 (738)
T ss_pred             eeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh-----
Confidence            578887766 5556788899999999995 9999999994 32   11  2368899999999999999986422     


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           ..+.+.+++.|++++|+|+.+||...+||+|||||.|||||+.
T Consensus       139 -----~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~  181 (738)
T KOG1989|consen  139 -----TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA  181 (738)
T ss_pred             -----ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence                 3467777899999999999999999999999999999999975

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.88  E-value=2.2e-22  Score=134.74  Aligned_cols=106  Identities=25%  Similarity=0.317  Sum_probs=88.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++....  .....+.+.+|+.+++.++|+||+.+++.+. +.+..++||||+++|+|.+++...+.          
T Consensus        29 ~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~----------   97 (382)
T cd05625          29 YAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGI----------   97 (382)
T ss_pred             EEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence            5788876541  2234567788999999999999999999998 77889999999999999998875433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        98 --~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~  136 (382)
T cd05625          98 --FPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDR  136 (382)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence              344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.88  E-value=3.1e-22  Score=131.18  Aligned_cols=106  Identities=23%  Similarity=0.302  Sum_probs=87.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|++.... .......+.+|++++++++|+||+++++.+. +.+..++++||+.+|+|.+++.....           
T Consensus        27 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------   94 (318)
T cd05582          27 YAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVM-----------   94 (318)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC-----------
Confidence            4778776542 2223456778999999999999999999998 67889999999999999988865433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        95 -l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  133 (318)
T cd05582          95 -FTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDE  133 (318)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECC
Confidence             345555999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG1094|consensus

Probab=99.88  E-value=5.3e-23  Score=140.09  Aligned_cols=108  Identities=27%  Similarity=0.440  Sum_probs=93.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++.......+.+|.+|+.+|.+++||||+.+.|+|. ..+.+|+++|||++|+|.+|+..+........      
T Consensus       565 VAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~-~DePicmI~EYmEnGDLnqFl~aheapt~~t~------  637 (807)
T KOG1094|consen  565 VAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV-QDDPLCMITEYMENGDLNQFLSAHELPTAETA------  637 (807)
T ss_pred             EEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-cCCchHHHHHHHhcCcHHHHHHhccCcccccc------
Confidence            69999998865556789999999999999999999999999 77889999999999999999988644221111      


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ...+++.||+.||+||.+.+  ++|||+.+.|+|++.
T Consensus       638 ----~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~  672 (807)
T KOG1094|consen  638 ----PGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDG  672 (807)
T ss_pred             ----hhHHHHHHHHHHHHHHHhhc--hhhccccccceeecC
Confidence                22679999999999999999  999999999999974

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.88  E-value=7.8e-22  Score=129.67  Aligned_cols=106  Identities=27%  Similarity=0.402  Sum_probs=87.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .......+.+|+.+++.++|+||+.+++.+. ..+..++||||+.+|+|...+.....          
T Consensus        23 ~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~----------   91 (325)
T cd05594          23 YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERV----------   91 (325)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence            5788887542  2234466778999999999999999999998 77889999999999999888765433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+ .+  ++||||||+||+++.
T Consensus        92 --l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~  131 (325)
T cd05594          92 --FSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDK  131 (325)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECC
Confidence              4445558999999999999997 68  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=5.6e-22  Score=132.65  Aligned_cols=118  Identities=20%  Similarity=0.256  Sum_probs=93.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||+|.++........+.+.+|+.+++.+ +|+||+++++++. .....+++|||+.+|+|.+++.......         
T Consensus        71 vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  149 (374)
T cd05106          71 VAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPE  149 (374)
T ss_pred             eEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec-CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccc
Confidence            5788887654344456788999999999 8999999999998 6778899999999999999986532100         


Q ss_pred             -------------------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHHHHHHH
Q psy4991          71 -------------------------------------------------EREARCLSQPYLSTSARSIVMQVVSALKYLN  101 (122)
Q Consensus        71 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  101 (122)
                                                                       .........++.+..++.++.|++.|+.|||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH  229 (374)
T cd05106         150 ISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA  229 (374)
T ss_pred             cccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence                                                             0000011234667788999999999999999


Q ss_pred             cCCCCeeeeCCCCCCccccc
Q psy4991         102 EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       102 ~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+  ++||||||+||+++.
T Consensus       230 ~~g--iiHrDLkp~Nil~~~  247 (374)
T cd05106         230 SKN--CIHRDVAARNVLLTD  247 (374)
T ss_pred             HCC--EEeccCchheEEEeC
Confidence            999  999999999999974

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0585|consensus

Probab=99.88  E-value=1.5e-22  Score=134.93  Aligned_cols=108  Identities=31%  Similarity=0.468  Sum_probs=85.3

Q ss_pred             CeeeeccCCC--------CCc-----chHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhc
Q psy4991           1 MCAKLLTTNL--------NLP-----FPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQH   66 (122)
Q Consensus         1 vavK~~~~~~--------~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~   66 (122)
                      ||||++.+..        .+.     ..++..+|+.+|+++.|+|||+++.+.. ...+.+|||+|||..|.+...-.. 
T Consensus       125 ~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-  203 (576)
T KOG0585|consen  125 YAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-  203 (576)
T ss_pred             EEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCC-
Confidence            6899998641        011     2357889999999999999999999996 233579999999998777432211 


Q ss_pred             cchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          67 KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                                 ...+.+.+.+.++++++.|++|||.++  |+||||||+|+|++++
T Consensus       204 -----------~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  204 -----------KPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSD  246 (576)
T ss_pred             -----------cccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCC
Confidence                       122566677999999999999999999  9999999999999863

>KOG0589|consensus

Probab=99.88  E-value=4e-22  Score=132.89  Aligned_cols=110  Identities=31%  Similarity=0.504  Sum_probs=93.2

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +++|.+.-. .+...++....|+.++++++||||+.+.+.|..++..++|+|+||+||++.+.++..+.          .
T Consensus        32 ~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~----------~  101 (426)
T KOG0589|consen   32 YVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKG----------V  101 (426)
T ss_pred             EEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhh----------c
Confidence            466776644 34445678889999999999999999999998566669999999999999999987542          3


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+++..++.|+.|++.|+.|||+++  |+|||||++||+++++
T Consensus       102 ~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~  142 (426)
T KOG0589|consen  102 LFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKD  142 (426)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhcccc
Confidence            4566777999999999999999988  9999999999999863

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2e-22  Score=130.62  Aligned_cols=106  Identities=24%  Similarity=0.369  Sum_probs=88.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .....+.+.+|+.+++.++||||+++++.+. +....+++|||+.+|+|.+++...+.+         
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~---------   98 (291)
T cd05612          29 YALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-DQRFLYMLMEYVPGGELFSYLRNSGRF---------   98 (291)
T ss_pred             EEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-cCCeEEEEEeCCCCCCHHHHHHHcCCC---------
Confidence            5788876431  2234566789999999999999999999988 778899999999999999998765443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+.....++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        99 ---~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~  136 (291)
T cd05612          99 ---SNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDK  136 (291)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence               34445889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=9.5e-22  Score=129.30  Aligned_cols=108  Identities=16%  Similarity=0.222  Sum_probs=89.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .....+.+.+|+.+++.++||||+++++.+. ..+..++++||+++|+|.+++..+..          .
T Consensus        28 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~   96 (327)
T cd08227          28 VTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFM----------D   96 (327)
T ss_pred             EEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-ECCEEEEEEeccCCCcHHHHHHhhcc----------C
Confidence            5788887553 2234456778999999999999999999998 66788999999999999999865321          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~  136 (327)
T cd08227          97 GMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISV  136 (327)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEec
Confidence            3455666899999999999999999  999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.87  E-value=1e-21  Score=131.39  Aligned_cols=118  Identities=19%  Similarity=0.239  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||||+++........+.+.+|+.+++.+ +||||+++++++. .....+++|||+++|+|.+++.......         
T Consensus        68 vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  146 (375)
T cd05104          68 VAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT-VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHA  146 (375)
T ss_pred             EEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec-cCCcceeeehhccCCcHHHHHHhcccccccccccchh
Confidence            5889887654444557788999999999 8999999999998 6778899999999999999997532100         


Q ss_pred             ------------------------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          71 ------------------------------------------------------EREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        71 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                                                                            ..........+.+..++.++.|++.|
T Consensus       147 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~  226 (375)
T cd05104         147 EAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKG  226 (375)
T ss_pred             hhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                                                                  00000011245677889999999999


Q ss_pred             HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          97 LKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        97 l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|||+.+  ++|+||||+||+++.
T Consensus       227 l~~lH~~~--ivH~Dlkp~Nill~~  249 (375)
T cd05104         227 MSFLASKN--CIHRDLAARNILLTH  249 (375)
T ss_pred             HHHHHHCC--eeccCCchhhEEEEC
Confidence            99999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=7.6e-22  Score=126.99  Aligned_cols=106  Identities=17%  Similarity=0.193  Sum_probs=86.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++|+||+++++++. +....++||||+++|+|..++....           ..
T Consensus        47 v~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~-----------~~  113 (274)
T cd05076          47 VVLKVLDPSH-RDIALAFFETASLMSQVSHIHLAFVHGVCV-RGSENIMVEEFVEHGPLDVCLRKEK-----------GR  113 (274)
T ss_pred             EEEEecChHH-HHHHHHHHHHHHHHhcCCCCCeeeEEEEEE-eCCceEEEEecCCCCcHHHHHHhcC-----------CC
Confidence            4677766442 223467788999999999999999999998 6677889999999999988886422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       114 ~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~  152 (274)
T cd05076         114 VPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLAR  152 (274)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEec
Confidence            445566899999999999999999  999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.87  E-value=1.5e-21  Score=131.59  Aligned_cols=118  Identities=20%  Similarity=0.256  Sum_probs=93.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||||+++........+.+.+|+.+++.+. ||||+++++++. .....+++|||+++|+|.+++.......         
T Consensus        70 vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~  148 (400)
T cd05105          70 VAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT-KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPK  148 (400)
T ss_pred             EEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc-cCCceEEEEEecCCCcHHHHHHHhhhhhhcccccccc
Confidence            58898876644445678999999999995 999999999998 6778999999999999999987532100         


Q ss_pred             ---------------------------------------------------------------------------HHhhh
Q psy4991          71 ---------------------------------------------------------------------------EREAR   75 (122)
Q Consensus        71 ---------------------------------------------------------------------------~~~~~   75 (122)
                                                                                                 .....
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  228 (400)
T cd05105         149 KDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSD  228 (400)
T ss_pred             ccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHh
Confidence                                                                                       00000


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       229 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~~  272 (400)
T cd05105         229 DGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLAQ  272 (400)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEeC
Confidence            11124667778899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.3e-22  Score=130.79  Aligned_cols=106  Identities=28%  Similarity=0.361  Sum_probs=89.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+.+|+.++..++|+||+++++.+. ..+..+++|||+++++|.+++...+.          
T Consensus        29 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~----------   97 (333)
T cd05600          29 VALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-DDEYLYLAMEYVPGGDFRTLLNNLGV----------   97 (333)
T ss_pred             EEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCC----------
Confidence            5788887542  2234567889999999999999999999998 77889999999999999999875443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        98 --l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~  136 (333)
T cd05600          98 --LSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDA  136 (333)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence              344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.87  E-value=5.6e-22  Score=130.28  Aligned_cols=106  Identities=27%  Similarity=0.360  Sum_probs=87.4

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+++...   .......+.+|+.+++.++||||+.+++.+. ..+..+++|||+.+++|.+.+...+..        
T Consensus        27 ~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~--------   97 (323)
T cd05584          27 FAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMHLEREGIF--------   97 (323)
T ss_pred             EEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-cCCeEEEEEeCCCCchHHHHHHHcCCC--------
Confidence            5788877531   2233456778999999999999999999998 677899999999999999988764433        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        98 ----~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~  135 (323)
T cd05584          98 ----MEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDA  135 (323)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence                33444788999999999999999  999999999999974

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.6e-21  Score=126.46  Aligned_cols=118  Identities=21%  Similarity=0.348  Sum_probs=92.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|..+........+.+.+|++++++++|+|++.+++.+. .....+++|||+.+++|.+++.................
T Consensus        47 vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  125 (295)
T cd05097          47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPS  125 (295)
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCc
Confidence            47888776544445567889999999999999999999998 66788999999999999999865321111111111223


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       126 ~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nill~~  164 (295)
T cd05097         126 VSIANLLYMAVQIASGMKYLASLN--FVHRDLATRNCLVGN  164 (295)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhhEEEcC
Confidence            567778999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.87  E-value=1.3e-21  Score=125.24  Aligned_cols=110  Identities=23%  Similarity=0.293  Sum_probs=87.3

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |+|.+...........+.+|+..++.++|+||+++++.+. .....+++|||+.+|+|.+++.......       ....
T Consensus        26 ~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~   97 (269)
T cd05042          26 VVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-ESIPYLLVLEFCPLGDLKNYLRSNRGMV-------AQMA   97 (269)
T ss_pred             EEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCceEEEEEeCCCCcHHHHHHhccccc-------cccc
Confidence            5565554433334456789999999999999999999998 6778899999999999999997643211       0122


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.....++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        98 ~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~  135 (269)
T cd05042          98 QKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTA  135 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecC
Confidence            34556889999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.87  E-value=1.1e-21  Score=129.28  Aligned_cols=106  Identities=24%  Similarity=0.332  Sum_probs=88.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+++...  .......+.+|..++..+ +||||+.+++++. +.+..+++|||+++|+|..++...+.         
T Consensus        23 ~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~---------   92 (329)
T cd05588          23 YAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-TESRLFFVIEFVSGGDLMFHMQRQRK---------   92 (329)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-cCCEEEEEEeCCCCCCHHHHHHHcCC---------
Confidence            5888887642  223345677899999888 7999999999998 77889999999999999888765443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +++..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~  131 (329)
T cd05588          93 ---LPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDA  131 (329)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence               444555899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0196|consensus

Probab=99.87  E-value=1.4e-22  Score=141.43  Aligned_cols=108  Identities=23%  Similarity=0.387  Sum_probs=98.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++.+..++.+.+|+.|+.+|.+++||||+++.|+.+ ..+.++|+.|||++|+|..||+.+.           .+
T Consensus       660 VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT-ks~PvMIiTEyMENGsLDsFLR~~D-----------Gq  727 (996)
T KOG0196|consen  660 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT-KSKPVMIITEYMENGSLDSFLRQND-----------GQ  727 (996)
T ss_pred             EEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe-cCceeEEEhhhhhCCcHHHHHhhcC-----------Cc
Confidence            79999999988889999999999999999999999999998 7788999999999999999999753           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +..-++..++++|+.||.||-+.+  .+||||..+|||++.+
T Consensus       728 ftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsn  767 (996)
T KOG0196|consen  728 FTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSN  767 (996)
T ss_pred             eEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccc
Confidence            566677899999999999999999  9999999999999753

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.87  E-value=8.1e-22  Score=131.18  Aligned_cols=106  Identities=24%  Similarity=0.353  Sum_probs=88.9

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++...  ......+.+.+|+.++..++|++|+.+++.+. +.+..+++|||+++|+|.+++...+.+         
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~l---------   98 (360)
T cd05627          29 YAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-DKRNLYLIMEFLPGGDMMTLLMKKDTL---------   98 (360)
T ss_pred             EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCccHHHHHHhcCCC---------
Confidence            578888653  12334567788999999999999999999998 778899999999999999998764443         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        99 ---~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~  136 (360)
T cd05627          99 ---SEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDA  136 (360)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECC
Confidence               44455899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.87  E-value=2.5e-21  Score=126.03  Aligned_cols=106  Identities=25%  Similarity=0.422  Sum_probs=87.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++...........+.+|+.+++.++|+||+.+++++. +....++++||+. ++|.+++....           ..
T Consensus        33 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~~   99 (303)
T cd07869          33 VALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-TKETLTLVFEYVH-TDLCQYMDKHP-----------GG   99 (303)
T ss_pred             EEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-cCCeEEEEEECCC-cCHHHHHHhCC-----------CC
Confidence            58888876544444566789999999999999999999998 6778999999997 78877776432           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       100 ~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~  138 (303)
T cd07869         100 LHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISD  138 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            455566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0032|consensus

Probab=99.87  E-value=1.5e-21  Score=130.24  Aligned_cols=105  Identities=32%  Similarity=0.509  Sum_probs=91.1

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|++++...  ....+...+|+.+|+.+. ||||+.++++|+ +....++|||++.||.|.+.+... .         
T Consensus        63 ~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~-~---------  131 (382)
T KOG0032|consen   63 VACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKK-H---------  131 (382)
T ss_pred             eEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHc-c---------
Confidence            58999987732  234578999999999997 999999999999 778899999999999999988764 1         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+.....++.|++.++.|||+.|  ++|||+||+|+|+..
T Consensus       132 ---~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~  170 (382)
T KOG0032|consen  132 ---YSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLAS  170 (382)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeecc
Confidence               445555999999999999999999  999999999999864

>KOG1095|consensus

Probab=99.87  E-value=7.2e-22  Score=142.17  Aligned_cols=113  Identities=22%  Similarity=0.281  Sum_probs=100.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++...+.+...+|++|..+|+.++||||++++|++. +....++++|||++|+|..|+++.++-..     ....
T Consensus       725 vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l-~~~~~~i~leyM~gGDL~sflr~~r~~~~-----~~~~  798 (1025)
T KOG1095|consen  725 VAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL-DSGPPLILLEYMEGGDLLSFLRESRPAPF-----QPSN  798 (1025)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec-CCCCcEEEehhcccCcHHHHHHhcccccC-----CCCC
Confidence            68999999888888999999999999999999999999999 57778899999999999999998654222     1345


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.....+.++.+++.|+.||+++.  ++||||..+|+||+.
T Consensus       799 L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~  837 (1025)
T KOG1095|consen  799 LSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDE  837 (1025)
T ss_pred             CCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecc
Confidence            677788999999999999999999  999999999999985

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.87  E-value=2.2e-21  Score=125.61  Aligned_cols=106  Identities=27%  Similarity=0.410  Sum_probs=87.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..........+.+|+.+++.++|+||+++++++. .....++++||+. ++|.+++...+.           .
T Consensus        33 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~-----------~   99 (288)
T cd07871          33 VALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-TERCLTLVFEYLD-SDLKQYLDNCGN-----------L   99 (288)
T ss_pred             EEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-CCCeEEEEEeCCC-cCHHHHHHhcCC-----------C
Confidence            57888875543444567789999999999999999999998 6678899999998 689888765322           2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       100 ~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~  138 (288)
T cd07871         100 MSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINE  138 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence            345566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.87  E-value=2.4e-21  Score=127.83  Aligned_cols=106  Identities=26%  Similarity=0.430  Sum_probs=88.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+++++.++|+||+.+++++. +.+..+++|||+.+++|.+++...+..           
T Consensus        33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~-----------  100 (333)
T cd06650          33 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRI-----------  100 (333)
T ss_pred             EEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-ECCEEEEEEecCCCCcHHHHHHHcCCC-----------
Confidence            46777665533445577889999999999999999999998 677899999999999999998764433           


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                       .+..+..++.|++.|+.|||+. +  ++|+||||+||++++
T Consensus       101 -~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~  139 (333)
T cd06650         101 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS  139 (333)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcC
Confidence             3445589999999999999974 6  999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.87  E-value=2.4e-21  Score=127.62  Aligned_cols=106  Identities=25%  Similarity=0.417  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+++++.++|+||+++++++. ..+..+++|||+++++|.+++.....            
T Consensus        33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------   99 (331)
T cd06649          33 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKEAKR------------   99 (331)
T ss_pred             EEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEeecCCCCcHHHHHHHcCC------------
Confidence            46777765533445577899999999999999999999998 66788999999999999999876433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+. +  ++|+||||+||+++.
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~  139 (331)
T cd06649         100 IPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNS  139 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcC
Confidence            34455589999999999999985 6  999999999999975

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0660|consensus

Probab=99.86  E-value=2.9e-22  Score=129.32  Aligned_cols=106  Identities=27%  Similarity=0.447  Sum_probs=90.2

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+... ......++..+|+.+|+.++|+||+.+.+.+..    .-+.+|+|+|+|+ .+|.+.++....+..... 
T Consensus        50 VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~-  127 (359)
T KOG0660|consen   50 VAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHA-  127 (359)
T ss_pred             eehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCccccHHHH-
Confidence            678877744 345578999999999999999999999999863    2346999999996 899999997655555555 


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                 ..+++|++.|+.|+|+.+  ++||||||+|++++.
T Consensus       128 -----------q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~  160 (359)
T KOG0660|consen  128 -----------QYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNA  160 (359)
T ss_pred             -----------HHHHHHHHHhcchhhccc--ccccccchhheeecc
Confidence                       899999999999999999  999999999999975

>KOG0597|consensus

Probab=99.86  E-value=6.8e-22  Score=134.50  Aligned_cols=105  Identities=30%  Similarity=0.458  Sum_probs=92.9

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.+. ..++....+.+|+++++.++||||+.++++|+ +...+++|.||+. |+|..++..++.+++...     
T Consensus        30 vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-t~~~~~vVte~a~-g~L~~il~~d~~lpEe~v-----  102 (808)
T KOG0597|consen   30 VAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-TSAHLWVVTEYAV-GDLFTILEQDGKLPEEQV-----  102 (808)
T ss_pred             EEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-ccceEEEEehhhh-hhHHHHHHhccCCCHHHH-----
Confidence            689998876 34456677899999999999999999999999 7888999999998 599999998766555554     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ..++.+++.|+.|||+.+  |+|||+||+|||+..
T Consensus       103 -------~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~  135 (808)
T KOG0597|consen  103 -------RAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEK  135 (808)
T ss_pred             -------HHHHHHHHHHHHHHHhcC--cccccCCcceeeecC
Confidence                   999999999999999999  999999999999864

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.86  E-value=1.8e-21  Score=130.03  Aligned_cols=105  Identities=27%  Similarity=0.325  Sum_probs=87.1

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++.+.  ......+.+.+|+.+++.++||||+++++++. +....+++|||+++|+|.+++...            
T Consensus        71 ~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~------------  137 (370)
T cd05621          71 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-DDKYLYMVMEYMPGGDLVNLMSNY------------  137 (370)
T ss_pred             EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence            578887643  12233456778999999999999999999998 778899999999999999988642            


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+++.++..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       138 -~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~  177 (370)
T cd05621         138 -DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDK  177 (370)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECC
Confidence             2344555889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.86  E-value=5.3e-21  Score=121.99  Aligned_cols=106  Identities=25%  Similarity=0.403  Sum_probs=88.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+.++++++|+||+++++.+.  ....++++||+++++|.+++....           ..
T Consensus        25 vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------~~   91 (257)
T cd05115          25 VAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKK-----------DE   91 (257)
T ss_pred             EEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCC-----------CC
Confidence            57888776544445577889999999999999999999885  356789999999999998886422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        92 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~  130 (257)
T cd05115          92 ITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVN  130 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcC
Confidence            455667999999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=3.5e-21  Score=132.35  Aligned_cols=109  Identities=27%  Similarity=0.355  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+... .......+.+|+.+++.++||||+++++.+. ..+..+++|||+.+|+|.+.+.....        ...+
T Consensus        96 vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~--------~~~~  165 (478)
T PTZ00267         96 VVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFK-SDDKLLLIMEYGSGGDLNKQIKQRLK--------EHLP  165 (478)
T ss_pred             EEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-ECCEEEEEEECCCCCCHHHHHHHHHh--------ccCC
Confidence            355654333 2233456678999999999999999999998 67889999999999999988764211        1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|+|+.+  ++||||||+|||++.
T Consensus       166 l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~  204 (478)
T PTZ00267        166 FQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMP  204 (478)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECC
Confidence            556667899999999999999999  999999999999975

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.86  E-value=6e-21  Score=122.72  Aligned_cols=118  Identities=22%  Similarity=0.296  Sum_probs=95.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh--hhhcC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE--ARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~--~~~~~   78 (122)
                      ||+|.++........+.+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++...+......  .....
T Consensus        38 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~  116 (280)
T cd05049          38 VAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT-EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPM  116 (280)
T ss_pred             EEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-cCCCeEEEEecCCCCCHHHHHHhcCCchhhhccccccc
Confidence            57888776543334678899999999999999999999998 6678899999999999999998654321111  11122


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.++.++|+.+  ++|+||||+||+++.
T Consensus       117 ~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~  157 (280)
T cd05049         117 GELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGY  157 (280)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcC
Confidence            45677888999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0033|consensus

Probab=99.86  E-value=5.9e-22  Score=123.31  Aligned_cols=105  Identities=27%  Similarity=0.383  Sum_probs=87.5

Q ss_pred             eeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           2 CAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      |+|++... .+...-+++.+|+++.+.++||||+++...+. +....|+|+|++.|++|..-+-.....++..+      
T Consensus        40 a~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~a------  112 (355)
T KOG0033|consen   40 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEADA------  112 (355)
T ss_pred             HHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-ccceeEEEEecccchHHHHHHHHHHHHHHHHH------
Confidence            55666654 23446788999999999999999999999998 77888999999999999665554444455545      


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+++||++++.|+|..+  |+|||+||+|+++.+
T Consensus       113 ------SH~~rQiLeal~yCH~n~--IvHRDvkP~nllLAS  145 (355)
T KOG0033|consen  113 ------SHCIQQILEALAYCHSNG--IVHRDLKPENLLLAS  145 (355)
T ss_pred             ------HHHHHHHHHHHHHHHhcC--ceeccCChhheeeee
Confidence                  789999999999999999  999999999999864

>KOG0584|consensus

Probab=99.86  E-value=9e-22  Score=134.34  Aligned_cols=97  Identities=25%  Similarity=0.406  Sum_probs=85.2

Q ss_pred             CcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991          12 LPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV   90 (122)
Q Consensus        12 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (122)
                      +...+++..|+++|+.++|+||+++|..|.+. ...+-+++|.+..|+|..|+++.+.....-.            ..|+
T Consensus        82 ~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kai------------k~W~  149 (632)
T KOG0584|consen   82 PEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAI------------KSWC  149 (632)
T ss_pred             hHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHH------------HHHH
Confidence            44568999999999999999999999999722 2357789999999999999998776555444            8999


Q ss_pred             HHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +||+.||.|||+..|||+|||||.+||+++
T Consensus       150 RQILkGL~yLHs~~PPIIHRDLKCDNIFin  179 (632)
T KOG0584|consen  150 RQILKGLVYLHSQDPPIIHRDLKCDNIFVN  179 (632)
T ss_pred             HHHHHHhhhhhcCCCCccccccccceEEEc
Confidence            999999999999999999999999999986

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.5e-21  Score=129.26  Aligned_cols=106  Identities=29%  Similarity=0.395  Sum_probs=89.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+.+|+.++..++|+||+.+++.+. +.+..+++|||+.+++|..++...+.          
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------   97 (350)
T cd05573          29 YAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ-DEEHLYLVMEYMPGGDLMNLLIRKDV----------   97 (350)
T ss_pred             EEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee-cCCeEEEEEcCCCCCCHHHHHHHcCC----------
Confidence            5888887542  2234567888999999999999999999998 77889999999999999999876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        98 --l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~  136 (350)
T cd05573          98 --FPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDA  136 (350)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence              344455899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.86  E-value=5.6e-21  Score=121.30  Aligned_cols=107  Identities=22%  Similarity=0.310  Sum_probs=88.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.............+.+|++++++++|+||+++++++. .....++++||+.+++|.+++....           ..
T Consensus        23 ~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~   90 (252)
T cd05084          23 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEG-----------PR   90 (252)
T ss_pred             EEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCeEEEEeeccCCcHHHHHHhCC-----------CC
Confidence            46777665433445577899999999999999999999998 6678899999999999999886432           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        91 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~  129 (252)
T cd05084          91 LKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTE  129 (252)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcC
Confidence            445566899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.86  E-value=3.3e-21  Score=126.96  Aligned_cols=106  Identities=25%  Similarity=0.347  Sum_probs=87.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .......+.+|+.++.++ +||||+.+++++. ..+..+++|||+.+|+|...+...+.         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~~~~---------   92 (329)
T cd05618          23 YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRK---------   92 (329)
T ss_pred             EEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-eCCEEEEEEeCCCCCCHHHHHHHcCC---------
Confidence            5788887652  223445677888888877 8999999999998 67889999999999999888765433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +++..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~  131 (329)
T cd05618          93 ---LPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDS  131 (329)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECC
Confidence               444555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.86  E-value=2.8e-21  Score=126.86  Aligned_cols=106  Identities=25%  Similarity=0.313  Sum_probs=87.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+++...  .....+.+..|.+++... +||||+.+++++. ..+..+++|||+.+++|...+...+.         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~~---------   92 (321)
T cd05591          23 YAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-TKDRLFFVMEYVNGGDLMFQIQRSRK---------   92 (321)
T ss_pred             EEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCeEEEEEeCCCCCcHHHHHHHcCC---------
Confidence            5888887642  233456677889888876 8999999999998 77889999999999999888876443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~  131 (321)
T cd05591          93 ---FDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDA  131 (321)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence               334455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.86  E-value=7e-21  Score=123.57  Aligned_cols=117  Identities=22%  Similarity=0.377  Sum_probs=93.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+++.+|+.+++.++|+||+.+++.+. ..+..++++||+.+++|..++......... .......
T Consensus        49 ~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~  126 (296)
T cd05095          49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI-TSDPLCMITEYMENGDLNQFLSRHEPQEAA-EKADVVT  126 (296)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEeCCCCcHHHHHHhcCccccc-ccccccc
Confidence            46777775544445678899999999999999999999997 667789999999999999998764332111 1112234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       127 ~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~Nili~~  165 (296)
T cd05095         127 ISYSTLIFMATQIASGMKYLSSLN--FVHRDLATRNCLVGK  165 (296)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCC--eecccCChheEEEcC
Confidence            667788999999999999999999  999999999999964

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.86  E-value=2.4e-21  Score=127.22  Aligned_cols=106  Identities=25%  Similarity=0.374  Sum_probs=87.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++.+..  .....+.+..|..++... +||||+.+++++. ..+.++++|||+.+|+|...+.....+        
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-~~~~~~iv~Ey~~~g~L~~~i~~~~~l--------   93 (320)
T cd05590          23 YAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSRRF--------   93 (320)
T ss_pred             EEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-cCCEEEEEEcCCCCchHHHHHHHcCCC--------
Confidence            5888887541  233456677888888877 7999999999998 778899999999999999888764443        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..+..++.|++.|+.|||+.+  ++||||||+||++++
T Consensus        94 ----~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~  131 (320)
T cd05590          94 ----DEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDH  131 (320)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECC
Confidence                34455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.86  E-value=3.5e-21  Score=128.69  Aligned_cols=105  Identities=26%  Similarity=0.284  Sum_probs=86.8

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+.+.  ......+.+.+|+.+++.++||||+.+++++. +.+..+++|||+++|+|..++...            
T Consensus        71 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~------------  137 (370)
T cd05596          71 YAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-DDKYLYMVMEYMPGGDLVNLMSNY------------  137 (370)
T ss_pred             EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence            578888653  12233455778999999999999999999988 778899999999999999988642            


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+++..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       138 -~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~  177 (370)
T cd05596         138 -DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDK  177 (370)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcC
Confidence             2344455888999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.86  E-value=8.2e-21  Score=121.55  Aligned_cols=107  Identities=24%  Similarity=0.393  Sum_probs=89.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.++........+.+.+|+.++++++||||+++++.+. ..+..++++||+++++|.+++....           ..
T Consensus        35 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~  102 (267)
T cd05066          35 VAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHD-----------GQ  102 (267)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcC-----------CC
Confidence            46777765543445578899999999999999999999997 6678899999999999999887532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~  141 (267)
T cd05066         103 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNS  141 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECC
Confidence            455566899999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=4.6e-21  Score=123.06  Aligned_cols=115  Identities=23%  Similarity=0.348  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|++++++++|+|++.+++.+. +....++++||+++++|.+++.........   .....
T Consensus        38 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~---~~~~~  113 (275)
T cd05046          38 VLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-EAEPHYMILEYTDLGDLKQFLRATKSKDEK---LKPPP  113 (275)
T ss_pred             EEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-CCCcceEEEEecCCCcHHHHHHhccccccc---ccccC
Confidence            35666654432224567899999999999999999999887 667789999999999999998764311100   11224


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|||+.+  ++|+||||+||+++.
T Consensus       114 l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~  152 (275)
T cd05046         114 LSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSS  152 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeC
Confidence            667778999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.86  E-value=3.6e-21  Score=126.14  Aligned_cols=106  Identities=22%  Similarity=0.336  Sum_probs=85.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+++...  .....+....|..++... +||||+.+++.+. .....+++|||+.+|+|...+...+.         
T Consensus        23 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~~~~~---------   92 (316)
T cd05592          23 FAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQSSGR---------   92 (316)
T ss_pred             EEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence            5888887542  223445566777777655 8999999999998 77889999999999999988876443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~  131 (316)
T cd05592          93 ---FDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDK  131 (316)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECC
Confidence               344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.86  E-value=1.1e-20  Score=120.89  Aligned_cols=107  Identities=22%  Similarity=0.355  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..........+.+|+.++++++|+||+++++.+. ..+..++++||+.+++|.+++....           ..
T Consensus        35 vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~-----------~~  102 (266)
T cd05033          35 VAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-KSRPVMIITEYMENGSLDKFLREND-----------GK  102 (266)
T ss_pred             EEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-cCCceEEEEEcCCCCCHHHHHHhcc-----------CC
Confidence            57888776544445677889999999999999999999987 6677899999999999999887532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 ~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~  141 (266)
T cd05033         103 FTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNS  141 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcC
Confidence            455666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.86  E-value=2.9e-21  Score=123.38  Aligned_cols=108  Identities=32%  Similarity=0.507  Sum_probs=89.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      |+||.++........+.+.+|++.+++++||||++++|++. ..+..++++||+.+|+|.+++...          ....
T Consensus        31 V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~----------~~~~   99 (259)
T PF07714_consen   31 VAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSK----------NKEP   99 (259)
T ss_dssp             EEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHT----------CTTT
T ss_pred             EEEEEeccccccccceeeeeccccccccccccccccccccc-cccccccccccccccccccccccc----------cccc
Confidence            57898876544445788999999999999999999999998 667788999999999999999875          1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+++||+++.
T Consensus       100 ~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~  138 (259)
T PF07714_consen  100 LSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDS  138 (259)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEET
T ss_pred             cccccccccccccccccccccccc--ccccccccccccccc
Confidence            566677999999999999999999  999999999999985

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.86  E-value=6.7e-21  Score=123.41  Aligned_cols=117  Identities=22%  Similarity=0.381  Sum_probs=94.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|++++++++|+|++++++++. ..+..++++|++.+++|..++.......... ......
T Consensus        49 va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~  126 (296)
T cd05051          49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGL-ACNSKS  126 (296)
T ss_pred             EEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccc-cccCCC
Confidence            47787776644445677889999999999999999999998 6678889999999999999997644211111 112345


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       127 ~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~Nili~~  165 (296)
T cd05051         127 LSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGK  165 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhceeecC
Confidence            677888999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.86  E-value=8.5e-21  Score=121.39  Aligned_cols=106  Identities=18%  Similarity=0.256  Sum_probs=85.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+... .....+.+.+|+.+++.++||||+.+++++. +....++++||+.+++|..++....           ..
T Consensus        35 v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~  101 (262)
T cd05077          35 VILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCV-RDVENIMVEEFVEFGPLDLFMHRKS-----------DV  101 (262)
T ss_pred             EEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCCCEEEEecccCCCHHHHHHhcC-----------CC
Confidence            356665543 2234567788899999999999999999998 6667789999999999988876422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       102 ~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~  140 (262)
T cd05077         102 LTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAR  140 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEec
Confidence            455566899999999999999999  999999999999963

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA02988 hypothetical protein; Provisional

Probab=99.85  E-value=4.9e-21  Score=123.86  Aligned_cols=107  Identities=15%  Similarity=0.130  Sum_probs=86.7

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||.++.....  ...+.+.+|+.++++++||||+++++++..   .....++++||+.+|+|.+++.....       
T Consensus        46 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~-------  118 (283)
T PHA02988         46 VIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD-------  118 (283)
T ss_pred             EEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCC-------
Confidence            588888765211  124677899999999999999999999863   13568899999999999999976433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                           +.+.....++.+++.|+.|+|+. +  ++||||||+||+++.
T Consensus       119 -----~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~  158 (283)
T PHA02988        119 -----LSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTE  158 (283)
T ss_pred             -----CChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECC
Confidence                 33445589999999999999984 6  889999999999975

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.85  E-value=6.8e-21  Score=123.14  Aligned_cols=108  Identities=23%  Similarity=0.266  Sum_probs=87.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .......+.+|+.+++.++|++++.+++.+. +.+..++++||+.+|+|...+.....          
T Consensus        28 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~----------   96 (285)
T cd05631          28 YACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGN----------   96 (285)
T ss_pred             EEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-cCCeEEEEEEecCCCcHHHHHHhhCC----------
Confidence            5788776542  1223356788999999999999999999998 67789999999999999877754221          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++||||||+||++++
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~  137 (285)
T cd05631          97 PGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDD  137 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECC
Confidence            23455666899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.85  E-value=1.2e-20  Score=120.87  Aligned_cols=107  Identities=22%  Similarity=0.375  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+..|+.+++.++||||+++.+.+. +....++++||+.+++|.+++....           ..
T Consensus        35 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  102 (269)
T cd05065          35 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-KSRPVMIITEFMENGALDSFLRQND-----------GQ  102 (269)
T ss_pred             EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-CCCceEEEEecCCCCcHHHHHhhCC-----------CC
Confidence            57888776544445678899999999999999999999987 6777889999999999999887532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.+++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 ~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~  141 (269)
T cd05065         103 FTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNS  141 (269)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcC
Confidence            455666899999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.85  E-value=3.7e-21  Score=126.60  Aligned_cols=106  Identities=24%  Similarity=0.332  Sum_probs=88.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|+++...  .....+.+.+|+.++.++ +|++|+.+++++. +.+.++++|||+++|+|...+...+.         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~---------   92 (327)
T cd05617          23 YAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-TTSRLFLVIEYVNGGDLMFHMQRQRK---------   92 (327)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence            5788887652  223456678899999888 6999999999998 77889999999999999888765433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~  131 (327)
T cd05617          93 ---LPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDA  131 (327)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeC
Confidence               445555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0578|consensus

Probab=99.85  E-value=2e-21  Score=131.34  Aligned_cols=104  Identities=22%  Similarity=0.389  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.+... .+...+-+.+|+.+|+..+|+|||.++..|. -.+.+|+|||||+||+|.+.+...             .
T Consensus       301 VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-v~deLWVVMEym~ggsLTDvVt~~-------------~  365 (550)
T KOG0578|consen  301 VAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYL-VGDELWVVMEYMEGGSLTDVVTKT-------------R  365 (550)
T ss_pred             EEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhc-ccceeEEEEeecCCCchhhhhhcc-------------c
Confidence            678887766 2345567789999999999999999999998 568899999999999999988753             3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..+.++++.||.|||..+  |+|||||.+|||++.
T Consensus       366 ~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~  404 (550)
T KOG0578|consen  366 MTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTM  404 (550)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEecc
Confidence            556677899999999999999999  999999999999975

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.85  E-value=4.1e-21  Score=126.03  Aligned_cols=106  Identities=32%  Similarity=0.473  Sum_probs=83.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++.+..  .......+..|.. +++.++|+||+.+++.+. +.+..+++|||+++++|...+.....         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------   92 (321)
T cd05603          23 YAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-TAEKLYFVLDYVNGGELFFHLQRERC---------   92 (321)
T ss_pred             EEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence            5788876541  2223345555654 577889999999999988 77889999999999999887765433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~  131 (321)
T cd05603          93 ---FLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDS  131 (321)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence               344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.85  E-value=1.1e-20  Score=123.82  Aligned_cols=106  Identities=20%  Similarity=0.244  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++........+.+.+|+.+++.++|+||+.+++.+. . ...++++||+.+|+|.+++....           ..
T Consensus        39 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~-~-~~~~~v~e~~~~g~l~~~l~~~~-----------~~  105 (316)
T cd05108          39 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-T-STVQLITQLMPFGCLLDYVREHK-----------DN  105 (316)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc-C-CCceeeeecCCCCCHHHHHHhcc-----------cc
Confidence            47888875544455678889999999999999999999997 3 34668999999999999887532           12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~  144 (316)
T cd05108         106 IGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKT  144 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecC
Confidence            445556899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.85  E-value=5.3e-21  Score=125.62  Aligned_cols=106  Identities=30%  Similarity=0.454  Sum_probs=84.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++....  .......+..|.. +++.++||||+.+++.+. +.+..+++|||+.+|+|..++...+.+        
T Consensus        23 vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~--------   93 (323)
T cd05575          23 YAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TADKLYFVLDYVNGGELFFHLQRERSF--------   93 (323)
T ss_pred             EEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-eCCEEEEEEcCCCCCCHHHHHHhcCCC--------
Confidence            5788886541  1223345555555 457789999999999998 778899999999999999888764433        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        94 ----~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~  131 (323)
T cd05575          94 ----PEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDS  131 (323)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECC
Confidence                34455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.85  E-value=9.3e-21  Score=123.72  Aligned_cols=106  Identities=26%  Similarity=0.415  Sum_probs=87.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+++++.++||||+.+++++. ..+..++++||+++++|.+++...+.            
T Consensus        29 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~~~------------   95 (308)
T cd06615          29 MARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGR------------   95 (308)
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhcCC------------
Confidence            35676665433334567889999999999999999999998 67889999999999999999876433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+ .+  ++|+|++|+||+++.
T Consensus        96 ~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~  135 (308)
T cd06615          96 IPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNS  135 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEec
Confidence            3445558999999999999998 47  999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=5.5e-21  Score=126.00  Aligned_cols=107  Identities=22%  Similarity=0.278  Sum_probs=88.4

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+.  ......+.+.+|..++..++|+||+.+++++. +.+..+++|||+.+|+|.+++....           
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~-----------   96 (331)
T cd05597          29 YAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFE-----------   96 (331)
T ss_pred             EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-cCCeEEEEEecCCCCcHHHHHHHhc-----------
Confidence            578888653  12334466788999999999999999999998 7788999999999999999986522           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~  137 (331)
T cd05597          97 DRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDK  137 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECC
Confidence            23445556889999999999999999  999999999999964

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.6e-20  Score=121.04  Aligned_cols=106  Identities=23%  Similarity=0.239  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++..........+.+|+++++.++|+||+++++.+... ....+++|||+.+++|.+++...             
T Consensus        36 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-------------  102 (283)
T cd05080          36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-------------  102 (283)
T ss_pred             EEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-------------
Confidence            4778877653334557788999999999999999999987633 34688999999999999888642             


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.+++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       103 ~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~  142 (283)
T cd05080         103 KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDN  142 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcC
Confidence            3455666999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.85  E-value=9.9e-21  Score=120.37  Aligned_cols=92  Identities=25%  Similarity=0.288  Sum_probs=79.9

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ...+.+|+.+++.++|+|++.+++.+. . ...++++||+++|+|.+++.....           .+.+..+..++.|++
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~-~-~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~~~i~  111 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCV-R-DENIMVEEYVKFGPLDVFLHREKN-----------NVSLHWKLDVAKQLA  111 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEe-c-CCcEEEEEcCCCCcHHHHHHhhcc-----------CCCHHHHHHHHHHHH
Confidence            578889999999999999999999997 4 667899999999999999876431           344455689999999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .|+.|||+.+  ++|+||||+||+++.
T Consensus       112 ~~l~~LH~~~--i~H~dlkp~Nill~~  136 (259)
T cd05037         112 SALHYLEDKK--LVHGNVCGKNILVAR  136 (259)
T ss_pred             HHHHHHhhCC--eecccCccceEEEec
Confidence            9999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.85  E-value=6.4e-21  Score=125.48  Aligned_cols=107  Identities=21%  Similarity=0.292  Sum_probs=88.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+.+|+.+++.++|+||+.+++.+. +....+++|||+++|+|.+++....           
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------   96 (330)
T cd05601          29 YAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-DKDNLYLVMEYQPGGDLLSLLNRYE-----------   96 (330)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-cCCeEEEEECCCCCCCHHHHHHHhc-----------
Confidence            5788887542  2234566788999999999999999999998 6778999999999999999987641           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        97 ~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~  137 (330)
T cd05601          97 DQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDR  137 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECC
Confidence            23455556889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.85  E-value=1.3e-20  Score=123.13  Aligned_cols=108  Identities=18%  Similarity=0.177  Sum_probs=91.0

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|+++.. ........+.+|+.+++.++|+||+.+++++. +....++++||+++++|..++.....          .
T Consensus        28 ~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~----------~   96 (314)
T cd08216          28 VAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-VDSELYVVSPLMAYGSCEDLLKTHFP----------E   96 (314)
T ss_pred             EEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-cCCeEEEEEeccCCCCHHHHHHHhcc----------c
Confidence            588888765 33445678899999999999999999999998 67788999999999999998875321          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~  136 (314)
T cd08216          97 GLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSG  136 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEec
Confidence            3455566889999999999999999  999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.85  E-value=1.3e-20  Score=121.18  Aligned_cols=116  Identities=19%  Similarity=0.253  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+||+++++.+. .....++++||+++++|.+++..........  .....
T Consensus        39 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~--~~~~~  115 (277)
T cd05062          39 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPEMENN--PVQAP  115 (277)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCeEEEEecCCCCCHHHHHHHcCcccccc--ccccC
Confidence            47777765433334567889999999999999999999987 6678899999999999999987533211100  01123


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~  154 (277)
T cd05062         116 PSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAE  154 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcC
Confidence            456677899999999999999998  999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.85  E-value=1.5e-20  Score=122.44  Aligned_cols=118  Identities=20%  Similarity=0.283  Sum_probs=92.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch----hHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI----AEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~   75 (122)
                      ||+|...........+.+.+|+.+++.+ +|+||+++++.+. .....++++||+.+++|.+++......    ......
T Consensus        50 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  128 (304)
T cd05101          50 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR  128 (304)
T ss_pred             EEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence            4667666443333456788999999999 8999999999998 667889999999999999999864321    111111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       129 ~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nili~~  172 (304)
T cd05101         129 VPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVLVTE  172 (304)
T ss_pred             CCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEEEcC
Confidence            22345677788999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.85  E-value=8.1e-21  Score=122.52  Aligned_cols=110  Identities=22%  Similarity=0.259  Sum_probs=88.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .....+.+..|+.+++.++|+||+.+.+++. .....+++|||+++|+|...+.....        ..
T Consensus        21 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~--------~~   91 (280)
T cd05608          21 YACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-TKTDLCLVMTIMNGGDLRYHIYNVDE--------EN   91 (280)
T ss_pred             EEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-CCCeEEEEEeCCCCCCHHHHHHhccc--------cC
Confidence            5788776542  1223456778999999999999999999988 66788999999999999877753211        11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        92 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~  132 (280)
T cd05608          92 PGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDN  132 (280)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence            34566777999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.85  E-value=1.2e-20  Score=122.99  Aligned_cols=117  Identities=19%  Similarity=0.246  Sum_probs=91.9

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----hh
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----RC   76 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~   76 (122)
                      |+|.++..........+.+|+.++.++ +|+||+++++.+. ..+..++++||+++++|.+++...+.......    ..
T Consensus        38 ~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (303)
T cd05088          38 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  116 (303)
T ss_pred             EEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-CCCCceEEEEeCCCCcHHHHHHhccccccccccccccc
Confidence            556555443334456788899999999 8999999999998 66778999999999999999986543221111    11


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       117 ~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~  159 (303)
T cd05088         117 TASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE  159 (303)
T ss_pred             ccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecC
Confidence            1235677888999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.85  E-value=8.6e-21  Score=126.86  Aligned_cols=105  Identities=28%  Similarity=0.326  Sum_probs=86.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++...  ......+.+.+|+.+++.++||||+++++++. +.+..+++|||+++|+|.+++...            
T Consensus        71 ~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~~~~~------------  137 (371)
T cd05622          71 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLMSNY------------  137 (371)
T ss_pred             EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHhc------------
Confidence            477877643  12233456778999999999999999999998 778899999999999999988642            


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+++..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       138 -~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~  177 (371)
T cd05622         138 -DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDK  177 (371)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECC
Confidence             2344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.85  E-value=1.7e-20  Score=126.52  Aligned_cols=118  Identities=20%  Similarity=0.256  Sum_probs=92.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH-------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-------   72 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-------   72 (122)
                      ||+|+++........+.+.+|+.++..+. |+||+.+++++. ..+..++++||+.+|+|.+++...+.....       
T Consensus        70 vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~-~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  148 (401)
T cd05107          70 VAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT-KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNR  148 (401)
T ss_pred             EEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc-cCCCcEEEEeccCCCcHHHHHHhccccchhhhccccc
Confidence            58899986644444567889999999997 999999999998 667789999999999999999754320000       


Q ss_pred             -------------------------------------------------------------------------------h
Q psy4991          73 -------------------------------------------------------------------------------E   73 (122)
Q Consensus        73 -------------------------------------------------------------------------------~   73 (122)
                                                                                                     .
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (401)
T cd05107         149 DDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDT  228 (401)
T ss_pred             ccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhh
Confidence                                                                                           0


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .......+.+..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus       229 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiLl~~  274 (401)
T cd05107         229 LINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVLICE  274 (401)
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEEEeC
Confidence            0001123556678899999999999999998  999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.85  E-value=6.9e-21  Score=125.18  Aligned_cols=106  Identities=29%  Similarity=0.472  Sum_probs=84.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|++....  .......+..|.. +++.++||||+.+++.+. ..+..+++|||+.+|+|...+...+.         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------   92 (325)
T cd05604          23 YAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-TTEKLYFVLDFVNGGELFFHLQRERS---------   92 (325)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence            5788876541  2223345556655 466789999999999998 77889999999999999888765433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~  131 (325)
T cd05604          93 ---FPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDS  131 (325)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence               444555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1e-20  Score=122.34  Aligned_cols=108  Identities=23%  Similarity=0.276  Sum_probs=88.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .......+.+|+.+++.++|+||+.+++.+. +.+..+++|||+.+|+|...+.....          
T Consensus        28 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------   96 (285)
T cd05605          28 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYNMGN----------   96 (285)
T ss_pred             EEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-CCCeEEEEEeccCCCcHHHHHHhcCc----------
Confidence            5788876542  1223355778999999999999999999998 66789999999999999887754221          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+++..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        97 ~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~  137 (285)
T cd05605          97 PGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDD  137 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECC
Confidence            23556667899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.85  E-value=2e-20  Score=119.90  Aligned_cols=109  Identities=18%  Similarity=0.254  Sum_probs=87.1

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      ++|.+.........+.+.+|+.+++.++|||++++++.+. +....+++|||+.+|+|.+++......        ....
T Consensus        26 ~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~--------~~~~   96 (268)
T cd05086          26 VVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-EAIPYLLVFEYCELGDLKSYLSQEQWH--------RRNS   96 (268)
T ss_pred             EEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-CCCccEEEEecCCCCcHHHHHHhhhcc--------cccc
Confidence            3455444433345678899999999999999999999998 667889999999999999998753221        1123


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~  134 (268)
T cd05086          97 QLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTS  134 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcC
Confidence            44456789999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.85  E-value=7.1e-21  Score=124.83  Aligned_cols=106  Identities=24%  Similarity=0.344  Sum_probs=87.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .......+.+|..+++.+ +|+||+.+++++. +.+..+++|||+.+|+|...+...+.         
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~---------   92 (318)
T cd05570          23 YAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQRSGR---------   92 (318)
T ss_pred             EEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence            5788887542  233456677889988888 7999999999998 77889999999999999888765433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +++..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        93 ---l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~  131 (318)
T cd05570          93 ---FDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDS  131 (318)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECC
Confidence               445555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.85  E-value=7.7e-21  Score=125.19  Aligned_cols=106  Identities=20%  Similarity=0.272  Sum_probs=87.2

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|++.+..   .....+.+.+|+.++..+ +|++|+.+++++. ..+..+++|||+.+|+|...+.....        
T Consensus        31 ~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~--------  101 (332)
T cd05614          31 YAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ-TEAKLHLILDYVSGGEMFTHLYQRDN--------  101 (332)
T ss_pred             EEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-cCCEEEEEEeCCCCCcHHHHHHHcCC--------
Confidence            4778776431   223456678899999999 5999999999988 67788999999999999998875433        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       102 ----~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~  140 (332)
T cd05614         102 ----FSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDS  140 (332)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECC
Confidence                344555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.85  E-value=8.2e-21  Score=124.48  Aligned_cols=106  Identities=20%  Similarity=0.267  Sum_probs=86.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|.++...  .....+....|..++... +|++|+.+++.+. +.+..+++|||+.+|+|...+.....+        
T Consensus        23 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~i~~~~~~--------   93 (316)
T cd05620          23 FAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-TKEHLFFVMEFLNGGDLMFHIQDKGRF--------   93 (316)
T ss_pred             EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-eCCEEEEEECCCCCCcHHHHHHHcCCC--------
Confidence            5788887642  123445667788888765 8999999999998 678899999999999999888764433        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        94 ----~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~  131 (316)
T cd05620          94 ----DLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDR  131 (316)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence                34445889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.85  E-value=1.8e-20  Score=120.70  Aligned_cols=118  Identities=21%  Similarity=0.314  Sum_probs=93.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----hh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----RC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~   76 (122)
                      ||+|.+.........+.+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++...........    ..
T Consensus        38 v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (283)
T cd05048          38 VAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET  116 (283)
T ss_pred             EEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-CCCceEEEEecCCCCcHHHHHHhcCCCccccccccccc
Confidence            46777765544445567889999999999999999999998 66778899999999999999976433211111    11


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       117 ~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~  159 (283)
T cd05048         117 VKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE  159 (283)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence            1235677788999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.85  E-value=1.7e-20  Score=121.40  Aligned_cols=116  Identities=22%  Similarity=0.268  Sum_probs=90.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+||+++++.+. .....+++|||+.+|+|.+++..........  .....
T Consensus        39 vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~--~~~~~  115 (288)
T cd05061          39 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENN--PGRPP  115 (288)
T ss_pred             EEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCcEEEEeCCCCCCHHHHHHHhccccccC--CCCCC
Confidence            47787765533334456788999999999999999999987 6677899999999999999997643211110  11233


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+..++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~  154 (288)
T cd05061         116 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAH  154 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcC
Confidence            445667889999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0666|consensus

Probab=99.85  E-value=2e-21  Score=124.33  Aligned_cols=110  Identities=26%  Similarity=0.426  Sum_probs=93.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.++.. ...+......+|+.+++.++|+|++++..++......+++++||.+ .+|+++++.+..-.       ..
T Consensus        56 yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~-------~~  127 (438)
T KOG0666|consen   56 YAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASK-------AK  127 (438)
T ss_pred             hHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccch-------hc
Confidence            467777755 2345778999999999999999999999999745788999999998 89999998765421       13


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .++...+..++-||+.|+.|||++.  ++||||||+|||+.
T Consensus       128 ~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvm  166 (438)
T KOG0666|consen  128 QLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVM  166 (438)
T ss_pred             cCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEe
Confidence            6677888999999999999999999  99999999999986

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.85  E-value=2.5e-20  Score=120.35  Aligned_cols=108  Identities=20%  Similarity=0.255  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++..........+.+|+.+++.++|+|++.+.+++... ....++++||+++++|.+++....           .
T Consensus        36 va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----------~  104 (284)
T cd05079          36 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK-----------N  104 (284)
T ss_pred             EEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhcc-----------C
Confidence            5788877554444567789999999999999999999988733 356889999999999999886432           1


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.++.|+|+.+  ++|+|+||+||+++.
T Consensus       105 ~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~  144 (284)
T cd05079         105 KINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVES  144 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcC
Confidence            3455666899999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.85  E-value=1.6e-20  Score=122.30  Aligned_cols=108  Identities=21%  Similarity=0.297  Sum_probs=89.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++........+.+.+|+.+++++ +|+||+++++.+. ..+..++++||+.+|+|..++.....          .
T Consensus        68 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~----------~  136 (302)
T cd05055          68 VAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-IGGPILVITEYCCYGDLLNFLRRKRE----------S  136 (302)
T ss_pred             EEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe-cCCceEEEEEcCCCCcHHHHHHhCCC----------C
Confidence            4677776553334456788999999999 7999999999988 66788999999999999998865321          1


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.++..++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       137 ~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~  176 (302)
T cd05055         137 FLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTH  176 (302)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcC
Confidence            2456667999999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.85  E-value=1.1e-20  Score=123.99  Aligned_cols=106  Identities=21%  Similarity=0.312  Sum_probs=86.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+++...  .....+....|..++... +||||+.+++++. +.+.++++|||+++|+|...+.....         
T Consensus        23 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~~---------   92 (316)
T cd05619          23 FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-TKENLFFVMEYLNGGDLMFHIQSCHK---------   92 (316)
T ss_pred             EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence            5888887652  233445667788888765 9999999999998 67789999999999999998875433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        93 ---~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~  131 (316)
T cd05619          93 ---FDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDT  131 (316)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECC
Confidence               344455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=8.5e-21  Score=122.52  Aligned_cols=106  Identities=21%  Similarity=0.371  Sum_probs=85.7

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|++.... .....+.+.+|+.+++.++|+||+.+++++. ..+..+++|||+.++.+..+....            .
T Consensus        29 ~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~------------~   95 (287)
T cd07848          29 VAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-RRGKLYLVFEYVEKNMLELLEEMP------------N   95 (287)
T ss_pred             EEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-cCCEEEEEEecCCCCHHHHHHhcC------------C
Confidence            5788887552 2334577889999999999999999999998 677899999999976665443322            2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        96 ~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~  135 (287)
T cd07848          96 GVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISH  135 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence            3455566899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.85  E-value=3.5e-20  Score=118.43  Aligned_cols=106  Identities=25%  Similarity=0.302  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...  ......+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++.....          ..
T Consensus        34 ~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~  100 (263)
T cd05052          34 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR----------QE  100 (263)
T ss_pred             EEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEc-CCCCcEEEEEeCCCCcHHHHHHhCCC----------CC
Confidence            467776644  223567889999999999999999999998 66778899999999999998865321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       101 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~  139 (263)
T cd05052         101 VNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE  139 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcC
Confidence            455666899999999999999999  999999999999964

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.85  E-value=1.8e-20  Score=120.63  Aligned_cols=113  Identities=22%  Similarity=0.236  Sum_probs=91.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.............+.+|+.+++.++|+||+++++.+. +....++++||+.+++|.+++...+....     ....
T Consensus        39 v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~i~~~~~~~~-----~~~~  112 (277)
T cd05036          39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF-ERLPRFILLELMAGGDLKSFLRENRPRPE-----RPSS  112 (277)
T ss_pred             EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCcEEEEecCCCCCHHHHHHHhCCCCC-----CCCC
Confidence            46676665433334567889999999999999999999887 56677899999999999999876542111     1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 ~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~  151 (277)
T cd05036         113 LTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTC  151 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEec
Confidence            677788999999999999999999  999999999999963

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.85  E-value=1.4e-20  Score=123.86  Aligned_cols=108  Identities=14%  Similarity=0.188  Sum_probs=89.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|+..... .....+.+.+|+.+++.++|+||+++++++. .++..++++||+.++++..++.....          .
T Consensus        28 vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~~----------~   96 (328)
T cd08226          28 VTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-TGSWLWVISPFMAYGSANSLLKTYFP----------E   96 (328)
T ss_pred             EEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-cCCceEEEEecccCCCHHHHHHhhcc----------c
Confidence            5788877542 2234467788999999999999999999998 67788999999999999988875322          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~  136 (328)
T cd08226          97 GMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISG  136 (328)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeC
Confidence            3556666899999999999999999  999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.85  E-value=2.8e-20  Score=119.34  Aligned_cols=117  Identities=19%  Similarity=0.246  Sum_probs=91.7

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh----hhh
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE----ARC   76 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~   76 (122)
                      |+|.++........+.+.+|+.+++++ +||||+++++.+. ..+..+++|||+++++|.+++..........    ...
T Consensus        26 ~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~  104 (270)
T cd05047          26 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  104 (270)
T ss_pred             EEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-cCCCceEEEEeCCCCcHHHHHHhccccccccccccccC
Confidence            566666443334556788999999999 8999999999998 6677889999999999999997644321110    011


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+.++..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       105 ~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~  147 (270)
T cd05047         105 TASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE  147 (270)
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcC
Confidence            1234677888999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.84  E-value=3.9e-20  Score=117.89  Aligned_cols=105  Identities=22%  Similarity=0.320  Sum_probs=88.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+.+.+|+.++++++||||+++++++. .....++++||+.+++|.+++....           ..
T Consensus        31 ~aik~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~-----------~~   96 (256)
T cd05113          31 VAIKMIKEG--SMSEDEFIEEAKVMMKLSHEKLVQLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHG-----------KR   96 (256)
T ss_pred             EEEEEcCCC--cccHHHHHHHHHHHhcCCCCCeeeEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcC-----------CC
Confidence            478877654  223467899999999999999999999997 6677899999999999999887532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~  135 (256)
T cd05113          97 FQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDD  135 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcC
Confidence            456677999999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.84  E-value=3.7e-20  Score=117.83  Aligned_cols=105  Identities=23%  Similarity=0.321  Sum_probs=87.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+++.+|+.+++.++||||+++++.+. .....+++|||+.+|+|.+++....           ..
T Consensus        31 ~a~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~-----------~~   96 (256)
T cd05114          31 VAIKAINEG--AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT-QQKPLYIVTEFMENGCLLNYLRQRQ-----------GK   96 (256)
T ss_pred             EEEEecccC--CccHHHHHHHHHHHHHCCCCCceeEEEEEc-cCCCEEEEEEcCCCCcHHHHHHhCc-----------cC
Confidence            467776644  223567889999999999999999999998 6778899999999999998886432           12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~  135 (256)
T cd05114          97 LSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSS  135 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcC
Confidence            445566899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.84  E-value=1.2e-20  Score=124.35  Aligned_cols=106  Identities=24%  Similarity=0.373  Sum_probs=84.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+.... .......+.+|+.+++.++||||+.+++++....    ...++++||+. ++|.+.+.....       
T Consensus        28 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-------   99 (338)
T cd07859          28 VAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDD-------   99 (338)
T ss_pred             EEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhccc-------
Confidence            5788877542 2234456889999999999999999999885221    35789999996 789888875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..+..++.|++.|+.|||+.+  ++|+||||+|||++.
T Consensus       100 -----~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~  138 (338)
T cd07859         100 -----LTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANA  138 (338)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence                 344555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.84  E-value=2.1e-20  Score=120.56  Aligned_cols=118  Identities=20%  Similarity=0.252  Sum_probs=91.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh-----hh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE-----AR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-----~~   75 (122)
                      +|+|.+...........+.+|+.+++.++|+||+++++.+. .....+++|||+.+++|.+++..........     ..
T Consensus        37 ~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  115 (283)
T cd05090          37 VAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDG  115 (283)
T ss_pred             EEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccc
Confidence            46677765433334467889999999999999999999987 6778899999999999999986432211000     00


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       116 ~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~  159 (283)
T cd05090         116 TVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE  159 (283)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence            11234677788999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.84  E-value=1.6e-20  Score=121.50  Aligned_cols=118  Identities=24%  Similarity=0.387  Sum_probs=92.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH--------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--------   72 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~--------   72 (122)
                      +|+|.+.........+.+.+|+.+++.++||||+++++.+. ..+..++++||+.+++|.+++.........        
T Consensus        33 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  111 (290)
T cd05045          33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNR  111 (290)
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCCcEEEEEecCCCCHHHHHHhcCCcccccccccccc
Confidence            35666665533334567889999999999999999999988 667788999999999999998754321110        


Q ss_pred             ----hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 ----EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ........+.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       112 ~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~nill~~  162 (290)
T cd05045         112 NSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARNVLVAE  162 (290)
T ss_pred             ccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhheEEEcC
Confidence                01111235677888999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.84  E-value=2.3e-20  Score=120.85  Aligned_cols=118  Identities=20%  Similarity=0.296  Sum_probs=93.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh----h
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA----R   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~   75 (122)
                      +|+|.+...........+.+|+.+++++ +|+||+++++.+. ..+..++++||+++|+|..++...........    .
T Consensus        45 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  123 (293)
T cd05053          45 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR  123 (293)
T ss_pred             EEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc-CCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccc
Confidence            4677777553333456688999999999 8999999999998 66778999999999999999976433211111    1


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       124 ~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~~  167 (293)
T cd05053         124 PPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVTE  167 (293)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEcC
Confidence            12345778888999999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.84  E-value=1.3e-20  Score=123.86  Aligned_cols=106  Identities=19%  Similarity=0.259  Sum_probs=86.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++....  .....+.+..|..++..++|+ +|+.+++++. ..+..+++|||+.+|+|...+.....         
T Consensus        28 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~---------   97 (324)
T cd05587          28 YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGK---------   97 (324)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence            5888887642  233456778899999999765 5778888887 67789999999999999988875443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        98 ---~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~  136 (324)
T cd05587          98 ---FKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDA  136 (324)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcC
Confidence               334455889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=2.8e-20  Score=119.44  Aligned_cols=116  Identities=21%  Similarity=0.245  Sum_probs=92.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+..+........+.+|+.+++.++|+|++++++.+. .....++++||+++++|.+++.........  ......
T Consensus        39 ~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~--~~~~~~  115 (277)
T cd05032          39 VAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-TGQPTLVVMELMAKGDLKSYLRSRRPEAEN--NPGLGP  115 (277)
T ss_pred             EEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-CCCCcEEEEecCCCCCHHHHHHhcccchhh--ccCCCC
Confidence            47777765543344567889999999999999999999998 667889999999999999999764332211  011234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       116 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~  154 (277)
T cd05032         116 PTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAE  154 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcC
Confidence            566778899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.84  E-value=2.9e-20  Score=123.09  Aligned_cols=119  Identities=20%  Similarity=0.275  Sum_probs=91.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||||.++..........+.+|+.++..+ +|+||+.+++++.......++++||+.+|+|.+++.......         
T Consensus        40 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~  119 (343)
T cd05103          40 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDAR  119 (343)
T ss_pred             EEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccc
Confidence            5889887654344456788999999999 689999999988745667889999999999999987532100         


Q ss_pred             ------------HH----------------------------------hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCC
Q psy4991          71 ------------ER----------------------------------EARCLSQPYLSTSARSIVMQVVSALKYLNEIK  104 (122)
Q Consensus        71 ------------~~----------------------------------~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~  104 (122)
                                  ..                                  ........+.+..+..++.|++.|+.|||+.+
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  199 (343)
T cd05103         120 FRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK  199 (343)
T ss_pred             cccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                        00                                  00001123567788899999999999999999


Q ss_pred             CCeeeeCCCCCCccccc
Q psy4991         105 PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       105 ~~i~h~dlk~~nill~~  121 (122)
                        ++|+||||+||+++.
T Consensus       200 --i~H~dikp~Nil~~~  214 (343)
T cd05103         200 --CIHRDLAARNILLSE  214 (343)
T ss_pred             --eecCCCccCeEEEcC
Confidence              999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.84  E-value=2.4e-20  Score=119.51  Aligned_cols=111  Identities=19%  Similarity=0.245  Sum_probs=87.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+.+++.++|+||+++++.+. +....+++|||+++|+|.+++.......       ...
T Consensus        25 ~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~   96 (269)
T cd05087          25 VVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-EVTPYLLVMEFCPLGDLKGYLRSCRKAE-------LMT   96 (269)
T ss_pred             EEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCCcEEEEECCCCCcHHHHHHHhhhcc-------ccc
Confidence            36676665533334457888999999999999999999987 6677889999999999999987532210       112


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.++.|||+.+  ++|+|+||+||+++.
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~  135 (269)
T cd05087          97 PDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTA  135 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcC
Confidence            234455788999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.84  E-value=3.4e-20  Score=119.48  Aligned_cols=108  Identities=20%  Similarity=0.279  Sum_probs=85.9

Q ss_pred             CeeeeccCCC-C-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-N-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+.... . .........|++++++++||||+.+++.+. +....+++|||+.+++|...+.....          
T Consensus        21 ~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~~~~~~~----------   89 (277)
T cd05607          21 YACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-SKTHLCLVMSLMNGGDLKYHIYNVGE----------   89 (277)
T ss_pred             EEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhccc----------
Confidence            4677776431 1 112344567999999999999999999998 67889999999999999887754321          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        90 ~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~  130 (277)
T cd05607          90 RGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDD  130 (277)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcC
Confidence            23445566889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.84  E-value=9.1e-21  Score=125.88  Aligned_cols=102  Identities=26%  Similarity=0.392  Sum_probs=84.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+++++.++|+||+.+++.+. ..+.+++++||+.+++|....                .
T Consensus       102 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~----------------~  164 (353)
T PLN00034        102 YALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD-HNGEIQVLLEFMDGGSLEGTH----------------I  164 (353)
T ss_pred             EEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec-cCCeEEEEEecCCCCcccccc----------------c
Confidence            58888876544445677889999999999999999999998 777889999999999885321                1


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.|+.|||+.+  ++|+||||+|||++.
T Consensus       165 ~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  203 (353)
T PLN00034        165 ADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINS  203 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence            223445789999999999999999  999999999999975

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.84  E-value=4e-20  Score=119.60  Aligned_cols=116  Identities=22%  Similarity=0.283  Sum_probs=91.9

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH-hhhhcCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARCLSQP   80 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~   80 (122)
                      |+|.+... .....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+.+++|.+++...+..... ........
T Consensus        39 ~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~  116 (288)
T cd05093          39 AVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE  116 (288)
T ss_pred             EEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCC
Confidence            55655543 2234567889999999999999999999998 677889999999999999999765431111 11112235


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.++.|||+.+  ++|+|+||+||++++
T Consensus       117 l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~  155 (288)
T cd05093         117 LTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGE  155 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence            788888999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.84  E-value=1.4e-20  Score=123.68  Aligned_cols=106  Identities=29%  Similarity=0.451  Sum_probs=83.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++....  .......+..|.. +++.++|+||+.+++.+. ..+..+++|||+.+++|..++...+.+        
T Consensus        23 ~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~--------   93 (325)
T cd05602          23 YAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRERCF--------   93 (325)
T ss_pred             EEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-cCCeEEEEEeCCCCCcHHHHHHhcCCC--------
Confidence            5788876541  1222344455544 567789999999999998 778899999999999999988764433        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        94 ----~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~  131 (325)
T cd05602          94 ----LEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDS  131 (325)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECC
Confidence                33444789999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.84  E-value=1.4e-20  Score=124.03  Aligned_cols=107  Identities=23%  Similarity=0.296  Sum_probs=87.4

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+.  ......+.+.+|..++..++|++|+.+++++. +.+..+++|||+.+|+|.+++....           
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-~~~~~~lv~Ey~~gg~L~~~l~~~~-----------   96 (331)
T cd05624          29 YAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-DENYLYLVMDYYVGGDLLTLLSKFE-----------   96 (331)
T ss_pred             EEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHhc-----------
Confidence            578887653  12223455778899999999999999999998 7788999999999999999987532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|+|+.+  ++||||||+||+++.
T Consensus        97 ~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~  137 (331)
T cd05624          97 DRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDM  137 (331)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcC
Confidence            12344455889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.84  E-value=2.9e-20  Score=120.19  Aligned_cols=118  Identities=26%  Similarity=0.363  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA------   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~------   74 (122)
                      +|+|.+...........+.+|+.++++++|+|++++++++. .....++++||+++++|.+++...........      
T Consensus        38 ~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (288)
T cd05050          38 VAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS  116 (288)
T ss_pred             EEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccc
Confidence            47787775533334567889999999999999999999988 66778999999999999999975432111111      


Q ss_pred             ----hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 ----RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ......+.+..++.++.|++.|+.|+|+.+  ++|+|++|+||+++.
T Consensus       117 ~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~nil~~~  165 (288)
T cd05050         117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATRNCLVGE  165 (288)
T ss_pred             cccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHhheEecC
Confidence                011134677888999999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.84  E-value=3.6e-20  Score=120.93  Aligned_cols=106  Identities=28%  Similarity=0.409  Sum_probs=87.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..........+.+|+.+++.++|+||+.+++++. ..+..++++||+. ++|.+++...+.           .
T Consensus        34 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~-----------~  100 (309)
T cd07872          34 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-TDKSLTLVFEYLD-KDLKQYMDDCGN-----------I  100 (309)
T ss_pred             EEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-eCCeEEEEEeCCC-CCHHHHHHhcCC-----------C
Confidence            57888876544444567789999999999999999999998 6778899999998 688887764322           2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~  139 (309)
T cd07872         101 MSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINE  139 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            344556889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.84  E-value=3.6e-20  Score=117.99  Aligned_cols=105  Identities=28%  Similarity=0.459  Sum_probs=86.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|+++... .....+.+.+|+.+++.++|+||+.+++.+.  ....++++||+++++|.+++.....           
T Consensus        25 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~-----------   91 (257)
T cd05116          25 VAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQKNKH-----------   91 (257)
T ss_pred             EEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHHhcCC-----------
Confidence            4788876542 2234567889999999999999999999875  4567899999999999998875433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..+..++.|++.|+.|+|+.+  ++|+|+||+||++++
T Consensus        92 -~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~  130 (257)
T cd05116          92 -VTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVT  130 (257)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcC
Confidence             344555899999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.84  E-value=1.4e-20  Score=120.03  Aligned_cols=94  Identities=21%  Similarity=0.254  Sum_probs=80.7

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ..+.+..|+.+++.++|+|++.+++.+. .....+++|||+.+|+|.+++...+.           .+.+..+..++.|+
T Consensus        42 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~~qi  109 (258)
T cd05078          42 YSESFFEAASMMSQLSHKHLVLNYGVCV-CGDESIMVQEYVKFGSLDTYLKKNKN-----------LINISWKLEVAKQL  109 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheeeEEE-eCCCcEEEEecCCCCcHHHHHhcCCC-----------CCCHHHHHHHHHHH
Confidence            3467788999999999999999999998 56678899999999999999875432           33445568899999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|+.|||+.+  ++|+|+||+||+++.
T Consensus       110 ~~~l~~lH~~~--iiH~dlkp~nili~~  135 (258)
T cd05078         110 AWALHFLEDKG--LTHGNVCAKNVLLIR  135 (258)
T ss_pred             HHHHHHHHHCC--eecCCCccceEEEec
Confidence            99999999999  999999999999964

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.84  E-value=3.5e-20  Score=120.87  Aligned_cols=118  Identities=19%  Similarity=0.281  Sum_probs=92.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH----Hhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE----REAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~----~~~~   75 (122)
                      +|+|.+...........+.+|+.+++.+ +|+||+.+++.+. .....++++||+.+|+|.+++........    ....
T Consensus        53 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~  131 (307)
T cd05098          53 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ  131 (307)
T ss_pred             EEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence            4677776553334456788899999999 7999999999998 66788999999999999999976432110    0001


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       132 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~  175 (307)
T cd05098         132 VPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTE  175 (307)
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHHheEEcC
Confidence            12235677788999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.84  E-value=4.3e-20  Score=121.78  Aligned_cols=118  Identities=19%  Similarity=0.263  Sum_probs=92.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||+|.+.........+.+.+|+.+++++ +|+||+.+++.+. .....++++||+.+|+|.+++.......    .....
T Consensus        47 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  125 (334)
T cd05100          47 VAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK  125 (334)
T ss_pred             EEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc-cCCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence            4677776543344457788999999999 8999999999998 6677899999999999999997643211    01111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       126 ~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nill~~  169 (334)
T cd05100         126 LPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARNVLVTE  169 (334)
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcC
Confidence            22345667788899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.84  E-value=4.9e-20  Score=117.91  Aligned_cols=107  Identities=21%  Similarity=0.335  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+..|+++++.++|+|++++.+.+. ..+..+++|||+++++|..++....           ..
T Consensus        36 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~  103 (268)
T cd05063          36 VAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-KFKPAMIITEYMENGALDKYLRDHD-----------GE  103 (268)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-cCCCcEEEEEcCCCCCHHHHHHhcC-----------CC
Confidence            46777765544445677889999999999999999999998 6678899999999999999886532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       104 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~  142 (268)
T cd05063         104 FSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNS  142 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcC
Confidence            455566899999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0604|consensus

Probab=99.84  E-value=3.5e-21  Score=122.59  Aligned_cols=95  Identities=28%  Similarity=0.476  Sum_probs=80.4

Q ss_pred             hHHHHHHHHHHhhC-CCCCccceeeeee---eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991          15 PRHALREYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV   90 (122)
Q Consensus        15 ~~~~~~e~~~l~~~-~h~~i~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (122)
                      .++..+|+++--+. .|+|||+++++|.   .....+.+|||.|+||.|.+.+...+.          ..+.+++...++
T Consensus        98 s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~----------~afTErea~eI~  167 (400)
T KOG0604|consen   98 SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD----------QAFTEREASEIM  167 (400)
T ss_pred             CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc----------ccchHHHHHHHH
Confidence            46677899977766 7999999999995   233467899999999999999987654          445666669999


Q ss_pred             HHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .||+.++.|||+.+  |.|||+||+|+|.+.
T Consensus       168 ~qI~~Av~~lH~~n--IAHRDlKpENLLyt~  196 (400)
T KOG0604|consen  168 KQIGLAVRYLHSMN--IAHRDLKPENLLYTT  196 (400)
T ss_pred             HHHHHHHHHHHhcc--hhhccCChhheeeec
Confidence            99999999999999  999999999999864

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.84  E-value=2.7e-20  Score=120.54  Aligned_cols=106  Identities=32%  Similarity=0.477  Sum_probs=88.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.++...  .....+.+.+|++++++++|+||+.+++.+. ..+..++++||+++++|.+++.....          
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~----------   97 (290)
T cd05580          29 YALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-DDSNLYLVMEYVPGGELFSHLRKSGR----------   97 (290)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-cCCeEEEEEecCCCCCHHHHHHHcCC----------
Confidence            4778776542  2334567889999999999999999999998 77889999999999999999876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +++..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus        98 --l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~  136 (290)
T cd05580          98 --FPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDS  136 (290)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECC
Confidence              344555899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG4717|consensus

Probab=99.84  E-value=1.7e-20  Score=127.00  Aligned_cols=105  Identities=30%  Similarity=0.560  Sum_probs=90.4

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhc-cchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~   78 (122)
                      ||||++.+. .+.-...++..|++.++.++|||||++|.+.. ++..+|+++|.-.+|+|.+|+-.+ .++.+..+    
T Consensus        46 VAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La----  120 (864)
T KOG4717|consen   46 VAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLA----  120 (864)
T ss_pred             eEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-ccceEEEEEEecCCchHHHHHHhhhccccHHHH----
Confidence            799999876 34445677899999999999999999999998 777899999999999999998654 33444444    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                              ..|+.||+.++.|+|+..  ++||||||+|+.+-
T Consensus       121 --------~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFF  152 (864)
T KOG4717|consen  121 --------KKYFAQIVHAISYCHQLH--VVHRDLKPENVVFF  152 (864)
T ss_pred             --------HHHHHHHHHHHHHHhhhh--hhcccCCcceeEEe
Confidence                    899999999999999988  99999999999864

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.84  E-value=3.3e-20  Score=133.75  Aligned_cols=117  Identities=24%  Similarity=0.362  Sum_probs=91.5

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.....  +...+++.+|++++++++||||+++++.+. +.+..+++|||++|++|.+++....... .......
T Consensus        30 VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~-~l~e~~~  107 (932)
T PRK13184         30 VALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKE-SLSKELA  107 (932)
T ss_pred             EEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhcc-ccchhhh
Confidence            58898876532  234567899999999999999999999998 6778899999999999999887521110 0000011


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .......++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       108 ~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~  148 (932)
T PRK13184        108 EKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGL  148 (932)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcC
Confidence            33455677899999999999999999  999999999999974

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.84  E-value=4.9e-20  Score=117.05  Aligned_cols=115  Identities=26%  Similarity=0.362  Sum_probs=93.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.++........+.+.+|+..++.++|+|++.+++++. +....++++||+.+++|.+++.......   .......
T Consensus        26 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~  101 (262)
T cd00192          26 VAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-EEEPLYLVLEYMEGGDLLDYLRKSRPVF---PSPEKST  101 (262)
T ss_pred             EEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-CCCceEEEEEeccCCcHHHHHhhccccc---ccccccc
Confidence            47788776643334678889999999999999999999998 6788899999999999999987641100   0001234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       102 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~  140 (262)
T cd00192         102 LSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGE  140 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECC
Confidence            566777999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.84  E-value=2e-20  Score=122.94  Aligned_cols=105  Identities=27%  Similarity=0.344  Sum_probs=84.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHH---hhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIH---KALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l---~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|+++...  .....+.+.+|++++   +.++||||+++++++. ..+..+++|||+.+++|...+..          
T Consensus        27 ~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-~~~~~~lv~E~~~~~~L~~~~~~----------   95 (324)
T cd05589          27 YAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-TEDHVCFVMEYAAGGDLMMHIHT----------   95 (324)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-cCCEEEEEEcCCCCCcHHHHhhc----------
Confidence            5788887542  223345667777665   4567999999999998 77889999999999999877653          


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ..+.+..++.++.|++.|+.|||+.+  ++||||||+||++++
T Consensus        96 ---~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~  136 (324)
T cd05589          96 ---DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDT  136 (324)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECC
Confidence               23455566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.84  E-value=6.4e-20  Score=116.27  Aligned_cols=107  Identities=24%  Similarity=0.336  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|..++....           ..
T Consensus        22 ~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~   89 (250)
T cd05085          22 VAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-QRQPIYIVMELVPGGDFLSFLRKKK-----------DE   89 (250)
T ss_pred             EEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-cCCccEEEEECCCCCcHHHHHHhcC-----------CC
Confidence            47777766543444567889999999999999999999998 6677889999999999998876422           12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|+|+.+  ++|+|++|+||+++.
T Consensus        90 ~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~  128 (250)
T cd05085          90 LKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGE  128 (250)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcC
Confidence            445666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.8e-20  Score=123.35  Aligned_cols=106  Identities=24%  Similarity=0.301  Sum_probs=83.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|++....  ..........|..++...   +||+|+.+++.+. .....+++|||+.+|+|...+...+.+      
T Consensus        21 ~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~------   93 (330)
T cd05586          21 YAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-TDSDLYLVTDYMSGGELFWHLQKEGRF------   93 (330)
T ss_pred             EEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-cCCeEEEEEcCCCCChHHHHHHhcCCC------
Confidence            5788876531  122334455677776655   6999999999998 778899999999999998888754443      


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        94 ------~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~  131 (330)
T cd05586          94 ------SEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDA  131 (330)
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECC
Confidence                  44455899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.84  E-value=6.5e-20  Score=118.78  Aligned_cols=116  Identities=26%  Similarity=0.344  Sum_probs=90.2

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhhhc
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREARCL   77 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~   77 (122)
                      |+|.+... .....+.+.+|+.++++++|+||+.+++.+. .....+++|||+++++|.+++...+...    .......
T Consensus        39 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~  116 (291)
T cd05094          39 AVKALKDP-TLAARKDFQREAELLTNLQHEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA  116 (291)
T ss_pred             EEEecCCc-cHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccC
Confidence            45555433 1223467889999999999999999999998 6677899999999999999997644311    0111112


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..++.++.|++.++.|||+.+  ++|+||||+||+++.
T Consensus       117 ~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~  158 (291)
T cd05094         117 KGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA  158 (291)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence            234677888999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.84  E-value=5.8e-20  Score=120.24  Aligned_cols=118  Identities=19%  Similarity=0.278  Sum_probs=92.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH----hhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER----EAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~   75 (122)
                      +|+|.++..........+.+|+.+++++ +|+||+++++++. .....++++||+.+|+|.+++.........    ...
T Consensus        47 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~  125 (314)
T cd05099          47 VAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITK  125 (314)
T ss_pred             EEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccC
Confidence            4677776553334456788999999999 6999999999997 667789999999999999999764321110    011


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|+|+.+  ++|+||||+||+++.
T Consensus       126 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nill~~  169 (314)
T cd05099         126 VPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVLVTE  169 (314)
T ss_pred             CcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccceeEEEcC
Confidence            11234677788999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.83  E-value=4.9e-20  Score=119.70  Aligned_cols=117  Identities=20%  Similarity=0.261  Sum_probs=91.0

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh----hhh
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE----ARC   76 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----~~~   76 (122)
                      |+|.++........+.+.+|+.++.++ +||||+.+++.+. ..+..++++||+++++|.+++..........    ...
T Consensus        33 ~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  111 (297)
T cd05089          33 AIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG  111 (297)
T ss_pred             EEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-cCCcceEEEEecCCCcHHHHHHhccccccccccccccC
Confidence            566665433333456788999999999 7999999999987 6677889999999999999997643221110    001


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       112 ~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~  154 (297)
T cd05089         112 TASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGE  154 (297)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECC
Confidence            1234777888999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=7.7e-20  Score=116.66  Aligned_cols=106  Identities=26%  Similarity=0.297  Sum_probs=88.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..  ....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+.+++|.+++....          ...
T Consensus        33 v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------~~~   99 (261)
T cd05068          33 VAVKTLKPG--TMDPKDFLAEAQIMKKLRHPKLIQLYAVCT-LEEPIYIVTELMKYGSLLEYLQGGA----------GRA   99 (261)
T ss_pred             EEEEeeCCC--cccHHHHHHHHHHHHHCCCCCccceeEEEe-cCCCeeeeeecccCCcHHHHHhccC----------CCC
Confidence            577877654  223567889999999999999999999887 6677899999999999999887532          124


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.+||+.+  ++|+||||+||++++
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~  138 (261)
T cd05068         100 LKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGE  138 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcC
Confidence            556667999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.83  E-value=1e-19  Score=115.68  Aligned_cols=108  Identities=20%  Similarity=0.340  Sum_probs=89.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+.+++.++|+|++.+.+.+. +.+.+++++||+++++|.+++.....          ..
T Consensus        28 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~~   96 (255)
T cd08219          28 YAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-ADGHLYIVMEYCDGGDLMQKIKLQRG----------KL   96 (255)
T ss_pred             EEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-ECCEEEEEEeeCCCCcHHHHHHhccC----------CC
Confidence            46787765433445677888999999999999999999998 77889999999999999888864321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        97 ~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~  135 (255)
T cd08219          97 FPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQ  135 (255)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECC
Confidence            445566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.83  E-value=2.5e-20  Score=122.51  Aligned_cols=106  Identities=20%  Similarity=0.271  Sum_probs=85.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++....  .....+.+..|..++..+. |++|+.+++++. +.+.++++|||+++|+|..++...+.         
T Consensus        28 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~~~~~---------   97 (323)
T cd05615          28 YAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ-TVDRLYFVMEYVNGGDLMYHIQQVGK---------   97 (323)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe-cCCEEEEEEcCCCCCcHHHHHHHcCC---------
Confidence            5889887542  2334466778899888885 567888888887 67789999999999999988875433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||++++
T Consensus        98 ---l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~  136 (323)
T cd05615          98 ---FKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDS  136 (323)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence               444555999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=3.1e-20  Score=131.91  Aligned_cols=106  Identities=26%  Similarity=0.303  Sum_probs=88.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+..|+.++..++|+||+.+++.+. .....++||||+.+++|..++...+.+         
T Consensus        32 vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lVmEy~~g~~L~~li~~~~~l---------  101 (669)
T cd05610          32 YAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-SANNVYLVMEYLIGGDVKSLLHIYGYF---------  101 (669)
T ss_pred             EEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-ECCEEEEEEeCCCCCCHHHHHHhcCCC---------
Confidence            5889887542  2233467888999999999999999999887 677899999999999999998754333         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..++.++.|++.||.|||..+  ++|+||||+|||++.
T Consensus       102 ---~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~  139 (669)
T cd05610         102 ---DEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISN  139 (669)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcC
Confidence               33445899999999999999998  999999999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0658|consensus

Probab=99.83  E-value=3.6e-21  Score=124.50  Aligned_cols=106  Identities=25%  Similarity=0.320  Sum_probs=80.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||...++..-     --+|.++|+.++||||+++..+|..+.+    ...+||||++ .+|.+.++....        
T Consensus        52 vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~--------  117 (364)
T KOG0658|consen   52 VAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTR--------  117 (364)
T ss_pred             eEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhh--------
Confidence            577776655221     2368999999999999999998852322    3557999998 899999885211        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      ....++.-.+..++.|+.+|+.|||+.+  |.||||||+|+|+|.+
T Consensus       118 ~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~  161 (364)
T KOG0658|consen  118 ANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPD  161 (364)
T ss_pred             cCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCC
Confidence            1123344455899999999999999999  9999999999999853

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.83  E-value=8.8e-20  Score=116.17  Aligned_cols=105  Identities=24%  Similarity=0.291  Sum_probs=87.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ......+.+|+.+++.++|+||+++++.+. ..+..++++||+++++|.+++.....           .
T Consensus        31 ~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~   96 (256)
T cd05059          31 VAIKMIREG--AMSEDDFIEEAKVMMKLSHPNLVQLYGVCT-KQRPIFIVTEYMANGCLLNYLRERKG-----------K   96 (256)
T ss_pred             EEEEEeccC--CCCHHHHHHHHHHHHhCCCCCEEEEEEEEc-CCCceEEEEecCCCCCHHHHHHhccc-----------C
Confidence            477877654  223457888999999999999999999987 66788999999999999998875321           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus        97 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~  135 (256)
T cd05059          97 LGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGE  135 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECC
Confidence            445566899999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.83  E-value=9.5e-20  Score=116.18  Aligned_cols=106  Identities=24%  Similarity=0.324  Sum_probs=88.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...  ....+.+.+|+.++++++|+|++.+++.+. ..+..++++||+++++|.+++....          ...
T Consensus        33 v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~   99 (261)
T cd05072          33 VAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVT-KEEPIYIITEYMAKGSLLDFLKSDE----------GGK   99 (261)
T ss_pred             EEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCCcEEEEecCCCCcHHHHHHHhc----------CCC
Confidence            467776644  224578899999999999999999999987 6777899999999999999886532          123


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       100 ~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~  138 (261)
T cd05072         100 VLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSE  138 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecC
Confidence            455566889999999999999998  999999999999975

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=7.4e-20  Score=116.52  Aligned_cols=105  Identities=25%  Similarity=0.342  Sum_probs=87.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+.+++.+.|+|++.+++.+.  .+..++++||+.+++|.+++.....            
T Consensus        26 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~------------   91 (257)
T cd05060          26 VAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAPLGPLLKYLKKRRE------------   91 (257)
T ss_pred             EEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEEEEEeCCCCcHHHHHHhCCC------------
Confidence            46787776643345567889999999999999999999875  4457899999999999999976433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|||..+  ++|+||||+||+++.
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~  130 (257)
T cd05060          92 IPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVN  130 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcC
Confidence            345556999999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.83  E-value=7.3e-20  Score=117.98  Aligned_cols=118  Identities=20%  Similarity=0.361  Sum_probs=92.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH----Hhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE----REARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~----~~~~~   76 (122)
                      ||+|.++........+.+.+|+.++..++|+||+.+++.+. .....++++||+.+++|..++........    .....
T Consensus        38 vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~  116 (283)
T cd05091          38 VAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKT  116 (283)
T ss_pred             EEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccc
Confidence            57888876543344567889999999999999999999998 66778899999999999999864322111    00111


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|+|+.+  ++|+||||+||++++
T Consensus       117 ~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~  159 (283)
T cd05091         117 VKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD  159 (283)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence            1234677788999999999999999999  999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.83  E-value=8.8e-20  Score=117.66  Aligned_cols=107  Identities=24%  Similarity=0.287  Sum_probs=86.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+... .....+.+.+|++++++++|+|++.+.+.+. .+....++++||+++++|.+++....           .
T Consensus        36 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~  103 (284)
T cd05081          36 VAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR-----------E  103 (284)
T ss_pred             EEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcC-----------c
Confidence            467776644 2334567889999999999999999999874 23456889999999999999986532           1


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       104 ~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~  143 (284)
T cd05081         104 RLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVES  143 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECC
Confidence            2445566899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4721|consensus

Probab=99.83  E-value=6.4e-21  Score=130.12  Aligned_cols=87  Identities=22%  Similarity=0.427  Sum_probs=77.3

Q ss_pred             HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY   99 (122)
Q Consensus        20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   99 (122)
                      .+|..|++++|+||+.+.|+|+ ...-+||+||||+.|.|...|+....            +.+..+..|..+|+.||.|
T Consensus       161 TdIKHLRkLkH~NII~FkGVCt-qsPcyCIiMEfCa~GqL~~VLka~~~------------itp~llv~Wsk~IA~GM~Y  227 (904)
T KOG4721|consen  161 TDIKHLRKLKHPNIITFKGVCT-QSPCYCIIMEFCAQGQLYEVLKAGRP------------ITPSLLVDWSKGIAGGMNY  227 (904)
T ss_pred             hhHHHHHhccCcceeeEeeeec-CCceeEEeeeccccccHHHHHhccCc------------cCHHHHHHHHHHhhhhhHH
Confidence            4688899999999999999998 66778999999999999999997544            4444558999999999999


Q ss_pred             HHcCCCCeeeeCCCCCCccccc
Q psy4991         100 LNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       100 lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ||...  |+|||||.-|||++.
T Consensus       228 LH~hK--IIHRDLKSPNiLIs~  247 (904)
T KOG4721|consen  228 LHLHK--IIHRDLKSPNILISY  247 (904)
T ss_pred             HHHhh--HhhhccCCCceEeec
Confidence            99999  999999999999974

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.83  E-value=3.4e-20  Score=122.25  Aligned_cols=107  Identities=22%  Similarity=0.303  Sum_probs=87.0

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++.+.  ......+.+.+|+.++..++|++|+.+++++. +....+++|||+.+|+|.+++....           
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~-----------   96 (332)
T cd05623          29 FAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-DENNLYLVMDYYVGGDLLTLLSKFE-----------   96 (332)
T ss_pred             EEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-cCCEEEEEEeccCCCcHHHHHHHhc-----------
Confidence            477777543  12223455778999999999999999999998 7788999999999999999987532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        97 ~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~  137 (332)
T cd05623          97 DRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDM  137 (332)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECC
Confidence            12444555889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.83  E-value=4.3e-20  Score=121.33  Aligned_cols=106  Identities=19%  Similarity=0.255  Sum_probs=85.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++.+..  .....+....|..++... .|++|+.+++++. +.+..+++|||+++|+|...+...+.         
T Consensus        28 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~E~~~~g~L~~~~~~~~~---------   97 (323)
T cd05616          28 YAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYQIQQVGR---------   97 (323)
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-cCCEEEEEEcCCCCCCHHHHHHHcCC---------
Confidence            5788887642  223345567788888877 6889999999887 67889999999999999988875443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus        98 ---~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~  136 (323)
T cd05616          98 ---FKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDS  136 (323)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECC
Confidence               344455899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.83  E-value=8.6e-20  Score=116.37  Aligned_cols=108  Identities=23%  Similarity=0.256  Sum_probs=86.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+.+++.++|||++.+++.+....+..++++||+.+++|.+++.....           .
T Consensus        26 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----------~   94 (262)
T cd05058          26 CAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH-----------N   94 (262)
T ss_pred             EEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCC-----------C
Confidence            46777654433334577889999999999999999999876455667899999999999999875321           1


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        95 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~  133 (262)
T cd05058          95 PTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDE  133 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcC
Confidence            233445788999999999999998  999999999999975

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.83  E-value=8.8e-20  Score=116.67  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|++.... ......+.+|+.++++++|+|++.+++.+. .....++++||+++++|.+++...+.            
T Consensus        37 ~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~------------  102 (267)
T cd06646          37 AAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYL-SREKLWICMEYCGGGSLQDIYHVTGP------------  102 (267)
T ss_pred             EEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCC------------
Confidence            4678776442 223456778999999999999999999998 67788999999999999988865433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~  141 (267)
T cd06646         103 LSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTD  141 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence            344455899999999999999999  999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.83  E-value=5e-20  Score=120.05  Aligned_cols=106  Identities=27%  Similarity=0.388  Sum_probs=87.9

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.....  ....+.+.+|+++++.++|+||+.+++.+. ..+..++++||+++++|..++...+.          
T Consensus        29 v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~----------   97 (305)
T cd05609          29 FAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-TKRHLCMVMEYVEGGDCATLLKNIGA----------   97 (305)
T ss_pred             EEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHHHcCC----------
Confidence            47777765521  223467788999999999999999999998 67788999999999999999876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +++..+..++.|++.|+.|+|+.+  ++|+|++|+||+++.
T Consensus        98 --~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~  136 (305)
T cd05609          98 --LPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITS  136 (305)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECC
Confidence              344455888999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.83  E-value=1e-19  Score=118.38  Aligned_cols=106  Identities=29%  Similarity=0.426  Sum_probs=87.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+||+.+++++. ..+..++++||+. ++|.+++....           ..
T Consensus        34 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~-----------~~  100 (301)
T cd07873          34 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLD-KDLKQYLDDCG-----------NS  100 (301)
T ss_pred             EEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-cCCeEEEEEeccc-cCHHHHHHhcC-----------CC
Confidence            57888765544444567789999999999999999999998 7788999999997 68888876432           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~  139 (301)
T cd07873         101 INMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINE  139 (301)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECC
Confidence            445566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.4e-19  Score=116.53  Aligned_cols=106  Identities=22%  Similarity=0.280  Sum_probs=87.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+.+++.++|+|++++++.+. + ...++++||+.+|+|.+++.....           .
T Consensus        39 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~-~~~~~v~e~~~~g~L~~~l~~~~~-----------~  105 (279)
T cd05057          39 VAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-S-SQVQLITQLMPLGCLLDYVRNHKD-----------N  105 (279)
T ss_pred             EEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-c-CceEEEEecCCCCcHHHHHHhccC-----------C
Confidence            36676665544344567889999999999999999999997 4 678899999999999998875321           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~  144 (279)
T cd05057         106 IGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKT  144 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcC
Confidence            455666999999999999999998  999999999999964

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.83  E-value=1.1e-19  Score=120.21  Aligned_cols=119  Identities=22%  Similarity=0.308  Sum_probs=92.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||+|.++........+.+..|+.+++++ +|+||+.+++++......+++++||+.+++|.+++.......         
T Consensus        40 va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~  119 (337)
T cd05054          40 VAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTR  119 (337)
T ss_pred             eeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence            5788777543333446678899999999 899999999998756677889999999999999986532100         


Q ss_pred             ----------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeee
Q psy4991          71 ----------------------------------------EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHY  110 (122)
Q Consensus        71 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~  110 (122)
                                                              .........++.+..+..++.|++.|+.|||+.+  ++||
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHr  197 (337)
T cd05054         120 KREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHR  197 (337)
T ss_pred             ccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecC
Confidence                                                    0000011235778889999999999999999999  9999


Q ss_pred             CCCCCCccccc
Q psy4991         111 DLKPGKPLFLF  121 (122)
Q Consensus       111 dlk~~nill~~  121 (122)
                      ||||+||+++.
T Consensus       198 Dikp~Nill~~  208 (337)
T cd05054         198 DLAARNILLSE  208 (337)
T ss_pred             CCCcceEEEeC
Confidence            99999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.83  E-value=1.1e-19  Score=115.36  Aligned_cols=108  Identities=22%  Similarity=0.360  Sum_probs=89.7

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+... ......+.+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|..++....          ..
T Consensus        28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------~~   96 (256)
T cd08529          28 YAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-DKGKLNIVMEYAENGDLHKLLKMQR----------GR   96 (256)
T ss_pred             EEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-cCCEEEEEEEeCCCCcHHHHHHHhc----------CC
Confidence            466766543 23445677889999999999999999999998 6778999999999999999887531          12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~  136 (256)
T cd08529          97 PLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDA  136 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeC
Confidence            4556667899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.83  E-value=1.2e-19  Score=116.92  Aligned_cols=116  Identities=22%  Similarity=0.314  Sum_probs=91.2

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---HhhhhcC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---REARCLS   78 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---~~~~~~~   78 (122)
                      |+|.+... .....+.+.+|+++++.++|+||+.+++.+. .....++++||+++++|.+++........   .......
T Consensus        39 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~  116 (280)
T cd05092          39 AVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAP  116 (280)
T ss_pred             EEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCc
Confidence            45555533 2334567889999999999999999999988 67778999999999999999976543111   1111112


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       117 ~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~  157 (280)
T cd05092         117 GQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQ  157 (280)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcC
Confidence            34677888999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0694|consensus

Probab=99.83  E-value=1.2e-20  Score=130.10  Aligned_cols=105  Identities=28%  Similarity=0.362  Sum_probs=89.7

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|||+++++  ...+..+..+.|.+++... +||.+++++.+|+ +.+.+++||||+.||++..... .+.+++.     
T Consensus       396 yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ-T~~~l~fvmey~~Ggdm~~~~~-~~~F~e~-----  468 (694)
T KOG0694|consen  396 YAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQ-TKEHLFFVMEYVAGGDLMHHIH-TDVFSEP-----  468 (694)
T ss_pred             EEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccc-cCCeEEEEEEecCCCcEEEEEe-cccccHH-----
Confidence            599999998  3566789999999999888 6999999999999 8899999999999999544332 2334444     


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ....|+.+++.|+.|||+++  |++||||.+|||||.
T Consensus       469 -------rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~  503 (694)
T KOG0694|consen  469 -------RARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDT  503 (694)
T ss_pred             -------HHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcc
Confidence                   44899999999999999999  999999999999985

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=5.7e-20  Score=123.69  Aligned_cols=90  Identities=26%  Similarity=0.415  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      +.+.+|+++++.++||||+++++++. .....++++|++. ++|..++.....            +++..++.++.|++.
T Consensus       128 ~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~------------l~~~~~~~i~~qi~~  193 (391)
T PHA03212        128 GGTATEAHILRAINHPSIIQLKGTFT-YNKFTCLILPRYK-TDLYCYLAAKRN------------IAICDILAIERSVLR  193 (391)
T ss_pred             hhhHHHHHHHHhCCCCCCCCEeEEEE-ECCeeEEEEecCC-CCHHHHHHhcCC------------CCHHHHHHHHHHHHH
Confidence            45788999999999999999999998 6678889999996 788887765433            344555899999999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      |+.|||+.+  ++||||||+||+++.
T Consensus       194 aL~ylH~~~--IvHrDiKP~NIll~~  217 (391)
T PHA03212        194 AIQYLHENR--IIHRDIKAENIFINH  217 (391)
T ss_pred             HHHHHHhCC--cccCCCChHhEEEcC
Confidence            999999999  999999999999974

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.83  E-value=1e-19  Score=115.78  Aligned_cols=107  Identities=22%  Similarity=0.309  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.++++++|+||+.+++.+. . ...++++||+++++|.+.+.....          ..
T Consensus        26 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~-~~~~~v~e~~~~~~L~~~l~~~~~----------~~   93 (257)
T cd05040          26 VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-T-HPLMMVTELAPLGSLLDRLRKDAL----------GH   93 (257)
T ss_pred             EEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-C-CeEEEEEEecCCCcHHHHHHhccc----------cc
Confidence            47787776643345678889999999999999999999998 4 788899999999999998876421          24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        94 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~  132 (257)
T cd05040          94 FLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLAS  132 (257)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEec
Confidence            556667999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1e-19  Score=115.80  Aligned_cols=106  Identities=24%  Similarity=0.323  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.....  ..+++.+|+.+++.++|+|++.+++.+. +....++++||+.+++|.+++.....          ..
T Consensus        32 v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~----------~~   98 (256)
T cd05039          32 VAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVL-QGNPLYIVTEYMAKGSLVDYLRSRGR----------AV   98 (256)
T ss_pred             EEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEc-CCCCeEEEEEecCCCcHHHHHHhcCC----------CC
Confidence            57888776532  4577899999999999999999999998 57788999999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~  137 (256)
T cd05039          99 ITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSE  137 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeC
Confidence            556677999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.83  E-value=5e-20  Score=117.86  Aligned_cols=113  Identities=22%  Similarity=0.274  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++.......     .....
T Consensus        29 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~-----~~~~~  102 (269)
T cd05044          29 VAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-LNEPQYIIMELMEGGDLLSYLRDARVER-----FGPPL  102 (269)
T ss_pred             ehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-CCCCeEEEEeccCCCcHHHHHHHhhhcc-----cCCcc
Confidence            35666655433345667889999999999999999999987 6677899999999999999987532110     01223


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~  141 (269)
T cd05044         103 LTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSE  141 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEec
Confidence            566777899999999999999999  999999999999874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.83  E-value=1e-19  Score=116.40  Aligned_cols=105  Identities=15%  Similarity=0.208  Sum_probs=87.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.++... ......+.+|+.+++.++|+|++.+++.+. ..+..++++||+++++|.+++...+.            
T Consensus        37 ~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~------------  102 (267)
T cd06645          37 AAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-RRDKLWICMEFCGGGSLQDIYHVTGP------------  102 (267)
T ss_pred             EEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-eCCEEEEEEeccCCCcHHHHHHhcCC------------
Confidence            4777776542 223456778999999999999999999998 67888999999999999998876443            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.+++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       103 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~  141 (267)
T cd06645         103 LSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTD  141 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            344555999999999999999999  999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.83  E-value=1.2e-19  Score=116.21  Aligned_cols=106  Identities=25%  Similarity=0.314  Sum_probs=87.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|...........+.+.+|+.++++++|+|++.+++.+. + ...++++||+++++|.+++....           ..
T Consensus        37 v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~-~~~~lv~e~~~~~~L~~~l~~~~-----------~~  103 (270)
T cd05056          37 VAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-E-NPVWIVMELAPLGELRSYLQVNK-----------YS  103 (270)
T ss_pred             eEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-C-CCcEEEEEcCCCCcHHHHHHhCC-----------CC
Confidence            46776665543445678899999999999999999999886 3 44679999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.+++.|+.|+|+.+  ++|+||||+||+++.
T Consensus       104 ~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~  142 (270)
T cd05056         104 LDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSS  142 (270)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEec
Confidence            455666899999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.82  E-value=1.5e-19  Score=115.27  Aligned_cols=107  Identities=22%  Similarity=0.262  Sum_probs=89.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. +....++++||+++++|.+++.....          ..
T Consensus        33 ~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~  100 (261)
T cd05148          33 VAIKILKSDD-LLKQQDFQKEVQALKRLRHKHLISLFAVCS-VGEPVYIITELMEKGSLLAFLRSPEG----------QV  100 (261)
T ss_pred             EEEEeccccc-hhhHHHHHHHHHHHhcCCCcchhheeeeEe-cCCCeEEEEeecccCCHHHHHhcCCC----------CC
Confidence            4677776552 224567889999999999999999999988 67788999999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       101 ~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~  139 (261)
T cd05148         101 LPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGE  139 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcC
Confidence            455666899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.82  E-value=1.6e-19  Score=114.76  Aligned_cols=108  Identities=26%  Similarity=0.369  Sum_probs=89.1

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +++|.+... .+......+.+|+.++++++|+||+.+++++. +.+..++++||+++++|.+++....          ..
T Consensus        28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~~~~~~----------~~   96 (256)
T cd08221          28 VVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-DDNTLLIEMEYANGGTLYDKIVRQK----------GQ   96 (256)
T ss_pred             EEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-cCCeEEEEEEecCCCcHHHHHHhcc----------cc
Confidence            356766543 23445567889999999999999999999998 6788899999999999999887531          12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.++..++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~  136 (256)
T cd08221          97 LFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTK  136 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeC
Confidence            3455666899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.82  E-value=7.7e-20  Score=116.86  Aligned_cols=106  Identities=21%  Similarity=0.315  Sum_probs=88.0

Q ss_pred             CeeeeccCCCC-----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN-----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+.....     ....+.+.+|+.++++++|+|++++++.+. +.+..++++||+.+++|.+++...+.       
T Consensus        28 ~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~-------   99 (268)
T cd06630          28 MAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-EDSHFNLFVEWMAGGSVSHLLSKYGA-------   99 (268)
T ss_pred             EEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-cCCeEEEEEeccCCCcHHHHHHHhCC-------
Confidence            47787764421     113467889999999999999999999998 77788999999999999998875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       100 -----~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~  138 (268)
T cd06630         100 -----FKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDS  138 (268)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence                 345556899999999999999999  999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=9.9e-20  Score=116.09  Aligned_cols=106  Identities=22%  Similarity=0.311  Sum_probs=87.2

Q ss_pred             CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      +|+|.+.....    ....+.+.+|+.++++++|+||+.+++.+. .....++++||+++++|.+.+.....+       
T Consensus        30 ~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~-------  101 (263)
T cd06625          30 LAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-DDETLSIFMEYMPGGSVKDQLKAYGAL-------  101 (263)
T ss_pred             EEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-cCCeEEEEEEECCCCcHHHHHHHhCCC-------
Confidence            46777764421    112356788999999999999999999998 667899999999999999988764433       


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.....++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       102 -----~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~  139 (263)
T cd06625         102 -----TETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDS  139 (263)
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence                 34445889999999999999999  999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG1151|consensus

Probab=99.82  E-value=6.5e-20  Score=122.53  Aligned_cols=109  Identities=65%  Similarity=1.140  Sum_probs=95.6

Q ss_pred             CeeeeccCC--C----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTN--L----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~--~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+..-+  |    ++......++|.++-+.++||.||++|++|.-+...+|-|+|||+|.+|..+++.++...+..+
T Consensus       491 vAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEA  570 (775)
T KOG1151|consen  491 VAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEA  570 (775)
T ss_pred             eeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHH
Confidence            688887643  2    1224577889999999999999999999998788899999999999999999999877777777


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                  ..++.||+.++.||....+||+|.||||.|||+..
T Consensus       571 ------------RSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~  605 (775)
T KOG1151|consen  571 ------------RSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN  605 (775)
T ss_pred             ------------HHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence                        89999999999999998899999999999999863

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=1.4e-19  Score=115.75  Aligned_cols=110  Identities=25%  Similarity=0.385  Sum_probs=88.9

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.++..  ........+.+|+.+++.++|||++++++.+. ..+..++++||+.+++|..++.....        ..
T Consensus        30 ~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~  100 (267)
T cd08228          30 VALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-EDNELNIVLELADAGDLSQMIKYFKK--------QK  100 (267)
T ss_pred             EEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-ECCeEEEEEEecCCCcHHHHHHHhhh--------cc
Confidence            477876643  22334567889999999999999999999988 66788899999999999988864211        11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+++..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~  141 (267)
T cd08228         101 RLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITA  141 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcC
Confidence            23556677899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2.1e-19  Score=114.49  Aligned_cols=106  Identities=21%  Similarity=0.334  Sum_probs=88.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+..... ...+.+.+|+.++++++|+|++.+++.+. +....++++||+.+++|..++....           ..
T Consensus        31 ~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~l~~e~~~~~~l~~~~~~~~-----------~~   97 (262)
T cd06613          31 VAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYL-RRDKLWIVMEYCGGGSLQDIYQVTR-----------GP   97 (262)
T ss_pred             EEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhhc-----------cC
Confidence            36677665422 24577889999999999999999999988 6778999999999999998887531           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        98 l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~  136 (262)
T cd06613          98 LSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTE  136 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECC
Confidence            445566999999999999999999  999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.82  E-value=1.9e-19  Score=114.23  Aligned_cols=108  Identities=29%  Similarity=0.427  Sum_probs=90.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+..|+.+++.++|+|++.+++.+. +.+..++++||+++++|.+++.....          ..
T Consensus        31 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~i~e~~~~~~l~~~~~~~~~----------~~   99 (258)
T smart00219       31 VAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-EEEPLMIVMEYMEGGDLLDYLRKNRP----------KE   99 (258)
T ss_pred             EEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-CCCeeEEEEeccCCCCHHHHHHhhhh----------cc
Confidence            57888876643335678889999999999999999999998 66788999999999999998875332          11


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.+||+.+  ++|+|++|+||+++.
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~  138 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGE  138 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEcc
Confidence            556666999999999999999999  999999999999975

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.82  E-value=1.6e-19  Score=116.23  Aligned_cols=115  Identities=17%  Similarity=0.197  Sum_probs=92.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.++|+|++++++++.......+++++|+.+++|..++........    .....
T Consensus        38 v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~----~~~~~  113 (280)
T cd05043          38 VFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEA----NNPQA  113 (280)
T ss_pred             EEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhcccccc----ccccC
Confidence            46777775544445677889999999999999999999887456778899999999999999876422110    01245


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       114 l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~  152 (280)
T cd05043         114 LSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDE  152 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcC
Confidence            677788999999999999999999  999999999999965

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.82  E-value=1.6e-19  Score=116.86  Aligned_cols=108  Identities=23%  Similarity=0.271  Sum_probs=87.6

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+.....  ......+.+|+.++++++|++++.+++.+. +.+..++++||+.+++|..++...+.          
T Consensus        28 ~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~----------   96 (285)
T cd05630          28 YACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGE----------   96 (285)
T ss_pred             EEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-cCCEEEEEEEecCCCcHHHHHHHhcc----------
Confidence            57787765421  122345678999999999999999999998 66789999999999999888864321          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus        97 ~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~  137 (285)
T cd05630          97 AGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDD  137 (285)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECC
Confidence            23555666899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.82  E-value=1.4e-19  Score=116.60  Aligned_cols=106  Identities=27%  Similarity=0.415  Sum_probs=86.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .....+.+.+|+.++++++|+|++.+++.+. .....++++||++++.+..+.....            
T Consensus        29 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~------------   95 (286)
T cd07847          29 VAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-RKRKLHLVFEYCDHTVLNELEKNPR------------   95 (286)
T ss_pred             EEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-eCCEEEEEEeccCccHHHHHHhCCC------------
Confidence            4778776542 2233456789999999999999999999998 6778899999999877776654322            


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus        96 ~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~  135 (286)
T cd07847          96 GVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITK  135 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcC
Confidence            3455666999999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0667|consensus

Probab=99.82  E-value=4.9e-20  Score=126.23  Aligned_cols=105  Identities=30%  Similarity=0.445  Sum_probs=90.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CC-----CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HP-----RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~-----~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++..  .........|+.+|..++ |.     |+|+++++|. -.+.+|||+|.+. .+|.++++.+..      
T Consensus       214 VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~HlciVfELL~-~NLYellK~n~f------  283 (586)
T KOG0667|consen  214 VAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY-FRNHLCIVFELLS-TNLYELLKNNKF------  283 (586)
T ss_pred             EEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-cccceeeeehhhh-hhHHHHHHhcCC------
Confidence            799999977  456677788999999995 43     8999999998 7899999999997 899999997643      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..++...+..++.|++.+|.+||+.+  |+|+|||||||||..
T Consensus       284 ----~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~  324 (586)
T KOG0667|consen  284 ----RGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKD  324 (586)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeecc
Confidence                34566677999999999999999999  999999999999863

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.82  E-value=7.7e-20  Score=122.18  Aligned_cols=105  Identities=24%  Similarity=0.391  Sum_probs=85.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-----eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... .......+.+|+.+++.++|+||+.+++++. ...     ..++++||+. ++|...+....       
T Consensus        28 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-------   98 (372)
T cd07853          28 VALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQ-PPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ-------   98 (372)
T ss_pred             EEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheec-CCCccccceEEEEeeccc-cCHHHHHhcCC-------
Confidence            5788876542 2234467889999999999999999999987 333     6889999997 68877775433       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        99 -----~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~  138 (372)
T cd07853          99 -----PLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNS  138 (372)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECC
Confidence                 3445556899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.82  E-value=4e-19  Score=113.08  Aligned_cols=106  Identities=21%  Similarity=0.276  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|..+..   ...+.+.+|+.++++++|+|++.+++.+.......++++||+++++|.+++.....          ..
T Consensus        32 ~~~k~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~   98 (256)
T cd05082          32 VAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SV   98 (256)
T ss_pred             EEEEEeCCC---chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC----------CC
Confidence            466766533   23467889999999999999999999876466678899999999999998875322          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        99 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~  137 (256)
T cd05082          99 LGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSE  137 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcC
Confidence            455666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.82  E-value=2.8e-19  Score=114.12  Aligned_cols=110  Identities=25%  Similarity=0.394  Sum_probs=90.2

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.++..  ......+.+.+|+.++++++|++++.+++.+. ..+..++++||+++++|..++.....        ..
T Consensus        30 ~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~  100 (267)
T cd08224          30 VALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-ENNELNIVLELADAGDLSRMIKHFKK--------QK  100 (267)
T ss_pred             EEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-cCCeEEEEEecCCCCCHHHHHHHhcc--------cC
Confidence            477877643  22334677889999999999999999999998 66788999999999999998865311        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.+++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       101 ~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~  141 (267)
T cd08224         101 RLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITA  141 (267)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECC
Confidence            34566777999999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.5e-19  Score=116.33  Aligned_cols=106  Identities=28%  Similarity=0.469  Sum_probs=88.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|..... .....+.+.+|+.++++++|+|++++++.+. .....++++||+.+++|..++...+           ..
T Consensus        33 ~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~   99 (280)
T cd06611          33 AAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELE-----------RG   99 (280)
T ss_pred             EEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhc-----------CC
Confidence            467776544 2234567889999999999999999999998 6778899999999999999886532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       100 l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~  138 (280)
T cd06611         100 LTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTL  138 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECC
Confidence            455666999999999999999999  999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.82  E-value=1.9e-19  Score=115.89  Aligned_cols=106  Identities=20%  Similarity=0.253  Sum_probs=87.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++........+.+.+|+.+++.+.|+|++.+++.+. . ...++++||+++|+|.+++....           ..
T Consensus        39 va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~-~~~~l~~~~~~~g~l~~~l~~~~-----------~~  105 (279)
T cd05109          39 VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICL-T-STVQLVTQLMPYGCLLDYVRENK-----------DR  105 (279)
T ss_pred             EEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc-C-CCcEEEEEcCCCCCHHHHHhhcc-----------CC
Confidence            47888876644445677889999999999999999999886 3 34668999999999998887532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       106 ~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~  144 (279)
T cd05109         106 IGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKS  144 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcC
Confidence            455566899999999999999999  999999999999964

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.82  E-value=3e-19  Score=113.83  Aligned_cols=106  Identities=25%  Similarity=0.315  Sum_probs=88.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+++.+|+.+++.++|+|++.+++.+. .....++++||+.+++|.+++.....          ..
T Consensus        33 ~~vK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~~----------~~   99 (261)
T cd05034          33 VAVKTLKPG--TMSPEAFLQEAQIMKKLRHDKLVQLYAVCS-EEEPIYIVTEYMSKGSLLDFLKSGEG----------KK   99 (261)
T ss_pred             EEEEEecCC--ccCHHHHHHHHHHHhhCCCCCEeeeeeeee-cCCceEEEEeccCCCCHHHHHhcccc----------CC
Confidence            477877754  234577899999999999999999999987 66778999999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus       100 ~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~  138 (261)
T cd05034         100 LRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGE  138 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcC
Confidence            455666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.82  E-value=2.6e-19  Score=114.64  Aligned_cols=113  Identities=19%  Similarity=0.242  Sum_probs=88.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.++... .......+.+|+..++.++|+|++++++.+....     ...++++||+++++|..++......     
T Consensus        30 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~-----  104 (273)
T cd05035          30 VAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLG-----  104 (273)
T ss_pred             EEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhcc-----
Confidence            5788877542 2233467889999999999999999999886222     2378999999999999888643211     


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .....+++..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus       105 -~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~  148 (273)
T cd05035         105 -GLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLRE  148 (273)
T ss_pred             -CCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECC
Confidence             01234667778999999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.82  E-value=5.4e-20  Score=117.12  Aligned_cols=106  Identities=27%  Similarity=0.426  Sum_probs=89.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .....+.+.+|++++++++||||+.+++.+. +....++++||+.+++|..++.....          
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------   96 (258)
T cd05578          28 FAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-DEENMYLVVDLLLGGDLRYHLSQKVK----------   96 (258)
T ss_pred             EEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-CCCeEEEEEeCCCCCCHHHHHHhcCC----------
Confidence            4778776542  2234678889999999999999999999998 77889999999999999998876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        97 --l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~  135 (258)
T cd05578          97 --FSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDE  135 (258)
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcC
Confidence              344455899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG4257|consensus

Probab=99.82  E-value=6.3e-20  Score=126.38  Aligned_cols=106  Identities=25%  Similarity=0.327  Sum_probs=94.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.-+.+...+..+.|+.|..++++++||||++++|+|.  ....|+|||.+.-|.|..++..+..           .
T Consensus       421 VAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~-----------s  487 (974)
T KOG4257|consen  421 VAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKD-----------S  487 (974)
T ss_pred             eeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee--ccceeEEEecccchhHHHHHHhccc-----------c
Confidence            68999888877778999999999999999999999999997  4668899999999999999987543           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ++......+++|++.++.|||+.+  ++||||..+|||+.+
T Consensus       488 L~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsS  526 (974)
T KOG4257|consen  488 LPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSS  526 (974)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecC
Confidence            444455899999999999999999  999999999999865

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.82  E-value=2e-19  Score=116.32  Aligned_cols=106  Identities=27%  Similarity=0.411  Sum_probs=87.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+||+.+++++. +....++++||+. ++|.+++....           ..
T Consensus        33 ~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~-----------~~   99 (291)
T cd07844          33 VALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-TKKTLTLVFEYLD-TDLKQYMDDCG-----------GG   99 (291)
T ss_pred             EEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-cCCeEEEEEecCC-CCHHHHHHhCC-----------CC
Confidence            57888775533334456778999999999999999999998 7788999999998 58988876532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       100 ~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~  138 (291)
T cd07844         100 LSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISE  138 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcC
Confidence            445566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.82  E-value=2.1e-19  Score=116.18  Aligned_cols=108  Identities=23%  Similarity=0.272  Sum_probs=87.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .......+.+|+++++.++|++++.+.+.+. ..+..++++||+.+++|...+...+.          
T Consensus        28 ~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------   96 (285)
T cd05632          28 YACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGN----------   96 (285)
T ss_pred             EEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-cCCEEEEEEEeccCccHHHHHHHhcC----------
Confidence            5778776542  1223455778999999999999999999998 67789999999999999877754221          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+++..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus        97 ~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~  137 (285)
T cd05632          97 PGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDD  137 (285)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECC
Confidence            24566677999999999999999999  999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.82  E-value=2e-19  Score=115.00  Aligned_cols=91  Identities=27%  Similarity=0.375  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      +.+.+|+.++++++|+||+++++.+. +....++++||+++++|..++...+.            +.+..+..++.|++.
T Consensus        51 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~~l~~  117 (267)
T cd06628          51 DALAREIALLKELQHENIVQYLGSSL-DADHLNIFLEYVPGGSVAALLNNYGA------------FEETLVRNFVRQILK  117 (267)
T ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEEE-eCCccEEEEEecCCCCHHHHHHhccC------------ccHHHHHHHHHHHHH
Confidence            56778999999999999999999988 66788899999999999999976443            334455899999999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ++.|||+.+  ++|+||+|+||++++
T Consensus       118 ~l~~lH~~~--ivH~di~p~nil~~~  141 (267)
T cd06628         118 GLNYLHNRG--IIHRDIKGANILVDN  141 (267)
T ss_pred             HHHHHHhcC--cccccCCHHHEEEcC
Confidence            999999999  999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.82  E-value=1.9e-19  Score=116.21  Aligned_cols=106  Identities=26%  Similarity=0.429  Sum_probs=88.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++...........+.+|+++++.++|+||+++++.+. .....++++||+++++|..++...+.            
T Consensus        33 ~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~------------   99 (284)
T cd06620          33 MAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-NENNICMCMEFMDCGSLDRIYKKGGP------------   99 (284)
T ss_pred             EEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-cCCEEEEEEecCCCCCHHHHHHhccC------------
Confidence            46777765544445678889999999999999999999998 66889999999999999988865433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.+++.++.|||+ .+  ++|+|++|+||+++.
T Consensus       100 ~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~  139 (284)
T cd06620         100 IPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNS  139 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECC
Confidence            4455558999999999999997 47  999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.82  E-value=1.7e-19  Score=116.07  Aligned_cols=105  Identities=20%  Similarity=0.307  Sum_probs=88.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.++|+||+.+++.+. .....++++||+++++|.+++.. .            .
T Consensus        32 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~   97 (277)
T cd06642          32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-KGTKLWIIMEYLGGGSALDLLKP-G------------P   97 (277)
T ss_pred             EEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-cCCceEEEEEccCCCcHHHHhhc-C------------C
Confidence            47887775533445567889999999999999999999998 67788999999999999888753 1            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~  136 (277)
T cd06642          98 LEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSE  136 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeC
Confidence            445566899999999999999999  999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3e-19  Score=116.82  Aligned_cols=108  Identities=29%  Similarity=0.446  Sum_probs=89.1

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+......  ...+.+..|+++++.++|+||+++++.+. .....++++||+.+++|.+++.....          
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------   97 (316)
T cd05574          29 FALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-TETYLCLVMDYCPGGELFRLLQRQPG----------   97 (316)
T ss_pred             EEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-cCCEEEEEEEecCCCCHHHHHHhCCC----------
Confidence            478887765222  24567889999999999999999999998 67789999999999999998864321          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        98 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~  138 (316)
T cd05574          98 KCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHE  138 (316)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcC
Confidence            23455566889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.82  E-value=1.2e-19  Score=115.73  Aligned_cols=106  Identities=29%  Similarity=0.418  Sum_probs=88.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .....+.+.+|+.+++.++|+||+.+++.+. +....++++||+.+++|.+++.....          
T Consensus        21 ~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------   89 (262)
T cd05572          21 FALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILRDRGL----------   89 (262)
T ss_pred             EEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-cCCccEEEEecCCCCcHHHHHhhcCC----------
Confidence            4778876542  2235577889999999999999999999987 77889999999999999999876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|+|+.+  ++|+|++|+||+++.
T Consensus        90 --l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~  128 (262)
T cd05572          90 --FDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDS  128 (262)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcC
Confidence              344455889999999999999999  999999999999874

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.81  E-value=3.4e-19  Score=114.18  Aligned_cols=113  Identities=20%  Similarity=0.210  Sum_probs=87.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      +|+|.++... +....+.+.+|+.+++.++|+||+++++.+...     ....++++||+.+|+|.+++......     
T Consensus        29 ~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~-----  103 (272)
T cd05075          29 VAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLG-----  103 (272)
T ss_pred             EEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhccc-----
Confidence            4677776542 333467788999999999999999999987411     12467899999999998887542210     


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .....+.+..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus       104 -~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~  147 (272)
T cd05075         104 -DCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNE  147 (272)
T ss_pred             -CCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcC
Confidence             01124566777999999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.81  E-value=2.6e-19  Score=115.19  Aligned_cols=108  Identities=25%  Similarity=0.299  Sum_probs=88.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.++........+.+.+|+.+++.++|+|++.+++++.. .....++++||+++++|.+++.....           
T Consensus        36 ~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-----------  104 (284)
T cd05038          36 VAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-----------  104 (284)
T ss_pred             EEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc-----------
Confidence            478888765332245788999999999999999999998862 24578899999999999999875331           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       105 ~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~  144 (284)
T cd05038         105 QINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVES  144 (284)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcC
Confidence            3455566899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.81  E-value=3.8e-19  Score=112.78  Aligned_cols=107  Identities=25%  Similarity=0.350  Sum_probs=88.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.++++++|+||+.+++.+. +....++++||+.+++|.+++....           ..
T Consensus        22 v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~l~~~~-----------~~   89 (251)
T cd05041          22 VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-QKQPIYIVMELVPGGSLLTFLRKKK-----------NR   89 (251)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-cCCCeEEEEEcCCCCcHHHHHHhcC-----------CC
Confidence            57787765533335577889999999999999999999988 6678889999999999999886532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.+++.++.|||+.+  ++|+|++|+||+++.
T Consensus        90 ~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~  128 (251)
T cd05041          90 LTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGE  128 (251)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcC
Confidence            345556889999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.81  E-value=3.2e-19  Score=113.27  Aligned_cols=108  Identities=21%  Similarity=0.328  Sum_probs=89.9

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+... .+....+.+.+|+++++.++|+|++.+++.+. ..+..++++||+++++|.+++....          ..
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------~~   96 (256)
T cd08220          28 VIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL-EDKALMIVMEYAPGGTLAEYIQKRC----------NS   96 (256)
T ss_pred             EEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe-cCCEEEEEEecCCCCCHHHHHHHhc----------cc
Confidence            467877654 23345677889999999999999999999887 6778899999999999999987532          12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.+++.++.|+|+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~  136 (256)
T cd08220          97 LLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDK  136 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence            3556677899999999999999999  999999999999963

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG2345|consensus

Probab=99.81  E-value=7.7e-20  Score=113.70  Aligned_cols=112  Identities=22%  Similarity=0.233  Sum_probs=91.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      +|+|.+.... .+..+..++|++..++++|||++++++...    +.....|++++|...|+|.+.+.....        
T Consensus        49 YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~--------  119 (302)
T KOG2345|consen   49 YALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKI--------  119 (302)
T ss_pred             hhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhh--------
Confidence            4667666553 446788899999999999999999998873    123468999999999999998875321        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+.+++.++.++|.|+.+||+..+|.+|||+||+||++++
T Consensus       120 kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~  164 (302)
T KOG2345|consen  120 KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD  164 (302)
T ss_pred             cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence            123456778899999999999999999999999999999999976

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.81  E-value=3.6e-19  Score=113.72  Aligned_cols=106  Identities=17%  Similarity=0.260  Sum_probs=87.1

Q ss_pred             CeeeeccCCCC-----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN-----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|.+.....     ....+.+.+|+++++.++|+||+.+.+.+. +.+..++++||+++++|.+++.....       
T Consensus        27 ~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------   98 (265)
T cd06631          27 IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-DDNTISIFMEFVPGGSISSILNRFGP-------   98 (265)
T ss_pred             EEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-cCCeEEEEEecCCCCcHHHHHHhcCC-------
Confidence            46777664321     112356788999999999999999999998 66889999999999999999876433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +++..+..++.|++.++.|+|+.+  ++|+||+|+||++++
T Consensus        99 -----~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~  137 (265)
T cd06631          99 -----LPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMP  137 (265)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECC
Confidence                 344555889999999999999999  999999999999974

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.81  E-value=1e-19  Score=115.85  Aligned_cols=106  Identities=30%  Similarity=0.386  Sum_probs=88.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .....+.+.+|++++++++|+|++++++.+. ..+..++++||+.+++|..++...+           
T Consensus        21 ~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------   88 (265)
T cd05579          21 YAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-GKKNLYLVMEYLPGGDLASLLENVG-----------   88 (265)
T ss_pred             EEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-cCcEEEEEEecCCCCcHHHHHHHcC-----------
Confidence            4778776542  2234577889999999999999999999988 7788899999999999999987543           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+.+..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus        89 -~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~  128 (265)
T cd05579          89 -SLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDS  128 (265)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcC
Confidence             3444555899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.81  E-value=4.6e-19  Score=113.03  Aligned_cols=105  Identities=25%  Similarity=0.361  Sum_probs=86.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+....  ...+++.+|+.++++++|+|++.+++.+.  .+..++++||+.+++|.+++.....          ..
T Consensus        33 ~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~----------~~   98 (260)
T cd05067          33 VAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPEG----------IK   98 (260)
T ss_pred             EEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEcCCCCCHHHHHHhcCC----------CC
Confidence            5788877552  34578899999999999999999998764  4568899999999999988864321          24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        99 ~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~  137 (260)
T cd05067          99 LTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSE  137 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcC
Confidence            455666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.81  E-value=1.9e-19  Score=115.81  Aligned_cols=108  Identities=22%  Similarity=0.296  Sum_probs=88.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .....+.+.+|+.+++.++|||++.+++.+. ..+..|+++||+++++|.+++.....          
T Consensus        21 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------   89 (277)
T cd05577          21 YACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGE----------   89 (277)
T ss_pred             EEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCc----------
Confidence            4677776542  2234556678999999999999999999998 67789999999999999988875431          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.++.|||+.+  ++|+||+|+||++++
T Consensus        90 ~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~  130 (277)
T cd05577          90 PGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDD  130 (277)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence            23455666889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.81  E-value=3.5e-19  Score=114.64  Aligned_cols=105  Identities=19%  Similarity=0.285  Sum_probs=88.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.+.|+|++.+++.+. +....++++||+.+++|.+++... .            
T Consensus        32 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~-~------------   97 (277)
T cd06640          32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KGTKLWIIMEYLGGGSALDLLRAG-P------------   97 (277)
T ss_pred             EEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCEEEEEEecCCCCcHHHHHhcC-C------------
Confidence            47787765533344577889999999999999999999998 677899999999999999887642 2            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.|+.|+|+.+  ++|+||+|+||++++
T Consensus        98 l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~  136 (277)
T cd06640          98 FDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSE  136 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcC
Confidence            344555889999999999999999  999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.81  E-value=4.6e-19  Score=114.28  Aligned_cols=105  Identities=17%  Similarity=0.184  Sum_probs=83.0

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |+|.............+..|+..++.++|+||+++++++.  ....++++||+.+|+|.+++....           ..+
T Consensus        40 ~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--~~~~~~i~e~~~~gsL~~~l~~~~-----------~~~  106 (279)
T cd05111          40 AIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--GASLQLVTQLSPLGSLLDHVRQHR-----------DSL  106 (279)
T ss_pred             EEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC--CCccEEEEEeCCCCcHHHHHHhcc-----------cCC
Confidence            4566544322333456777888889999999999999875  345678999999999999987532           234


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..+..++.|++.|+.|+|+.+  ++|+||||+||+++.
T Consensus       107 ~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~  144 (279)
T cd05111         107 DPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKS  144 (279)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcC
Confidence            55566899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.81  E-value=2.3e-19  Score=115.63  Aligned_cols=102  Identities=25%  Similarity=0.450  Sum_probs=84.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+..+......+.+.+|+.++++++|||++.+++.+. ..+..++++||+++++|..+.                .
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~----------------~   91 (279)
T cd06619          29 LAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-VENRISICTEFMDGGSLDVYR----------------K   91 (279)
T ss_pred             EEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-ECCEEEEEEecCCCCChHHhh----------------c
Confidence            57888766543444567889999999999999999999998 667788999999999886432                1


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~  130 (279)
T cd06619          92 IPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNT  130 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECC
Confidence            234455789999999999999999  999999999999974

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.81  E-value=7e-19  Score=112.26  Aligned_cols=105  Identities=24%  Similarity=0.328  Sum_probs=85.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+.+.+|+.++++++|+|++.+++.+.  ....+++|||+.+++|.+++.....          ..
T Consensus        33 ~~lK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~----------~~   98 (260)
T cd05069          33 VAIKTLKPG--TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDG----------KY   98 (260)
T ss_pred             EEEEEcccC--CccHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCC----------CC
Confidence            467776644  234577889999999999999999998875  3457899999999999998875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~  137 (260)
T cd05069          99 LKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGD  137 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcC
Confidence            455666899999999999999999  999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.81  E-value=6e-19  Score=112.77  Aligned_cols=105  Identities=24%  Similarity=0.320  Sum_probs=85.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...  ....+.+.+|+++++.++|+||+.+++.+.  ....++++||+.+|+|.+++.....          ..
T Consensus        33 valK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~----------~~   98 (262)
T cd05071          33 VAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGEMG----------KY   98 (262)
T ss_pred             EEEEecccC--ccCHHHHHHHHHHHHhCCCCCcceEEEEEC--CCCcEEEEEcCCCCcHHHHHhhccc----------cC
Confidence            577877753  223467889999999999999999998875  3457899999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|+|+.+  ++|+|++|+||+++.
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~  137 (262)
T cd05071          99 LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE  137 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcC
Confidence            455666899999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.81  E-value=4e-19  Score=114.46  Aligned_cols=108  Identities=29%  Similarity=0.457  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..........+.+|+.+++.++|+|++.+++.+. +.+..++++||+. ++|..++.....         ...
T Consensus        28 ~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~---------~~~   96 (284)
T cd07836          28 VALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-TENKLMLVFEYMD-KDLKKYMDTHGV---------RGA   96 (284)
T ss_pred             EEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-eCCcEEEEEecCC-ccHHHHHHhcCC---------CCC
Confidence            57888876644445567788999999999999999999998 6677899999998 588887765321         124


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~  135 (284)
T cd07836          97 LDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINK  135 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECC
Confidence            566777999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.81  E-value=4.3e-19  Score=114.36  Aligned_cols=108  Identities=26%  Similarity=0.392  Sum_probs=88.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .......+.+|+.+++.++|+|++++++.+. ++...++++||+. ++|.+++.....         ..
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~~~~~~~---------~~   96 (285)
T cd07861          28 VAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-QESRLYLIFEFLS-MDLKKYLDSLPK---------GQ   96 (285)
T ss_pred             EEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-eCCeEEEEEecCC-CCHHHHHhcCCC---------CC
Confidence            5788776542 2334567788999999999999999999998 6778899999998 788887764221         12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~  136 (285)
T cd07861          97 YMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDN  136 (285)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcC
Confidence            4566677999999999999999999  999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.81  E-value=4.6e-19  Score=112.66  Aligned_cols=109  Identities=25%  Similarity=0.364  Sum_probs=87.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+.... .....+.+.+|+.++++++|+|++.+.+.+.......++++||+++++|.+.+....          ..
T Consensus        28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~----------~~   97 (257)
T cd08223          28 YVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQK----------GK   97 (257)
T ss_pred             EEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhc----------CC
Confidence            4677776442 233456678899999999999999999887634556889999999999998887521          13


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++.+++.++.+++.|+.++|+.+  ++|+||+|+||+++.
T Consensus        98 ~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~  137 (257)
T cd08223          98 LLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTR  137 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEec
Confidence            4566777999999999999999999  999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=1.6e-19  Score=116.58  Aligned_cols=109  Identities=26%  Similarity=0.321  Sum_probs=89.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+.++++++|+||+++++.+. ..+..++++||+++++|..++.....         ...
T Consensus        29 ~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~---------~~~   98 (286)
T cd06622          29 MAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-IEGAVYMCMEYMDAGSLDKLYAGGVA---------TEG   98 (286)
T ss_pred             EEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-cCCeEEEEEeecCCCCHHHHHHhccc---------cCC
Confidence            47787765433334567889999999999999999999988 67889999999999999888875211         124


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|||+ .+  ++|+||+|+||+++.
T Consensus        99 ~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~  138 (286)
T cd06622          99 IPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNG  138 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECC
Confidence            5666779999999999999997 47  999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.81  E-value=3.7e-19  Score=113.90  Aligned_cols=108  Identities=19%  Similarity=0.229  Sum_probs=86.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++|+||+++++++. ..+..++++||+.+++|..++.....         ...
T Consensus        36 v~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~  104 (268)
T cd06624          36 IAIKEIPERD-SRYVQPLHEEIALHSYLKHRNIVQYLGSDS-ENGFFKIFMEQVPGGSLSALLRSKWG---------PLK  104 (268)
T ss_pred             EEEEEecCCC-HHHHHHHHHHHHHHHhcCCCCeeeeeeeec-cCCEEEEEEecCCCCCHHHHHHHhcc---------cCC
Confidence            4667665442 224567889999999999999999999988 67888999999999999998875311         001


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       105 ~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~  143 (268)
T cd06624         105 DNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNT  143 (268)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence            134455788999999999999999  999999999999964

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=2.4e-19  Score=114.60  Aligned_cols=110  Identities=25%  Similarity=0.384  Sum_probs=89.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|||.+....  .....+.+.+|+.+++.++|+||+.+++.+. ..+..++++||+.+++|.+++.....        ..
T Consensus        30 ~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~  100 (267)
T cd08229          30 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKK--------QK  100 (267)
T ss_pred             EEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-eCCeEEEEEEecCCCCHHHHHHHhhc--------cC
Confidence            4677665431  2234567889999999999999999999998 66788899999999999988864211        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+++..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       101 ~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~  141 (267)
T cd08229         101 RLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITA  141 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence            34567777999999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.81  E-value=2.1e-19  Score=114.72  Aligned_cols=107  Identities=30%  Similarity=0.467  Sum_probs=90.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+++++.++|+||+.+++.+. ..+..++++||+.+++|.+++....           ..
T Consensus        29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~   96 (265)
T cd06605          29 MAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-NNGDISICMEYMDGGSLDKILKEVQ-----------GR   96 (265)
T ss_pred             EEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-cCCEEEEEEEecCCCcHHHHHHHcc-----------CC
Confidence            47787776644445677889999999999999999999998 6688999999999999999987531           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.++.|+|+ .+  ++|+||+|+||++++
T Consensus        97 ~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~  136 (265)
T cd06605          97 IPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNS  136 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECC
Confidence            4556668999999999999999 88  999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.81  E-value=3.8e-19  Score=115.57  Aligned_cols=104  Identities=18%  Similarity=0.306  Sum_probs=86.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+..... ...+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|..++...             .
T Consensus        48 v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~  112 (296)
T cd06654          48 VAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C  112 (296)
T ss_pred             EEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEE-eCCEEEEeecccCCCCHHHHHHhc-------------C
Confidence            46776665422 23567889999999999999999999998 677899999999999999988642             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       113 ~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~  151 (296)
T cd06654         113 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM  151 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcC
Confidence            344556899999999999999999  999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.81  E-value=3.6e-19  Score=114.14  Aligned_cols=91  Identities=24%  Similarity=0.315  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      +.+.+|+.+++.++|+|++.+++.+. ..+..++++||+.+++|.+++...+.            +.+..+..++.|++.
T Consensus        53 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~qi~~  119 (272)
T cd06629          53 KALRSEIETLKDLDHLNIVQYLGFET-TEEYLSIFLEYVPGGSIGSCLRTYGR------------FEEQLVRFFTEQVLE  119 (272)
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEEec-cCCceEEEEecCCCCcHHHHHhhccC------------CCHHHHHHHHHHHHH
Confidence            46778999999999999999999987 67788999999999999998876433            344455889999999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ++.|||+.+  ++|+|++|+||+++.
T Consensus       120 ~l~~lH~~~--i~H~dl~~~nil~~~  143 (272)
T cd06629         120 GLAYLHSKG--ILHRDLKADNLLVDA  143 (272)
T ss_pred             HHHHHhhCC--eeecCCChhhEEEcC
Confidence            999999999  999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0193|consensus

Probab=99.81  E-value=4.9e-20  Score=125.85  Aligned_cols=106  Identities=19%  Similarity=0.295  Sum_probs=89.3

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++.. ..+...+.|.+|+.++++-+|.||+-+.|+|. .... .||..||.|.+|..++.-.+.           
T Consensus       417 VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~-~p~~-AIiTqwCeGsSLY~hlHv~et-----------  483 (678)
T KOG0193|consen  417 VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM-NPPL-AIITQWCEGSSLYTHLHVQET-----------  483 (678)
T ss_pred             eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-CCce-eeeehhccCchhhhhccchhh-----------
Confidence            799999976 34457799999999999999999999999997 4444 799999999999988864321           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..-....++.|+++||.|||.++  |+|+|||.-||++.+
T Consensus       484 kfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~  523 (678)
T KOG0193|consen  484 KFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHE  523 (678)
T ss_pred             hhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEcc
Confidence            2222344899999999999999999  999999999999975

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.81  E-value=4.3e-19  Score=116.14  Aligned_cols=111  Identities=25%  Similarity=0.401  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+...   .....+.+|+.+++.++||||+++++.+.. .....++++||+. ++|..++........   .....
T Consensus        31 ~aiK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~---~~~~~  103 (317)
T cd07868          31 YALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKA---NKKPV  103 (317)
T ss_pred             EEEEEECCC---CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccc---cCCcc
Confidence            467776543   234567899999999999999999998852 3456889999997 788888765332111   01123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .+++..+..++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       104 ~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~  142 (317)
T cd07868         104 QLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVM  142 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEe
Confidence            5677888999999999999999999  99999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.81  E-value=6.6e-19  Score=113.53  Aligned_cols=105  Identities=33%  Similarity=0.543  Sum_probs=85.6

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |+|.+... .....+.+.+|+.+++.++|+|++.+++.+. .....++++||+++++|..++....           .++
T Consensus        34 ~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~-----------~~l  100 (282)
T cd06643          34 AAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELE-----------RPL  100 (282)
T ss_pred             EEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-eCCEEEEEEEecCCCcHHHHHHhcC-----------CCC
Confidence            55655443 2234567888999999999999999999998 6778899999999999988765421           234


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       101 ~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~  138 (282)
T cd06643         101 TEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTL  138 (282)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcc
Confidence            55666899999999999999999  999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.80  E-value=4.6e-19  Score=112.90  Aligned_cols=106  Identities=29%  Similarity=0.415  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+..+..++|+|++++++.+. .....++++||+++++|.+++.....            
T Consensus        29 ~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------   95 (264)
T cd06623          29 YALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-KEGEISIVLEYMDGGSLADLLKKVGK------------   95 (264)
T ss_pred             EEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-cCCeEEEEEEecCCCcHHHHHHHcCC------------
Confidence            46777776533345678899999999999999999999998 66889999999999999999876433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|+|+ .+  ++|+|++|+||+++.
T Consensus        96 l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~  135 (264)
T cd06623          96 IPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINS  135 (264)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECC
Confidence            4455558999999999999999 99  999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.80  E-value=7.3e-19  Score=113.68  Aligned_cols=108  Identities=27%  Similarity=0.481  Sum_probs=83.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|.+.... ..+....+.+|+.+++.+   +||||+++++++..    ....+++++||+. ++|.+++....     
T Consensus        30 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----  103 (290)
T cd07862          30 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVP-----  103 (290)
T ss_pred             EEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCC-----
Confidence            5788776542 233445667788877765   69999999998841    2456889999997 78988886432     


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           ...+++..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       104 -----~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~  145 (290)
T cd07862         104 -----EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTS  145 (290)
T ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcC
Confidence                 123556677999999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.80  E-value=5.6e-19  Score=114.84  Aligned_cols=104  Identities=19%  Similarity=0.298  Sum_probs=87.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. .....++++||+++++|.+++...             .
T Consensus        47 vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~  111 (297)
T cd06656          47 VAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C  111 (297)
T ss_pred             EEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEeecccCCCCHHHHHHhC-------------C
Confidence            5778776542 223467788999999999999999999998 677899999999999999987642             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus       112 ~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~  150 (297)
T cd06656         112 MDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGM  150 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence            344566899999999999999999  999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.80  E-value=4.5e-19  Score=114.77  Aligned_cols=106  Identities=27%  Similarity=0.471  Sum_probs=85.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+......+....+.+|+.+++.++|+||+.+++++. .....++++||+. +++.+.+....           ..
T Consensus        33 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~~   99 (291)
T cd07870          33 VALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-TKETLTFVFEYMH-TDLAQYMIQHP-----------GG   99 (291)
T ss_pred             EEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-cCCeEEEEEeccc-CCHHHHHHhCC-----------CC
Confidence            47888776544444556788999999999999999999988 6778899999996 77776665321           12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       100 ~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~  138 (291)
T cd07870         100 LHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISY  138 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcC
Confidence            344555889999999999999999  999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.80  E-value=4.7e-19  Score=114.94  Aligned_cols=106  Identities=25%  Similarity=0.395  Sum_probs=87.5

Q ss_pred             CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+.....    ......+..|+.+++.++|+|++.+++.+. +....++++||+ +++|.+++....         
T Consensus        28 v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~i~~~~---------   96 (298)
T cd07841          28 VAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-HKSNINLVFEFM-ETDLEKVIKDKS---------   96 (298)
T ss_pred             EEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-cCCEEEEEEccc-CCCHHHHHhccC---------
Confidence            57888775532    223456678999999999999999999998 677899999999 799999887532         


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus        97 --~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~  137 (298)
T cd07841          97 --IVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIAS  137 (298)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcC
Confidence              13455666899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=2.4e-19  Score=120.66  Aligned_cols=89  Identities=25%  Similarity=0.368  Sum_probs=76.5

Q ss_pred             HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                      ...+|+.+++.++|+||+++++.+. .....+++||++. ++|..++....            .+.+..++.++.|++.|
T Consensus       132 ~~~~E~~il~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~------------~l~~~~~~~i~~ql~~a  197 (392)
T PHA03207        132 TPGREIDILKTISHRAIINLIHAYR-WKSTVCMVMPKYK-CDLFTYVDRSG------------PLPLEQAITIQRRLLEA  197 (392)
T ss_pred             cHHHHHHHHHhcCCCCccceeeeEe-eCCEEEEEehhcC-CCHHHHHHhcC------------CCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999998 6678899999997 78888875433            34555669999999999


Q ss_pred             HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          97 LKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        97 l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|||+.+  ++||||||+|||++.
T Consensus       198 L~~LH~~g--ivHrDlkp~Nill~~  220 (392)
T PHA03207        198 LAYLHGRG--IIHRDVKTENIFLDE  220 (392)
T ss_pred             HHHHHHCC--ccccCCCHHHEEEcC
Confidence            99999999  999999999999974

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.80  E-value=9.8e-19  Score=111.52  Aligned_cols=105  Identities=26%  Similarity=0.352  Sum_probs=86.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+....  ...+++.+|+.++++++|++++.+++.+.  ....+++|||+.+++|.+++....          ...
T Consensus        33 ~~~k~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~----------~~~   98 (260)
T cd05070          33 VAVKTLKPGT--MSPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGE----------GRA   98 (260)
T ss_pred             eEEEEecCCC--CCHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcC----------CCC
Confidence            4677776542  23467899999999999999999998875  345789999999999999887532          123


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~  137 (260)
T cd05070          99 LKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGD  137 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeC
Confidence            556677999999999999999999  999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.80  E-value=6.4e-19  Score=112.02  Aligned_cols=108  Identities=19%  Similarity=0.372  Sum_probs=88.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+... ........+.+|+.++++++|+|++.+.+.+. +.+..++++||+.+++|.+.+.....          .
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~----------~   96 (256)
T cd08218          28 YVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE-ENGNLYIVMDYCEGGDLYKKINAQRG----------V   96 (256)
T ss_pred             EEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-CCCeEEEEEecCCCCcHHHHHHhccC----------C
Confidence            467776543 22334567889999999999999999999998 77889999999999999988865321          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.+++.++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~  136 (256)
T cd08218          97 LFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTK  136 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence            3455666899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.80  E-value=5.8e-19  Score=115.02  Aligned_cols=106  Identities=23%  Similarity=0.263  Sum_probs=85.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...........+.+|+.+++.++|+||+++++.+. .. ..++++||+++|+|.+++....           ..
T Consensus        39 vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-~~-~~~~v~e~~~~g~l~~~~~~~~-----------~~  105 (303)
T cd05110          39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SP-TIQLVTQLMPHGCLLDYVHEHK-----------DN  105 (303)
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-CC-CceeeehhcCCCCHHHHHHhcc-----------cC
Confidence            36777765543334456889999999999999999999986 33 3568999999999998886532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~  144 (303)
T cd05110         106 IGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKS  144 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecC
Confidence            445566899999999999999999  999999999999964

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0662|consensus

Probab=99.80  E-value=9e-20  Score=109.37  Aligned_cols=106  Identities=29%  Similarity=0.481  Sum_probs=88.7

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhcc-chhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~   78 (122)
                      ||+|...-+ .+++.+...++|+-+++.++|.||+++++... +.+.+.+|+|||. .+|..+++... .+....     
T Consensus        30 valkrvrlddddegvpssalreicllkelkhknivrl~dvlh-sdkkltlvfe~cd-qdlkkyfdslng~~d~~~-----  102 (292)
T KOG0662|consen   30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEI-----  102 (292)
T ss_pred             EEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-cCceeEEeHHHhh-HHHHHHHHhcCCcCCHHH-----
Confidence            577777655 35667788999999999999999999999998 6677789999997 78988888643 333333     


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                             +..++.|++.|+.|+|+.+  +.|||+||+|+++.++
T Consensus       103 -------~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~n  137 (292)
T KOG0662|consen  103 -------VRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRN  137 (292)
T ss_pred             -------HHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccC
Confidence                   3899999999999999999  9999999999999753

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=7.5e-19  Score=113.64  Aligned_cols=111  Identities=32%  Similarity=0.465  Sum_probs=89.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+...........+.+|++++++++|+||+.+++.+.. ..+.+++++||+++++|.+++.....        ...
T Consensus        29 ~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~  100 (287)
T cd06621          29 FALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKK--------RGG  100 (287)
T ss_pred             EEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHh--------cCC
Confidence            477877765444456778999999999999999999998852 34578899999999999888764211        123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       101 ~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~  140 (287)
T cd06621         101 RIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTR  140 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEec
Confidence            4556677899999999999999999  999999999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.80  E-value=1.1e-18  Score=113.05  Aligned_cols=106  Identities=27%  Similarity=0.440  Sum_probs=86.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+... .....+.+.+|+.+++.++|+|++.+++.+. ..+..+++|||+++++|..++....           ..
T Consensus        40 ~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~  106 (292)
T cd06644          40 AAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFY-WDGKLWIMIEFCPGGAVDAIMLELD-----------RG  106 (292)
T ss_pred             EEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-eCCeEEEEEecCCCCcHHHHHHhhc-----------CC
Confidence            456666544 2334567888999999999999999999988 6678899999999999988775421           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       107 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~  145 (292)
T cd06644         107 LTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTL  145 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcC
Confidence            455666999999999999999999  999999999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.80  E-value=1.4e-19  Score=115.13  Aligned_cols=106  Identities=31%  Similarity=0.528  Sum_probs=87.0

Q ss_pred             CeeeeccCCCCCc-chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLP-FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+....... ......+|+.+++.++|+||+++++.+. .....++++|++.+++|.+++.....           
T Consensus        27 ~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~v~~~~~~~~L~~~l~~~~~-----------   94 (260)
T PF00069_consen   27 VAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-DDNYLYIVMEYCPGGSLQDYLQKNKP-----------   94 (260)
T ss_dssp             EEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-ESSEEEEEEEEETTEBHHHHHHHHSS-----------
T ss_pred             EEEEEeccccccccccchhhhhhhcccccccccccccccccc-cccccccccccccccccccccccccc-----------
Confidence            4788887663222 2233456999999999999999999998 67888899999998899999984333           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.+||+.+  ++|+||||+||+++.
T Consensus        95 -~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~  133 (260)
T PF00069_consen   95 -LSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDE  133 (260)
T ss_dssp             -BBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEEST
T ss_pred             -cccccccccccccccccccccccc--ccccccccccccccc
Confidence             344555999999999999999999  999999999999984

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.80  E-value=5.1e-19  Score=114.48  Aligned_cols=106  Identities=21%  Similarity=0.282  Sum_probs=86.8

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|+++...   .....+.+.+|+.++.++ +|+||+.+++++. .....++++||+++++|.+++.....        
T Consensus        31 ~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------  101 (290)
T cd05613          31 YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TDTKLHLILDYINGGELFTHLSQRER--------  101 (290)
T ss_pred             EEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-cCCeEEEEEecCCCCcHHHHHHHcCC--------
Confidence            4778776531   223456778899999999 6999999999988 66788899999999999998876433        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..+..++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus       102 ----l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~  140 (290)
T cd05613         102 ----FKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDS  140 (290)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECC
Confidence                334455888999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.80  E-value=5.9e-19  Score=128.05  Aligned_cols=113  Identities=24%  Similarity=0.379  Sum_probs=89.0

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++... ........+..|+.+++.++||||+.++++|.. ....+++||||+.+++|..++.....        ..
T Consensus        41 vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~--------~~  112 (1021)
T PTZ00266         41 FCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYK--------MF  112 (1021)
T ss_pred             EEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhh--------cc
Confidence            467777644 233355778899999999999999999998852 34578999999999999998865211        11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCC-----CCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIK-----PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~-----~~i~h~dlk~~nill~~  121 (122)
                      ..+++..++.++.|++.||.|||+.+     .+|+|+||||+|||++.
T Consensus       113 g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266        113 GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            34667777999999999999999843     24999999999999853

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.80  E-value=1.5e-18  Score=110.27  Aligned_cols=105  Identities=23%  Similarity=0.398  Sum_probs=86.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ......+.+|++++++++|++++.+++.+. .....++++||+.+++|.+++....           ..
T Consensus        31 ~~~k~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~-----------~~   96 (256)
T cd05112          31 VAIKTIREG--AMSEEDFIEEAQVMMKLSHPKLVQLYGVCT-ERSPICLVFEFMEHGCLSDYLRAQR-----------GK   96 (256)
T ss_pred             EEEEECCCC--CCCHHHHHHHHHHHHhCCCCCeeeEEEEEc-cCCceEEEEEcCCCCcHHHHHHhCc-----------cC
Confidence            467776644  223467889999999999999999999987 6677899999999999998886432           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.+||+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~  135 (256)
T cd05112          97 FSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGE  135 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcC
Confidence            445566899999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.80  E-value=9e-19  Score=111.97  Aligned_cols=107  Identities=19%  Similarity=0.222  Sum_probs=84.8

Q ss_pred             CeeeeccCCC-C---CcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-N---LPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+.... .   ....+.+.+|+.+++++.|+||+.+++++... ...+++++||+++++|.+++.....+      
T Consensus        30 v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~------  103 (265)
T cd06652          30 LAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGAL------  103 (265)
T ss_pred             EEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCC------
Confidence            5778765331 1   12345778899999999999999999988622 35678999999999999988754333      


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+...+.++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus       104 ------~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~  141 (265)
T cd06652         104 ------TENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDS  141 (265)
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecC
Confidence                  33444889999999999999999  999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.80  E-value=1.2e-18  Score=111.16  Aligned_cols=105  Identities=20%  Similarity=0.251  Sum_probs=85.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+.+.+|+.+++.++|+|++.+++.+. . ...++++||+++++|.+++.....          ..
T Consensus        33 ~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~-~~~~~v~e~~~~~~L~~~~~~~~~----------~~   98 (260)
T cd05073          33 VAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K-EPIYIITEFMAKGSLLDFLKSDEG----------SK   98 (260)
T ss_pred             EEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEc-C-CCeEEEEEeCCCCcHHHHHHhCCc----------cc
Confidence            467766644  223567889999999999999999999987 4 667899999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~  137 (260)
T cd05073          99 QPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA  137 (260)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcC
Confidence            344556889999999999999998  999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.80  E-value=5.7e-19  Score=114.84  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=86.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++|||++.+++.+. .....++++||+.+++|..++.. .            .
T Consensus        49 v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~-~------------~  113 (297)
T cd06659          49 VAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYL-VGEELWVLMEFLQGGALTDIVSQ-T------------R  113 (297)
T ss_pred             EEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhhee-eCCeEEEEEecCCCCCHHHHHhh-c------------C
Confidence            5788776542 234567889999999999999999999998 67788999999999999887653 1            2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|+|+.+  ++|+|++|+||+++.
T Consensus       114 ~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~  152 (297)
T cd06659         114 LNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTL  152 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEcc
Confidence            345556899999999999999999  999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.80  E-value=9.3e-19  Score=112.80  Aligned_cols=106  Identities=30%  Similarity=0.478  Sum_probs=89.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .....+.+.+|+.+++.++|+|++.+++.+. .....++++||+ +++|.+++....           .
T Consensus        28 ~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~-----------~   94 (286)
T cd07832          28 VALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-HGSGFVLVMEYM-PSDLSEVLRDEE-----------R   94 (286)
T ss_pred             EEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-cCCeeEEEeccc-CCCHHHHHHhcC-----------C
Confidence            5778777553 2344678899999999999999999999998 678889999999 899999886532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.++.|||+.+  ++|+||+|+||++++
T Consensus        95 ~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~  134 (286)
T cd07832          95 PLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISA  134 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcC
Confidence            3555666999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.80  E-value=3.3e-19  Score=115.74  Aligned_cols=104  Identities=21%  Similarity=0.324  Sum_probs=86.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+..++.++|+|++.+++.+. ..+..++++||+++++|..++.. .            .
T Consensus        50 vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~  114 (292)
T cd06658          50 VAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R  114 (292)
T ss_pred             EEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHhee-cCCeEEEEEeCCCCCcHHHHHhc-C------------C
Confidence            4777765442 234567889999999999999999999998 67888999999999999887753 2            2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus       115 l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~  153 (292)
T cd06658         115 MNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTS  153 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcC
Confidence            344556899999999999999999  999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.80  E-value=9.8e-19  Score=112.55  Aligned_cols=105  Identities=22%  Similarity=0.304  Sum_probs=87.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|...........+.+.+|+.++.+++|+|++.+++.+. .....++++||+.+++|..++...             .
T Consensus        32 ~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~-------------~   97 (277)
T cd06641          32 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPG-------------P   97 (277)
T ss_pred             EEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-eCCeEEEEEEeCCCCcHHHHHhcC-------------C
Confidence            47787665433344567888999999999999999999998 677889999999999999887531             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.+||+.+  ++|+|++|+||+++.
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~  136 (277)
T cd06641          98 LDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSE  136 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECC
Confidence            345566899999999999999999  999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.80  E-value=9.5e-19  Score=111.15  Aligned_cols=106  Identities=20%  Similarity=0.281  Sum_probs=87.1

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+....    .+...+.+.+|+.+++.++|+|++++++.+. +....++++||+++++|.+++.....        
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------   98 (258)
T cd06632          28 FAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-EEDNLYIFLELVPGGSLAKLLKKYGS--------   98 (258)
T ss_pred             EEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-cCCeEEEEEEecCCCcHHHHHHhcCC--------
Confidence            4677765432    1224467889999999999999999999988 77788999999999999999875432        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..++.++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        99 ----~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~  137 (258)
T cd06632          99 ----FPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDT  137 (258)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence                344555889999999999999999  999999999999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.80  E-value=1.3e-18  Score=112.44  Aligned_cols=105  Identities=25%  Similarity=0.347  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.....  ..+.+.+|+++++.++|+|++.+++.+. .....++++||+++++|.+++....           ..
T Consensus        47 ~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  112 (286)
T cd06614          47 VAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYL-VGDELWVVMEYMDGGSLTDIITQNF-----------VR  112 (286)
T ss_pred             EEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEE-ECCEEEEEEeccCCCcHHHHHHHhc-----------cC
Confidence            46777765422  4567889999999999999999999998 6688899999999999999998643           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       113 l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~  151 (286)
T cd06614         113 MNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSK  151 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcC
Confidence            455566899999999999999999  999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.80  E-value=6.6e-19  Score=112.26  Aligned_cols=106  Identities=25%  Similarity=0.402  Sum_probs=88.7

Q ss_pred             CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++.... +...+.+.+|+.+++.++|+||+++++.+. +.+..++++||+.+++|.+.+.....           
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-----------   95 (264)
T cd06626          28 MAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-HREKVYIFMEYCSGGTLEELLEHGRI-----------   95 (264)
T ss_pred             EEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-cCCEEEEEEecCCCCcHHHHHhhcCC-----------
Confidence            46787776532 235678899999999999999999999987 77888999999999999998875432           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..+..++.+++.|+.|||+.+  ++|+||+|+||+++.
T Consensus        96 -~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~  134 (264)
T cd06626          96 -LDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDH  134 (264)
T ss_pred             -CChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence             334445889999999999999999  999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.79  E-value=6.7e-19  Score=111.84  Aligned_cols=108  Identities=20%  Similarity=0.374  Sum_probs=88.3

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+... ......+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|.+++.....          .
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------~   96 (257)
T cd08225          28 CVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-ENGRLFIVMEYCDGGDLMKRINRQRG----------V   96 (257)
T ss_pred             EEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-cCCeEEEEEecCCCCcHHHHHHhccC----------C
Confidence            466766543 22234567789999999999999999999988 67789999999999999998865321          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~  136 (257)
T cd08225          97 LFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSK  136 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcC
Confidence            3455667899999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=9.3e-19  Score=112.48  Aligned_cols=105  Identities=23%  Similarity=0.378  Sum_probs=87.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.+.........+.+.+|+.+++.++   |+|++.+++.+. +....++++||+.+++|.+++...           
T Consensus        29 ~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-----------   96 (277)
T cd06917          29 VALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-KGPRLWIIMEYAEGGSVRTLMKAG-----------   96 (277)
T ss_pred             EEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-eCCEEEEEEecCCCCcHHHHHHcc-----------
Confidence            47788775544445567888999999986   999999999987 677889999999999999887642           


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..++.++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus        97 --~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~  136 (277)
T cd06917          97 --PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTN  136 (277)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcC
Confidence              2345556899999999999999999  999999999999974

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.79  E-value=1.2e-18  Score=113.28  Aligned_cols=104  Identities=22%  Similarity=0.343  Sum_probs=87.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++|+|++.+++.+. .....++++||+.+++|..++...             .
T Consensus        47 v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~  111 (296)
T cd06655          47 VAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFL-VGDELFVVMEYLAGGSLTDVVTET-------------C  111 (296)
T ss_pred             EEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEe-cCceEEEEEEecCCCcHHHHHHhc-------------C
Confidence            4677776442 234567889999999999999999999998 678899999999999998887542             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.++.|||+.+  ++|+||+|+||+++.
T Consensus       112 l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~  150 (296)
T cd06655         112 MDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGM  150 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence            445666999999999999999999  999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4236|consensus

Probab=99.79  E-value=8.8e-19  Score=119.10  Aligned_cols=107  Identities=26%  Similarity=0.370  Sum_probs=85.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.+-. ..+....+.+|+.+|+++.||+|+.+..-|+ +.+.+++|||.+.|.-|.-++....           .
T Consensus       592 VAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E-T~ervFVVMEKl~GDMLEMILSsEk-----------g  659 (888)
T KOG4236|consen  592 VAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE-TPERVFVVMEKLHGDMLEMILSSEK-----------G  659 (888)
T ss_pred             eeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec-CCceEEEEehhhcchHHHHHHHhhc-----------c
Confidence            7999998763 2334467789999999999999999998888 8888999999998444444444322           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++.....++.||+.++.|||.++  |+|+||||+|+|+.+
T Consensus       660 RL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas  699 (888)
T KOG4236|consen  660 RLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLAS  699 (888)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeecc
Confidence            3444444889999999999999999  999999999999975

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.79  E-value=3.8e-19  Score=114.68  Aligned_cols=106  Identities=24%  Similarity=0.348  Sum_probs=86.6

Q ss_pred             CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+..... ....+.+.+|+++++.++|+||+++++++. +.+..++++||+.++++........            
T Consensus        29 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~------------   95 (286)
T cd07846          29 VAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-RKKRLYLVFEFVDHTVLDDLEKYPN------------   95 (286)
T ss_pred             EEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-cCCeEEEEEecCCccHHHHHHhccC------------
Confidence            47787765422 234567789999999999999999999998 7788999999999887776554322            


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~  135 (286)
T cd07846          96 GLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQ  135 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECC
Confidence            2455666999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.79  E-value=1.5e-18  Score=110.67  Aligned_cols=109  Identities=22%  Similarity=0.265  Sum_probs=90.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|++.........+.+.+|+..++.++|+|++.+++.+. .....++++|++.+++|.+++.....         ...
T Consensus        29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~~~~---------~~~   98 (267)
T cd06610          29 VAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-VGDELWLVMPYLSGGSLLDIMKSSYP---------RGG   98 (267)
T ss_pred             EEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-eCCEEEEEEeccCCCcHHHHHHHhcc---------cCC
Confidence            46787765533335677889999999999999999999988 67888999999999999999875322         123


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        99 ~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~  137 (267)
T cd06610          99 LDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGE  137 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcC
Confidence            455666899999999999999999  999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=8.9e-19  Score=112.48  Aligned_cols=105  Identities=23%  Similarity=0.279  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+|++.+.+.+. +....++++||+.+++|.+++...             .
T Consensus        29 ~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~-------------~   94 (274)
T cd06609          29 VAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-KGSKLWIIMEYCGGGSCLDLLKPG-------------K   94 (274)
T ss_pred             EEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-ECCeEEEEEEeeCCCcHHHHHhhc-------------C
Confidence            46777765533444567889999999999999999999988 668899999999999999888642             3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        95 ~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~  133 (274)
T cd06609          95 LDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSE  133 (274)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence            455666999999999999999999  999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.1e-18  Score=119.53  Aligned_cols=91  Identities=27%  Similarity=0.370  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      ..+.+|++++++++|+||+.+++++. ..+..++++|++. ++|..++....           ..+.+..++.++.|++.
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~-----------~~l~~~~~~~i~~qi~~  271 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRV-VGGLTCLVLPKYR-SDLYTYLGARL-----------RPLGLAQVTAVARQLLS  271 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEE-ECCEEEEEEEccC-CCHHHHHHhcC-----------CCCCHHHHHHHHHHHHH
Confidence            44678999999999999999999987 6678889999996 78888776421           24556677999999999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ||.|||+.+  ++||||||+|||++.
T Consensus       272 aL~yLH~~g--IvHrDLKP~NILl~~  295 (461)
T PHA03211        272 AIDYIHGEG--IIHRDIKTENVLVNG  295 (461)
T ss_pred             HHHHHHHCC--EEECcCCHHHEEECC
Confidence            999999999  999999999999975

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.79  E-value=8.8e-19  Score=116.60  Aligned_cols=104  Identities=23%  Similarity=0.342  Sum_probs=81.8

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+... ........+.+|+.+++.++||||+++++++....     ...+++|||+. +++.+.+..         
T Consensus        49 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------  118 (359)
T cd07876          49 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHM---------  118 (359)
T ss_pred             eEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHhc---------
Confidence            588888754 23334567789999999999999999999986222     35789999997 566665532         


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       119 -----~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~  158 (359)
T cd07876         119 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  158 (359)
T ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECC
Confidence                 1334455789999999999999999  999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4278|consensus

Probab=99.79  E-value=1.7e-19  Score=124.62  Aligned_cols=106  Identities=24%  Similarity=0.288  Sum_probs=91.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++.+.  -..+.|+.|+.+++.++|||++++.|+|+ ....+||+.|||..|.|.+++++...          ..
T Consensus       295 vAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT-~EpPFYIiTEfM~yGNLLdYLRecnr----------~e  361 (1157)
T KOG4278|consen  295 VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-HEPPFYIITEFMCYGNLLDYLRECNR----------SE  361 (1157)
T ss_pred             eehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhc-cCCCeEEEEecccCccHHHHHHHhch----------hh
Confidence            6899998773  24689999999999999999999999998 66778999999999999999987533          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.-.++.++.||+.+|.||..++  ++||||..+|+|+.+
T Consensus       362 v~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgE  400 (1157)
T KOG4278|consen  362 VPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE  400 (1157)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccc
Confidence            334455788999999999999999  999999999999875

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.79  E-value=3.6e-18  Score=108.62  Aligned_cols=104  Identities=20%  Similarity=0.274  Sum_probs=85.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|..+..   ...+.+.+|+.+++.++|+|++.+++.+. . +..++++||+.+++|.+++.....          ..
T Consensus        32 ~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~-~~~~~v~e~~~~~~L~~~l~~~~~----------~~   96 (254)
T cd05083          32 VAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVIL-H-NGLYIVMELMSKGNLVNFLRTRGR----------AL   96 (254)
T ss_pred             eEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEc-C-CCcEEEEECCCCCCHHHHHHhcCc----------CC
Confidence            467776543   23467889999999999999999999986 3 346899999999999999875321          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|+|+.+  ++|+|++|+||+++.
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~  135 (254)
T cd05083          97 VSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSE  135 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcC
Confidence            455566899999999999999999  999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.79  E-value=7.2e-19  Score=111.05  Aligned_cols=100  Identities=20%  Similarity=0.136  Sum_probs=79.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+....      ...+|...+....|||++.+++.+. +....++++||+.+|+|.+.+.....            
T Consensus        21 ~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------   81 (237)
T cd05576          21 FILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIV-SEDSVFLVLQHAEGGKLWSHISKFLN------------   81 (237)
T ss_pred             EEEEeecchh------hhhhHHHHHHhcCCCceeehhhhee-cCCeEEEEEecCCCCCHHHHHHHhcC------------
Confidence            4677776541      1233444455567999999999998 67889999999999999998865433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|+|+.+  ++|+|+||+||+++.
T Consensus        82 l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~  120 (237)
T cd05576          82 IPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDD  120 (237)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcC
Confidence            445556899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.79  E-value=1.9e-18  Score=109.75  Aligned_cols=104  Identities=25%  Similarity=0.401  Sum_probs=87.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+....   ..+.+.+|+++++.++|+|++.+++.+. +....++++||+.+++|.+++....           ..
T Consensus        31 ~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~l~~~~-----------~~   95 (256)
T cd06612          31 VAIKVVPVEE---DLQEIIKEISILKQCDSPYIVKYYGSYF-KNTDLWIVMEYCGAGSVSDIMKITN-----------KT   95 (256)
T ss_pred             EEEEEeecHH---HHHHHHHHHHHHHhCCCCcEeeeeeeee-cCCcEEEEEecCCCCcHHHHHHhCc-----------cC
Confidence            3566665442   2578899999999999999999999998 6688999999999999999886532           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        96 l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~  134 (256)
T cd06612          96 LTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNE  134 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECC
Confidence            455666999999999999999999  999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.79  E-value=1.5e-18  Score=113.42  Aligned_cols=111  Identities=25%  Similarity=0.410  Sum_probs=85.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+...   .....+.+|+.+++.++||||+.+++++. ......++++||+. ++|.+++........   .....
T Consensus        31 ~a~k~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~---~~~~~  103 (317)
T cd07867          31 YALKQIEGT---GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKA---NKKPM  103 (317)
T ss_pred             EEEEEecCC---CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhcccc---CCCCc
Confidence            466766543   23356789999999999999999999885 24567889999997 688888764322111   01123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .+++..++.++.|++.|+.|||+.+  ++|+||||+||++.
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~  142 (317)
T cd07867         104 QLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVM  142 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEc
Confidence            4677788999999999999999999  99999999999983

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.79  E-value=1.4e-18  Score=112.03  Aligned_cols=107  Identities=27%  Similarity=0.436  Sum_probs=87.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .......+.+|++++++++|+||+++++.+. +.+..++++||+. ++|..++....          ..
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~~~~~~----------~~   95 (284)
T cd07860          28 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLH-QDLKKFMDASP----------LS   95 (284)
T ss_pred             EEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-cCCcEEEEeeccc-cCHHHHHHhCC----------CC
Confidence            4777776542 2334467889999999999999999999998 7778899999996 68888776432          13


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus        96 ~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~  135 (284)
T cd07860          96 GIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINT  135 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            4556677999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.8e-18  Score=110.60  Aligned_cols=107  Identities=20%  Similarity=0.246  Sum_probs=85.2

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|.+....    .......+.+|+.++++++|+||+.+++.+... ...+++++||+++++|.+++...+.       
T Consensus        30 ~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-------  102 (264)
T cd06653          30 LAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGA-------  102 (264)
T ss_pred             EEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCC-------
Confidence            4677765321    122345778899999999999999999988622 3568899999999999988875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..+..++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       103 -----l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~  141 (264)
T cd06653         103 -----LTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDS  141 (264)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence                 334455889999999999999999  999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=2.1e-18  Score=109.22  Aligned_cols=106  Identities=26%  Similarity=0.396  Sum_probs=88.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+.... .+...+.+.+|+++++.++|+|++.+.+.+. +.+..++++||+.+++|.+++.....           
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~-----------   95 (254)
T cd06627          28 VAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-TSDSLYIILEYAENGSLRQIIKKFGP-----------   95 (254)
T ss_pred             EEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-eCCEEEEEEecCCCCcHHHHHHhccC-----------
Confidence            4677776552 2235577889999999999999999999988 66888999999999999998876433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.++.+||+.+  ++|+|++|+||+++.
T Consensus        96 -l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~  134 (254)
T cd06627          96 -FPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTK  134 (254)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECC
Confidence             344555899999999999999999  999999999999975

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.78  E-value=4e-18  Score=110.48  Aligned_cols=107  Identities=24%  Similarity=0.373  Sum_probs=85.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .......+.+|+.++++++|+|++++++++. +....++++||++ +++.+.+.....          .
T Consensus        30 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~----------~   97 (294)
T PLN00009         30 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-SEKRLYLVFEYLD-LDLKKHMDSSPD----------F   97 (294)
T ss_pred             EEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-cCCeEEEEEeccc-ccHHHHHHhCCC----------C
Confidence            4677765432 2234466788999999999999999999998 7788999999997 688777754322          1


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus        98 ~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~  137 (294)
T PLN00009         98 AKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDR  137 (294)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEEC
Confidence            2344556889999999999999999  999999999999974

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=1.2e-18  Score=120.30  Aligned_cols=111  Identities=20%  Similarity=0.234  Sum_probs=87.8

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-------CeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||||++... .++.....+.+|+..+..++|+|++.++..+....       ..+++++||+.+|+|.+.+.....    
T Consensus        60 vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~----  135 (496)
T PTZ00283         60 FAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAK----  135 (496)
T ss_pred             EEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhc----
Confidence            588988754 23344567788999999999999999988774121       136799999999999998875321    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ....+.+..+..++.|++.|+.|+|+.+  ++||||||+|||++.
T Consensus       136 ----~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~  178 (496)
T PTZ00283        136 ----TNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCS  178 (496)
T ss_pred             ----cCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeC
Confidence                1234566677999999999999999999  999999999999975

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.78  E-value=1.5e-18  Score=111.93  Aligned_cols=106  Identities=24%  Similarity=0.290  Sum_probs=81.1

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhh---CCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKA---LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~---~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|.+.....  ........+|..+++.   ..|++++.+++.+. ..+..+++|||+.+++|..++...+        
T Consensus        22 ~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~--------   92 (279)
T cd05633          22 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-TPDKLCFILDLMNGGDLHYHLSQHG--------   92 (279)
T ss_pred             EEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-cCCeEEEEEecCCCCCHHHHHHhcC--------
Confidence            47887765421  1122334455444443   47999999999998 6678899999999999998886543        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+.+..+..++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus        93 ----~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~  132 (279)
T cd05633          93 ----VFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDE  132 (279)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECC
Confidence                3455566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.4e-18  Score=109.98  Aligned_cols=106  Identities=31%  Similarity=0.404  Sum_probs=88.3

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+.....  ......+.+|+.++++++|+|++.+++.+. ..+..++++||+++++|.+++.....          
T Consensus        21 ~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~~----------   89 (250)
T cd05123          21 YAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-TEEKLYLVLEYAPGGELFSHLSKEGR----------   89 (250)
T ss_pred             EEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-cCCeeEEEEecCCCCcHHHHHHhcCC----------
Confidence            46777765522  224567888999999999999999999998 77889999999999999999876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.++.|+|+.+  ++|+|++|+||+++.
T Consensus        90 --l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~  128 (250)
T cd05123          90 --FSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDA  128 (250)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcC
Confidence              344555899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.78  E-value=9.7e-19  Score=112.75  Aligned_cols=106  Identities=30%  Similarity=0.493  Sum_probs=86.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.++... .+.....+.+|+.+++.++|+|++++++.+. +....++++||+. ++|..++....           .
T Consensus        28 ~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~   94 (284)
T cd07839          28 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH-SDKKLTLVFEYCD-QDLKKYFDSCN-----------G   94 (284)
T ss_pred             EEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-cCCceEEEEecCC-CCHHHHHHhcC-----------C
Confidence            4677776542 2334466788999999999999999999998 6778899999997 68877765421           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        95 ~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~  134 (284)
T cd07839          95 DIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINK  134 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcC
Confidence            3455666999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.78  E-value=1.7e-18  Score=112.14  Aligned_cols=106  Identities=29%  Similarity=0.502  Sum_probs=85.7

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.++... .......+.+|+.++++++||||+.+++++. ..  ...++++||+. ++|..++.....         
T Consensus        33 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-~~~~~~~~lv~e~~~-~~L~~~~~~~~~---------  101 (293)
T cd07843          33 VALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVV-GSNLDKIYMVMEYVE-HDLKSLMETMKQ---------  101 (293)
T ss_pred             EEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEE-ecCCCcEEEEehhcC-cCHHHHHHhccC---------
Confidence            4677776542 2333456678999999999999999999886 34  78999999998 689888765321         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..++.++.|++.|+.|||+.+  ++|+||+|+||++++
T Consensus       102 --~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~  141 (293)
T cd07843         102 --PFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNN  141 (293)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECC
Confidence              3556666999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.78  E-value=3.2e-18  Score=110.67  Aligned_cols=104  Identities=20%  Similarity=0.347  Sum_probs=85.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+... .....+.+.+|+.+++.++|+|++.+++.+. ..+..++++||+.+++|.+++.. ..            
T Consensus        47 ~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~-~~------------  111 (285)
T cd06648          47 VAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-VGDELWVVMEFLEGGALTDIVTH-TR------------  111 (285)
T ss_pred             EEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEE-cCCeEEEEEeccCCCCHHHHHHh-CC------------
Confidence            456666433 2233466789999999999999999999987 67788999999999999988765 22            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|+|+.+  ++|+||+|+||+++.
T Consensus       112 ~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~  150 (285)
T cd06648         112 MNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTS  150 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcC
Confidence            334455899999999999999999  999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.78  E-value=2.4e-18  Score=110.14  Aligned_cols=107  Identities=21%  Similarity=0.267  Sum_probs=84.8

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+....    .....+.+.+|+.+++.++|+||+.+++.+... ....++++||+++++|.+.+.....       
T Consensus        30 ~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~-------  102 (266)
T cd06651          30 LAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA-------  102 (266)
T ss_pred             EEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCC-------
Confidence            4677665431    112345678899999999999999999988632 4678899999999999998875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+...+.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 -----l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~  141 (266)
T cd06651         103 -----LTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDS  141 (266)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECC
Confidence                 334455889999999999999998  999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.78  E-value=3.2e-18  Score=110.43  Aligned_cols=109  Identities=28%  Similarity=0.386  Sum_probs=85.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|++...  ......+.+|+.+++.+ +|+|++.+++.+.    ......++++||+++++|.+++.....       
T Consensus        46 ~~ik~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------  116 (286)
T cd06638          46 AAVKILDPI--HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLK-------  116 (286)
T ss_pred             eEEEeeccc--cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhc-------
Confidence            466766543  22345677899999999 7999999999874    134568999999999999988763211       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ....+.+..+..++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus       117 -~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~  159 (286)
T cd06638         117 -RGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTT  159 (286)
T ss_pred             -cCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECC
Confidence             1234566677899999999999999999  999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.78  E-value=1.1e-18  Score=112.52  Aligned_cols=106  Identities=24%  Similarity=0.367  Sum_probs=85.7

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++... .....+.+.+|+++++.++|+||+.+++.+. ..+..++++||+.++.+..+.....            
T Consensus        29 v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~~~------------   95 (288)
T cd07833          29 VAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-RKGRLYLVFEYVERTLLELLEASPG------------   95 (288)
T ss_pred             EEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-ECCEEEEEEecCCCCHHHHHHhcCC------------
Confidence            4777776542 3335578899999999999999999999998 6778999999999765555443322            


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~  135 (288)
T cd07833          96 GLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSE  135 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence            2455566899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0574|consensus

Probab=99.78  E-value=5.2e-19  Score=113.36  Aligned_cols=104  Identities=21%  Similarity=0.421  Sum_probs=88.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|..+-.   .+.+.+..|+.++++|+.++++++||.|. ....+|+|||||..|+..++++..+           .+
T Consensus        61 ~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYF-K~sDLWIVMEYCGAGSiSDI~R~R~-----------K~  125 (502)
T KOG0574|consen   61 LAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYF-KHSDLWIVMEYCGAGSISDIMRARR-----------KP  125 (502)
T ss_pred             EEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhc-cCCceEeehhhcCCCcHHHHHHHhc-----------CC
Confidence            456655533   46788999999999999999999999998 6677889999999999999998643           35


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++...+.|+.|||...  -+|||+|..|||+..
T Consensus       126 L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT  164 (502)
T KOG0574|consen  126 LSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNT  164 (502)
T ss_pred             ccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcc
Confidence            566666899999999999999988  899999999999964

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.9e-18  Score=110.17  Aligned_cols=106  Identities=25%  Similarity=0.285  Sum_probs=82.0

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHh-hCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHK-ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|.++....  ......+..|..++. ..+|+|++++++.+. ..+..++++||+++++|.+++.....         
T Consensus        24 vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------   93 (260)
T cd05611          24 FAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-SKDYLYLVMEYLNGGDCASLIKTLGG---------   93 (260)
T ss_pred             EEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-cCCeEEEEEeccCCCCHHHHHHHcCC---------
Confidence            57887765421  112233444554443 448999999999998 77889999999999999999875433         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +++..+..++.|++.|+.|+|+.+  ++|+||+|+||+++.
T Consensus        94 ---~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~  132 (260)
T cd05611          94 ---LPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQ  132 (260)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence               445566899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0608|consensus

Probab=99.78  E-value=7e-19  Score=121.58  Aligned_cols=106  Identities=26%  Similarity=0.345  Sum_probs=90.2

Q ss_pred             eeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           2 CAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         2 avK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      |+|.+.+.  .......+...|-.+|...+.+=||++|..|+ +.+.+|+||+|++||++..+|-.-+.+.+..+     
T Consensus       658 AmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ-DkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LA-----  731 (1034)
T KOG0608|consen  658 AMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLA-----  731 (1034)
T ss_pred             HHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec-cCCceEEEEeccCCccHHHHHHHhccCHHHHH-----
Confidence            56666554  12234556667888899999999999999999 88999999999999999999988777766666     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                             ..|+.+++.++++.|..|  ++||||||.|||||.+
T Consensus       732 -------RFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrd  765 (1034)
T KOG0608|consen  732 -------RFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD  765 (1034)
T ss_pred             -------HHHHHHHHHHHHHHHhcc--ceecccCccceEEccC
Confidence                   889999999999999999  9999999999999864

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.78  E-value=2.4e-18  Score=114.68  Aligned_cols=104  Identities=23%  Similarity=0.351  Sum_probs=82.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||.+.... .....+.+.+|+.+++.++|+||+.+++++...     ....+++|||+. +++...+...        
T Consensus        52 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--------  122 (364)
T cd07875          52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--------  122 (364)
T ss_pred             EEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHhc--------
Confidence            5788887542 334456788999999999999999999987522     235789999997 6777666431        


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       123 ------~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  161 (364)
T cd07875         123 ------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  161 (364)
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECC
Confidence                  234455889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.78  E-value=1.5e-18  Score=115.32  Aligned_cols=104  Identities=23%  Similarity=0.350  Sum_probs=81.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... .....+.+.+|+.+++.++|+||+.+++++...     ....+++|||+. +++.+.+..         
T Consensus        45 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------  114 (355)
T cd07874          45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM---------  114 (355)
T ss_pred             EEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh---------
Confidence            5788887542 233456778999999999999999999988522     235789999997 567666542         


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       115 -----~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~  154 (355)
T cd07874         115 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  154 (355)
T ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECC
Confidence                 1334455889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0577|consensus

Probab=99.78  E-value=1.6e-19  Score=123.82  Aligned_cols=106  Identities=23%  Similarity=0.332  Sum_probs=88.9

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||.+.-..++  .-.++++.|+..|+++.|||.+.+.|||. .....|+|||||- |+-.+++.-++           
T Consensus        54 VAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-re~TaWLVMEYCl-GSAsDlleVhk-----------  120 (948)
T KOG0577|consen   54 VAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-REHTAWLVMEYCL-GSASDLLEVHK-----------  120 (948)
T ss_pred             eeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-ccchHHHHHHHHh-ccHHHHHHHHh-----------
Confidence            688888755333  24588999999999999999999999998 5566789999998 78888876532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.+..+-.+.++.+.|+.|||+.+  .+|||+|..|||+++
T Consensus       121 KplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse  161 (948)
T KOG0577|consen  121 KPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSE  161 (948)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecC
Confidence            34555666899999999999999999  999999999999975

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.78  E-value=4.6e-18  Score=108.93  Aligned_cols=107  Identities=21%  Similarity=0.287  Sum_probs=86.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.....  ......+..|+.+++++ +|+|++++++.+...     ....++++||+.+++|.+++.....      
T Consensus        34 ~aik~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~------  105 (272)
T cd06637          34 AAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG------  105 (272)
T ss_pred             EEEEEEEcC--CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC------
Confidence            467777644  23346788899999998 799999999998632     2458899999999999998875321      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       106 ----~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~  146 (272)
T cd06637         106 ----NTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTE  146 (272)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECC
Confidence                23556667899999999999999999  999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=3.1e-18  Score=106.37  Aligned_cols=102  Identities=19%  Similarity=0.277  Sum_probs=76.7

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-----CCCCccceeeeeeeCCC--e-EEEEEec--cCCCCHHHHHHhccchhH
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-----DHPRVVKLYDVFEIDAN--S-FCTVLEY--CDGHDLDFYLKQHKTIAE   71 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~--~-~~lv~e~--~~~~~L~~~l~~~~~~~~   71 (122)
                      +||+..... ....+.+.+|+.+++.+     .||||+++++++.++.+  . +.+++||  +.+++|.+++... .+. 
T Consensus        28 ~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~-  104 (210)
T PRK10345         28 CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYE-  104 (210)
T ss_pred             EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-ccc-
Confidence            466665442 23456789999999999     57999999999985532  3 3378999  5579999999752 211 


Q ss_pred             HhhhhcCCCCChHHHHHHHHHHHHHH-HHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 REARCLSQPYLSTSARSIVMQVVSAL-KYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                 +.  ..++.+++.++ .|||+.+  |+||||||+||++++
T Consensus       105 -----------e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~  140 (210)
T PRK10345        105 -----------ED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQR  140 (210)
T ss_pred             -----------Hh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEec
Confidence                       11  34577777777 8999999  999999999999963

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.77  E-value=4.9e-18  Score=110.86  Aligned_cols=110  Identities=26%  Similarity=0.401  Sum_probs=87.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+....  ..+..+...+|+.++..++|||++++++.+. +.  ...++++||+. +++.+.+......       
T Consensus        30 ~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-------  100 (316)
T cd07842          30 YAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFL-EHADKSVYLLFDYAE-HDLWQIIKFHRQA-------  100 (316)
T ss_pred             EEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEe-CCCCceEEEEEeCCC-cCHHHHHHhhccC-------
Confidence            5788887642  2334577888999999999999999999997 45  67999999997 5777776542210       


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       101 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~  143 (316)
T cd07842         101 KRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMG  143 (316)
T ss_pred             CCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcC
Confidence            0124566777999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0690|consensus

Probab=99.77  E-value=1.2e-19  Score=117.12  Aligned_cols=107  Identities=27%  Similarity=0.402  Sum_probs=93.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++++..  ..+...+.+.|-++|+.++||.+..+...|+ ..+.+|+||||..||.|.--+...+.+.+...    
T Consensus       196 YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ-t~drlCFVMeyanGGeLf~HLsrer~FsE~Rt----  270 (516)
T KOG0690|consen  196 YAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ-TQDRLCFVMEYANGGELFFHLSRERVFSEDRT----  270 (516)
T ss_pred             eehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc-cCceEEEEEEEccCceEeeehhhhhcccchhh----
Confidence            5889998872  4456788899999999999999999999998 88999999999999999877776666666666    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                              ..+..+|+.++.|||+.+  |+.||+|.+|+|++++
T Consensus       271 --------RFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkD  304 (516)
T KOG0690|consen  271 --------RFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKD  304 (516)
T ss_pred             --------hhhhHHHHHHhhhhhhCC--eeeeechhhhheeccC
Confidence                    889999999999999999  9999999999999864

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=3e-18  Score=114.08  Aligned_cols=89  Identities=27%  Similarity=0.423  Sum_probs=76.2

Q ss_pred             HHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991          18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL   97 (122)
Q Consensus        18 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l   97 (122)
                      ...|+.++++++|+||+++++.+. .....++++|++. ++|..++....           ..+.+..++.++.|++.|+
T Consensus       104 ~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~-----------~~~~~~~~~~i~~qi~~aL  170 (357)
T PHA03209        104 TLIEAMLLQNVNHPSVIRMKDTLV-SGAITCMVLPHYS-SDLYTYLTKRS-----------RPLPIDQALIIEKQILEGL  170 (357)
T ss_pred             cHHHHHHHHhCCCCCCcChhheEE-eCCeeEEEEEccC-CcHHHHHHhcc-----------CCCCHHHHHHHHHHHHHHH
Confidence            356899999999999999999998 6677889999996 78888776421           2455666799999999999


Q ss_pred             HHHHcCCCCeeeeCCCCCCccccc
Q psy4991          98 KYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        98 ~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .|||+.+  ++||||||+||+++.
T Consensus       171 ~~LH~~~--ivHrDlkp~Nill~~  192 (357)
T PHA03209        171 RYLHAQR--IIHRDVKTENIFIND  192 (357)
T ss_pred             HHHHHCC--eecCCCCHHHEEECC
Confidence            9999999  999999999999864

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.77  E-value=3.4e-18  Score=111.01  Aligned_cols=104  Identities=20%  Similarity=0.323  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+... .....+.+.+|+.+++.++|||++.+++.+. .....++++||+.+++|.+++...             .
T Consensus        47 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~  111 (293)
T cd06647          47 VAIKQMNLQ-QQPKKELIINEILVMRENKHPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C  111 (293)
T ss_pred             EEEEEeccc-cchHHHHHHHHHHHHhhcCCCCeeehhheee-eCCcEEEEEecCCCCcHHHHHhhc-------------C
Confidence            467776543 2234567889999999999999999999998 667889999999999999988642             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       112 l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~  150 (293)
T cd06647         112 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM  150 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcC
Confidence            334455889999999999999999  999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.77  E-value=1.6e-18  Score=112.00  Aligned_cols=106  Identities=23%  Similarity=0.320  Sum_probs=85.8

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      +|||.++...   .....+.+.+|+.++.++ +|++++.+.+.+. .....++++||+.+++|...+.....        
T Consensus        31 ~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~--------  101 (288)
T cd05583          31 YAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-TDTKLHLILDYVNGGELFTHLYQREH--------  101 (288)
T ss_pred             EEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-cCCEEEEEEecCCCCcHHHHHhhcCC--------
Confidence            4677766431   122446678899999999 6999999999987 67788999999999999988865333        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..+..++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       102 ----~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~  140 (288)
T cd05583         102 ----FTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDS  140 (288)
T ss_pred             ----cCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECC
Confidence                344455889999999999999998  999999999999974

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.77  E-value=4.7e-18  Score=115.98  Aligned_cols=105  Identities=23%  Similarity=0.283  Sum_probs=79.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||||.+...     .....+|+.+++.++|+||+.+++++...       ...++++|||++ +++..++.....     
T Consensus        94 vAiK~i~~~-----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~-----  162 (440)
T PTZ00036         94 VAIKKVLQD-----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYAR-----  162 (440)
T ss_pred             EEEEEEecC-----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhh-----
Confidence            577776543     12345799999999999999998876311       124678999998 678777653211     


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ....+++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       163 ---~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~  205 (440)
T PTZ00036        163 ---NNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDP  205 (440)
T ss_pred             ---cCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcC
Confidence               1234566677999999999999999999  999999999999973

>KOG0612|consensus

Probab=99.77  E-value=2.8e-19  Score=128.87  Aligned_cols=106  Identities=25%  Similarity=0.290  Sum_probs=91.3

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|+++++  .+.....-|..|-.+|...+.+=|+.+..+|+ +..++|+||||++||+|..++.....+++.      
T Consensus       103 YAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-D~~~LYlVMdY~pGGDlltLlSk~~~~pE~------  175 (1317)
T KOG0612|consen  103 YAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-DERYLYLVMDYMPGGDLLTLLSKFDRLPED------  175 (1317)
T ss_pred             hhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-CccceEEEEecccCchHHHHHhhcCCChHH------
Confidence            578888886  23445567778888999889999999999999 889999999999999999999875444444      


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            +...|+..++.|+.-+|+.|  ++|||+||+|||+|.
T Consensus       176 ------~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  176 ------WARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDK  210 (1317)
T ss_pred             ------HHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecc
Confidence                  44999999999999999999  999999999999985

>KOG0579|consensus

Probab=99.77  E-value=3.9e-19  Score=123.08  Aligned_cols=104  Identities=28%  Similarity=0.435  Sum_probs=88.4

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |.|++... +....++++.|+++|..|+||+|+.++++|. -.+.++|+.|||+||....++-.-           ...+
T Consensus        61 AaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy-~enkLwiliEFC~GGAVDaimlEL-----------~r~L  127 (1187)
T KOG0579|consen   61 AAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYY-FENKLWILIEFCGGGAVDAIMLEL-----------GRVL  127 (1187)
T ss_pred             hhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHh-ccCceEEEEeecCCchHhHHHHHh-----------cccc
Confidence            34555544 2346788999999999999999999999997 567788999999999998887652           3467


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .++++.-+++|++.++.|||+++  |+|||||..|||++
T Consensus       128 tE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~T  164 (1187)
T KOG0579|consen  128 TEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLT  164 (1187)
T ss_pred             chHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEE
Confidence            77888999999999999999999  99999999999986

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.77  E-value=4.4e-18  Score=110.53  Aligned_cols=104  Identities=20%  Similarity=0.313  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+... .......+.+|+.+++.++|+|++.+++.+. ..+..++++||+++++|.+++.. +            .
T Consensus        48 v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-~------------~  112 (292)
T cd06657          48 VAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R  112 (292)
T ss_pred             EEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEE-eCCEEEEEEecCCCCcHHHHHhc-C------------C
Confidence            467766543 2234566889999999999999999999998 67888999999999999887653 2            2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.|+|+.+  ++|+|++|+||++++
T Consensus       113 ~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~  151 (292)
T cd06657         113 MNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTH  151 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            344556899999999999999999  999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.77  E-value=9.1e-18  Score=107.62  Aligned_cols=113  Identities=21%  Similarity=0.250  Sum_probs=86.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... .....+.+.+|+.+++.++|||++.+++.+....     ...+++++|+.+|+|..++......     
T Consensus        30 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----  104 (273)
T cd05074          30 VAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIG-----  104 (273)
T ss_pred             EEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhccc-----
Confidence            4788877653 2334567889999999999999999999885221     1246888999999998887532210     


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .....+++..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       105 -~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~  148 (273)
T cd05074         105 -EEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNE  148 (273)
T ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcC
Confidence             01124566777999999999999999999  999999999999974

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.77  E-value=2.8e-18  Score=113.54  Aligned_cols=105  Identities=28%  Similarity=0.407  Sum_probs=82.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||.+.... .....+.+.+|+.+++.++|+||+++++++...     ....+++++++ +++|..++.. .       
T Consensus        43 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~-------  113 (343)
T cd07878          43 VAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-Q-------  113 (343)
T ss_pred             EEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-C-------
Confidence            5788887542 222345677899999999999999999988522     13478899988 5888877653 2       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       114 -----~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~  153 (343)
T cd07878         114 -----KLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNE  153 (343)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECC
Confidence                 3455566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.77  E-value=1.8e-18  Score=110.99  Aligned_cols=106  Identities=27%  Similarity=0.403  Sum_probs=87.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|+.....  .....+.+.+|..+++++. |+||+++++.+. +.+..+++||++.+++|.+++...+          
T Consensus        29 ~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~----------   97 (280)
T cd05581          29 YAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-DEENLYFVLEYAPNGELLQYIRKYG----------   97 (280)
T ss_pred             EEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-CCceEEEEEcCCCCCcHHHHHHHcC----------
Confidence            4677776531  2233466788999999998 999999999998 7778999999999999999987643          


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..++.++.|++.|+.+||+.+  ++|+|++|+||+++.
T Consensus        98 --~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~  137 (280)
T cd05581          98 --SLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDK  137 (280)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECC
Confidence              3445556999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.77  E-value=6.1e-18  Score=108.93  Aligned_cols=109  Identities=25%  Similarity=0.354  Sum_probs=85.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHH-HhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.++..........+..|... ++..+|+|++++++.+. ..+..++++||++ |+|.+++.....        ...
T Consensus        29 vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~--------~~~   98 (283)
T cd06617          29 MAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-REGDVWICMEVMD-TSLDKFYKKVYD--------KGL   98 (283)
T ss_pred             EEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-cCCcEEEEhhhhc-ccHHHHHHHhcc--------CCC
Confidence            578888765433334556667665 55568999999999998 6677899999997 788888765321        113


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+. +  ++|+|+||+||++++
T Consensus        99 ~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~  139 (283)
T cd06617          99 TIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINR  139 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECC
Confidence            566777899999999999999986 7  999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.76  E-value=5.9e-18  Score=107.72  Aligned_cols=111  Identities=25%  Similarity=0.353  Sum_probs=88.4

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+... ......+.+..|+.+++.++|+|++.+++.+.. .....++++||+++++|..++.....        ..
T Consensus        28 ~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~--------~~   99 (265)
T cd08217          28 LVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKK--------ER   99 (265)
T ss_pred             EEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhh--------cc
Confidence            467777654 233345678889999999999999999998752 34568899999999999999875321        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHH-----cCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLN-----EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh-----~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.+..++.++.|++.|+.|+|     +.+  ++|+|++|+||+++.
T Consensus       100 ~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~  145 (265)
T cd08217         100 KYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDA  145 (265)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEec
Confidence            34566777999999999999999     777  999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.76  E-value=1.1e-17  Score=106.12  Aligned_cols=110  Identities=32%  Similarity=0.532  Sum_probs=90.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .....+.+.+|+++++.++|+|++.+.+.+. .....++++||+++++|...+.....        ...
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~   98 (258)
T cd08215          28 YVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-EKGKLCIVMEYADGGDLSQKIKKQKK--------EGK   98 (258)
T ss_pred             EEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-cCCEEEEEEEecCCCcHHHHHHHhhc--------cCC
Confidence            4677776542 2245567889999999999999999999998 66889999999999999998876321        113


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.+++.|+.+||+.+  ++|+|++|+||+++.
T Consensus        99 ~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~  138 (258)
T cd08215          99 PFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTS  138 (258)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcC
Confidence            4566677999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.76  E-value=4.9e-18  Score=109.44  Aligned_cols=107  Identities=28%  Similarity=0.447  Sum_probs=88.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... ..+....+.+|+++++.++|+|++++++.+. +.+..++++||++ ++|.+++.....          .
T Consensus        27 ~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-~~~~~~iv~e~~~-~~l~~~~~~~~~----------~   94 (283)
T cd07835          27 VALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-SENKLYLVFEFLD-LDLKKYMDSSPL----------T   94 (283)
T ss_pred             EEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-cCCeEEEEEeccC-cCHHHHHhhCCC----------C
Confidence            4778776552 2334467889999999999999999999998 6788999999996 789888865331          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        95 ~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~  134 (283)
T cd07835          95 GLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDR  134 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcC
Confidence            4556677999999999999999998  999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0614|consensus

Probab=99.76  E-value=5.7e-20  Score=123.99  Aligned_cols=106  Identities=27%  Similarity=0.391  Sum_probs=94.8

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|++++.  .+.+..++...|-++|..++.|.||++|..|. +.+.+||+||-|-||.++..++..+.+....+    
T Consensus       448 fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-d~kyvYmLmEaClGGElWTiLrdRg~Fdd~ta----  522 (732)
T KOG0614|consen  448 FALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-DSKYVYMLMEACLGGELWTILRDRGSFDDYTA----  522 (732)
T ss_pred             HHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-cchhhhhhHHhhcCchhhhhhhhcCCcccchh----
Confidence            467777765  34556688889999999999999999999998 88899999999999999999999888777777    


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                              ..++.++++|..|||+++  |+.|||||+|++++.
T Consensus       523 --------rF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~  555 (732)
T KOG0614|consen  523 --------RFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDN  555 (732)
T ss_pred             --------hhhHHHHHHHHHHHHhcC--ceeccCChhheeecc
Confidence                    889999999999999999  999999999999985

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.76  E-value=8.8e-18  Score=108.48  Aligned_cols=108  Identities=27%  Similarity=0.418  Sum_probs=82.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|.++... .........+|+.+++.+   +|+||+++++++...    ....++++|++. ++|..++.....    
T Consensus        28 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----  102 (288)
T cd07863          28 VALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP----  102 (288)
T ss_pred             EEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC----
Confidence            5788877542 222345566777777665   799999999988521    345789999998 688888764211    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+++..+..++.|++.|+.|+|+.+  ++|+|+||+||+++.
T Consensus       103 ------~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~  143 (288)
T cd07863         103 ------PGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTS  143 (288)
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence                  23566777999999999999999999  999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG4645|consensus

Probab=99.76  E-value=2.8e-19  Score=130.23  Aligned_cols=106  Identities=25%  Similarity=0.431  Sum_probs=87.5

Q ss_pred             eeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           2 CAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      |||-++-. ...+....+.+|..++..++|||++++||+-. ..+..+|.||||.+|+|.+.+...+...+.-.      
T Consensus      1264 AvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt------ 1336 (1509)
T KOG4645|consen 1264 AVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-HREKVYIFMEYCEGGSLASLLEHGRIEDEMVT------ 1336 (1509)
T ss_pred             hhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-cHHHHHHHHHHhccCcHHHHHHhcchhhhhHH------
Confidence            56665543 22344566778999999999999999999987 55677899999999999999987655555444      


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                            .-+..|++.|+.|||+.|  |+|||+||+||+|+.+
T Consensus      1337 ------~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1337 ------RVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFN 1370 (1509)
T ss_pred             ------HHHHHHHHHHHHHHHhcC--ceecCCCccceeeecC
Confidence                  678999999999999999  9999999999999853

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=1.5e-17  Score=107.73  Aligned_cols=109  Identities=27%  Similarity=0.366  Sum_probs=85.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|.+...  ......+.+|+.+++++ +|+|++.+++.+....    ...++++||+.+++|.+++.....       
T Consensus        50 ~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-------  120 (291)
T cd06639          50 AAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLI-------  120 (291)
T ss_pred             EEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhh-------
Confidence            366766543  22346677899999998 8999999999986322    358899999999999988764211       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ....+.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       121 -~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~  163 (291)
T cd06639         121 -CGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTT  163 (291)
T ss_pred             -cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcC
Confidence             1234566777999999999999999999  999999999999974

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.76  E-value=1.2e-17  Score=105.46  Aligned_cols=106  Identities=24%  Similarity=0.426  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +++|.+..... ...+.+.+|++.++.++|++++.+.+.+. .....++++||+++++|.+++....           ..
T Consensus        28 ~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~-----------~~   94 (253)
T cd05122          28 VAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYL-KKDELWIVMEFCSGGSLKDLLKSTN-----------QT   94 (253)
T ss_pred             EEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEe-cCCeEEEEEecCCCCcHHHHHhhcC-----------CC
Confidence            46677765532 35678889999999999999999999998 6678889999999999999887532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.++.+||+.+  ++|+|++|+||+++.
T Consensus        95 ~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~  133 (253)
T cd05122          95 LTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTS  133 (253)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEcc
Confidence            455666899999999999999998  999999999999974

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.76  E-value=8.5e-18  Score=108.39  Aligned_cols=106  Identities=23%  Similarity=0.262  Sum_probs=80.5

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHH---HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYN---IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~---~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+......  .....+..|..   .++...|++++.+.+.+. +.+..++++||+.+++|..++...+        
T Consensus        22 vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~g~~L~~~l~~~~--------   92 (278)
T cd05606          22 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHG--------   92 (278)
T ss_pred             EEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-cCCEEEEEEecCCCCcHHHHHHhcC--------
Confidence            578877654211  11122333433   344457999999999998 6778999999999999988876533        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        93 ----~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~  132 (278)
T cd05606          93 ----VFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDE  132 (278)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECC
Confidence                3455566999999999999999999  999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.76  E-value=3.2e-18  Score=112.93  Aligned_cols=106  Identities=23%  Similarity=0.416  Sum_probs=85.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+.... .......+.+|+.+++.++|+||+++++++..   .....++++||+. ++|.+++.....        
T Consensus        33 valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--------  103 (334)
T cd07855          33 VAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQP--------  103 (334)
T ss_pred             EEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCC--------
Confidence            5788877652 23345677889999999999999999988752   2356889999996 688888765333        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..++.++.|++.|+.|||+.+  ++|+|+||+||++++
T Consensus       104 ----~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~  142 (334)
T cd07855         104 ----LTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNE  142 (334)
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence                344555999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.76  E-value=1.4e-17  Score=108.74  Aligned_cols=107  Identities=29%  Similarity=0.474  Sum_probs=85.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.... ..+......+|+.++++++|+|++++++.+... .+..++++||+. ++|.+++....           
T Consensus        35 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----------  102 (309)
T cd07845          35 VALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMP-----------  102 (309)
T ss_pred             EEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcc-----------
Confidence            5788876542 223344567899999999999999999998633 256889999997 68888776421           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       103 ~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~  143 (309)
T cd07845         103 TPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTD  143 (309)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence            24566677999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.76  E-value=8.7e-18  Score=110.81  Aligned_cols=89  Identities=21%  Similarity=0.392  Sum_probs=77.4

Q ss_pred             HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                      .+.+|+.+++.++|+||+.+++.+. ..+..++++||+. ++|.+++.....            +.+.....++.|++.|
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~------------~~~~~~~~~~~ql~~a  131 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYV-EGDFINLVMDIMA-SDLKKVVDRKIR------------LTESQVKCILLQILNG  131 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEe-cCCcEEEEEeccc-cCHHHHHHhcCC------------CCHHHHHHHHHHHHHH
Confidence            5778999999999999999999998 6778999999997 789888865333            3445558999999999


Q ss_pred             HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          97 LKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        97 l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|||+.+  ++|+||+|+||+++.
T Consensus       132 L~~LH~~~--i~H~dl~~~nill~~  154 (335)
T PTZ00024        132 LNVLHKWY--FMHRDLSPANIFINS  154 (335)
T ss_pred             HHHHHhCC--eecccccHHHeEECC
Confidence            99999999  999999999999874

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.75  E-value=7.2e-18  Score=110.05  Aligned_cols=106  Identities=22%  Similarity=0.322  Sum_probs=85.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .....+.+.+|+.+++.++|||++++.+.+. +....++++||+. |++.+++....           
T Consensus        43 v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~-g~l~~~~~~~~-----------  109 (307)
T cd06607          43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-REHTAWLVMEYCL-GSASDILEVHK-----------  109 (307)
T ss_pred             EEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-eCCeEEEEHHhhC-CCHHHHHHHcc-----------
Confidence            4677775432  2223456889999999999999999999998 6777889999997 67777665321           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus       110 ~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~  150 (307)
T cd06607         110 KPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTE  150 (307)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECC
Confidence            23456666899999999999999999  999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.75  E-value=6.7e-18  Score=107.14  Aligned_cols=110  Identities=25%  Similarity=0.387  Sum_probs=89.8

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+... ........+.+|+.+++.++|+||+.+.+.+. .....++++||+++++|..++.....        ...
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~--------~~~   98 (256)
T cd08530          28 YALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-DGNKLCIVMEYAPFGDLSKAISKRKK--------KRK   98 (256)
T ss_pred             EEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-cCCEEEEEehhcCCCCHHHHHHHHHh--------hcC
Confidence            467776653 23344567788999999999999999999998 66889999999999999998865211        123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        99 ~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~  138 (256)
T cd08530          99 LIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVA  138 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEec
Confidence            4566777999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.75  E-value=1.1e-17  Score=111.24  Aligned_cols=104  Identities=23%  Similarity=0.349  Sum_probs=82.3

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+... .+......+.+|+.++++++|+|++++++++....     ...++++||+. ++|.+.+...        
T Consensus        44 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--------  114 (353)
T cd07850          44 VAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD--------  114 (353)
T ss_pred             EEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc--------
Confidence            578887654 23334567788999999999999999999885222     35789999997 6887776532        


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            +....+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       115 ------l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~  153 (353)
T cd07850         115 ------LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  153 (353)
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECC
Confidence                  233445889999999999999999  999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.75  E-value=1.2e-17  Score=105.85  Aligned_cols=106  Identities=26%  Similarity=0.340  Sum_probs=87.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      |++|.+.... .+...+.+.+|+.++++++|+|++.+++.+. ..  ...++++||+.+++|.+++....          
T Consensus        28 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~----------   96 (260)
T cd06606          28 MAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER-DEEKNTLNIFLEYVSGGSLSSLLKKFG----------   96 (260)
T ss_pred             EEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-cCCCCeEEEEEEecCCCcHHHHHHHcC----------
Confidence            4667766542 1234677889999999999999999999997 55  77889999999999999987643          


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..++.++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus        97 --~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~  136 (260)
T cd06606          97 --KLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDS  136 (260)
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcC
Confidence              3445556899999999999999999  999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.75  E-value=1.6e-17  Score=108.93  Aligned_cols=106  Identities=21%  Similarity=0.330  Sum_probs=85.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+....  .......+.+|+++++.++|+|++.+++++. +....++++||+. |++.+.+....           
T Consensus        53 valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-g~l~~~~~~~~-----------  119 (317)
T cd06635          53 VAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-REHTAWLVMEYCL-GSASDLLEVHK-----------  119 (317)
T ss_pred             EEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-eCCeEEEEEeCCC-CCHHHHHHHhc-----------
Confidence            4778776442  2233457889999999999999999999998 6677889999997 67777665321           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+.++..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       120 ~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~  160 (317)
T cd06635         120 KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTE  160 (317)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECC
Confidence            23556677899999999999999999  999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.75  E-value=1e-17  Score=107.82  Aligned_cols=106  Identities=24%  Similarity=0.357  Sum_probs=83.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.++............+|+..+.++ +|+|++.+++.+. +.  +..++++||+. +++.+.+....          
T Consensus        27 ~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~l~~~~----------   94 (282)
T cd07831          27 YAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLF-DRKTGRLALVFELMD-MNLYELIKGRK----------   94 (282)
T ss_pred             EEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEe-cCCCCcEEEEEecCC-ccHHHHHHhcc----------
Confidence            4788877653333334456788889888 5999999999987 44  67899999997 68877776422          


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ..+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        95 -~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~  135 (282)
T cd07831          95 -RPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD  135 (282)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC
Confidence             23556667999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0200|consensus

Probab=99.75  E-value=9e-18  Score=118.30  Aligned_cols=119  Identities=20%  Similarity=0.356  Sum_probs=98.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch-hHHhh-hhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AEREA-RCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~-~~~   77 (122)
                      ||||.++........+.+..|+.++..+ .|+|++.+.|+|+ ..+.++++.||+..|+|..+++..+.. ..... ...
T Consensus       331 VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t-~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~  409 (609)
T KOG0200|consen  331 VAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT-QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFP  409 (609)
T ss_pred             EEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec-cCCceEEEEEeccCCcHHHHHHhccccccccccCCCc
Confidence            6899999886667789999999999999 7999999999998 577888999999999999999987611 00000 001


Q ss_pred             C--CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          78 S--QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        78 ~--~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .  ..+....++.++.||+.||.||.+..  ++||||..+|||+.++
T Consensus       410 ~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRNVLi~~~  454 (609)
T KOG0200|consen  410 NERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARNVLITKN  454 (609)
T ss_pred             cccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhhEEecCC
Confidence            1  23777888999999999999999998  9999999999999753

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.3e-17  Score=106.77  Aligned_cols=109  Identities=24%  Similarity=0.362  Sum_probs=86.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      +|+|++....  ...+.+.+|+.+++++ +|+|++++++.+...     ....++++||+.+++|.+++.....      
T Consensus        34 ~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------  105 (275)
T cd06608          34 VAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRK------  105 (275)
T ss_pred             EEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhh------
Confidence            4667666442  2346788999999999 799999999998622     3458899999999999888764220      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ....+.+..+..++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       106 --~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~  148 (275)
T cd06608         106 --KGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTK  148 (275)
T ss_pred             --cCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEcc
Confidence              1134566677999999999999999999  999999999999974

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PTZ00284 protein kinase; Provisional

Probab=99.75  E-value=9.7e-18  Score=115.12  Aligned_cols=104  Identities=21%  Similarity=0.351  Sum_probs=78.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCC------CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDH------PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++..  .........|+.+++.++|      .+++.+++++.......|+++|++ +++|.+++...+.      
T Consensus       157 vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~------  227 (467)
T PTZ00284        157 CAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGP------  227 (467)
T ss_pred             EEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCC------
Confidence            688988643  2233455667777777654      457888888875566789999998 4788888765433      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                            +.+..+..++.|++.|+.|||+ .+  |+||||||+|||++.
T Consensus       228 ------l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~  267 (467)
T PTZ00284        228 ------FSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMET  267 (467)
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEec
Confidence                  4445558999999999999998 48  999999999999964

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.75  E-value=1.4e-17  Score=108.42  Aligned_cols=107  Identities=27%  Similarity=0.463  Sum_probs=83.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|.+.... .......+.+|+.++++++||||+++++.+...       ....++++||+. +++...+....     
T Consensus        40 ~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----  113 (310)
T cd07865          40 VALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN-----  113 (310)
T ss_pred             EEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc-----
Confidence            5778776442 233345667899999999999999999988522       134689999997 68877765421     


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       114 ------~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~  154 (310)
T cd07865         114 ------VKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITK  154 (310)
T ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECC
Confidence                  23556677999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.75  E-value=1e-17  Score=107.83  Aligned_cols=106  Identities=26%  Similarity=0.446  Sum_probs=87.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC--CeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.+.... ..+..+.+.+|+.+++.++|+|++.+++.+. ..  +..++++||++ ++|..++....          
T Consensus        27 ~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~~lv~e~~~-~~l~~~~~~~~----------   94 (287)
T cd07840          27 VALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVT-SKGKGSIYMVFEYMD-HDLTGLLDSPE----------   94 (287)
T ss_pred             EEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEe-cCCCCcEEEEecccc-ccHHHHHhccC----------
Confidence            4788887663 3445577889999999999999999999997 44  78999999997 58887776431          


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ..+.+..++.++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus        95 -~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~  135 (287)
T cd07840          95 -VKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINN  135 (287)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcC
Confidence             23455666999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.75  E-value=9.8e-18  Score=123.24  Aligned_cols=100  Identities=23%  Similarity=0.310  Sum_probs=80.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.+.....     ....|++.+++++||||+++++++. +....++||||+++|+|.+++..               
T Consensus       718 vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~---------------  776 (968)
T PLN00113        718 FVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCR-SEKGAYLIHEYIEGKNLSEVLRN---------------  776 (968)
T ss_pred             EEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEE-cCCCCEEEEeCCCCCcHHHHHhc---------------
Confidence            57887764421     1234688899999999999999998 66778899999999999998852               


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|+|.. .++++|||+||+||+++.
T Consensus       777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~  818 (968)
T PLN00113        777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG  818 (968)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence            33455588999999999999943 233999999999999874

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.75  E-value=1.2e-17  Score=110.34  Aligned_cols=105  Identities=25%  Similarity=0.384  Sum_probs=83.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+..........++.+|+.+++.++|+||+.+++.+...    ....++++||+. +++.+.+..           
T Consensus        33 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----------  100 (336)
T cd07849          33 VAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT-----------  100 (336)
T ss_pred             EEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc-----------
Confidence            5788876543344556788899999999999999999887522    235789999997 688776653           


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       101 --~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~  141 (336)
T cd07849         101 --QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNT  141 (336)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECC
Confidence              23455566899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.74  E-value=1.9e-17  Score=106.73  Aligned_cols=107  Identities=21%  Similarity=0.271  Sum_probs=85.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      +|+|.....  ......+..|+.+++++ +|+|++++++.+..     .....+++|||+.+|+|..++.....      
T Consensus        44 ~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~------  115 (282)
T cd06636          44 AAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG------  115 (282)
T ss_pred             EEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC------
Confidence            467766543  22345678899999998 79999999999852     24578899999999999998875322      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       116 ----~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~  156 (282)
T cd06636         116 ----NALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTE  156 (282)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence                23455666889999999999999999  999999999999974

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.74  E-value=2.5e-17  Score=108.56  Aligned_cols=105  Identities=25%  Similarity=0.357  Sum_probs=84.0

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+... ......+.+.+|+.+++.++|||++++.+++.......++++||+. ++|..++...             
T Consensus        38 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-------------  103 (328)
T cd07856          38 VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSR-------------  103 (328)
T ss_pred             EEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcC-------------
Confidence            477877653 2333457788999999999999999999998744567889999995 7888777532             


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++|+|++|+||++++
T Consensus       104 ~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~  143 (328)
T cd07856         104 PLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINE  143 (328)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECC
Confidence            2334445788999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.74  E-value=1.8e-17  Score=109.79  Aligned_cols=105  Identities=30%  Similarity=0.478  Sum_probs=83.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||.+.... .....+.+.+|+.+++.++|+||+.+++++..+.     ...++++|++ +++|..++.. .       
T Consensus        43 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~-------  113 (343)
T cd07880          43 VAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-E-------  113 (343)
T ss_pred             EEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-C-------
Confidence            5788876542 2234466789999999999999999999986332     2468999999 5788877653 2       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+++..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       114 -----~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~  153 (343)
T cd07880         114 -----KLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNE  153 (343)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence                 3455566899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0199|consensus

Probab=99.74  E-value=2.5e-18  Score=119.73  Aligned_cols=107  Identities=25%  Similarity=0.308  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++..+..-..-.+|++|+.+|.+++|+|++++||+.. + ....||+|.+..|+|.+.|.....          ..
T Consensus       141 VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl-~-qp~mMV~ELaplGSLldrLrka~~----------~~  208 (1039)
T KOG0199|consen  141 VAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL-D-QPAMMVFELAPLGSLLDRLRKAKK----------AI  208 (1039)
T ss_pred             EEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec-c-chhhHHhhhcccchHHHHHhhccc----------cc
Confidence            79999998743336789999999999999999999999997 4 566799999999999999986221          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.-..+..|+.||+.||.||.+++  ++||||..+|+++.+
T Consensus       209 llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllas  247 (1039)
T KOG0199|consen  209 LLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLAS  247 (1039)
T ss_pred             eeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecc
Confidence            344455899999999999999999  999999999999853

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=1.2e-17  Score=110.33  Aligned_cols=106  Identities=26%  Similarity=0.420  Sum_probs=84.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+.... .......+.+|+.+++.++|+||+++++++....    ...++++||+. ++|.+.+...+.       
T Consensus        33 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-------  104 (337)
T cd07858          33 VAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQT-------  104 (337)
T ss_pred             EEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCC-------
Confidence            5788776542 2334456778999999999999999999885222    35789999997 788888765433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       105 -----l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~  143 (337)
T cd07858         105 -----LSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNA  143 (337)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcC
Confidence                 444555999999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG3653|consensus

Probab=99.74  E-value=9.7e-18  Score=112.04  Aligned_cols=105  Identities=24%  Similarity=0.275  Sum_probs=85.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhh--CCCCCccceeeeee---eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKA--LDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++..    ..+.+.+|-++...  ++|+||++++++-.   .....+++|++|.+.|+|.++++.+         
T Consensus       236 VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n---------  302 (534)
T KOG3653|consen  236 VAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN---------  302 (534)
T ss_pred             eEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc---------
Confidence            799999855    56778877777665  58999999999875   1123788999999999999999974         


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcC-------CCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEI-------KPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~-------~~~i~h~dlk~~nill~~~  122 (122)
                          .+.|....+++..+++|+.|||+.       .++|+|||||..|||+..+
T Consensus       303 ----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D  352 (534)
T KOG3653|consen  303 ----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND  352 (534)
T ss_pred             ----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence                334555689999999999999983       3579999999999998653

>KOG2052|consensus

Probab=99.74  E-value=1.2e-17  Score=110.91  Aligned_cols=105  Identities=22%  Similarity=0.310  Sum_probs=85.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC--CCCCccceeeeeeeCCC---eEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL--DHPRVVKLYDVFEIDAN---SFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~--~h~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++...    +.+.+.+|.++.+.+  +|+||+.++++-..+.+   .+++|.+|-+.|+|.++|.. ..+..... 
T Consensus       237 VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~m-  310 (513)
T KOG2052|consen  237 VAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGM-  310 (513)
T ss_pred             eEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHH-
Confidence            799999865    346788888888865  99999999998743333   58999999999999999986 44444444 


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHc------CCCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNE------IKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~------~~~~i~h~dlk~~nill~~~  122 (122)
                                 +.++..++.|+.+||.      ..|.|.|||||..|||+.++
T Consensus       311 -----------l~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn  352 (513)
T KOG2052|consen  311 -----------LKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  352 (513)
T ss_pred             -----------HHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC
Confidence                       8899999999999996      23679999999999998753

>KOG0201|consensus

Probab=99.74  E-value=3.6e-19  Score=117.70  Aligned_cols=106  Identities=22%  Similarity=0.343  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.-...+...+++..|+.++.+++++||..+|+++. .+..++++||||.||++...++....+.+.        
T Consensus        41 vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl-~g~~LwiiMey~~gGsv~~lL~~~~~~~E~--------  111 (467)
T KOG0201|consen   41 VAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL-KGTKLWIIMEYCGGGSVLDLLKSGNILDEF--------  111 (467)
T ss_pred             EEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee-ecccHHHHHHHhcCcchhhhhccCCCCccc--------
Confidence            68999998877777889999999999999999999999998 778889999999999999999865443333        


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+.-++++++.|+.|+|..+  .+|||+|+.||++..
T Consensus       112 ----~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~  146 (467)
T KOG0201|consen  112 ----EIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSE  146 (467)
T ss_pred             ----eeeeehHHHHHHhhhhhhcc--eecccccccceeEec
Confidence                33678999999999999999  999999999999874

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.74  E-value=1.5e-17  Score=107.05  Aligned_cols=107  Identities=28%  Similarity=0.418  Sum_probs=86.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.............+|+..+++++ |+|++.+++.+. ..+..++++||+ +++|.+.+....          ..
T Consensus        27 ~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~l~~~~~~~~----------~~   94 (283)
T cd07830          27 VAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-ENDELYFVFEYM-EGNLYQLMKDRK----------GK   94 (283)
T ss_pred             EEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-cCCcEEEEEecC-CCCHHHHHHhcc----------cc
Confidence            46777765533223344567899999998 999999999998 678889999999 689988887543          12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.++.|||+.+  ++|+||+|+||++++
T Consensus        95 ~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~  134 (283)
T cd07830          95 PFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSG  134 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcC
Confidence            4456667999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.74  E-value=2.1e-17  Score=105.35  Aligned_cols=97  Identities=27%  Similarity=0.506  Sum_probs=81.3

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ....+.+|+.+++.++|||++++++.+. +....++++||+++++|...+.....        ....+.+..++.++.|+
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~l  115 (260)
T cd08222          45 ETVQANQEAQLLSKLDHPAIVKFHASFL-ERDAFCIITEYCEGRDLDCKLEELKH--------TGKTLSENQVCEWFIQL  115 (260)
T ss_pred             hHHHHHHHHHHHHhCCCCcHHHHHHHHh-cCCceEEEEEeCCCCCHHHHHHHHhh--------cccccCHHHHHHHHHHH
Confidence            3445678899999999999999999997 66778899999999999888864211        12356667779999999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|+.|||+.+  ++|+|++|+||++++
T Consensus       116 ~~~l~~lH~~~--i~h~~l~~~nili~~  141 (260)
T cd08222         116 LLGVHYMHQRR--ILHRDLKAKNIFLKN  141 (260)
T ss_pred             HHHHHHHHHcC--ccccCCChhheEeec
Confidence            99999999999  999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.74  E-value=4e-17  Score=106.90  Aligned_cols=106  Identities=22%  Similarity=0.342  Sum_probs=85.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .....+.+.+|+++++.++|+|++.+++++. +....++++||+. |++..++....           
T Consensus        49 v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~-----------  115 (313)
T cd06633          49 VAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-KEHTAWLVMEYCL-GSASDLLEVHK-----------  115 (313)
T ss_pred             EEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-eCCEEEEEEecCC-CCHHHHHHhcC-----------
Confidence            4677776432  2223456788999999999999999999998 6678899999997 67777765421           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.+..+..++.|++.++.|||+.+  ++|+|++|+||+++.
T Consensus       116 ~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~  156 (313)
T cd06633         116 KPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTE  156 (313)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECC
Confidence            23455666899999999999999999  999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.74  E-value=2.6e-17  Score=105.60  Aligned_cols=78  Identities=27%  Similarity=0.403  Sum_probs=69.0

Q ss_pred             CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCee
Q psy4991          29 DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVI  108 (122)
Q Consensus        29 ~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~  108 (122)
                      +|+|++++++.+. ..+..++++||+++++|.+++.....            +.+..++.++.|++.|+.|||+.+  ++
T Consensus        67 ~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~------------l~~~~~~~~~~qi~~~l~~lH~~~--i~  131 (267)
T PHA03390         67 DNPNFIKLYYSVT-TLKGHVLIMDYIKDGDLFDLLKKEGK------------LSEAEVKKIIRQLVEALNDLHKHN--II  131 (267)
T ss_pred             cCCCEEEEEEEEe-cCCeeEEEEEcCCCCcHHHHHHhcCC------------CCHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence            7999999999998 66789999999999999999876433            445555999999999999999999  99


Q ss_pred             eeCCCCCCccccc
Q psy4991         109 HYDLKPGKPLFLF  121 (122)
Q Consensus       109 h~dlk~~nill~~  121 (122)
                      |+||+|+||+++.
T Consensus       132 H~dl~p~nil~~~  144 (267)
T PHA03390        132 HNDIKLENVLYDR  144 (267)
T ss_pred             eCCCCHHHEEEeC
Confidence            9999999999875

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.74  E-value=2.6e-17  Score=108.66  Aligned_cols=105  Identities=30%  Similarity=0.459  Sum_probs=82.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhC-CCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.+... ........+.+|+.+++++ +|+||+++++++.. +....++++||+. ++|...+... .         
T Consensus        35 ~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~---------  103 (337)
T cd07852          35 VALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN-I---------  103 (337)
T ss_pred             EEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC-C---------
Confidence            467777543 2223445677899999999 99999999998852 3346889999998 6888877642 2         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+...+.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       104 ---~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~  142 (337)
T cd07852         104 ---LEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNS  142 (337)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence               233445789999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.74  E-value=1.6e-17  Score=107.98  Aligned_cols=107  Identities=26%  Similarity=0.390  Sum_probs=84.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC---------CeEEEEEeccCCCCHHHHHHhccchh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA---------NSFCTVLEYCDGHDLDFYLKQHKTIA   70 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---------~~~~lv~e~~~~~~L~~~l~~~~~~~   70 (122)
                      ||+|.+.... .......+.+|+++++.++|||++++++.+....         ..+++++||+. +++...+...    
T Consensus        35 v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~----  109 (302)
T cd07864          35 VALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD-HDLMGLLESG----  109 (302)
T ss_pred             EEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccC-ccHHHHHhcC----
Confidence            4778876542 2334467788999999999999999999886222         37889999998 5777666532    


Q ss_pred             HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          71 EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ...+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       110 -------~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~  151 (302)
T cd07864         110 -------LVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNN  151 (302)
T ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence                   124556677999999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.74  E-value=8.9e-18  Score=110.48  Aligned_cols=106  Identities=27%  Similarity=0.431  Sum_probs=86.0

Q ss_pred             CeeeeccCCCC-CcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN-LPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+..... ....+.+.+|+.+++.++|+||+.+.+++....    ...++++||+. ++|.+.+....        
T Consensus        28 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--------   98 (330)
T cd07834          28 VAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ--------   98 (330)
T ss_pred             EEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC--------
Confidence            47787776532 345577889999999999999999999987232    36889999998 68888776533        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        99 ----~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~  138 (330)
T cd07834          99 ----PLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNS  138 (330)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence                3445556899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.73  E-value=3.9e-17  Score=105.80  Aligned_cols=111  Identities=25%  Similarity=0.373  Sum_probs=85.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|...... .......+.+|+.+++.+ +|+|++++++++.....    ..++++||+. ++|.+++......     
T Consensus        29 v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-----  102 (295)
T cd07837          29 VALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGRG-----  102 (295)
T ss_pred             EEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC-cCHHHHHHHhccc-----
Confidence            5778776543 223446788899999999 56999999998862222    3789999998 5888887643211     


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ....+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       103 --~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~  145 (295)
T cd07837         103 --PGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDK  145 (295)
T ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEec
Confidence              1234567778999999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.73  E-value=6.8e-17  Score=103.46  Aligned_cols=96  Identities=26%  Similarity=0.432  Sum_probs=78.9

Q ss_pred             hHHHHHHHHHHhh-CCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKA-LDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        15 ~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ..++..|+.++.+ ++|+|++.+++.+. ..+..++++||+++++|.+++....        .....+.+..++.++.|+
T Consensus        52 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~--------~~~~~~~~~~~~~~~~~l  122 (269)
T cd08528          52 IGDIVSEVTIIKEQLRHPNIVRYYKTFL-ENDRLYIVMDLIEGAPLGEHFNSLK--------EKKQRFTEERIWNIFVQM  122 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCeeeEEeeEc-cCCeEEEEEecCCCCcHHHHHHHHH--------hccCCCCHHHHHHHHHHH
Confidence            4556778887765 69999999999998 6788999999999999998875411        112346667779999999


Q ss_pred             HHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      +.++.|||+ .+  ++|+|++|+||+++.
T Consensus       123 ~~~l~~lh~~~~--i~H~dl~~~nil~~~  149 (269)
T cd08528         123 VLALRYLHKEKR--IVHRDLTPNNIMLGE  149 (269)
T ss_pred             HHHHHHhccCCc--eeecCCCHHHEEECC
Confidence            999999996 67  999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=1.3e-17  Score=115.33  Aligned_cols=97  Identities=19%  Similarity=0.264  Sum_probs=77.0

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ....+.+|+.+++.++|+||+.+++++. ..+..+++++++. +++..++..... ..      ........+..++.|+
T Consensus       206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~-~~------~~~~~~~~~~~i~~ql  276 (501)
T PHA03210        206 AAIQLENEILALGRLNHENILKIEEILR-SEANTYMITQKYD-FDLYSFMYDEAF-DW------KDRPLLKQTRAIMKQL  276 (501)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcEeEEEE-ECCeeEEEEeccc-cCHHHHHhhccc-cc------cccccHHHHHHHHHHH
Confidence            3456789999999999999999999998 6677889999986 677777654211 00      0112244567899999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.||.|||+.+  ++||||||+|||++.
T Consensus       277 ~~aL~yLH~~g--IiHrDLKP~NILl~~  302 (501)
T PHA03210        277 LCAVEYIHDKK--LIHRDIKLENIFLNC  302 (501)
T ss_pred             HHHHHHHHhCC--eecCCCCHHHEEECC
Confidence            99999999999  999999999999974

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.73  E-value=3.3e-17  Score=105.39  Aligned_cols=106  Identities=28%  Similarity=0.484  Sum_probs=86.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+.... .+.....+.+|+.+++.++|+|++.+++.+. .+...++++||+. +++.+++....           .
T Consensus        27 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~l~~~~-----------~   93 (283)
T cd05118          27 VAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-HKGDLYLVFEFMD-TDLYKLIKDRQ-----------R   93 (283)
T ss_pred             EEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-cCCCEEEEEeccC-CCHHHHHHhhc-----------c
Confidence            4677776542 2234577889999999999999999999998 6788899999998 58888776521           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~  133 (283)
T cd05118          94 GLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINT  133 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECC
Confidence            3455666899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.73  E-value=3e-17  Score=105.56  Aligned_cols=106  Identities=34%  Similarity=0.556  Sum_probs=88.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+.... .....+.+..|+.+++.++|+|++.+++.+. +....++++||+. ++|.+++....           .
T Consensus        27 ~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~~i~~~~-----------~   93 (282)
T cd07829          27 VALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-TERKLYLVFEYCD-MDLKKYLDKRP-----------G   93 (282)
T ss_pred             EEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-cCCceEEEecCcC-cCHHHHHHhhc-----------c
Confidence            4677777653 3345577888999999999999999999998 6688899999998 68999887642           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.++.|||+.+  ++|+|++|+||++++
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~  133 (282)
T cd07829          94 PLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINR  133 (282)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcC
Confidence            3455566899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.72  E-value=6.9e-17  Score=105.55  Aligned_cols=106  Identities=21%  Similarity=0.336  Sum_probs=84.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +|+|.+...  ......+++.+|+++++.++|+|++.+.+++. .....++++||+. |++...+....           
T Consensus        43 ~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------  109 (308)
T cd06634          43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCL-GSASDLLEVHK-----------  109 (308)
T ss_pred             EEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-cCCeeEEEEEccC-CCHHHHHHHcC-----------
Confidence            467766543  12234467788999999999999999999998 6678889999997 68877765322           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       110 ~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~  150 (308)
T cd06634         110 KPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSE  150 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECC
Confidence            23455666899999999999999999  999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1025|consensus

Probab=99.72  E-value=4.3e-18  Score=120.20  Aligned_cols=106  Identities=23%  Similarity=0.261  Sum_probs=91.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++....+.+....++.|+-.|.+++|||++++.++|..  +.+.||++|++.|+|.++++.++.           .
T Consensus       728 VaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~--s~~qlvtq~mP~G~LlDyvr~hr~-----------~  794 (1177)
T KOG1025|consen  728 VAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML--STLQLVTQLMPLGCLLDYVREHRD-----------N  794 (1177)
T ss_pred             eEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--chHHHHHHhcccchHHHHHHHhhc-----------c
Confidence            789999988777778999999999999999999999999972  336689999999999999997543           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +-.+..+.|..||+.||.|||.++  ++||||.++|+|+.+
T Consensus       795 igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVks  833 (1177)
T KOG1025|consen  795 IGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKS  833 (1177)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecC
Confidence            333445899999999999999999  999999999999864

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=5.6e-17  Score=107.84  Aligned_cols=96  Identities=20%  Similarity=0.129  Sum_probs=71.1

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      +|||.+....    .....+.+.+|+++++.++|+|++..+..+    +..+++|||+.|++|... ....      .  
T Consensus        47 vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~~~~------~--  113 (365)
T PRK09188         47 RAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEGVPLHLA-RPHG------D--  113 (365)
T ss_pred             EEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCCCCHHHh-Cccc------h--
Confidence            4788765331    122356688999999999999998533222    346899999999888622 1000      0  


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCC-CCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL-KPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dl-k~~nill~~  121 (122)
                                ..++.+++.++.|+|+.+  ++|||| ||+|||++.
T Consensus       114 ----------~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~  147 (365)
T PRK09188        114 ----------PAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGP  147 (365)
T ss_pred             ----------HHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcC
Confidence                      457889999999999999  999999 999999964

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.71  E-value=6.9e-17  Score=106.51  Aligned_cols=106  Identities=25%  Similarity=0.418  Sum_probs=82.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.+.... .....+.+.+|+.+++.+ +|+||+++++.+..   .....+++++++. ++|...+.....       
T Consensus        30 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~-------  101 (332)
T cd07857          30 VAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQP-------  101 (332)
T ss_pred             EEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCC-------
Confidence            5788776542 223456788999999999 69999999987531   2245778889887 789888865433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       102 -----~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~  140 (332)
T cd07857         102 -----LTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNA  140 (332)
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcC
Confidence                 344555899999999999999999  999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.71  E-value=6.6e-17  Score=107.06  Aligned_cols=104  Identities=35%  Similarity=0.504  Sum_probs=82.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-------------CeEEEEEeccCCCCHHHHHHhcc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------------NSFCTVLEYCDGHDLDFYLKQHK   67 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~   67 (122)
                      ||+|.+.... ....+.+.+|++++++++|+||+++++.+....             ...++++||+. ++|.+++... 
T Consensus        33 v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-  109 (342)
T cd07854          33 VAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG-  109 (342)
T ss_pred             EEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC-
Confidence            4677765542 234567888999999999999999998775222             35789999997 6887776531 


Q ss_pred             chhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                  .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       110 ------------~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~  149 (342)
T cd07854         110 ------------PLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINT  149 (342)
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcC
Confidence                        2445566899999999999999999  999999999999963

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4279|consensus

Probab=99.71  E-value=4.4e-17  Score=113.95  Aligned_cols=106  Identities=21%  Similarity=0.296  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHh-ccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ-HKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~   79 (122)
                      +|||.++... ....+.+..|+.+-++++|.|||++.|++. ..+.+-++||-.+||+|..+++. ++++..        
T Consensus       603 IaIKEIpekd-sr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-enGf~kIFMEqVPGGSLSsLLrskWGPlKD--------  672 (1226)
T KOG4279|consen  603 IAIKEIPEKD-SREVQPLHEEIALHSTLRHKNIVRYLGSVS-ENGFFKIFMEQVPGGSLSSLLRSKWGPLKD--------  672 (1226)
T ss_pred             EEeeeccccc-chhhccHHHHHHHHHHHhhHhHHHHhhccC-CCCeEEEEeecCCCCcHHHHHHhccCCCcc--------
Confidence            4788887663 335788999999999999999999999997 67788899999999999999985 344322        


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                        .+..+-.+..||++|+.|||++.  |+|||||-.|+|+.
T Consensus       673 --NEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvN  709 (1226)
T KOG4279|consen  673 --NESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVN  709 (1226)
T ss_pred             --chhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEe
Confidence              22344788999999999999999  99999999999985

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.71  E-value=1.1e-16  Score=103.41  Aligned_cols=110  Identities=25%  Similarity=0.320  Sum_probs=84.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+...........+.+|+.++.++. |+||+++++.+. .....++++||+. +++.++...-..       ....
T Consensus        32 ~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-~~~~~~~~~e~~~-~~l~~l~~~~~~-------~~~~  102 (288)
T cd06616          32 MAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-REGDCWICMELMD-ISLDKFYKYVYE-------VLKS  102 (288)
T ss_pred             EEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-cCCcEEEEEeccc-CCHHHHHHHHHH-------hhcC
Confidence            47887776543445567889999999995 999999999987 6677889999987 566554432100       0113


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      .+++..+..++.|++.|+.|||+. +  ++|+||||+||++++
T Consensus       103 ~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~  143 (288)
T cd06616         103 VIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDR  143 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEcc
Confidence            456677799999999999999975 7  999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.71  E-value=5.7e-17  Score=105.59  Aligned_cols=107  Identities=30%  Similarity=0.409  Sum_probs=82.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      +|+|.+.... .......+.+|+++++.++|+||+.+++.+...       ...+++++||+. +++...+....     
T Consensus        36 ~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~-----  109 (311)
T cd07866          36 VALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPS-----  109 (311)
T ss_pred             EEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhccc-----
Confidence            4677776542 222345678899999999999999999887522       234789999997 56766654321     


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+.+..+..++.|++.++.|||+.+  ++|+|+||+||++++
T Consensus       110 ------~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~  150 (311)
T cd07866         110 ------VKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDN  150 (311)
T ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence                  23556667999999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1290|consensus

Probab=99.70  E-value=6.6e-17  Score=108.62  Aligned_cols=106  Identities=25%  Similarity=0.386  Sum_probs=84.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-----C---CCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccch
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-----H---PRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTI   69 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----h---~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~   69 (122)
                      ||+|+.+..  +-..++.+.||.+|+++.     +   ..||++++.|..   ++..+|||+|++. ..|..++..... 
T Consensus       106 VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLG-dnLLklI~~s~Y-  181 (590)
T KOG1290|consen  106 VALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLG-DNLLKLIKYSNY-  181 (590)
T ss_pred             EEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhh-hHHHHHHHHhCC-
Confidence            688887744  445688899999999982     2   268999999963   4568999999995 788777775432 


Q ss_pred             hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                               ..++...+..+++|++.||.|||.. ++|+|-||||+|||+.
T Consensus       182 ---------rGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  182 ---------RGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVLLC  222 (590)
T ss_pred             ---------CCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceeeee
Confidence                     3445556699999999999999996 5599999999999985

>KOG0986|consensus

Probab=99.70  E-value=6.4e-18  Score=112.78  Aligned_cols=95  Identities=27%  Similarity=0.399  Sum_probs=81.1

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      .....++|-.+|++++.+.||.+-.+|+ +.+.+|+|+..|.||+|.--+...+.          ..+.+..+..|+.+|
T Consensus       228 ge~maLnEk~iL~kV~s~FiVslaYAfe-Tkd~LClVLtlMNGGDLkfHiyn~g~----------~gF~e~ra~FYAAEi  296 (591)
T KOG0986|consen  228 GETMALNEKQILEKVSSPFIVSLAYAFE-TKDALCLVLTLMNGGDLKFHIYNHGN----------PGFDEQRARFYAAEI  296 (591)
T ss_pred             hhHHhhHHHHHHHHhccCcEEEEeeeec-CCCceEEEEEeecCCceeEEeeccCC----------CCCchHHHHHHHHHH
Confidence            3456688999999999999999988888 88999999999999999766655442          233444459999999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +-|+.+||..+  |+.||+||+|||||+
T Consensus       297 ~cGLehlH~~~--iVYRDLKPeNILLDd  322 (591)
T KOG0986|consen  297 ICGLEHLHRRR--IVYRDLKPENILLDD  322 (591)
T ss_pred             HhhHHHHHhcc--eeeccCChhheeecc
Confidence            99999999999  999999999999986

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.70  E-value=1.8e-16  Score=105.15  Aligned_cols=105  Identities=26%  Similarity=0.406  Sum_probs=81.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... +....+.+.+|+.++++++|+||+++++.+...     ....+++++++ +++|...+...        
T Consensus        45 vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--------  115 (345)
T cd07877          45 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--------  115 (345)
T ss_pred             EEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--------
Confidence            5788876542 222346678899999999999999999988522     13467888887 58888776531        


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..++.++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       116 -----~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~  155 (345)
T cd07877         116 -----KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNE  155 (345)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcC
Confidence                 2444556899999999999999999  999999999999975

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.70  E-value=1.2e-16  Score=100.14  Aligned_cols=106  Identities=40%  Similarity=0.571  Sum_probs=88.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|++.........+.+.+|++.+++++|+|++.+.+.+. .....++++||+.+++|..++.....            
T Consensus        17 ~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~l~~e~~~~~~L~~~~~~~~~------------   83 (244)
T smart00220       17 VAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-DEDKLYLVMEYCDGGDLFDLLKKRGR------------   83 (244)
T ss_pred             EEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-eCCEEEEEEeCCCCCCHHHHHHhccC------------
Confidence            47787776533322678899999999999999999999998 56788899999998899998875432            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.+++.++.+||+.+  ++|+|++|+||+++.
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~  122 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDE  122 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECC
Confidence            344556899999999999999999  999999999999975

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1035|consensus

Probab=99.70  E-value=2.7e-17  Score=119.52  Aligned_cols=35  Identities=26%  Similarity=0.473  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          85 SARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        85 ~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..|.++++|++|+.|+|+.|  ++||||||.||++++
T Consensus       698 ~~wrLFreIlEGLaYIH~~g--iIHRDLKP~NIFLd~  732 (1351)
T KOG1035|consen  698 EAWRLFREILEGLAYIHDQG--IIHRDLKPRNIFLDS  732 (1351)
T ss_pred             HHHHHHHHHHHHHHHHHhCc--eeeccCCcceeEEcC
Confidence            45899999999999999999  999999999999985

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.70  E-value=2.9e-16  Score=101.20  Aligned_cols=107  Identities=27%  Similarity=0.466  Sum_probs=83.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeCCCe-----EEEEEeccCCCCHHHHHHhccchhH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDANS-----FCTVLEYCDGHDLDFYLKQHKTIAE   71 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~~~~~   71 (122)
                      +|+|.+.... .......+.+|+.++..+   +|+|++++++.+. ....     .++++||+. ++|.+++.....   
T Consensus        27 ~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~-~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~---  101 (287)
T cd07838          27 VALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCH-GPRTDRELKLTLVFEHVD-QDLATYLSKCPK---  101 (287)
T ss_pred             EEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEe-eccCCCCceeEEEehhcc-cCHHHHHHHccC---
Confidence            5788887542 222345566788777665   6999999999997 4343     889999997 688887765321   


Q ss_pred             HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ..+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       102 -------~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~  142 (287)
T cd07838         102 -------PGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTS  142 (287)
T ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEcc
Confidence                   23566777999999999999999999  999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.70  E-value=3.7e-17  Score=100.39  Aligned_cols=86  Identities=16%  Similarity=0.196  Sum_probs=62.6

Q ss_pred             HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991          19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK   98 (122)
Q Consensus        19 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~   98 (122)
                      .+|++.+..+.++++........ . . .+++|||++++++.........            +....+..++.|++.++.
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~~~~-~-~-~~iVmE~i~g~~l~~~~~~~~~------------~~~~~~~~i~~qi~~~L~  131 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEPILL-K-S-HVLVMEFIGDDGWAAPRLKDAP------------LSESKARELYLQVIQIMR  131 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcEEEe-c-C-CEEEEEEeCCCCCcchhhhcCC------------CCHHHHHHHHHHHHHHHH
Confidence            35999999998877644333222 2 2 3799999997766544322222            334455899999999999


Q ss_pred             HH-HcCCCCeeeeCCCCCCccccc
Q psy4991          99 YL-NEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        99 ~l-h~~~~~i~h~dlk~~nill~~  121 (122)
                      ++ |+.+  ++|||+||+||++++
T Consensus       132 ~l~H~~g--iiHrDlkP~NIli~~  153 (190)
T cd05147         132 ILYQDCR--LVHADLSEYNLLYHD  153 (190)
T ss_pred             HHHHhCC--cccCCCCHHHEEEEC
Confidence            99 6888  999999999999963

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1027|consensus

Probab=99.69  E-value=3.2e-17  Score=115.42  Aligned_cols=105  Identities=26%  Similarity=0.381  Sum_probs=81.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+-..    ...-+.+|+.+|+.- +||||+++|+.-. +.+..|++.|.|. .+|.+++..... .....    .
T Consensus       536 VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~-d~qF~YIalELC~-~sL~dlie~~~~-d~~~~----~  604 (903)
T KOG1027|consen  536 VAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQ-DRQFLYIALELCA-CSLQDLIESSGL-DVEMQ----S  604 (903)
T ss_pred             ehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeecc-CCceEEEEehHhh-hhHHHHHhcccc-chhhc----c
Confidence            566666643    445567999999988 7999999998877 8889999999998 899999987411 10000    0


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .   -..+..+.|++.|+.+||+.+  |+||||||+||||+.
T Consensus       605 ~---i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~  641 (903)
T KOG1027|consen  605 D---IDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISV  641 (903)
T ss_pred             c---ccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEc
Confidence            0   112678999999999999999  999999999999974

>KOG0984|consensus

Probab=99.69  E-value=6e-17  Score=98.93  Aligned_cols=111  Identities=23%  Similarity=0.320  Sum_probs=89.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|.+......+...+.++|+.+..+. ..|.++++||.+. +....+++||.|+ .+|..+-++-        -....
T Consensus        74 mAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-regdvwIcME~M~-tSldkfy~~v--------~~~g~  143 (282)
T KOG0984|consen   74 MAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-REGDVWICMELMD-TSLDKFYRKV--------LKKGG  143 (282)
T ss_pred             EEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh-ccccEEEeHHHhh-hhHHHHHHHH--------HhcCC
Confidence            4788888765555667788899987776 8999999999998 6677889999997 7887665541        11234


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+++..+-.++..++.|+.|||++ ..++|||+||+|||++.+
T Consensus       144 ~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~  185 (282)
T KOG0984|consen  144 TIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYD  185 (282)
T ss_pred             cCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccC
Confidence            567777789999999999999997 559999999999999853

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.69  E-value=2e-16  Score=102.79  Aligned_cols=106  Identities=27%  Similarity=0.345  Sum_probs=82.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.++..........+.+|+.++... .|+||+.+++.+. +....++++||+. +++..++....           .
T Consensus        43 ~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~-~~l~~l~~~~~-----------~  109 (296)
T cd06618          43 MAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-TDSDVFICMELMS-TCLDKLLKRIQ-----------G  109 (296)
T ss_pred             EEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-cCCeEEEEeeccC-cCHHHHHHHhc-----------C
Confidence            5788887653333445667788777666 5999999999998 6778899999986 67777665421           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+ .+  ++|+||+|+||+++.
T Consensus       110 ~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~  150 (296)
T cd06618         110 PIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDA  150 (296)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcC
Confidence            44556668999999999999997 47  999999999999975

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0671|consensus

Probab=99.69  E-value=4.8e-17  Score=106.28  Aligned_cols=106  Identities=24%  Similarity=0.421  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCC-----CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHP-----RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~-----~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|+++.-  .+.+++.+-|+++++++ .+.     .++.+.++|. =.+..|+|+|.+. -++.++++.+..      
T Consensus       117 vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd-yrghiCivfellG-~S~~dFlk~N~y------  186 (415)
T KOG0671|consen  117 VALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD-YRGHICIVFELLG-LSTFDFLKENNY------  186 (415)
T ss_pred             ehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh-ccCceEEEEeccC-hhHHHHhccCCc------
Confidence            577777755  44678888899999999 332     3566666676 6678999999994 799999987544      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                          .+++..++..++.|++.++.|||+.+  ++|-||||+|||+.++
T Consensus       187 ----~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss  228 (415)
T KOG0671|consen  187 ----IPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSS  228 (415)
T ss_pred             ----cccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEecc
Confidence                45666778999999999999999999  9999999999999754

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.68  E-value=1.3e-16  Score=105.65  Aligned_cols=105  Identities=27%  Similarity=0.378  Sum_probs=83.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... +....+.+.+|+.+++.++|+|++.+.+++....     ...++++||+. ++|.+++..         
T Consensus        43 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---------  112 (343)
T cd07851          43 VAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKC---------  112 (343)
T ss_pred             EEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHhc---------
Confidence            5778776542 2334466788999999999999999998875222     23889999995 799888764         


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.|+.|||+.+  ++|+|++|+||+++.
T Consensus       113 ----~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~  153 (343)
T cd07851         113 ----QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNE  153 (343)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECC
Confidence                23455566899999999999999999  999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.68  E-value=9.9e-16  Score=93.90  Aligned_cols=107  Identities=36%  Similarity=0.587  Sum_probs=88.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +++|+..........+.+.+|+..++.++|++++.+++.+. .....++++|++.+++|.+++....           ..
T Consensus        21 ~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~~~~-----------~~   88 (215)
T cd00180          21 VAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-DENHLYLVMEYCEGGSLKDLLKENE-----------GK   88 (215)
T ss_pred             EEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-cCCeEEEEEecCCCCcHHHHHHhcc-----------CC
Confidence            35676665532223577899999999999999999999998 5578889999999999999887531           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.+++.++.+||+.+  ++|+|++|.||+++.
T Consensus        89 ~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~  127 (215)
T cd00180          89 LSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDS  127 (215)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeC
Confidence            445566899999999999999999  999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0665|consensus

Probab=99.68  E-value=4.1e-17  Score=104.70  Aligned_cols=104  Identities=24%  Similarity=0.375  Sum_probs=81.0

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|..... .......+..+|..++..++|+|+++++.+|+...     ...|++||+|. ++|.+.+.-.  +...  
T Consensus        44 v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~e--lDH~--  118 (369)
T KOG0665|consen   44 VAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILME--LDHE--  118 (369)
T ss_pred             eehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHh--cchH--
Confidence            345554433 23456778889999999999999999999997332     25889999997 8888877621  2222  


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                .+..++.|.+.|+.|+|+.+  |+||||||+||++..
T Consensus       119 ----------tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~  153 (369)
T KOG0665|consen  119 ----------TISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNS  153 (369)
T ss_pred             ----------HHHHHHHHHHHHHHHHHhcc--eeecccCcccceecc
Confidence                      23788999999999999999  999999999999864

>KOG0587|consensus

Probab=99.67  E-value=1.2e-15  Score=108.19  Aligned_cols=108  Identities=24%  Similarity=0.354  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      .|+|++....  +..+....|.++++.. .|||++.+||+|.    ..++.+|+|||||.+|+..++++...        
T Consensus        47 aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--------  116 (953)
T KOG0587|consen   47 AAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--------  116 (953)
T ss_pred             eeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc--------
Confidence            4788888773  3457778889999888 7999999999994    34568999999999999999998643        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                        ...+.|..+..++++++.|+.+||...  ++|||+|=.|||++.+
T Consensus       117 --g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e  159 (953)
T KOG0587|consen  117 --GNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTEN  159 (953)
T ss_pred             --ccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEecc
Confidence              245566677899999999999999998  9999999999999853

>KOG0668|consensus

Probab=99.67  E-value=1.1e-16  Score=99.20  Aligned_cols=99  Identities=21%  Similarity=0.392  Sum_probs=79.0

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      .||++++-    -...+.+|+.+|+.+. ||||+.+++...+ ......+++|+..+.+..++-..              
T Consensus        67 ViKiLKPV----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t--------------  128 (338)
T KOG0668|consen   67 VIKILKPV----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT--------------  128 (338)
T ss_pred             EEeeechH----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh--------------
Confidence            46666654    3467899999999995 9999999999861 23456789999998777665432              


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +....+..++.+++.++.|+|+.|  |+|||+||.|++++.
T Consensus       129 -l~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh  167 (338)
T KOG0668|consen  129 -LTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDH  167 (338)
T ss_pred             -hchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeech
Confidence             233344889999999999999999  999999999999985

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.67  E-value=4.5e-16  Score=103.09  Aligned_cols=104  Identities=30%  Similarity=0.491  Sum_probs=80.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|.+.... .......+.+|+.+++.++|+||+.+++++....     ...++++||+. .++.....          
T Consensus        43 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----------  111 (342)
T cd07879          43 VAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG----------  111 (342)
T ss_pred             EEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc----------
Confidence            5788776542 2334567889999999999999999999886221     34689999996 56655432          


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..+..++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       112 ----~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~  152 (342)
T cd07879         112 ----HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNE  152 (342)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence                13445556889999999999999999  999999999999974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.66  E-value=8.9e-16  Score=94.28  Aligned_cols=85  Identities=18%  Similarity=0.138  Sum_probs=62.7

Q ss_pred             HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991          19 LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK   98 (122)
Q Consensus        19 ~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~   98 (122)
                      .+|.+.+.++.++++........ ..  .+++|||++++++.........            +.......++.|++.++.
T Consensus        67 ~~E~~~l~~l~~~~i~~p~~~~~-~~--~~lVmE~~~g~~~~~~~l~~~~------------~~~~~~~~i~~~l~~~l~  131 (190)
T cd05145          67 EKEFRNLKRLYEAGVPVPEPILL-KK--NVLVMEFIGDDGSPAPRLKDVP------------LEEEEAEELYEQVVEQMR  131 (190)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEe-cC--CEEEEEEecCCCchhhhhhhcc------------CCHHHHHHHHHHHHHHHH
Confidence            57889999999988755544443 22  3799999997755332212222            223445889999999999


Q ss_pred             HHHc-CCCCeeeeCCCCCCcccc
Q psy4991          99 YLNE-IKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        99 ~lh~-~~~~i~h~dlk~~nill~  120 (122)
                      ++|+ .|  ++|+|+||+||+++
T Consensus       132 ~lH~~~g--ivHrDlkP~NIll~  152 (190)
T cd05145         132 RLYQEAG--LVHGDLSEYNILYH  152 (190)
T ss_pred             HHHHhCC--EecCCCChhhEEEE
Confidence            9999 89  99999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.66  E-value=1.5e-15  Score=94.53  Aligned_cols=107  Identities=37%  Similarity=0.601  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|++.++.++|+|++.+++.+. .....++++|++.+++|.+++.....           .
T Consensus        27 ~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~-----------~   94 (225)
T smart00221       27 VAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-DPEPLYLVMEYCEGGDLFDYLRKKGG-----------K   94 (225)
T ss_pred             EEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-cCCceEEEEeccCCCCHHHHHHhccc-----------C
Confidence            46777775532224678889999999999999999999987 66778899999998899998876432           0


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.+++.++.++|+.+  ++|+|++|+||+++.
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~  133 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGM  133 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence            344555899999999999999998  999999999999874

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0669|consensus

Probab=99.65  E-value=7.2e-17  Score=101.31  Aligned_cols=103  Identities=28%  Similarity=0.502  Sum_probs=84.7

Q ss_pred             eccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-------CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           5 LLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-------DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         5 ~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ++..+.+++.....++|+.+|+.++|+|++.++..|.+       ....+|+||++|+ .+|.-++...           
T Consensus        50 vlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~-----------  117 (376)
T KOG0669|consen   50 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNR-----------  117 (376)
T ss_pred             HHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCc-----------
Confidence            33445677889999999999999999999999988841       1235899999998 7888777542           


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..+..++.++..|+.|+|...  ++|||+||+|+|++.
T Consensus       118 ~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~  159 (376)
T KOG0669|consen  118 KVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITK  159 (376)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcC
Confidence            134556677999999999999999999  999999999999986

>KOG0603|consensus

Probab=99.64  E-value=5.1e-16  Score=106.72  Aligned_cols=98  Identities=33%  Similarity=0.508  Sum_probs=76.9

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      |||++.+.     ..+..+|+.++... +|+|++++.+.+. ++...|+|||.+.++.+...+...+...          
T Consensus       351 ~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v~~-~~~~~~~v~e~l~g~ell~ri~~~~~~~----------  414 (612)
T KOG0603|consen  351 AVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDVYE-DGKEIYLVMELLDGGELLRRIRSKPEFC----------  414 (612)
T ss_pred             hheecccc-----ccccccccchhhhhcCCCcceeecceec-CCceeeeeehhccccHHHHHHHhcchhH----------
Confidence            45555544     12344577666666 8999999999998 8889999999999888877665433322          


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                         ..+..|+.+++.++.|||++|  ++||||||+|||++
T Consensus       415 ---~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~  449 (612)
T KOG0603|consen  415 ---SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLD  449 (612)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeec
Confidence               223679999999999999999  99999999999994

>KOG0696|consensus

Probab=99.63  E-value=1.3e-16  Score=106.09  Aligned_cols=106  Identities=21%  Similarity=0.259  Sum_probs=91.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|||+++++.  ..++.+-.+.|-++|+.. +-|.++++..+|+ +.+.+|+||||+.||+|.--+..-+.+.+..+   
T Consensus       377 yAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-TmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~A---  452 (683)
T KOG0696|consen  377 YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVA---  452 (683)
T ss_pred             hhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-hhhheeeEEEEecCchhhhHHHHhcccCCchh---
Confidence            5899999872  445677788999999888 6788999999888 88899999999999999877776666555555   


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               ..++.+|+-|+=|||+++  |+.||||..|+|++.
T Consensus       453 ---------vFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~  485 (683)
T KOG0696|consen  453 ---------VFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDS  485 (683)
T ss_pred             ---------hhhhHHHHHHhhhhhcCC--eeeeeccccceEecc
Confidence                     899999999999999999  999999999999985

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.63  E-value=1.5e-15  Score=95.20  Aligned_cols=99  Identities=12%  Similarity=0.214  Sum_probs=75.0

Q ss_pred             CeeeeccCCCCCc--chHH------HHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHh
Q psy4991           1 MCAKLLTTNLNLP--FPRH------ALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQ   65 (122)
Q Consensus         1 vavK~~~~~~~~~--~~~~------~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~   65 (122)
                      +|+|++.......  ..+.      +.+|+..+.++.|++|..+...+...       ....+++|||++|.+|.+....
T Consensus        57 ~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~  136 (232)
T PRK10359         57 YILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI  136 (232)
T ss_pred             EEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc
Confidence            5788887653221  2222      57899999999999999998886422       1357899999999899776321


Q ss_pred             ccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          66 HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .                    .....+++.++..+|+.|  ++|+|++|+||++++
T Consensus       137 ~--------------------~~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~  170 (232)
T PRK10359        137 S--------------------EDVKAKIKASIESLHQHG--MVSGDPHKGNFIVSK  170 (232)
T ss_pred             c--------------------HHHHHHHHHHHHHHHHcC--CccCCCChHHEEEeC
Confidence            0                    234568999999999999  999999999999975

>KOG1152|consensus

Probab=99.62  E-value=6.1e-16  Score=106.01  Aligned_cols=106  Identities=25%  Similarity=0.346  Sum_probs=85.7

Q ss_pred             CeeeeccCC-------CCCcchHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEecc-CCCCHHHHHHhccch
Q psy4991           1 MCAKLLTTN-------LNLPFPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYC-DGHDLDFYLKQHKTI   69 (122)
Q Consensus         1 vavK~~~~~-------~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~   69 (122)
                      |.+|.+.+.       ......-..-.|+++|..++   |+||+++.+.|+ +.+.+|+++|-- ++-+|.+++.....+
T Consensus       589 VViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE-ddd~yyl~te~hg~gIDLFd~IE~kp~m  667 (772)
T KOG1152|consen  589 VVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE-DDDYYYLETEVHGEGIDLFDFIEFKPRM  667 (772)
T ss_pred             EEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee-cCCeeEEEecCCCCCcchhhhhhccCcc
Confidence            456777654       11222334456999999997   999999999999 888999999975 467889998876665


Q ss_pred             hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..+            ..++.|++.|+++||+++  |+|||||-+|+.++.
T Consensus       668 ~E~eA------------k~IFkQV~agi~hlh~~~--ivhrdikdenvivd~  705 (772)
T KOG1152|consen  668 DEPEA------------KLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDS  705 (772)
T ss_pred             chHHH------------HHHHHHHHhccccccccC--ceecccccccEEEec
Confidence            55555            899999999999999999  999999999999875

>KOG1345|consensus

Probab=99.61  E-value=5.6e-16  Score=98.10  Aligned_cols=103  Identities=20%  Similarity=0.340  Sum_probs=81.0

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ++|..+..  ..-..+|.+|-..---+ -|.||+.-|+...++.+...+++||++.|+|.+-+...+ ..+...      
T Consensus        53 vlKavp~p--~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~------  123 (378)
T KOG1345|consen   53 VLKAVPRP--QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANT------  123 (378)
T ss_pred             EeeccCcc--hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHH------
Confidence            45555544  23457788888766566 589999998887657778889999999999988776533 333333      


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..++.|+++++.|||+++  ++|||||.+|||+-+
T Consensus       124 ------K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~  156 (378)
T KOG1345|consen  124 ------KKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFD  156 (378)
T ss_pred             ------HHHHHHHHHHHHHhhccc--hhhcccccceEEEec
Confidence                  789999999999999999  999999999999853

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.59  E-value=1.2e-14  Score=100.48  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=72.3

Q ss_pred             HHHHHHHHHhhCCCCCc-----cceeeeeee-------CCCeEEEEEeccCCCCHHHHHHhccc-----hhHHh------
Q psy4991          17 HALREYNIHKALDHPRV-----VKLYDVFEI-------DANSFCTVLEYCDGHDLDFYLKQHKT-----IAERE------   73 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i-----~~~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~------   73 (122)
                      ....|+.++.+++|.++     +.+.++|..       ..+..++|+||+++++|.+++.....     +....      
T Consensus       218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l  297 (507)
T PLN03224        218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI  297 (507)
T ss_pred             hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence            34457777777766554     555565531       13457899999999999999875321     11100      


Q ss_pred             -hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 -ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .......+.+..+..++.|++.++.|+|+.+  ++|||+||+||+++.
T Consensus       298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~  344 (507)
T PLN03224        298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTV  344 (507)
T ss_pred             hhhcccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECC
Confidence             0011123456778899999999999999999  999999999999875

>KOG0596|consensus

Probab=99.58  E-value=9.4e-15  Score=99.75  Aligned_cols=96  Identities=24%  Similarity=0.265  Sum_probs=80.8

Q ss_pred             CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991          11 NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI   89 (122)
Q Consensus        11 ~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (122)
                      +......+.+|+.+|.++ .|.+|++++++-. ..+.+|||||+=+ .+|...+.....           ..+...+..+
T Consensus       399 D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-~d~~lYmvmE~Gd-~DL~kiL~k~~~-----------~~~~~~lk~y  465 (677)
T KOG0596|consen  399 DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-TDGYLYMVMECGD-IDLNKILKKKKS-----------IDPDWFLKFY  465 (677)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-cCceEEEEeeccc-ccHHHHHHhccC-----------CCchHHHHHH
Confidence            344567889999999999 6999999999887 6789999999776 899999986432           2222356889


Q ss_pred             HHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..|++.++.++|+.|  |+|.||||.|+|+.+
T Consensus       466 wkqML~aV~~IH~~g--IVHSDLKPANFLlVk  495 (677)
T KOG0596|consen  466 WKQMLLAVKTIHQHG--IVHSDLKPANFLLVK  495 (677)
T ss_pred             HHHHHHHHHHHHHhc--eeecCCCcccEEEEe
Confidence            999999999999999  999999999999864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.57  E-value=3.1e-14  Score=88.52  Aligned_cols=86  Identities=20%  Similarity=0.247  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      ..+.+|+.++..+.|+++......+. .....+++|||++|++|.+.+.....                ....++.+++.
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e~~~G~~L~~~~~~~~~----------------~~~~i~~~i~~  106 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYFV-DPENFIIVMEYIEGEPLKDLINSNGM----------------EELELSREIGR  106 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEEE-eCCCCEEEEEEeCCcCHHHHHHhccH----------------HHHHHHHHHHH
Confidence            45778999999999998877776665 44567799999999999988764221                23788999999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ++.++|+.+  ++|+|++|+||+++
T Consensus       107 ~l~~lH~~~--i~H~Dl~p~Nil~~  129 (211)
T PRK14879        107 LVGKLHSAG--IIHGDLTTSNMILS  129 (211)
T ss_pred             HHHHHHhCC--cccCCCCcccEEEE
Confidence            999999999  99999999999985

>KOG0983|consensus

Probab=99.57  E-value=1.5e-15  Score=96.32  Aligned_cols=108  Identities=22%  Similarity=0.272  Sum_probs=84.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|||.+....+...-.+++..+.++.+. +.|.||+++|+|. ....++++||.|. ..+..+++.-           ..
T Consensus       120 iAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-~n~dV~IcMelMs-~C~ekLlkri-----------k~  186 (391)
T KOG0983|consen  120 IAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-TNTDVFICMELMS-TCAEKLLKRI-----------KG  186 (391)
T ss_pred             EEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-eCchHHHHHHHHH-HHHHHHHHHh-----------cC
Confidence            4899998886666677888888877776 5899999999998 5556778999886 4555555432           23


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      ++++..+-.+...++.++.||-.+ ..++|||+||+|||+|++
T Consensus       187 piPE~ilGk~tva~v~AL~YLKeK-H~viHRDvKPSNILlDe~  228 (391)
T KOG0983|consen  187 PIPERILGKMTVAIVKALYYLKEK-HGVIHRDVKPSNILLDER  228 (391)
T ss_pred             CchHHhhhhhHHHHHHHHHHHHHh-cceeecccCccceEEccC
Confidence            456666678899999999999886 449999999999999863

>KOG1006|consensus

Probab=99.57  E-value=6.5e-16  Score=97.50  Aligned_cols=112  Identities=24%  Similarity=0.274  Sum_probs=85.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|||.+.....+...++++.|.+...+- +.|||+++||++. +.+..|++||.|. .++..+-+.-....       ..
T Consensus        92 mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F-~EGdcWiCMELMd-~SlDklYk~vy~vq-------~~  162 (361)
T KOG1006|consen   92 MAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF-SEGDCWICMELMD-ISLDKLYKRVYSVQ-------KS  162 (361)
T ss_pred             EEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh-cCCceeeeHHHHh-hhHHHHHHHHHHHH-------hc
Confidence            5899998876666778888888866665 7899999999998 6677889999997 77765544311110       12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+++..+-.+....+.++.||-.. ..++|||+||+|||+++.
T Consensus       163 ~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~  204 (361)
T KOG1006|consen  163 RIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRH  204 (361)
T ss_pred             cCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecC
Confidence            445555567778888999999775 449999999999999863

>KOG0695|consensus

Probab=99.56  E-value=5.6e-15  Score=96.38  Aligned_cols=106  Identities=25%  Similarity=0.364  Sum_probs=86.3

Q ss_pred             CeeeeccCCC-CC-cchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NL-PFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|++++.. +. .+..=...|-.+..+. +||.++.+..+|+ +...+++|.||.+||+|.--+...+.+++..+   
T Consensus       278 yamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq-tesrlffvieyv~ggdlmfhmqrqrklpeeha---  353 (593)
T KOG0695|consen  278 YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---  353 (593)
T ss_pred             eehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc-ccceEEEEEEEecCcceeeehhhhhcCcHHHh---
Confidence            4778887652 11 1223334677777777 7999999999998 77788899999999999888877766666666   


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               ..+..+|+.++.|||+.|  |+.||||..|+|++.
T Consensus       354 ---------rfys~ei~lal~flh~rg--iiyrdlkldnvllda  386 (593)
T KOG0695|consen  354 ---------RFYSAEICLALNFLHERG--IIYRDLKLDNVLLDA  386 (593)
T ss_pred             ---------hhhhHHHHHHHHHHhhcC--eeeeeccccceEEcc
Confidence                     889999999999999999  999999999999974

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.53  E-value=4.8e-14  Score=98.48  Aligned_cols=83  Identities=19%  Similarity=0.178  Sum_probs=70.9

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      .+.+.+|++++..++|++++.....+. +....+++|||+++++|.+++..        .            ..++.+++
T Consensus       380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~E~~~g~~L~~~l~~--------~------------~~~~~~i~  438 (535)
T PRK09605        380 TERTRAEARLLSEARRAGVPTPVIYDV-DPEEKTIVMEYIGGKDLKDVLEG--------N------------PELVRKVG  438 (535)
T ss_pred             HHHHHHHHHHHHhhcccCCCeeEEEEE-eCCCCEEEEEecCCCcHHHHHHH--------H------------HHHHHHHH
Confidence            356789999999999999988776665 44556799999999999888752        1            57899999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .++.++|+.+  ++|||+||+||+++
T Consensus       439 ~~L~~lH~~g--iiHrDlkp~NILl~  462 (535)
T PRK09605        439 EIVAKLHKAG--IVHGDLTTSNFIVR  462 (535)
T ss_pred             HHHHHHHhCC--CccCCCChHHEEEE
Confidence            9999999999  99999999999984

>KOG0664|consensus

Probab=99.53  E-value=2.7e-16  Score=99.89  Aligned_cols=94  Identities=23%  Similarity=0.404  Sum_probs=73.8

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI   89 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (122)
                      ...++.+|+.+|..++|.|+++..+..+...    ..+|++.|.|. .+|..++-..            +.+..+.+.-+
T Consensus        95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSP------------Q~Ls~DHvKVF  161 (449)
T KOG0664|consen   95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSP------------QALTPDHVKVF  161 (449)
T ss_pred             HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccC------------CCCCcchhhhh
Confidence            4577889999999999999999998875111    13566777776 5666555443            34555566899


Q ss_pred             HHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+||++|+.|||+.+  |+||||||.|+|++++
T Consensus       162 lYQILRGLKYLHsA~--ILHRDIKPGNLLVNSN  192 (449)
T KOG0664|consen  162 VYQILRGLKYLHTAN--ILHRDIKPGNLLVNSN  192 (449)
T ss_pred             HHHHHhhhHHHhhcc--hhhccCCCccEEeccC
Confidence            999999999999999  9999999999998764

>KOG1167|consensus

Probab=99.53  E-value=9e-14  Score=91.93  Aligned_cols=100  Identities=20%  Similarity=0.310  Sum_probs=82.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+...   ....++.+|+++|..+ .+.||+.+.+++. ..+...+|+||++..+..++...-             
T Consensus        67 valk~i~~t---s~p~ri~~El~~L~~~gG~~ni~~~~~~~r-nnd~v~ivlp~~~H~~f~~l~~~l-------------  129 (418)
T KOG1167|consen   67 VALKAIYRT---SSPSRILNELEMLYRLGGSDNIIKLNGCFR-NNDQVAIVLPYFEHDRFRDLYRSL-------------  129 (418)
T ss_pred             Eeeeecccc---cCchHHHHHHHHHHHhccchhhhcchhhhc-cCCeeEEEecccCccCHHHHHhcC-------------
Confidence            466666544   2457899999999999 6899999999998 778889999999988877776542             


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ....+..+++.+..+|.++|.+|  |+|||+||+|++.+.
T Consensus       130 --~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~  167 (418)
T KOG1167|consen  130 --SLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNR  167 (418)
T ss_pred             --CHHHHHHHHHHHHHHhhhhhccC--ccccCCCcccccccc
Confidence              22344889999999999999999  999999999999763

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.53  E-value=1.2e-13  Score=85.15  Aligned_cols=83  Identities=14%  Similarity=0.177  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      .++.+|++++..+.++++......+. .....+++|||++|++|.+.+....                   ..++.+++.
T Consensus        42 ~~~~~E~~~l~~l~~~~i~~p~~~~~-~~~~~~lv~e~~~g~~l~~~~~~~~-------------------~~~~~~i~~  101 (199)
T TIGR03724        42 ERTRNEARLLSRARKAGVNTPVVYDV-DPDNKTIVMEYIEGKPLKDVIEEGN-------------------DELLREIGR  101 (199)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEE-ECCCCEEEEEEECCccHHHHHhhcH-------------------HHHHHHHHH
Confidence            55678999999998877655544444 3445679999999999988765421                   157889999


Q ss_pred             HHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ++.++|+.+  ++|+|++|+||+++
T Consensus       102 ~l~~lH~~g--i~H~Dl~~~Nil~~  124 (199)
T TIGR03724       102 LVGKLHKAG--IVHGDLTTSNIIVR  124 (199)
T ss_pred             HHHHHHHCC--eecCCCCcceEEEE
Confidence            999999999  99999999999985

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0670|consensus

Probab=99.52  E-value=3.5e-14  Score=96.73  Aligned_cols=107  Identities=27%  Similarity=0.371  Sum_probs=87.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC------CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD------HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++..+  +.....=++|+++|.++.      --+++.++..|. -.+.+|||+|.+. -.|...++.-+.      
T Consensus       460 vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~-hknHLClVFE~Ls-lNLRevLKKyG~------  529 (752)
T KOG0670|consen  460 VAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK-HKNHLCLVFEPLS-LNLREVLKKYGR------  529 (752)
T ss_pred             eEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh-hcceeEEEehhhh-chHHHHHHHhCc------
Confidence            799999988  444556678999999984      237889999998 7789999999997 899999987543      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                         --.+....+..|+.|+..+|..|-.++  ++|.||||.|||+.++
T Consensus       530 ---nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~  572 (752)
T KOG0670|consen  530 ---NVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNES  572 (752)
T ss_pred             ---ccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccC
Confidence               123444556899999999999999999  9999999999999753

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.49  E-value=2.6e-13  Score=84.01  Aligned_cols=79  Identities=23%  Similarity=0.141  Sum_probs=62.7

Q ss_pred             HHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          17 HALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        17 ~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      .+.+|+++|+++. +++++.++++     ...+++|||+.|.+|.+.... .      .            ..++.|++.
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvmeyI~G~~L~~~~~~-~------~------------~~~~~qi~~  102 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW-----DGRHLDRSYLAGAAMYQRPPR-G------D------------LAYFRAARR  102 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEeeecCccHHhhhhh-h------h------------HHHHHHHHH
Confidence            5789999999994 5788888774     225799999998888643321 0      1            356789999


Q ss_pred             HHHHHHcCCCCeeeeCC-CCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDL-KPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dl-k~~nill~~  121 (122)
                      ++.++|+.|  ++|+|| ||+||+++.
T Consensus       103 ~L~~lH~~G--IvHrDL~kp~NILv~~  127 (218)
T PRK12274        103 LLQQLHRCG--VAHNDLAKEANWLVQE  127 (218)
T ss_pred             HHHHHHHCc--CccCCCCCcceEEEcC
Confidence            999999999  999999 799999964

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.49  E-value=1.5e-13  Score=87.22  Aligned_cols=88  Identities=15%  Similarity=0.152  Sum_probs=65.7

Q ss_pred             hHHHHHHHHHHhhCCCCCc--cceeeeeeeCCC---eEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRV--VKLYDVFEIDAN---SFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARS   88 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i--~~~~~~~~~~~~---~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   88 (122)
                      ...+.+|++++..+.|+++  +..++.......   ..++++|+++| .+|.+++... ..            .    ..
T Consensus        84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l------------~----~~  146 (239)
T PRK01723         84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-PL------------S----EE  146 (239)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-CC------------C----HH
Confidence            4567889999999988775  566665432222   23589999996 6888877532 11            1    23


Q ss_pred             HHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          89 IVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        89 ~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+++.++.+||+.|  ++|+|+||+|||++.
T Consensus       147 ~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~  177 (239)
T PRK01723        147 QWQAIGQLIARFHDAG--VYHADLNAHNILLDP  177 (239)
T ss_pred             HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcC
Confidence            4678999999999999  999999999999974

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.48  E-value=4e-13  Score=87.39  Aligned_cols=84  Identities=19%  Similarity=0.200  Sum_probs=61.6

Q ss_pred             HHHhhCCCCCccceeeeeeeCCC---eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991          23 NIHKALDHPRVVKLYDVFEIDAN---SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY   99 (122)
Q Consensus        23 ~~l~~~~h~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   99 (122)
                      ..+..++|++++.+++++.....   ..+++++++. .++...+.....            .++..+..++.|++.|+.|
T Consensus        75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~i~~qi~~~l~~  141 (294)
T PHA02882         75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC------------KNKKLIKNIMKDMLTTLEY  141 (294)
T ss_pred             HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhcc------------CCHHHHHHHHHHHHHHHHH
Confidence            34556789999999997752222   3456777765 566655543221            2344558899999999999


Q ss_pred             HHcCCCCeeeeCCCCCCccccc
Q psy4991         100 LNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       100 lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ||+.+  ++||||||+|||++.
T Consensus       142 lH~~~--iiHrDiKp~Nill~~  161 (294)
T PHA02882        142 IHEHG--ISHGDIKPENIMVDG  161 (294)
T ss_pred             HHhCC--eecCCCCHHHEEEcC
Confidence            99999  999999999999974

>KOG0576|consensus

Probab=99.48  E-value=7.7e-15  Score=101.96  Aligned_cols=104  Identities=18%  Similarity=0.278  Sum_probs=83.5

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |+|+++-..+. ...-...|+-+++.++|+||+.+++.+. ....++++||||.+|+|.++-.-.+.+            
T Consensus        44 avkvVkLep~d-d~~~iqqei~~~~dc~h~nivay~gsyl-r~dklwicMEycgggslQdiy~~Tgpl------------  109 (829)
T KOG0576|consen   44 AVKVVKLEPGD-DFSGIQQEIGMLRDCRHPNIVAYFGSYL-RRDKLWICMEYCGGGSLQDIYHVTGPL------------  109 (829)
T ss_pred             hheeeeccCCc-cccccccceeeeecCCCcChHHHHhhhh-hhcCcEEEEEecCCCcccceeeecccc------------
Confidence            67777655222 3455567888899999999999999998 667788999999999998765433333            


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.++-...+..++|+.|+|+.+  -+|||+|=.||++++
T Consensus       110 selqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd  147 (829)
T KOG0576|consen  110 SELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTD  147 (829)
T ss_pred             hhHHHHHHHhhhhccchhhhcCC--cccccccccceeecc
Confidence            34455788999999999999999  999999999999975

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.44  E-value=2e-12  Score=83.59  Aligned_cols=109  Identities=38%  Similarity=0.550  Sum_probs=87.5

Q ss_pred             CeeeeccCCCCCc--chHHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLP--FPRHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~--~~~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      +|+|.+.......  ..+.+.+|+..++.+.|+ +++.+...+. .....+++++++.++++..++......        
T Consensus        25 ~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--------   95 (384)
T COG0515          25 VALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-DEGSLYLVMEYVDGGSLEDLLKKIGRK--------   95 (384)
T ss_pred             EEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-cCCEEEEEEecCCCCcHHHHHHhcccc--------
Confidence            3677777664333  478899999999999888 7999999996 666678999999999999666653210        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ..+.+.....++.|++.++.++|..+  ++|||+||+||+++.
T Consensus        96 -~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~  136 (384)
T COG0515          96 -GPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDR  136 (384)
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecC
Confidence             23445556899999999999999999  999999999999874

>KOG1024|consensus

Probab=99.41  E-value=7.5e-13  Score=87.80  Aligned_cols=113  Identities=16%  Similarity=0.090  Sum_probs=91.2

Q ss_pred             eeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCC
Q psy4991           3 AKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYL   82 (122)
Q Consensus         3 vK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~   82 (122)
                      +|..++..++-....++.|.-++..+.|||+.++.+++..+....++++.++.-|+|..|+...+......+    +.+.
T Consensus       319 vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~a----qtvt  394 (563)
T KOG1024|consen  319 VKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYA----QTVT  394 (563)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccc----cchh
Confidence            455555555556677788888888999999999999997677788889999999999999986654332222    3444


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          83 STSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        83 ~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      --+...++.|++.|+.|||..+  ++|.||..+|.++++
T Consensus       395 t~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  395 TIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDD  431 (563)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehh
Confidence            4567899999999999999999  999999999999975

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.40  E-value=1.2e-12  Score=92.08  Aligned_cols=77  Identities=17%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             CCCeEEEEEeccCCCCHHHHHHhccch-h--HHhhh----h-cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCC
Q psy4991          43 DANSFCTVLEYCDGHDLDFYLKQHKTI-A--EREAR----C-LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP  114 (122)
Q Consensus        43 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-~--~~~~~----~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~  114 (122)
                      .....++++||+.+++|.+++...... .  .....    . .........+..++.|++.|+.|||+.+  |+||||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP  283 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKP  283 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCH
Confidence            456788999999999999998753211 0  00000    0 0001123456689999999999999999  99999999


Q ss_pred             CCccccc
Q psy4991         115 GKPLFLF  121 (122)
Q Consensus       115 ~nill~~  121 (122)
                      +|||++.
T Consensus       284 ~NILl~~  290 (566)
T PLN03225        284 QNIIFSE  290 (566)
T ss_pred             HHEEEeC
Confidence            9999974

>smart00090 RIO RIO-like kinase

Probab=99.39  E-value=1.3e-12  Score=82.89  Aligned_cols=87  Identities=15%  Similarity=0.098  Sum_probs=60.1

Q ss_pred             HHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991          18 ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL   97 (122)
Q Consensus        18 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l   97 (122)
                      +.+|++++..+.+.. +.+...+. .. ..+++|||++++++..........            .......++.|++.++
T Consensus        97 ~~~E~~~L~~L~~~~-i~~p~~~~-~~-~~~lV~E~~~g~~L~~~~~~~~~~------------~~~~~~~i~~qi~~~l  161 (237)
T smart00090       97 AEKEFRNLQRLYEAG-VPVPKPIA-WR-RNVLVMEFIGGDGLPAPRLKDVEP------------EEEEEFELYDDILEEM  161 (237)
T ss_pred             HHHHHHHHHHHHhcC-CCCCeeeE-ec-CceEEEEEecCCcccccccccCCc------------chHHHHHHHHHHHHHH
Confidence            468999999996532 22222232 11 246999999987776543222211            2233478899999999


Q ss_pred             HHHHcCCCCeeeeCCCCCCcccc
Q psy4991          98 KYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        98 ~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .++|+.+ .++|+|+||+||+++
T Consensus       162 ~~LH~~g-~iiH~Dikp~NIli~  183 (237)
T smart00090      162 RKLYKEG-ELVHGDLSEYNILVH  183 (237)
T ss_pred             HHHHhcC-CEEeCCCChhhEEEE
Confidence            9999973 499999999999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.37  E-value=2.5e-13  Score=98.62  Aligned_cols=81  Identities=19%  Similarity=0.225  Sum_probs=61.9

Q ss_pred             hhCCC-CCccceeeeeee------CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991          26 KALDH-PRVVKLYDVFEI------DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK   98 (122)
Q Consensus        26 ~~~~h-~~i~~~~~~~~~------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~   98 (122)
                      +..+| +||..+.+.+..      ....++.++||+. ++|.+++....           ..+.+..++.++.|++.||.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~-----------~~~~~~~~~~i~~qi~~al~   94 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD-----------RSVDAFECFHVFRQIVEIVN   94 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc-----------ccccHHHHHHHHHHHHHHHH
Confidence            44556 577777777721      1235667888885 79999986421           23555666999999999999


Q ss_pred             HHHcCCCCeeeeCCCCCCcccc
Q psy4991          99 YLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        99 ~lh~~~~~i~h~dlk~~nill~  120 (122)
                      |||+++  |+||||||+|||++
T Consensus        95 ~lH~~g--IvHrDlKP~NiLl~  114 (793)
T PLN00181         95 AAHSQG--IVVHNVRPSCFVMS  114 (793)
T ss_pred             HHHhCC--eeeccCCchhEEEc
Confidence            999999  99999999999995

>KOG1163|consensus

Probab=99.37  E-value=5.4e-12  Score=79.19  Aligned_cols=102  Identities=16%  Similarity=0.201  Sum_probs=78.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|+-+....   ...+..|..+...++ ...|..+..+.. +...-.+||+.+. .+|.+++..+..           
T Consensus        43 VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~-e~~ynvlVMdLLG-PsLEdLfnfC~R-----------  106 (341)
T KOG1163|consen   43 VAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGT-EKDYNVLVMDLLG-PSLEDLFNFCSR-----------  106 (341)
T ss_pred             EEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhcc-ccccceeeeeccC-ccHHHHHHHHhh-----------
Confidence            67887665532   244677888888885 457777777776 6666779999985 899998876422           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .+.-+.++.++.|++.-++|+|..+  ++||||||+|+|..
T Consensus       107 ~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMG  145 (341)
T KOG1163|consen  107 RFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMG  145 (341)
T ss_pred             hhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeec
Confidence            2333445999999999999999999  99999999999874

>KOG1164|consensus

Probab=99.37  E-value=5.3e-12  Score=83.32  Aligned_cols=106  Identities=21%  Similarity=0.165  Sum_probs=79.1

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCC----CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALD----HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~----h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      |+|+.......... .+..|..++..+.    ..++..+++........-++||+.+. .+|.++.....          
T Consensus        48 a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G-~sL~dl~~~~~----------  115 (322)
T KOG1164|consen   48 AKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLG-PSLEDLRKRNP----------  115 (322)
T ss_pred             EEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccC-ccHHHHHHhCC----------
Confidence            56666554222222 6778888888886    25888888877325667789999885 89999876533          


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+....+..++.|++.++.++|+.|  ++|||+||+|+.+..
T Consensus       116 ~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~  157 (322)
T KOG1164|consen  116 PGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQ  157 (322)
T ss_pred             CCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecC
Confidence            133444555999999999999999999  999999999999864

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.35  E-value=2.6e-12  Score=79.32  Aligned_cols=80  Identities=25%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             HHHHHHHHHhhCCCCC--ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          17 HALREYNIHKALDHPR--VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~--i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ...+|..++..+.+++  ++.+++     ....+++|||+++++|......                  .....++.+++
T Consensus        79 ~~~~E~~~l~~l~~~~i~v~~~~~-----~~~~~lv~e~~~g~~L~~~~~~------------------~~~~~~~~~i~  135 (198)
T cd05144          79 AAQKEFAALKALYEEGFPVPKPID-----WNRHAVVMEYIDGVELYRVRVL------------------EDPEEVLDEIL  135 (198)
T ss_pred             HHHHHHHHHHHHHHcCCCCCceee-----cCCceEEEEEeCCcchhhcccc------------------ccHHHHHHHHH
Confidence            3567888888887764  333333     2334799999999888654321                  11256788999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.++|+.+  ++|+|++|+||+++.
T Consensus       136 ~~l~~lh~~g--i~H~Dl~p~Nill~~  160 (198)
T cd05144         136 EEIVKAYKHG--IIHGDLSEFNILVDD  160 (198)
T ss_pred             HHHHHHHHCC--CCcCCCCcccEEEcC
Confidence            9999999998  999999999999974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.34  E-value=7.1e-12  Score=73.45  Aligned_cols=98  Identities=23%  Similarity=0.224  Sum_probs=72.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCC--CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      +++|.......   ...+.+|...++.+++  .+++.++.... ..+..++++||+.++++..+       ..       
T Consensus        24 ~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-~~~~~~~v~e~~~g~~~~~~-------~~-------   85 (155)
T cd05120          24 YVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGE-SDGWSYLLMEWIEGETLDEV-------SE-------   85 (155)
T ss_pred             EEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCccEEEEEecCCeecccC-------CH-------
Confidence            35666654422   4678899999999965  58888888776 55678899999997767543       11       


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCC-CCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIK-PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~-~~i~h~dlk~~nill~~  121 (122)
                           .....++.+++.++..+|... .+++|+|++|+||+++.
T Consensus        86 -----~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          86 -----EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             -----HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence                 112567889999999999841 23999999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1165|consensus

Probab=99.25  E-value=6.2e-11  Score=77.43  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=80.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.-+..+   .+..+..|.+..+.+ .-++|..+|..-. .+..-.||+|.+. .+|.++++-++.           
T Consensus        56 VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYYFGq-eG~~NiLVidLLG-PSLEDLFD~CgR-----------  119 (449)
T KOG1165|consen   56 VAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-EGKYNILVIDLLG-PSLEDLFDLCGR-----------  119 (449)
T ss_pred             EEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceeeecc-ccchhhhhhhhhC-cCHHHHHHHhcC-----------
Confidence            6888766553   234566778777777 5789988887666 6666678999885 999999875432           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..+.+..++.|++.-+.++|++.  ++.||+||+|+||.+
T Consensus       120 ~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGr  159 (449)
T KOG1165|consen  120 RFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGR  159 (449)
T ss_pred             cccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecC
Confidence            3444455999999999999999999  999999999999974

>KOG4158|consensus

Probab=99.15  E-value=5.8e-11  Score=79.32  Aligned_cols=76  Identities=26%  Similarity=0.395  Sum_probs=61.4

Q ss_pred             CCCCccceeeeeeeC--------------------------CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCC
Q psy4991          29 DHPRVVKLYDVFEID--------------------------ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYL   82 (122)
Q Consensus        29 ~h~~i~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~   82 (122)
                      +||||+.+.++|.++                          +..+|++|.... .+|.+++..+.. +..          
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~-s~r----------  341 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHR-SYR----------  341 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCC-chH----------
Confidence            799999999988522                          246889999887 899999986322 222          


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          83 STSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        83 ~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                        ....++.|+++++.|||..+  +.|||+|.+|||+.
T Consensus       342 --~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~E  375 (598)
T KOG4158|consen  342 --TGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLE  375 (598)
T ss_pred             --HHHHHHHHHHHHHHHHHHcc--chhhcccccceEEE
Confidence              22678999999999999999  99999999999984

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.14  E-value=1.7e-10  Score=70.41  Aligned_cols=80  Identities=23%  Similarity=0.285  Sum_probs=51.5

Q ss_pred             HHHHHHhhCCCCC--ccceeeeeeeCCCeEEEEEeccCCCCHHH-HHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDHPR--VVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        20 ~e~~~l~~~~h~~--i~~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                      .|.+.+..+.+..  +..+++.     ...++++||++++++.. .+... ...             .....++.+++.+
T Consensus        66 ~e~~~l~~l~~~~~~~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~-~~~-------------~~~~~~~~~~~~~  126 (187)
T cd05119          66 KEFRNLKRLYEAGVPVPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDV-RLL-------------EDPEELYDQILEL  126 (187)
T ss_pred             HHHHHHHHHHHcCCCCCceEec-----CCCEEEEEEeCCCCccChhhhhh-hhc-------------ccHHHHHHHHHHH
Confidence            4555555553332  3333332     22479999999754321 11110 000             2337889999999


Q ss_pred             HHHHHc-CCCCeeeeCCCCCCcccc
Q psy4991          97 LKYLNE-IKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        97 l~~lh~-~~~~i~h~dlk~~nill~  120 (122)
                      +.++|. .+  ++|+|++|+||+++
T Consensus       127 l~~lh~~~~--ivH~Dl~p~Nili~  149 (187)
T cd05119         127 MRKLYREAG--LVHGDLSEYNILVD  149 (187)
T ss_pred             HHHHhhccC--cCcCCCChhhEEEE
Confidence            999999 88  99999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=7.2e-10  Score=67.23  Aligned_cols=85  Identities=19%  Similarity=0.158  Sum_probs=66.5

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ..+..+|+.++.++.--.|....-... +.....++|||.+|..|.+.+....                   ..++..+-
T Consensus        43 r~Rt~~Earil~~a~~~GV~~P~v~dv-D~~~~~I~me~I~G~~lkd~l~~~~-------------------~~~~r~vG  102 (204)
T COG3642          43 RERTRREARILAKAREAGVPVPIVYDV-DPDNGLIVMEYIEGELLKDALEEAR-------------------PDLLREVG  102 (204)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCeEEEE-cCCCCEEEEEEeCChhHHHHHHhcc-------------------hHHHHHHH
Confidence            467788999999986656655544444 5666678999999888887887541                   35677777


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .-+.-||..+  ++|+||.++||++..
T Consensus       103 ~~vg~lH~~g--ivHGDLTtsNiIl~~  127 (204)
T COG3642         103 RLVGKLHKAG--IVHGDLTTSNIILSG  127 (204)
T ss_pred             HHHHHHHhcC--eecCCCccceEEEeC
Confidence            8899999999  999999999999864

>KOG0590|consensus

Probab=99.06  E-value=6e-11  Score=83.86  Aligned_cols=86  Identities=26%  Similarity=0.445  Sum_probs=66.5

Q ss_pred             HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY   99 (122)
Q Consensus        20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   99 (122)
                      .|.-+-..+.|+|++.....+. +.....-.||||++ +|..++...+.+.....            ..++.|++.|+.|
T Consensus       370 sE~~i~~~l~h~~~~e~l~~~~-~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~------------~c~fKqL~~Gv~y  435 (601)
T KOG0590|consen  370 SEFCIGSSLSHPNIIETLDIVQ-EIDGILQSMEYCPY-DLFSLVMSNGKLTPLEA------------DCFFKQLLRGVKY  435 (601)
T ss_pred             hheeecccccCCchhhhHHHHh-hcccchhhhhcccH-HHHHHHhcccccchhhh------------hHHHHHHHHHHHH
Confidence            3444445678999988777776 33333334999997 99999887544444444            7899999999999


Q ss_pred             HHcCCCCeeeeCCCCCCccccc
Q psy4991         100 LNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       100 lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +|+.|  +.|||+|++|++++.
T Consensus       436 ~h~~G--iahrdlK~enll~~~  455 (601)
T KOG0590|consen  436 LHSMG--LAHRDLKLENLLVTE  455 (601)
T ss_pred             HHhcC--ceeccCccccEEEec
Confidence            99999  999999999999875

>KOG1166|consensus

Probab=99.05  E-value=3.1e-10  Score=83.06  Aligned_cols=74  Identities=20%  Similarity=0.203  Sum_probs=57.8

Q ss_pred             ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCC
Q psy4991          33 VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL  112 (122)
Q Consensus        33 i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dl  112 (122)
                      |..+..+.. -.+.-++++||.+.|+|.+++...+...+..+            ..++.|++..+..||..+  |+|+||
T Consensus       756 ~~~~~~a~~-~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv------------~~~~~qml~ive~lH~~~--IIHgDi  820 (974)
T KOG1166|consen  756 IMHISSAHV-FQNASVLVSEYSPYGTLLDLINTNKVMDEYLV------------MFFSCQMLRIVEHLHAMG--IIHGDI  820 (974)
T ss_pred             hHHHHHHHc-cCCcceeeeeccccccHHHhhccCCCCCchhh------------hHHHHHHHHHHHHHHhcc--eecccC
Confidence            444444443 23444589999999999999985554444444            899999999999999999  999999


Q ss_pred             CCCCccccc
Q psy4991         113 KPGKPLFLF  121 (122)
Q Consensus       113 k~~nill~~  121 (122)
                      ||+|+||..
T Consensus       821 KPDNfll~~  829 (974)
T KOG1166|consen  821 KPDNFLLRR  829 (974)
T ss_pred             CcceeEeec
Confidence            999999864

>KOG0195|consensus

Probab=99.05  E-value=6.3e-11  Score=75.82  Aligned_cols=108  Identities=13%  Similarity=0.272  Sum_probs=78.7

Q ss_pred             eeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           3 AKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         3 vK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      +|++.-. .+.....+|..|..-|+.+.||||+.+.++|. ++..+.++..||+.|+|...+.+....-.          
T Consensus       218 akil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-sppnlv~isq~mp~gslynvlhe~t~vvv----------  286 (448)
T KOG0195|consen  218 AKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-SPPNLVIISQYMPFGSLYNVLHEQTSVVV----------  286 (448)
T ss_pred             hhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-CCCCceEeeeeccchHHHHHHhcCccEEE----------
Confidence            3444432 33445677888888889999999999999998 77778899999999999999976543211          


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .-.+...++..++.|+.|||+..+-+.---|....+++++
T Consensus       287 d~sqav~faldiargmaflhslep~ipr~~lns~hvmide  326 (448)
T KOG0195|consen  287 DHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE  326 (448)
T ss_pred             ecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc
Confidence            1123488999999999999997543433445555666654

>KOG3087|consensus

Probab=99.03  E-value=1.8e-09  Score=65.62  Aligned_cols=95  Identities=13%  Similarity=0.107  Sum_probs=68.6

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQ   92 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (122)
                      ..++..+|++.+.++.--+|.-..-.+. +...-.+.|||.+| -++.+++...-...          ..+.....++..
T Consensus        53 tr~Rt~~Ear~l~k~~~~GI~~P~l~~~-D~~~~~i~ME~~~g~~~vk~~i~~~~~~~----------~~d~~~~~~~~~  121 (229)
T KOG3087|consen   53 TRKRTKQEARLLAKCRALGIPAPRLIFI-DTYGGQIYMEFIDGASTVKDFILSTMEDE----------SEDEGLAELARR  121 (229)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEE-ecCCCeEEEEeccchhHHHHHHHHHccCc----------ccchhHHHHHHH
Confidence            4567788999999986656655544444 44555689999985 37777776543211          111222578889


Q ss_pred             HHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          93 VVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        93 i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +-+.+.-||..+  ++|+||..+||++.+
T Consensus       122 iG~~igklH~nd--iiHGDLTTSNill~~  148 (229)
T KOG3087|consen  122 IGELIGKLHDND--IIHGDLTTSNILLRS  148 (229)
T ss_pred             HHHHHHHhhhCC--eecccccccceEEec
Confidence            999999999999  999999999999864

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.99  E-value=2.1e-09  Score=64.57  Aligned_cols=95  Identities=18%  Similarity=0.123  Sum_probs=62.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCC-ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +++|.......  ......+|+..++.+...+ +..++....   ...+++|||++|.++... .       ...     
T Consensus        24 ~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~~---~~~~lv~e~i~G~~l~~~-~-------~~~-----   85 (170)
T cd05151          24 YVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFDP---ETGVLITEFIEGSELLTE-D-------FSD-----   85 (170)
T ss_pred             EEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEeC---CCCeEEEEecCCCccccc-c-------ccC-----
Confidence            35666554421  2345678888888885444 344544432   234689999998777532 0       000     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCC---CeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKP---PVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~---~i~h~dlk~~nill~  120 (122)
                             .....+++.++..||..+.   .++|+|++|+||+++
T Consensus        86 -------~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          86 -------PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             -------HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence                   3457789999999999751   259999999999986

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.94  E-value=3.1e-09  Score=72.94  Aligned_cols=88  Identities=18%  Similarity=0.164  Sum_probs=52.6

Q ss_pred             HHHHHHHHhhC----CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          18 ALREYNIHKAL----DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        18 ~~~e~~~l~~~----~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      +.+|++.+.++    ++.+-+.+...+..-....+++|||++|+++.+........           .   ....++..+
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-----------~---~~~~ia~~~  265 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG-----------L---DRKALAENL  265 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC-----------C---CHHHHHHHH
Confidence            44555555554    23333343334421223457999999999998765431100           0   012344444


Q ss_pred             HH-HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VS-ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~-~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +. .+..+|..|  ++|+|++|+||++++
T Consensus       266 ~~~~l~ql~~~g--~~H~D~hPgNilv~~  292 (437)
T TIGR01982       266 ARSFLNQVLRDG--FFHADLHPGNIFVLK  292 (437)
T ss_pred             HHHHHHHHHhCC--ceeCCCCcccEEECC
Confidence            44 356778888  999999999999964

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.94  E-value=4.5e-09  Score=64.85  Aligned_cols=82  Identities=18%  Similarity=0.214  Sum_probs=55.7

Q ss_pred             HHHHHHhhCCC--CCccceeeeeeeCCCeEEEEEeccCCCCHH-HHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGHDLD-FYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        20 ~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                      +|.+.|+++..  .+++.++..     ...+++|||+.++.+. ..++. ..            +.+.....+..+++.+
T Consensus        75 kE~r~L~rl~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd-~~------------~~~~~~~~i~~~i~~~  136 (197)
T cd05146          75 KEMHNLKRMQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD-AK------------LNDEEMKNAYYQVLSM  136 (197)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc-cc------------cCHHHHHHHHHHHHHH
Confidence            79999999843  456666653     2345899999754331 11221 11            1122335667899999


Q ss_pred             HHHH-HcCCCCeeeeCCCCCCccccc
Q psy4991          97 LKYL-NEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        97 l~~l-h~~~~~i~h~dlk~~nill~~  121 (122)
                      +..+ |..+  ++|+||++.||++..
T Consensus       137 l~~l~H~~g--lVHGDLs~~NIL~~~  160 (197)
T cd05146         137 MKQLYKECN--LVHADLSEYNMLWHD  160 (197)
T ss_pred             HHHHHHhCC--eecCCCCHHHEEEEC
Confidence            9988 7888  999999999999853

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243|consensus

Probab=98.92  E-value=8.4e-09  Score=72.59  Aligned_cols=90  Identities=22%  Similarity=0.270  Sum_probs=71.2

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ..+...+-+..++.++||+|++++..+. ..+..|+|+|.+.  .|..+++..+.   ...            .--+.||
T Consensus        52 ~~~~~~~A~k~lKtlRHP~Il~yL~t~e-~~~~~ylvTErV~--Pl~~~lk~l~~---~~v------------~~Gl~qI  113 (690)
T KOG1243|consen   52 VTELAKRAVKRLKTLRHPNILSYLDTTE-EEGTLYLVTERVR--PLETVLKELGK---EEV------------CLGLFQI  113 (690)
T ss_pred             hhHHHHHHHHHhhhccCchhhhhhhhhc-ccCceEEEeeccc--cHHHHHHHhHH---HHH------------HHHHHHH
Confidence            3455677788999999999999999998 6678999999984  77777776442   111            4558999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +.++.|||+. +.++|+++..+.++++.+
T Consensus       114 l~AL~FL~~d-~~lvHgNv~~~SVfVn~~  141 (690)
T KOG1243|consen  114 LAALSFLNDD-CNLVHGNVCKDSVFVNES  141 (690)
T ss_pred             HHHHHHHhcc-CCeeeccEeeeeEEEcCC
Confidence            9999999854 339999999999988753

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.88  E-value=1.8e-08  Score=65.11  Aligned_cols=93  Identities=17%  Similarity=0.102  Sum_probs=64.8

Q ss_pred             HHHHHHHHHhhCCCCCccc--eeeeeeeC----CCeEEEEEeccCCC-CHHHHHHhccchhHHhhhhcCCCCChHHHHHH
Q psy4991          17 HALREYNIHKALDHPRVVK--LYDVFEID----ANSFCTVLEYCDGH-DLDFYLKQHKTIAEREARCLSQPYLSTSARSI   89 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i~~--~~~~~~~~----~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (122)
                      .+.+|.+.+..+...+|..  +.++....    ....++|+|++++. +|.+++.....          .+........+
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~----------~~~~~~~~~~l  143 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT----------NPPDPRLKRML  143 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc----------cCCCHHHHHHH
Confidence            4778999888885444433  33333211    23467999999865 78888753211          01112333688


Q ss_pred             HHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          90 VMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        90 ~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+++..+.-||..|  +.|+|++++|||++.
T Consensus       144 l~~la~~i~~LH~~G--i~HgDL~~~NiLl~~  173 (268)
T PRK15123        144 IKRVATMVRDMHAAG--INHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHHHHHHHHHCc--CccCCCChhhEEEec
Confidence            999999999999999  999999999999963

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.84  E-value=7.7e-08  Score=59.94  Aligned_cols=93  Identities=19%  Similarity=0.179  Sum_probs=66.5

Q ss_pred             hHHHHHHHHHHhhCCCC--CccceeeeeeeCC---CeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHHH
Q psy4991          15 PRHALREYNIHKALDHP--RVVKLYDVFEIDA---NSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSARS   88 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~---~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   88 (122)
                      ..++.+|...+..+...  ..+.+.++.....   ...++++|++++ .+|.+++.........            ....
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~------------~~~~  122 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPS------------QRRE  122 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchh------------hHHH
Confidence            45677888888877433  3445555544211   245789999986 4788888753222222            2267


Q ss_pred             HHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          89 IVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        89 ~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ++.+++..+.-||..|  +.|+|+++.|||++.
T Consensus       123 ll~~l~~~i~~lH~~g--i~H~Dl~~~NILv~~  153 (206)
T PF06293_consen  123 LLRALARLIAKLHDAG--IYHGDLNPSNILVDP  153 (206)
T ss_pred             HHHHHHHHHHHHHHCc--CCCCCCCcccEEEeC
Confidence            8999999999999999  999999999999975

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.81  E-value=1.7e-08  Score=70.68  Aligned_cols=87  Identities=16%  Similarity=0.164  Sum_probs=48.4

Q ss_pred             HHHHHHHHhhC----CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHH--HhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991          18 ALREYNIHKAL----DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL--KQHKTIAEREARCLSQPYLSTSARSIVM   91 (122)
Q Consensus        18 ~~~e~~~l~~~----~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (122)
                      +.+|+..+.++    .+.+.+.+..++.+-....+++|||+.|+++.++-  ...+....        .+.+..+..++.
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~--------~la~~~v~~~~~  274 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMK--------LLAERGVEVFFT  274 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHH--------HHHHHHHHHHHH
Confidence            34455544444    24444444444431223456899999999997642  22221100        111222234444


Q ss_pred             HHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          92 QVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        92 ~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      |+.       ..|  ++|+|++|+||+++.
T Consensus       275 Qif-------~~G--ffHaDpHPGNIlv~~  295 (537)
T PRK04750        275 QVF-------RDG--FFHADMHPGNIFVSY  295 (537)
T ss_pred             HHH-------hCC--eeeCCCChHHeEEec
Confidence            443       467  999999999999975

>KOG1240|consensus

Probab=98.79  E-value=2e-09  Score=79.37  Aligned_cols=104  Identities=19%  Similarity=0.195  Sum_probs=73.2

Q ss_pred             CeeeeccCCCCCcchHHHH---HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHAL---REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~---~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      |.||++-+....-....+.   +|+. ....++||.+.+--+.. ..+..||+-+|.- .+|.+.+..+.-+...+.   
T Consensus        49 vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~-t~kAAylvRqyvk-hnLyDRlSTRPFL~~iEK---  122 (1431)
T KOG1240|consen   49 VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV-TDKAAYLVRQYVK-HNLYDRLSTRPFLVLIEK---  122 (1431)
T ss_pred             EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH-hhHHHHHHHHHHh-hhhhhhhccchHHHHHHH---
Confidence            4678777664333334443   3444 45569999988876655 5555667777775 677777764333333333   


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               +-++.|++.|+.-+|..|  +.|+|||.+|||+++
T Consensus       123 ---------kWiaFQLL~al~qcH~~g--VcHGDIKsENILiTS  155 (1431)
T KOG1240|consen  123 ---------KWIAFQLLKALSQCHKLG--VCHGDIKSENILITS  155 (1431)
T ss_pred             ---------HHHHHHHHHHHHHHHHcC--ccccccccceEEEee
Confidence                     567999999999999999  999999999999974

>KOG0603|consensus

Probab=98.77  E-value=2.8e-09  Score=74.19  Aligned_cols=105  Identities=23%  Similarity=0.283  Sum_probs=83.0

Q ss_pred             eeeeccCC-CCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           2 CAKLLTTN-LNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         2 avK~~~~~-~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      |+|++++. ...+.......|-.++..++ |+.++.+..+++ .....+++.++..+|.+...+...........     
T Consensus        26 amkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq-t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~-----   99 (612)
T KOG0603|consen   26 AMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ-TDGKLYLILDFLRGGDLFTRLSKEVMFDELDV-----   99 (612)
T ss_pred             hhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-cccchhHhhhhcccchhhhccccCCchHHHHH-----
Confidence            56666654 22223345666777888885 999999999998 66778899999999999888776555554444     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             ..+...++-++.++|+.+  ++++|+|++||+++.
T Consensus       100 -------~~~~aelaLald~lh~l~--iiyrd~k~enilld~  132 (612)
T KOG0603|consen  100 -------AFYLAELALALDHLHKLG--IAYRDYKLENVLLLL  132 (612)
T ss_pred             -------HHHHHHHHHHHhhcchhH--HHHhcccccceeecc
Confidence                   778888999999999999  999999999999874

>KOG1266|consensus

Probab=98.76  E-value=6.7e-09  Score=68.14  Aligned_cols=89  Identities=24%  Similarity=0.356  Sum_probs=68.9

Q ss_pred             HhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHH
Q psy4991          25 HKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYL  100 (122)
Q Consensus        25 l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  100 (122)
                      +.++.|.||+++..++.+    +.....++.|||..|++.++|+.....        ...++.....+|..||..|+.||
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--------~~a~~~~~wkkw~tqIlsal~yL  192 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--------QKALFQKAWKKWCTQILSALSYL  192 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--------hhhhhHHHHHHHHHHHHhhhhhh
Confidence            445579999999888862    223577899999999999999874331        11233344478999999999999


Q ss_pred             HcCCCCeeeeCCCCCCccccc
Q psy4991         101 NEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       101 h~~~~~i~h~dlk~~nill~~  121 (122)
                      |+..|+++|+++....|++..
T Consensus       193 hs~~PpiihgnlTc~tifiq~  213 (458)
T KOG1266|consen  193 HSCDPPIIHGNLTCDTIFIQH  213 (458)
T ss_pred             hccCCccccCCcchhheeecC
Confidence            999999999999988887754

>KOG3741|consensus

Probab=98.76  E-value=5.4e-08  Score=67.28  Aligned_cols=101  Identities=19%  Similarity=0.118  Sum_probs=74.0

Q ss_pred             HHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCC-CCHHHHHHhccchhHHhh---hhcCCCCChHHHHHHH
Q psy4991          18 ALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDG-HDLDFYLKQHKTIAEREA---RCLSQPYLSTSARSIV   90 (122)
Q Consensus        18 ~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~   90 (122)
                      -..-++.++++.|+|++.+..+|.+   ....+++|++|.++ ++|.++--...+......   .......++..+|.++
T Consensus       320 ~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~  399 (655)
T KOG3741|consen  320 DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYI  399 (655)
T ss_pred             chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHH
Confidence            3345778999999999999999851   23478899999874 666655433322221111   1112346788999999


Q ss_pred             HHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          91 MQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        91 ~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .|++.|+.++|+.|  +.-+-|.+.+|+++
T Consensus       400 ~QLtaaL~sIHssG--LAck~L~~~kIlv~  427 (655)
T KOG3741|consen  400 SQLTAALYSIHSSG--LACKTLDLKKILVT  427 (655)
T ss_pred             HHHHHHHHHHHhcC--ceeecccHhHeEee
Confidence            99999999999999  88899999999886

>KOG1023|consensus

Probab=98.66  E-value=8.7e-08  Score=66.13  Aligned_cols=84  Identities=21%  Similarity=0.194  Sum_probs=67.9

Q ss_pred             HhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCC
Q psy4991          25 HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIK  104 (122)
Q Consensus        25 l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~  104 (122)
                      |+.+.|.|+..++|.+. ++...+.+.+||..|+|.+.+... .          ..+.+.-...+++.++.|+.|+|...
T Consensus         1 l~~l~h~n~~~f~g~~~-~~~~~~~i~~~c~rGsl~D~i~~~-~----------~~~d~~F~~s~~rdi~~Gl~ylh~s~   68 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASV-DGPEMIVIWEYCSRGSLLDILSNE-D----------IKLDYFFILSFIRDISKGLAYLHNSP   68 (484)
T ss_pred             CcccchhhhhhheeeEe-cCCceEEEEeeecCccHHhHHhcc-c----------cCccHHHHHHHHHHHHHHHHHHhcCc
Confidence            35678999999999998 668888999999999999999862 1          12222233688999999999999975


Q ss_pred             CCeeeeCCCCCCccccc
Q psy4991         105 PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       105 ~~i~h~dlk~~nill~~  121 (122)
                       -..|+.++.+|.+++.
T Consensus        69 -i~~hg~l~s~nClvd~   84 (484)
T KOG1023|consen   69 -IGYHGALKSSNCLVDS   84 (484)
T ss_pred             -ceeeeeeccccceeee
Confidence             1389999999999874

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.56  E-value=5.1e-07  Score=56.29  Aligned_cols=62  Identities=24%  Similarity=0.243  Sum_probs=40.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCC--CCccceeeeeeeCC--CeEEEEEeccCCCCHHHH
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDH--PRVVKLYDVFEIDA--NSFCTVLEYCDGHDLDFY   62 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~   62 (122)
                      +++|.............+.+|..+++.+.+  .++..++.......  +..++++||++|.++...
T Consensus        25 ~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~   90 (223)
T cd05154          25 LVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR   90 (223)
T ss_pred             eEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence            356666544222245678899999999865  34566766665221  256799999998766543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.55  E-value=5e-07  Score=55.54  Aligned_cols=86  Identities=21%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             hHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccC--CCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCD--GHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIV   90 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (122)
                      .....+|.+.|..+...  +++.++.+.   .  ..++|||++  |..+..+....  ....            ....+.
T Consensus        52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~---~--~~ivME~I~~~G~~~~~l~~~~--~~~~------------~~~~~~  112 (188)
T PF01163_consen   52 REWAKKEFRNLKRLYEAGVPVPKPYDYN---R--NVIVMEYIGEDGVPLPRLKDVD--LSPE------------EPKELL  112 (188)
T ss_dssp             HHHHHHHHHHHHHCCCTT-SS--EEEEE---T--TEEEEE--EETTEEGGCHHHCG--GGGS------------THHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCccCCcEEEEe---C--CEEEEEecCCCccchhhHHhcc--ccch------------hHHHHH
Confidence            35567899999999655  556665432   1  248999998  55554433321  1011            115667


Q ss_pred             HHHHHHHHH-HHcCCCCeeeeCCCCCCccccc
Q psy4991          91 MQVVSALKY-LNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        91 ~~i~~~l~~-lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++...+.. +|..|  ++|+|+.+.||++++
T Consensus       113 ~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~  142 (188)
T PF01163_consen  113 EEILEEIIKMLHKAG--IVHGDLSEYNILVDD  142 (188)
T ss_dssp             HHHHHHHHHHHHCTT--EEESS-STTSEEEET
T ss_pred             HHHHHHHHHHHHhcC--ceecCCChhhEEeec
Confidence            777775555 57888  999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0590|consensus

Probab=98.45  E-value=2.2e-08  Score=71.13  Aligned_cols=95  Identities=29%  Similarity=0.355  Sum_probs=72.8

Q ss_pred             chHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHH-HhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARCLSQPYLSTSARSIVM   91 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (122)
                      ...+...|..+-..+. |.|++++++... .....++.+++..++++...+ ....           ....+...-.++.
T Consensus        63 ~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-~~~~~~~~~~~s~g~~~f~~i~~~~~-----------~~~~~~~~~~~~~  130 (601)
T KOG0590|consen   63 SSEHIDTETDIQKKLSKHSNTVHMIEPSS-SPRSYLLSLSYSDGGSLFSKISHPDS-----------TGTSSSSASRYLP  130 (601)
T ss_pred             hhhhcCccccccccccccccccccCCccC-CCcccccccCcccccccccccccCCc-----------cCCCCcchhhhhh
Confidence            3344455666666665 999999999998 777888999999999988776 3322           0122223378999


Q ss_pred             HHHHHHHHHH-cCCCCeeeeCCCCCCcccccC
Q psy4991          92 QVVSALKYLN-EIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        92 ~i~~~l~~lh-~~~~~i~h~dlk~~nill~~~  122 (122)
                      |+..++.|+| ..+  +.|+|+||+|.+++.+
T Consensus       131 ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s  160 (601)
T KOG0590|consen  131 QLNSGLSYLHPENG--VTHRDIKPSNSLLDES  160 (601)
T ss_pred             hhccCccccCcccc--cccCCCCCccchhccC
Confidence            9999999999 777  9999999999998753

>KOG0601|consensus

Probab=98.30  E-value=2.9e-07  Score=63.94  Aligned_cols=91  Identities=19%  Similarity=0.243  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        16 ~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ...+.|+.+...+ .|.+++..+..|. .....++-.|||+++++.....-..            -+.+...+....|++
T Consensus       310 i~sl~ev~l~~~l~~~~~~~g~~~~W~-~~r~~~ip~e~~~~~s~~l~~~~~~------------~~d~~~~~~~~~q~~  376 (524)
T KOG0601|consen  310 IFSLGEVILEAILGSHLPSVGKNSSWS-QLRQGYIPLEFCEGGSSSLRSVTSQ------------MLDEDPRLRLTAQIL  376 (524)
T ss_pred             hcchhhhhHhhHhhcccccCCCCCCcc-ccccccCchhhhcCcchhhhhHHHH------------hcCcchhhhhHHHHH
Confidence            3345677777777 5888888877776 4556668889999888866552211            222334488999999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.++|+..  ++|+|++|+||++..
T Consensus       377 ~~l~~i~s~~--~~~~d~~psni~i~~  401 (524)
T KOG0601|consen  377 TALNVIHSKL--FVHLDVKPSNILISN  401 (524)
T ss_pred             hccccccchh--hhcccccccceeecc
Confidence            9999999998  999999999999865

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.28  E-value=2.6e-06  Score=51.32  Aligned_cols=46  Identities=22%  Similarity=0.305  Sum_probs=36.6

Q ss_pred             CCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          57 HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        57 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      |+|.+++...+           ..+.+..++.++.|++.|+.|||+.+        ||+||+++.
T Consensus         1 GsL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~   46 (176)
T smart00750        1 VSLADILEVRG-----------RPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTW   46 (176)
T ss_pred             CcHHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcC
Confidence            67777776532           24566667999999999999999985        999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.19  E-value=1.3e-05  Score=50.44  Aligned_cols=54  Identities=26%  Similarity=0.386  Sum_probs=41.1

Q ss_pred             eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          46 SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        46 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..++++||++|..|.+...-.                    -.....+.+++.-+|..|  +.|+|..|+|++++.
T Consensus       117 ~~~ll~EYIeG~~l~d~~~i~--------------------e~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIEDID--------------------EDLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSN  170 (229)
T ss_pred             EEEEEEEEecCeecccchhcC--------------------HHHHHHHHHHHHHHHHcC--CccCCCCcCcEEEEC
Confidence            456899999987776543211                    123456777899999999  999999999999874

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=98.03  E-value=6.2e-05  Score=47.13  Aligned_cols=95  Identities=18%  Similarity=0.122  Sum_probs=64.2

Q ss_pred             chHHHHHHHHHHhhCCCCC--ccceeeeeee-C--CCeEEEEEeccCC-CCHHHHHHhccchhHHhhhhcCCCCChHHHH
Q psy4991          14 FPRHALREYNIHKALDHPR--VVKLYDVFEI-D--ANSFCTVLEYCDG-HDLDFYLKQHKTIAEREARCLSQPYLSTSAR   87 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~-~--~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~   87 (122)
                      -...+.+|...+..+...+  ++.+...-.. .  ...-.||+|-+++ .+|.+.+... ..         .+..+....
T Consensus        62 g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~-~~---------~~~~~~~k~  131 (216)
T PRK09902         62 GRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH-AV---------SPYSDEVRQ  131 (216)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcC-Cc---------CCcchHHHH
Confidence            3577899999999985433  4444311110 1  1235688897754 6777776542 11         112223336


Q ss_pred             HHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          88 SIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        88 ~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .+..+++..+.-||+.|  +.|+|+.+.||+++
T Consensus       132 ~il~~va~~ia~LH~~G--v~Hgdly~khIll~  162 (216)
T PRK09902        132 AMLKAVALAFKKMHSVN--RQHGCCYVRHIYVK  162 (216)
T ss_pred             HHHHHHHHHHHHHHHCC--CcCCCCCHhheeec
Confidence            88999999999999999  99999999999986

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.98  E-value=1.9e-05  Score=51.57  Aligned_cols=68  Identities=18%  Similarity=0.207  Sum_probs=41.7

Q ss_pred             EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          47 FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        47 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+++|+-+. ++|..++..-......     ...+.......+..|++..++++|..|  ++|+|++|+|++++.+
T Consensus       114 ~~~l~P~~~-~dL~~~~~~l~~~~~~-----~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHgdi~~~nfll~~~  181 (288)
T PF14531_consen  114 RFLLMPRAQ-GDLQDLVEALFSRAQT-----HSPLAFAARLSLTVQMIRLVANLHSYG--LVHGDIKPENFLLDQD  181 (288)
T ss_dssp             EEEEEE--S-EEHHHHHHHHHHHTTT-----SHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEE-TT
T ss_pred             hhhccchhh-hcHHHHHHHHhhcccc-----cchhHHHHHHHHHHHHHHHHHHHhhcc--eEecccceeeEEEcCC
Confidence            356777775 8888776531110000     000111122456689999999999999  9999999999999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.97  E-value=0.00026  Score=44.06  Aligned_cols=88  Identities=22%  Similarity=0.297  Sum_probs=57.9

Q ss_pred             chHHHHHHHHHHhhCC------CCCccceeeeeeeCCCeEEEEEeccC------CCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991          14 FPRHALREYNIHKALD------HPRVVKLYDVFEIDANSFCTVLEYCD------GHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      ......+|+.....+.      +.+|..++|..+++.+ ..+++|...      ..+|.+++.... +..          
T Consensus        54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G-~Glv~e~I~d~dG~~s~TL~~~l~~~~-~~~----------  121 (199)
T PF10707_consen   54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLG-LGLVVELIRDADGNISPTLEDYLKEGG-LTE----------  121 (199)
T ss_pred             hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCc-eEEEEEEEECCCCCcCccHHHHHHcCC-ccH----------
Confidence            3566677777666555      7899999999985544 457888653      256777775422 111          


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .....+-.-..++-+.+  |+.+|++|.||++..
T Consensus       122 ------~~~~~L~~f~~~l~~~~--Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen  122 ------ELRQALDEFKRYLLDHH--IVIRDLNPHNIVVQR  153 (199)
T ss_pred             ------HHHHHHHHHHHHHHHcC--CeecCCCcccEEEEe
Confidence                  12222333455666777  999999999999864

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.68  E-value=0.00095  Score=42.52  Aligned_cols=46  Identities=15%  Similarity=-0.010  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHH
Q psy4991          16 RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY   62 (122)
Q Consensus        16 ~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   62 (122)
                      ....+|++++..+ ++..+..+++... ..+..+++||+++|.++...
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGS-DDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEe-cCCccEEEEEeeCCccHhHh
Confidence            4567889888887 3455667777665 44556789999998777644

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0601|consensus

Probab=97.63  E-value=5e-05  Score=53.19  Aligned_cols=92  Identities=22%  Similarity=0.284  Sum_probs=69.3

Q ss_pred             hHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        15 ~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      ..+-.+|.....++ .|++.+..+..+. +.+..++-+|.+. .++..+......           -+++..++....+.
T Consensus       161 ~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~~lfiqtE~~~-~sl~~~~~~~~~-----------~~p~~~l~~~~~~~  227 (524)
T KOG0601|consen  161 SKRKLREFLSHHKIDSHENPVRDSPAWE-GSGILFIQTELCG-ESLQSYCHTPCN-----------FLPDNLLWNSLRDW  227 (524)
T ss_pred             cccccchhhcccccCccccccccCcccc-cCCcceeeecccc-chhHHhhhcccc-----------cCCchhhhhHHhhh
Confidence            34445677777777 6999999888887 7788888899986 677666543222           23444457777777


Q ss_pred             HH----HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VS----ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~----~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+    |+.++|..+  ++|.|+||+||+...
T Consensus       228 ~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~  257 (524)
T KOG0601|consen  228 LSRDVTALSHLHSNN--IVHDDLKPANIFTTS  257 (524)
T ss_pred             hhcccccccccCCCc--ccccccchhheeccc
Confidence            77    999999999  999999999999864

>PLN02876 acyl-CoA dehydrogenase

Probab=97.61  E-value=0.002  Score=48.10  Aligned_cols=44  Identities=32%  Similarity=0.498  Sum_probs=31.9

Q ss_pred             chHHHHHHHHHHhhCC-CCCc--cceeeeeeeCC---CeEEEEEeccCCCC
Q psy4991          14 FPRHALREYNIHKALD-HPRV--VKLYDVFEIDA---NSFCTVLEYCDGHD   58 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~-h~~i--~~~~~~~~~~~---~~~~lv~e~~~~~~   58 (122)
                      ....+.+|.++++.+. |.++  +.+++.+. +.   +..++||||++|..
T Consensus        81 ~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~-d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         81 SAHAVEREYQVLRALGEHTDVPVPKVYCLCT-DASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCCCCcEEEEec-CCCcCCCceEEEEecCCcc
Confidence            3457889999999984 6654  77777765 32   45679999998654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.45  E-value=0.00037  Score=45.30  Aligned_cols=85  Identities=20%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             chHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991          14 FPRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM   91 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (122)
                      .+....+|.+.|+++...  .++..++     .+...++||+..|-.|...--     .....            -.++.
T Consensus       152 sRl~A~rEf~~L~~L~~~G~~VP~P~~-----~nRHaVvMe~ieG~eL~~~r~-----~~en~------------~~il~  209 (304)
T COG0478         152 SRLAAEREFEALQRLYPEGVKVPKPIA-----WNRHAVVMEYIEGVELYRLRL-----DVENP------------DEILD  209 (304)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCccc-----cccceeeeehcccceeecccC-----cccCH------------HHHHH
Confidence            345667899999998544  5555544     234568999999765543221     01111            34445


Q ss_pred             HHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          92 QVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        92 ~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .++.-+.-.-..|  ++|+|+++=||+++++
T Consensus       210 ~il~~~~~~~~~G--iVHGDlSefNIlV~~d  238 (304)
T COG0478         210 KILEEVRKAYRRG--IVHGDLSEFNILVTED  238 (304)
T ss_pred             HHHHHHHHHHHcC--ccccCCchheEEEecC
Confidence            5555555555677  9999999999999863

>KOG1033|consensus

Probab=97.36  E-value=6.7e-05  Score=52.11  Aligned_cols=62  Identities=24%  Similarity=0.416  Sum_probs=48.9

Q ss_pred             eEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          46 SFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        46 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++.|++|.-.+|.+.+.....         ...-.....+.++.|++.++.|   ++  .+|+|+||.||+...
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~---------~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~  391 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRT---------GEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSD  391 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCc---------ccccchhHHHHHHHhhccchhh---cc--chhhhcccccccccc
Confidence            47889999999999998875332         2233344558899999999999   77  999999999998753

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.18  E-value=0.0024  Score=39.38  Aligned_cols=88  Identities=16%  Similarity=0.040  Sum_probs=60.6

Q ss_pred             HHHHHHhhCCC-CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK   98 (122)
Q Consensus        20 ~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~   98 (122)
                      .|.-+++.+++ +++++++|+|-    . .++.|+...+++...   ...+.      .-...+|..+..++.+++..+.
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~-~~v~E~~~~~~~~~~---~~~l~------~~~~~~w~~R~~iA~~lL~~l~   73 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----R-FYVVEYVGAGSLYGI---YRPLS------QFLQSPWEQRAKIALQLLELLE   73 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----C-EEEEEeecCcccccc---ccccc------cccccCHHHHHHHHHHHHHHHH
Confidence            46777888854 69999999994    1 368899986655422   00000      0012356667899999999999


Q ss_pred             HHHcCC-CCeeeeCCCCCCccccc
Q psy4991          99 YLNEIK-PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        99 ~lh~~~-~~i~h~dlk~~nill~~  121 (122)
                      +++... .++.-.|++++|+-+++
T Consensus        74 ~l~~~~~~~~~lcDv~~~nfgv~~   97 (188)
T PF12260_consen   74 ELDHGPLGFFYLCDVSPDNFGVND   97 (188)
T ss_pred             HHhcCCCCcEEEeecchHHeEEeC
Confidence            998731 12777999999998875

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.06  E-value=0.018  Score=36.54  Aligned_cols=43  Identities=16%  Similarity=0.257  Sum_probs=30.6

Q ss_pred             hHHHHHHHHHHhhCCCC--CccceeeeeeeCCCeEEEEEeccCCCC
Q psy4991          15 PRHALREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHD   58 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~--~i~~~~~~~~~~~~~~~lv~e~~~~~~   58 (122)
                      .....+|.+.++.+..-  .+..+++... ..+...++||++.|.+
T Consensus        36 ~~~i~~E~~~l~~l~~~glpvP~~~~~~~-~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        36 KETIKREFDASRKVFSLGIPTPHPFDLVE-DGGRLGLIYELIVGKR   80 (226)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCceEEEEe-cCCeeeeeeeecCCcc
Confidence            45678899999888533  3466666665 5556778999999753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235|consensus

Probab=97.03  E-value=0.0053  Score=43.71  Aligned_cols=68  Identities=22%  Similarity=0.285  Sum_probs=40.4

Q ss_pred             ccceeeeeeeCCCeEEEEEeccCCCCHHHH--HHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHH-HHcCCCCeee
Q psy4991          33 VVKLYDVFEIDANSFCTVLEYCDGHDLDFY--LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKY-LNEIKPPVIH  109 (122)
Q Consensus        33 i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~~~i~h  109 (122)
                      |+++++.+.   ..-.++||||.|..+.+.  +++.+-.+                ..++..++++-.. +-..|  ++|
T Consensus       266 VP~Vy~~~s---t~RVLtME~~~G~~i~Dl~~i~~~gi~~----------------~~i~~~l~~~~~~qIf~~G--ffH  324 (538)
T KOG1235|consen  266 VPKVYWDLS---TKRVLTMEYVDGIKINDLDAIDKRGISP----------------HDILNKLVEAYLEQIFKTG--FFH  324 (538)
T ss_pred             CCeehhhcC---cceEEEEEecCCccCCCHHHHHHcCCCH----------------HHHHHHHHHHHHHHHHhcC--Ccc
Confidence            666666664   234589999999777544  33322211                1233333333222 23456  999


Q ss_pred             eCCCCCCccccc
Q psy4991         110 YDLKPGKPLFLF  121 (122)
Q Consensus       110 ~dlk~~nill~~  121 (122)
                      +|--|.||++.+
T Consensus       325 aDPHPGNilv~~  336 (538)
T KOG1235|consen  325 ADPHPGNILVRP  336 (538)
T ss_pred             CCCCCCcEEEec
Confidence            999999999974

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.63  E-value=0.011  Score=42.06  Aligned_cols=57  Identities=23%  Similarity=0.226  Sum_probs=34.0

Q ss_pred             EEEEEeccCCCCHHHHH--HhccchhHHhhhhcCCCCChHHHHHHHHHHHHH-HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          47 FCTVLEYCDGHDLDFYL--KQHKTIAEREARCLSQPYLSTSARSIVMQVVSA-LKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        47 ~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      -.++|||+.|-.+.+..  +..+...                ..++..++.+ +..+-..|  ++|.|.-|.||++..
T Consensus       241 ~VLtmE~i~Gi~i~d~~~l~~~g~d~----------------k~ia~~~~~~f~~q~~~dg--ffHaDpHpGNi~v~~  300 (517)
T COG0661         241 RVLTMEWIDGIKISDIAALKSAGIDR----------------KELAELLVRAFLRQLLRDG--FFHADPHPGNILVRS  300 (517)
T ss_pred             cEEEEEeeCCEecccHHHHHhcCCCH----------------HHHHHHHHHHHHHHHHhcC--ccccCCCccceEEec
Confidence            34899999998887763  3322211                1222222221 12222356  999999999999875

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.38  E-value=0.011  Score=38.12  Aligned_cols=83  Identities=19%  Similarity=0.170  Sum_probs=51.4

Q ss_pred             HHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSAL   97 (122)
Q Consensus        20 ~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l   97 (122)
                      +|...|.++.  +-.++..+.+..     ..++|||++....    . ...+.       .-++.+.....+..+++..+
T Consensus       117 kEf~NL~R~~eAGVrvP~Pi~~~~-----nVLvMEfIg~~g~----p-AP~Lk-------Dv~~e~~e~~~~~~~~v~~~  179 (268)
T COG1718         117 KEFRNLKRAYEAGVRVPEPIAFRN-----NVLVMEFIGDDGL----P-APRLK-------DVPLELEEAEGLYEDVVEYM  179 (268)
T ss_pred             HHHHHHHHHHHcCCCCCCceeecC-----CeEEEEeccCCCC----C-CCCcc-------cCCcCchhHHHHHHHHHHHH
Confidence            5666777763  445555555443     2489999964210    0 00010       01112223467788888888


Q ss_pred             HHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          98 KYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        98 ~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      .-|-. .+  ++|+||+.=|||+.+
T Consensus       180 ~~l~~~a~--LVHgDLSEyNiL~~~  202 (268)
T COG1718         180 RRLYKEAG--LVHGDLSEYNILVHD  202 (268)
T ss_pred             HHHHHhcC--cccccchhhheEEEC
Confidence            88877 77  999999999999863

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.16  E-value=0.071  Score=33.87  Aligned_cols=46  Identities=13%  Similarity=-0.005  Sum_probs=28.2

Q ss_pred             hHHHHHHHHHHhhCCCC---CccceeeeeeeC--CCeEEEEEeccCCCCHH
Q psy4991          15 PRHALREYNIHKALDHP---RVVKLYDVFEID--ANSFCTVLEYCDGHDLD   60 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~---~i~~~~~~~~~~--~~~~~lv~e~~~~~~L~   60 (122)
                      .....+|.++++.+...   .+..+++.....  ....+++|++++|.++.
T Consensus        32 ~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~   82 (235)
T cd05155          32 AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETAT   82 (235)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCC
Confidence            45788899999887421   344444433311  12347899999876653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0606|consensus

Probab=95.81  E-value=0.0043  Score=47.14  Aligned_cols=76  Identities=29%  Similarity=0.401  Sum_probs=56.9

Q ss_pred             CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeee
Q psy4991          31 PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHY  110 (122)
Q Consensus        31 ~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~  110 (122)
                      |-++...-.+. .....+++++++.+++|...+...+......+            ..+...+.....+||...  +.|+
T Consensus       864 P~v~~~~~s~~-~rsP~~L~~~~~~~~~~~Skl~~~~~~saepa------------Rs~i~~~vqs~e~L~s~~--r~h~  928 (1205)
T KOG0606|consen  864 PAVVRSFPSFP-CRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPA------------RSPILERVQSLESLHSSL--RKHR  928 (1205)
T ss_pred             CceecccCCCC-CCCCcchhhHHhccCCchhhhhcCCCcccccc------------cchhHHHHhhhhccccch--hhcc
Confidence            44443333333 45567899999999999999887665554444            667788889999999987  8999


Q ss_pred             CCCCCCccccc
Q psy4991         111 DLKPGKPLFLF  121 (122)
Q Consensus       111 dlk~~nill~~  121 (122)
                      |++|.|++..+
T Consensus       929 ~~~p~~~l~~~  939 (1205)
T KOG0606|consen  929 DLKPDSLLIAY  939 (1205)
T ss_pred             cccccchhhcc
Confidence            99999998653

>KOG0606|consensus

Probab=95.70  E-value=0.0072  Score=45.99  Aligned_cols=25  Identities=40%  Similarity=0.671  Sum_probs=23.4

Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+++|+|+-+  |+|||+||+|.+++
T Consensus       153 vla~Eylh~yg--ivhrdlkpdnllIT  177 (1205)
T KOG0606|consen  153 VLAVEYLHSYG--IVHRDLKPDNLLIT  177 (1205)
T ss_pred             hHHhHhhccCC--eecCCCCCCcceee
Confidence            77899999999  99999999999986

>KOG2270|consensus

Probab=93.84  E-value=0.17  Score=35.17  Aligned_cols=84  Identities=19%  Similarity=0.216  Sum_probs=51.5

Q ss_pred             HHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCH-HHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHH
Q psy4991          20 REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALK   98 (122)
Q Consensus        20 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~   98 (122)
                      .|.+.|.++...+|...--...   ....|||+|+..... ...|+             ..++....+..+-.+++.-|.
T Consensus       215 KE~RNLkRl~~aGIP~PePIlL---k~hVLVM~FlGrdgw~aPkLK-------------d~~ls~~ka~~~Y~~~v~~MR  278 (520)
T KOG2270|consen  215 KEMRNLKRLNNAGIPCPEPILL---KNHVLVMEFLGRDGWAAPKLK-------------DASLSTSKARELYQQCVRIMR  278 (520)
T ss_pred             HHHHHHHHHHhcCCCCCCceee---ecceEeeeeccCCCCcCcccc-------------cccCChHHHHHHHHHHHHHHH
Confidence            5777788887666544433332   334589999963111 11111             122333445677777788888


Q ss_pred             HHHcCCCCeeeeCCCCCCcccc
Q psy4991          99 YLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        99 ~lh~~~~~i~h~dlk~~nill~  120 (122)
                      -|.+. +.++|.||.-=|+|+.
T Consensus       279 ~lY~~-c~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  279 RLYQK-CRLVHADLSEFNLLYH  299 (520)
T ss_pred             HHHHH-hceeccchhhhhheEE
Confidence            88664 4499999998898874

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=93.17  E-value=1.4  Score=29.83  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=28.9

Q ss_pred             chHHHHHHHHHHhhCCC--CCccceeeeeeeCC-CeEEEEEeccCC
Q psy4991          14 FPRHALREYNIHKALDH--PRVVKLYDVFEIDA-NSFCTVLEYCDG   56 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~-~~~~lv~e~~~~   56 (122)
                      ...+..+|.++++.+.-  .-+...++.|.... +..+.+|+|+.|
T Consensus        64 ~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veG  109 (321)
T COG3173          64 SAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEG  109 (321)
T ss_pred             hhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecc
Confidence            44566778888887743  34556677776333 467789999986

>KOG0576|consensus

Probab=92.89  E-value=0.045  Score=40.09  Aligned_cols=80  Identities=11%  Similarity=0.169  Sum_probs=48.2

Q ss_pred             HHHHHHHHhhCCCCC-ccceeeeeeeCCCeEEEEEeccCCC-CHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          18 ALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGH-DLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        18 ~~~e~~~l~~~~h~~-i~~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      ..-++++|.+++||| .+..++.++ .....++.++++.++ +-......    .+       ..+...+.....+.-+.
T Consensus       280 ~rl~~eLLdK~n~P~~~v~~~~d~~-~E~~~~i~~~i~s~~rs~~~~~~~----se-------~~~~~~~~~~~~r~et~  347 (829)
T KOG0576|consen  280 RRLAIELLDKVNNPNPVVRYLEDYD-GEDYLWIPMRICSTGRSSALEMTV----SE-------IALEQYQFAYPLRKETR  347 (829)
T ss_pred             hHHHHHHHHHccCCCCcccccccCC-cccccchhhhhhcCCccccccCCh----hh-------Hhhhhhhhhhhhhhhcc
Confidence            345788999999999 666666666 556778899998765 11111100    00       01111222445556667


Q ss_pred             HHHHHHcCCCCeeeeC
Q psy4991          96 ALKYLNEIKPPVIHYD  111 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~d  111 (122)
                      ++.++|+..  -+|+|
T Consensus       348 ~l~~l~~~~--~~~~d  361 (829)
T KOG0576|consen  348 PLAELHSSY--KVHRD  361 (829)
T ss_pred             ccccccccc--ccCcc
Confidence            788888864  47777

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.87  E-value=1.7  Score=28.33  Aligned_cols=45  Identities=24%  Similarity=0.117  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHhhC---CCCCccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991          15 PRHALREYNIHKAL---DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD   60 (122)
Q Consensus        15 ~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~   60 (122)
                      ...|..|+.-|..+   +--++.+++.+-. +....++|+||++.+.+.
T Consensus        52 ~~~f~AEa~gL~~la~s~ti~VP~vi~~G~-~~~~sylVle~L~~~~~d   99 (286)
T COG3001          52 LSMFTAEADGLELLARSNTITVPKVIAVGA-SRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             HHHHHHHHHHHHHHHhcCCccccceEEecC-CCCeeEEEEeeccCCCCC
Confidence            45666777766666   3356667766666 677889999999865554

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.21  E-value=0.27  Score=33.62  Aligned_cols=36  Identities=25%  Similarity=0.334  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHHHHHHcC--CCCeeeeCCCCCCccccc
Q psy4991          86 ARSIVMQVVSALKYLNEI--KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        86 ~~~~~~~i~~~l~~lh~~--~~~i~h~dlk~~nill~~  121 (122)
                      +..++.|++.-.-.+-..  .-.++|.||||.|||+-+
T Consensus       281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  318 (444)
T PHA03111        281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD  318 (444)
T ss_pred             HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence            455666665544333221  124899999999999854

>PRK10593 hypothetical protein; Provisional

Probab=91.65  E-value=2.3  Score=28.26  Aligned_cols=45  Identities=22%  Similarity=0.204  Sum_probs=33.1

Q ss_pred             hHHHHHHHHHHhhCC-C--CCccceeeeeee--CCCeEEEEEeccCCCCH
Q psy4991          15 PRHALREYNIHKALD-H--PRVVKLYDVFEI--DANSFCTVLEYCDGHDL   59 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~-h--~~i~~~~~~~~~--~~~~~~lv~e~~~~~~L   59 (122)
                      ...+..|...++.+. .  ..++++++.+..  ..+..+++||++++.++
T Consensus        51 ~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         51 PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence            357889999998883 2  468888887642  23557899999997655

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=91.00  E-value=0.12  Score=35.32  Aligned_cols=16  Identities=38%  Similarity=0.567  Sum_probs=14.0

Q ss_pred             CeeeeCCCCCCccccc
Q psy4991         106 PVIHYDLKPGKPLFLF  121 (122)
Q Consensus       106 ~i~h~dlk~~nill~~  121 (122)
                      .++|.||||.|||+-+
T Consensus       299 nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  299 NFLHVDLKPDNILIFD  314 (434)
T ss_pred             eeeecccCcCcEEEec
Confidence            4899999999999854

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=89.48  E-value=3.1  Score=25.76  Aligned_cols=48  Identities=19%  Similarity=0.126  Sum_probs=30.9

Q ss_pred             chHHHHHHHHHHhhCCCC--Cccceeeeee--eCCCeEEEEEeccCCCCHHH
Q psy4991          14 FPRHALREYNIHKALDHP--RVVKLYDVFE--IDANSFCTVLEYCDGHDLDF   61 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~--~i~~~~~~~~--~~~~~~~lv~e~~~~~~L~~   61 (122)
                      ....+.+|..+++.+...  .+..++....  ......++++++++|.++..
T Consensus        33 ~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   33 AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            346677888888887422  3566666432  12345789999999877776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG2268|consensus

Probab=87.63  E-value=0.94  Score=31.16  Aligned_cols=82  Identities=23%  Similarity=0.234  Sum_probs=49.9

Q ss_pred             hHHHHHHHHHHhhCC-CC-CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALD-HP-RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQ   92 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~-h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (122)
                      +-+..+|...|+.+. |. .++..++     -+..++|||++.+-+|.+.-.-..+                  ..+...
T Consensus       154 Rlaa~kEfafmkaL~e~gfpVPkpiD-----~~RH~Vvmelv~g~Pl~~v~~v~d~------------------~~ly~~  210 (465)
T KOG2268|consen  154 RLAATKEFAFMKALYERGFPVPKPID-----HNRHCVVMELVDGYPLRQVRHVEDP------------------PTLYDD  210 (465)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCccc-----ccceeeHHHhhcccceeeeeecCCh------------------HHHHHH
Confidence            445567888888874 32 2333332     3457789999998777654321111                  122222


Q ss_pred             HHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          93 VVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        93 i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +..-+.-|-..|  ++|+|..-=||++++
T Consensus       211 lm~~Iv~la~~G--lIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  211 LMGLIVRLANHG--LIHGDFNEFNIMVKD  237 (465)
T ss_pred             HHHHHHHHHHcC--ceecccchheeEEec
Confidence            333344556678  999999988999874

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=87.55  E-value=4.2  Score=25.61  Aligned_cols=38  Identities=37%  Similarity=0.579  Sum_probs=23.2

Q ss_pred             HHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991          18 ALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLD   60 (122)
Q Consensus        18 ~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~   60 (122)
                      ..+|..++..+. +.-.+.+++...  .   .+++||++|.++.
T Consensus        42 ~~~E~~~~~~l~~~gl~P~v~~~~~--~---~~l~e~i~G~~l~   80 (235)
T cd05157          42 RERELRIHKLLSKHGLAPKLYATFQ--N---GLIYEFIPGRTLE   80 (235)
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEeC--C---cEEEEeeCCCcCC
Confidence            346888888874 333344444332  2   3799999986653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=85.51  E-value=0.7  Score=30.02  Aligned_cols=26  Identities=15%  Similarity=0.119  Sum_probs=20.2

Q ss_pred             HHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.-.|+.....+|+|..|+||+-+.
T Consensus       153 ~L~~fH~~~~~~lHGD~np~NiM~D~  178 (308)
T PF07387_consen  153 DLMDFHSENQHCLHGDCNPDNIMCDK  178 (308)
T ss_pred             HHHHhhccCCCeecCCCChhheeecC
Confidence            45556765556999999999999764

The function of this family is unknown.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=85.10  E-value=1.8  Score=30.86  Aligned_cols=40  Identities=15%  Similarity=-0.009  Sum_probs=35.4

Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      ..|+..+...+.++.+..-+|..|  -.-+|..++|+|++++
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~  153 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDD  153 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecC
Confidence            456778899999999999999999  8889999999999764

>PRK10593 hypothetical protein; Provisional

Probab=85.01  E-value=0.52  Score=31.28  Aligned_cols=17  Identities=12%  Similarity=-0.033  Sum_probs=15.1

Q ss_pred             CCCeeeeCCCCCCcccc
Q psy4991         104 KPPVIHYDLKPGKPLFL  120 (122)
Q Consensus       104 ~~~i~h~dlk~~nill~  120 (122)
                      .+.++|+|+.+.|++++
T Consensus       192 ~psLlHGDlw~gNvl~~  208 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKD  208 (297)
T ss_pred             CCeeEeCCCCcccEEEC
Confidence            46699999999999986

>KOG1236|consensus

Probab=84.64  E-value=4.3  Score=29.00  Aligned_cols=59  Identities=24%  Similarity=0.263  Sum_probs=36.0

Q ss_pred             EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCcccc
Q psy4991          47 FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        47 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~  120 (122)
                      ..++-+|..|-++..+++.. ..++.-            ...++.--+.++--|-. .+  ++|.|+.|.||++.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~-~~pe~l------------~kkva~lg~~AllkMl~vDN--FvHaDlHPGNVlir  379 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWK-SQPEAL------------VKKVAKLGVNALLKMLIVDN--FVHADLHPGNVLIR  379 (565)
T ss_pred             ceeeeeccccccHHhhhhcc-cChHHH------------HHHHHHHHHHHHHHHHHhhc--ceecccCCCcEEEE
Confidence            34566788888888888753 222211            23444444444433322 35  99999999999985

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=81.39  E-value=0.88  Score=29.90  Aligned_cols=16  Identities=38%  Similarity=0.495  Sum_probs=14.3

Q ss_pred             CeeeeCCCCCCccccc
Q psy4991         106 PVIHYDLKPGKPLFLF  121 (122)
Q Consensus       106 ~i~h~dlk~~nill~~  121 (122)
                      .++|+|+.|.||+++.
T Consensus       186 ~lvHGD~~~~Nilv~~  201 (276)
T cd05152         186 VLVHGDLHPGHILIDE  201 (276)
T ss_pred             eeEeCCCCCCcEEEeC
Confidence            4899999999999975

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=81.14  E-value=0.82  Score=28.85  Aligned_cols=16  Identities=25%  Similarity=0.306  Sum_probs=14.2

Q ss_pred             CeeeeCCCCCCccccc
Q psy4991         106 PVIHYDLKPGKPLFLF  121 (122)
Q Consensus       106 ~i~h~dlk~~nill~~  121 (122)
                      .++|+|+.+.||+++.
T Consensus       171 ~l~H~Dl~~~Nil~~~  186 (235)
T cd05157         171 VFCHNDLLSGNIIYNE  186 (235)
T ss_pred             EEEcCCCCcCcEEEeC
Confidence            3899999999999874

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=80.97  E-value=0.89  Score=29.25  Aligned_cols=39  Identities=28%  Similarity=0.330  Sum_probs=24.1

Q ss_pred             HHHHHHHHHhhCCCCCc-cceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991          17 HALREYNIHKALDHPRV-VKLYDVFEIDANSFCTVLEYCDGHDLD   60 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~lv~e~~~~~~L~   60 (122)
                      +..+|.++++.+...++ ..++....     -++++||++|.++.
T Consensus        37 ~r~~E~~~l~~l~~~g~~P~~i~~~~-----~~~v~e~i~G~~~~   76 (256)
T TIGR02721        37 DRQREYQILQALSALGLAPKPILVNE-----HWLLVEWLEGEVIT   76 (256)
T ss_pred             cHHHHHHHHHHHHhcCCCCceEEEeC-----CEEEEEeccCcccc
Confidence            35678888888853333 34443332     24799999976553

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=80.62  E-value=4  Score=26.88  Aligned_cols=40  Identities=23%  Similarity=0.304  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHhhCCCC-CccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991          16 RHALREYNIHKALDHP-RVVKLYDVFEIDANSFCTVLEYCDGHDLD   60 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~-~i~~~~~~~~~~~~~~~lv~e~~~~~~L~   60 (122)
                      .+..+|..++..+... -...+++.+. +    .+++||++|.++.
T Consensus        45 ~~r~~E~~~~~~l~~~g~~P~~~~~~~-~----~~v~e~i~G~~l~   85 (302)
T cd05156          45 IDRERELVVFARLSERNLGPKLYGIFP-N----GRIEEFIPSRTLT   85 (302)
T ss_pred             echHHHHHHHHHHHhCCCCCceEEEeC-C----CchhheeCCCcCC
Confidence            4556788888877432 2345555543 2    2588999876654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	122
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-08
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		5e-08
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-07
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-07
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-07
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		4e-07
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-07
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		9e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		9e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		9e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-06
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-06
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-06
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-06
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-06
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-06
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-06
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		4e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		4e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		4e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-05
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-05
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		6e-05
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-05
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		6e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		6e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		6e-05
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-05
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		7e-05
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-05
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-05
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		7e-05
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		7e-05
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		7e-05
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		7e-05
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-05
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		7e-05
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		7e-05
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		8e-05
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		8e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-04
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		5e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		9e-04

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  ++EY  G ++  YL  H 
Sbjct: 48  TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHG 106
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+E            ARS   Q+VSA++Y ++ +  ++H DLK
Sbjct: 107 RMKEKE------------ARSKFRQIVSAVQYCHQKR--IVHRDLK 138

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  ++EY  G ++  YL  H 
Sbjct: 51  TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHG 109
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+E            ARS   Q+VSA++Y ++ +  ++H DLK
Sbjct: 110 RMKEKE------------ARSKFRQIVSAVQYCHQKR--IVHRDLK 141

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 43  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 101
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 102 WMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 133

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 109 RMKEKEARAKFR------------QIVSAVQYCHQ--KFIVHRDLK 140

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  + K+LDHP ++K+++VFE D ++   V+E C+G +    L +    A+   + LS+ 
Sbjct: 70  EIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGE----LLERIVSAQARGKALSEG 124
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           Y++     ++ Q+++AL Y +     V+H DLKP   LF
Sbjct: 125 YVA----ELMKQMMNALAYFH--SQHVVHKDLKPENILF 157

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V+EY  G ++  YL  H 
Sbjct: 51  TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL-VMEYASGGEVFDYLVAHG 109
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
            + E+EAR   +            Q+VSA++Y ++    ++H DLK
Sbjct: 110 RMKEKEARAKFR------------QIVSAVQYCHQ--KYIVHRDLK 141

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 8   TNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           T LN    +   RE  I K L+HP +VKL++V E +   +  V EY  G ++  YL  H 
Sbjct: 50  TQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYL-VXEYASGGEVFDYLVAHG 108
Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
              E+E            AR+   Q+VSA++Y ++    ++H DLK
Sbjct: 109 RXKEKE------------ARAKFRQIVSAVQYCHQ--KFIVHRDLK 140

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  I K+LDHP +++LY+ FE D      V+E C G +L F    HK +          
Sbjct: 72  QEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGEL-FERVVHKRV---------- 119
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
            +  + A  I+  V+SA+ Y +++   V H DLKP   LFL
Sbjct: 120 -FRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFL 157

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  I K+LDHP +++LY+ FE D      V+E C G +L F    HK +          
Sbjct: 55  QEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGEL-FERVVHKRV---------- 102
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
            +  + A  I+  V+SA+ Y +++   V H DLKP   LFL
Sbjct: 103 -FRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFL 140

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KL+++ E D++SF  V E   G +L   + + K  +E +A    
Sbjct: 69  LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV S + Y++  K  ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAER 72
           F      E ++ K+LDHP ++KL+DVFE D   F  V E+ +G +L +  + +HK     
Sbjct: 89  FHEEIYNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHK----- 142
Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                   +    A +I+ Q++S + YL+  K  ++H D+KP
Sbjct: 143 --------FDECDAANIMKQILSGICYLH--KHNIVHRDIKP 174

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KLY+ FE D   F  V E   G +L   +   K  +E +A    
Sbjct: 97  LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 151
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV+S + Y+++ K  ++H DLKP
Sbjct: 152 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 177

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KLY+ FE D   F  V E   G +L   +   K  +E +A    
Sbjct: 74  LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 128
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV+S + Y+++ K  ++H DLKP
Sbjct: 129 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 154

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KLY+ FE D   F  V E   G +L   +   K  +E +A    
Sbjct: 98  LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 152
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV+S + Y+++ K  ++H DLKP
Sbjct: 153 -------AR-IIRQVLSGITYMHKNK--IVHRDLKP 178

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KL+++ E D++SF  V E   G +L   + + K  +E +A    
Sbjct: 69  LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV S + Y++  K  ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KL+++ E D++SF  V E   G +L   + + K  +E +A    
Sbjct: 69  LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---- 123
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV S + Y++  K  ++H DLKP
Sbjct: 124 -------AR-IIKQVFSGITYMH--KHNIVHRDLKP 149

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E +I  + DHP +VKL D F  + N+   ++E+C G  +D  + +           L +P
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
              +  + +  Q + AL YL++ K  +IH DLK G  LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E +I  + DHP +VKL D F  + N+   ++E+C G  +D  + +           L +P
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
              +  + +  Q + AL YL++ K  +IH DLK G  LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E +I  + DHP +VKL D F  + N+   ++E+C G  +D  + +           L +P
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAVMLE-----------LERP 131
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
              +  + +  Q + AL YL++ K  +IH DLK G  LF
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 168

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KLY+ FE D   F  V E   G +L   +   K  +E +A    
Sbjct: 80  LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 134
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV+S + Y++  K  ++H DLKP
Sbjct: 135 -------AR-IIRQVLSGITYMH--KNKIVHRDLKP 160

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  + K LDHP ++KLYD FE   N +  +  Y  G   D  + + K           
Sbjct: 84  LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK----------- 132
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             +    A  I+ QV+S + YL+  K  ++H DLKP
Sbjct: 133 --FNEVDAAVIIKQVLSGVTYLH--KHNIVHRDLKP 164

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  + L HP ++KLYDV +   +    V+EY  G++L  Y+ Q   ++E+EAR   Q
Sbjct: 53  REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 110
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA++Y +  K  ++H DLKP
Sbjct: 111 ------------QIISAVEYCHRHK--IVHRDLKP 131

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  + L HP ++KLYDV +   +    V+EY  G++L  Y+ Q   ++E+EAR   Q
Sbjct: 63  REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 120
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA++Y +  K  ++H DLKP
Sbjct: 121 ------------QIISAVEYCHRHK--IVHRDLKP 141

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  + L HP ++KLYDV +   +    V+EY  G++L  Y+ Q   ++E+EAR   Q
Sbjct: 62  REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 119
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA++Y +  K  ++H DLKP
Sbjct: 120 ------------QIISAVEYCHRHK--IVHRDLKP 140

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  + L HP ++KLYDV +   +    V+EY  G++L  Y+ Q   ++E+EAR   Q
Sbjct: 57  REISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQ 114
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA++Y +  K  ++H DLKP
Sbjct: 115 ------------QIISAVEYCHRHK--IVHRDLKP 135

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP + KLY+ FE D   F  V E   G +L   +   K  +E +A    
Sbjct: 74  LREVQLLKQLDHPNIXKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---- 128
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  AR I+ QV+S + Y ++ K  ++H DLKP
Sbjct: 129 -------AR-IIRQVLSGITYXHKNK--IVHRDLKP 154

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE    K   HP ++KLY V     + F  V+EY  G +L  Y+ +H  + E EAR L Q
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA+ Y +  +  V+H DLKP
Sbjct: 119 ------------QILSAVDYCH--RHMVVHRDLKP 139

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE    K   HP ++KLY V     + F  V+EY  G +L  Y+ +H  + E EAR L Q
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ 118
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA+ Y +  +  V+H DLKP
Sbjct: 119 ------------QILSAVDYCH--RHMVVHRDLKP 139

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + HP ++ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  + K LDHP ++KLY+ FE   N +  +  Y  G   D  +             L 
Sbjct: 52  LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-------------LR 98
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           Q +    A  I+ QV+S   YL+  K  ++H DLKP
Sbjct: 99  QKFSEVDAAVIMKQVLSGTTYLH--KHNIVHRDLKP 132

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  IH  L HP +++LY+ FE D+N    VLE C   +++ YLK              +P
Sbjct: 61  EVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNR-----------VKP 108
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
           +    AR  + Q+++ + YL+     ++H DL
Sbjct: 109 FSENEARHFMHQIITGMLYLHS--HGILHRDL 138

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE NI + + HP ++ L+D+FE +      +LE   G +L  +L + +++ E E      
Sbjct: 57  REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 109
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q++  + YL+  +  + H+DLKP   + L
Sbjct: 110 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 142

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE NI + + HP ++ L+D+FE +      +LE   G +L  +L + +++ E E      
Sbjct: 64  REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q++  + YL+  +  + H+DLKP   + L
Sbjct: 117 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 149

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  + K LDHP ++KLY+ FE   N +  +  Y  G   D  +             L 
Sbjct: 69  LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-------------LR 115
Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           Q +    A  I+ QV+S   YL+  K  ++H DLKP
Sbjct: 116 QKFSEVDAAVIMKQVLSGTTYLH--KHNIVHRDLKP 149

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE NI + + HP ++ L+D+FE +      +LE   G +L  +L + +++ E E      
Sbjct: 78  REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKESLTEDE------ 130
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q++  + YL+  +  + H+DLKP   + L
Sbjct: 131 ------ATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLL 163

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  IHK+LD+P VV  +  FE D +    VLE C    L    K+ K + E EAR   + 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                      Q +  ++YL+  +  VIH DLK G  LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  IHK+LD+P VV  +  FE D +    VLE C    L    K+ K + E EAR   + 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                      Q +  ++YL+  +  VIH DLK G  LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  IHK+LD+P VV  +  FE D +    VLE C    L    K+ K + E EAR   + 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 149
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                      Q +  ++YL+  +  VIH DLK G  LFL
Sbjct: 150 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 175

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E  IHK+LD+P VV  +  FE D +    VLE C    L    K+ K + E EAR   + 
Sbjct: 76  EIAIHKSLDNPHVVGFHGFFE-DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR- 133
Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                      Q +  ++YL+  +  VIH DLK G  LFL
Sbjct: 134 -----------QTIQGVQYLHNNR--VIHRDLKLGN-LFL 159

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           E  I K L+HP VV   +V +    +  N      +EYC+G DL  YL Q +     +  
Sbjct: 63  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-- 120
Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      R+++  + SAL+YL+E +  +IH DLKP
Sbjct: 121 -------EGPIRTLLSDISSALRYLHENR--IIHRDLKP 150

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 21  EYNIHKALDHPRVVKLYDVFE----IDANSF-CTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           E  I K L+HP VV   +V +    +  N      +EYC+G DL  YL Q +     +  
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK-- 119
Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      R+++  + SAL+YL+E +  +IH DLKP
Sbjct: 120 -------EGPIRTLLSDISSALRYLHENR--IIHRDLKP 149

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  K L HP ++KLYDV     +    V+EY  G   D Y+ + K + E E R   Q
Sbjct: 58  REISYLKLLRHPHIIKLYDVITTPTD-IVMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++ A++Y +  K  ++H DLKP
Sbjct: 116 ------------QIICAIEYCHRHK--IVHRDLKP 136

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + H  V+ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + H  V+ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + H  V+ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + H  V+ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 62  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 114
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 115 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 147

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I + + H  V+ L+DV+E +      +LE   G +L  +L Q ++++E E      
Sbjct: 64  REVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESLSEEE------ 116
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A S + Q++  + YL+  K  + H+DLKP   + L
Sbjct: 117 ------ATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLL 149

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 62  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 114
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 115 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 147

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 30  HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSI 89
           HP +VKL++VF    ++F  V+E  +G +L   +K+ K  +E            T A  I
Sbjct: 65  HPNIVKLHEVFHDQLHTFL-VMELLNGGELFERIKKKKHFSE------------TEASYI 111
Query: 90  VMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           + ++VSA+ +++++   V+H DLKP   LF
Sbjct: 112 MRKLVSAVSHMHDV--GVVHRDLKPENLLF 139

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE    K   HP ++KLY V    ++ F  V+EY  G +L  Y+ ++  + E+E+R L Q
Sbjct: 65  REIQNLKLFRHPHIIKLYQVISTPSDIF-MVMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++S + Y +  +  V+H DLKP
Sbjct: 124 ------------QILSGVDYCH--RHMVVHRDLKP 144

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 53  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 106
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 107 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 135

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 78  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 54  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 107
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 108 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 136

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 75  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 128
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 129 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 157

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 81  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 134
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 135 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 163

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 75  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 128
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 129 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 157

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 78  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 78  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 60  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 113
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 114 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 142

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 76  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 76  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 56  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 109
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 110 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 138

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 76  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 55  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 108
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 109 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 137

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 78  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 79  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 132
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 133 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 161

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 76  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 129
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 130 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 158

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 78  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 131
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 132 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 160

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 79  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 132
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 133 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 161

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           E ++   LDH  +++LYD FE   N    V+EY DG +L               R + + 
Sbjct: 136 EISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGEL-------------FDRIIDES 181
Query: 81  YLSTSARSIVM--QVVSALKYLNEIKPPVIHYDLKP 114
           Y  T   +I+   Q+   +++++++   ++H DLKP
Sbjct: 182 YNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKP 215

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD----FYLKQHKTIAEREA 74
           ++E ++ K L+HP V+K Y  F I+ N    VLE  D  DL      + KQ + I ER  
Sbjct: 80  IKEIDLLKQLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER-- 136
Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                     +     +Q+ SAL++++  +  V+H D+KP 
Sbjct: 137 ----------TVWKYFVQLCSALEHMHSRR--VMHRDIKPA 165

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 29/114 (25%)
Query: 16  RHALREYNIHKALDHPRVVKLYDVFE-------------IDANSFCTVLEYCDGHDLDFY 62
           +HALRE  I + LDH  +VK++++                + NS   V EY +  DL   
Sbjct: 53  KHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV 111
Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGK 116
           L+Q              P L   AR  + Q++  LKY++     V+H DLKP  
Sbjct: 112 LEQ-------------GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPAN 150

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D   +   L Y    +L  Y+++  +  E     
Sbjct: 83  YVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFG-LSYAKNGELLKYIRKIGSFDE----- 136
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  T  R    ++VSAL+YL+     +IH DLKP
Sbjct: 137 -------TCTRFYTAEIVSALEYLH--GKGIIHRDLKP 165

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I K + HP V+ L++V+E +      + E   G +L  +L + +++ E E      
Sbjct: 63  REVSILKEIQHPNVITLHEVYE-NKTDVILIGELVAGGELFDFLAEKESLTEEE------ 115
Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                 A   + Q+++ + YL+ ++  + H+DLKP   + L
Sbjct: 116 ------ATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLL 148

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 26  KALDHPRVVKLYDVFEIDANSF-CTVL--EYCDGHDLDFYLKQHKTIAEREARCLSQPYL 82
           K L HP +V+ YD +E       C VL  E      L  YLK+ K     + + L     
Sbjct: 80  KGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX---KIKVL----- 131
Query: 83  STSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
               RS   Q++  L++L+   PP+IH DLK
Sbjct: 132 ----RSWCRQILKGLQFLHTRTPPIIHRDLK 158

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +  +E  AR 
Sbjct: 194 HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 252
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL YL+  K  V++ DLK
Sbjct: 253 YGA------------EIVSALDYLHSEK-NVVYRDLK 276

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +  +E  AR 
Sbjct: 197 HTLTENRVLQNSRHPFLTALKYSFQTH-DRLCFVMEYANGGELFFHLSRERVFSEDRARF 255
Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                          ++VSAL YL+  K  V++ DLK
Sbjct: 256 YGA------------EIVSALDYLHSEK-NVVYRDLK 279

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P  A+RE ++ K L H  +V+LYDV   + N    V E+ D +DL  Y+   +T+     
Sbjct: 47  PSTAIREISLMKELKHENIVRLYDVIHTE-NKLTLVFEFMD-NDLKKYMDS-RTVGN-TP 102
Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           R L    +    +    Q++  L + +E K  ++H DLKP
Sbjct: 103 RGLELNLV----KYFQWQLLQGLAFCHENK--ILHRDLKP 136

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	122
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-18
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-18
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-18
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-17
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-17
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-17
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-16
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-16
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-16
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-16
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-15
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-15
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-15
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-15
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-15
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-15
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-15
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-15
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-14
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-14
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-14
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-14
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-13
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-13
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-13
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-13
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-13
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-13
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-13
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-13
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-13
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-13
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	8e-13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-13
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-12
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-12
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-12
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-12
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	7e-12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-12
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-12
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-11
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-11
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-10
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-10
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	8e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	8e-10
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-09
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-09
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-09
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-08
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-08
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	8e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	8e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-07
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	8e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-07
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-06
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	7e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	7e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	8e-04

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 80.4 bits (199), Expect = 2e-19
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 16/101 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E +IH++L H  VV  +  FE D +    VLE C    L    K+ K + E EAR   +
Sbjct: 90  MEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 148

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       Q+V   +YL+  +  VIH DLK G  LFL
Sbjct: 149 ------------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 174

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 79.9 bits (198), Expect = 2e-19
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 16/101 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E +IH++L H  VV  +  FE D +    VLE C    L    K+ K + E EAR   +
Sbjct: 64  MEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR 122

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
                       Q+V   +YL+  +  VIH DLK G  LFL
Sbjct: 123 ------------QIVLGCQYLHRNR--VIHRDLKLGN-LFL 148

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 78.3 bits (193), Expect = 1e-18
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 19  LREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIA---EREA 74
           +RE+ + K L+H  +VKL+ + E         ++E+C    L   L++        E E 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE- 113

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                         ++  VV  + +L E    ++H ++KPG
Sbjct: 114 -----------FLIVLRDVVGGMNHLRENG--IVHRNIKPG 141

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 78.0 bits (192), Expect = 3e-18
 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIA---EREA 74
           +RE+ + K L+H  +VKL+ + E         ++E+C    L   L++        E E 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE- 113

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                         ++  VV  + +L E    ++H ++KPG
Sbjct: 114 -----------FLIVLRDVVGGMNHLRENG--IVHRNIKPG 141

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 76.2 bits (188), Expect = 5e-18
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 19  LREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
             E      L     ++++LYD           V+E  +  DL+ +LK+ K+I   E   
Sbjct: 74  RNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSIDPWE--- 128

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     +S    ++ A+  +++    ++H DLKP
Sbjct: 129 ---------RKSYWKNMLEAVHTIHQHG--IVHSDLKP 155

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 76.3 bits (188), Expect = 7e-18
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 19  LREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
             E      L     ++++LYD           V+E  +  DL+ +LK+ K+I   E   
Sbjct: 55  RNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSIDPWE--- 109

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     +S    ++ A+  +++    ++H DLKP
Sbjct: 110 ---------RKSYWKNMLEAVHTIHQHG--IVHSDLKP 136

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 75.5 bits (186), Expect = 2e-17
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 13/99 (13%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
             + RE  +   + HP +V+  + FE +  S   V++YC+G DL   +   K +  +E +
Sbjct: 68  EESRREVAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                          +Q+  ALK++++ K  ++H D+K 
Sbjct: 127 ----------ILDWFVQICLALKHVHDRK--ILHRDIKS 153

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 75.2 bits (185), Expect = 2e-17
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 19  LREYNIHKALDHP--RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
             E      L     ++++LYD           V+E  +  DL+ +LK+ K+I   E   
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMECGNI-DLNSWLKKKKSIDPWE--- 156

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     +S    ++ A+  +++    ++H DLKP
Sbjct: 157 ---------RKSYWKNMLEAVHTIHQHG--IVHSDLKP 183

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 73.9 bits (182), Expect = 4e-17
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANSF-----------CTVLEYCDGHDLDFYLKQH 66
            +RE      L+HP +V+ ++ +     +               ++ C   +L  ++   
Sbjct: 50  VMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR 109

Query: 67  KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            TI ERE               I +Q+  A+++L+     ++H DLKP 
Sbjct: 110 CTIEERERSV---------CLHIFLQIAEAVEFLHSKG--LMHRDLKPS 147

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 73.5 bits (181), Expect = 5e-17
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           +  + E N+ + L HP +V+ YD   +    +   V+EYC+G DL   + +      +E 
Sbjct: 50  QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT----KER 105

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYL---NEIKPPVIHYDLKP 114
           + L + +       ++ Q+  ALK     ++    V+H DLKP
Sbjct: 106 QYLDEEF----VLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 73.6 bits (180), Expect = 1e-16
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 22/103 (21%)

Query: 20  REYNIHKALDHPRVVKLYDVFE-----IDANSFCTVLEYCDGHDLDFYLKQHKTIA---E 71
            E  I K L+HP VV   +V +        +     +EYC+G DL  YL Q +      E
Sbjct: 61  LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              R L               + SAL+YL+E +  +IH DLKP
Sbjct: 121 GPIRTLLS------------DISSALRYLHENR--IIHRDLKP 149

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 72.6 bits (179), Expect = 1e-16
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 16/97 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH-KTIAEREARCLS 78
            E  IH  L HP +++LY+ FE D+N    VLE C   +++ YLK   K  +E EAR   
Sbjct: 60  NEVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-- 116

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                      + Q+++ + YL+     ++H DL   
Sbjct: 117 ----------FMHQIITGMLYLHSHG--ILHRDLTLS 141

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 72.8 bits (179), Expect = 1e-16
 Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  I   + +   +    +   + +    + EY +   +  + +    + +     +  
Sbjct: 92  NELQIITDIKNEYCLTCEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  + I+  V+++  Y++  K  + H D+KP
Sbjct: 151 QV----IKCIIKSVLNSFSYIHNEK-NICHRDVKP 180

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           A RE ++H+  +HP +++L      +  +      +L +     L   +++ K       
Sbjct: 73  AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-- 130

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             L++         +++ +   L+ ++       H DLKP
Sbjct: 131 --LTEDQ----ILWLLLGICRGLEAIH--AKGYAHRDLKP 162

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 72.2 bits (177), Expect = 3e-16
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCL 77
            +E      L HP +V L+D FE D N    + E+  G +L +    +H  ++E E    
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDE---- 256

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                   A   + QV   L +++E     +H DLKP
Sbjct: 257 --------AVEYMRQVCKGLCHMHENN--YVHLDLKP 283

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 72.0 bits (177), Expect = 4e-16
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 16/95 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  I K L+HP ++K+ + F+  A  +  VLE  +G +L   +  +K + E        
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEAT------ 240

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  +    Q++ A++YL+E    +IH DLKP
Sbjct: 241 ------CKLYFYQMLLAVQYLHENG--IIHRDLKP 267

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 71.6 bits (176), Expect = 4e-16
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KL+++ E D++SF  V E   G +L   + + K  +E +     
Sbjct: 69  LREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHD----- 122

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A  I+ QV S + Y+++    ++H DLKP
Sbjct: 123 -------AARIIKQVFSGITYMHKHN--IVHRDLKP 149

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 71.6 bits (176), Expect = 4e-16
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + K LDHP ++KLY+ FE D   F  V E   G +L   +   K  +E +     
Sbjct: 74  LREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVD----- 127

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A  I+ QV+S + Y+++ K  ++H DLKP
Sbjct: 128 -------AARIIRQVLSGITYMHKNK--IVHRDLKP 154

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 71.7 bits (176), Expect = 5e-16
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  + K LDHP ++KLYD FE D  ++  V+E   G +L   +       E +     
Sbjct: 84  LEEVAVLKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRMKFNEVD----- 137

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A  I+ QV+S + YL++    ++H DLKP
Sbjct: 138 -------AAVIIKQVLSGVTYLHKHN--IVHRDLKP 164

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  I K+LDHP +++LY+ FE D      V+E C G +L   +   +   E +      
Sbjct: 55  QEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKRVFRESD------ 107

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A  I+  V+SA+ Y +++   V H DLKP
Sbjct: 108 ------AARIMKDVLSAVAYCHKLN--VAHRDLKP 134

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 70.5 bits (173), Expect = 1e-15
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
             E ++ K+LDHP ++KL+DVFE D   F  V E+ +G +L   +       E +     
Sbjct: 94  YNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHKFDECD----- 147

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A +I+ Q++S + YL++    ++H D+KP
Sbjct: 148 -------AANIMKQILSGICYLHKHN--IVHRDIKP 174

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE  I K L+HP +VKL++V E +   +  ++EY  G ++  YL  H  + E+EAR   +
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYL-IMEYASGGEVFDYLVAHGRMKEKEARSKFR 121

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q+VSA++Y ++ +  ++H DLK 
Sbjct: 122 ------------QIVSAVQYCHQKR--IVHRDLKA 142

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 69.7 bits (171), Expect = 2e-15
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCL 77
             E ++   LDH  +++LYD FE   N    V+EY DG +L D  + +   + E +    
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGELFDRIIDESYNLTELD---- 188

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       + Q+   +++++++   ++H DLKP
Sbjct: 189 --------TILFMKQICEGIRHMHQMY--ILHLDLKP 215

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              ++E ++ K L+HP V+K Y  F I+ N    VLE  D  DL   +K  K    ++ R
Sbjct: 77  ADCIKEIDLLKQLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFK----KQKR 131

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            + +  +        +Q+ SAL++++  +  V+H D+KP
Sbjct: 132 LIPERTV----WKYFVQLCSALEHMHSRR--VMHRDIKP 164

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 69.7 bits (171), Expect = 2e-15
 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE  I + L HP +V+L+D  + + +    V +   G +L   +   +  +E +      
Sbjct: 77  REARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEAD------ 129

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A   + Q++ ++ Y +     ++H +LKP
Sbjct: 130 ------ASHCIQQILESIAYCHSNG--IVHRNLKP 156

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 68.9 bits (169), Expect = 3e-15
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 18/96 (18%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF-YLKQHKTIAEREARCLS 78
            E  I K L+HP ++K+ + F+  A  +  VLE  +G +L F  +  +K + E       
Sbjct: 64  TEIEILKKLNHPCIIKIKNFFD--AEDYYIVLELMEGGEL-FDKVVGNKRLKEAT----- 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                   +    Q++ A++YL+E    +IH DLKP
Sbjct: 116 -------CKLYFYQMLLAVQYLHENG--IIHRDLKP 142

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 68.5 bits (168), Expect = 3e-15
 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 31/115 (26%)

Query: 18  ALREYNIHKALDHPRVVKLYDVFE---------------IDANSFCTVLEYCDGHDLDFY 62
           A RE      LDH  +V     ++                        +E+CD   L+ +
Sbjct: 51  AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110

Query: 63  LKQHK--TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +++ +   + +              A  +  Q+   + Y++  K  +I+ DLKP 
Sbjct: 111 IEKRRGEKLDKVL------------ALELFEQITKGVDYIHSKK--LINRDLKPS 151

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
              RE  I   L HP +++LY  F      +  +LEY     +   L++     E+    
Sbjct: 55  QLRREVEIQSHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKLSKFDEQRTAT 113

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                          ++ +AL Y +  +  VIH D+KP
Sbjct: 114 YIT------------ELANALSYCHSKR--VIHRDIKP 137

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 68.6 bits (168), Expect = 5e-15
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCL 77
             E +I   L HP+++ L+D FE D      +LE+  G +L D    +   ++E E    
Sbjct: 96  KNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAE---- 150

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     + + Q    LK+++E    ++H D+KP
Sbjct: 151 --------VINYMRQACEGLKHMHEHS--IVHLDIKP 177

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 68.1 bits (167), Expect = 6e-15
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 25/111 (22%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCT------------VLEYCDGHDLDFYL 63
              L E  +  +L+H  VV+ Y  +    N                 +EYC+   L   +
Sbjct: 47  STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  +R+               +  Q++ AL Y++     +IH DLKP
Sbjct: 107 HSENLNQQRDE-----------YWRLFRQILEALSYIHSQG--IIHRDLKP 144

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 68.0 bits (167), Expect = 6e-15
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 16/96 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
           +E +I     H  ++ L++ FE        + E+  G D+ +        + ERE     
Sbjct: 50  KEISILNIARHRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSAFELNERE----- 103

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    S V QV  AL++L+     + H+D++P
Sbjct: 104 -------IVSYVHQVCEALQFLHSHN--IGHFDIRP 130

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE  + K LDHP ++KL+++ E D++SF  V E   G +L   + + K  +E +      
Sbjct: 70  REVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKRFSEHD------ 122

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A  I+ QV S + Y+++    ++H DLKP
Sbjct: 123 ------AARIIKQVFSGITYMHKHN--IVHRDLKP 149

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 67.6 bits (166), Expect = 8e-15
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 13/96 (13%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
            E  + K+LDHP ++K+++VFE D ++   V+E C+G +L +        I   +AR   
Sbjct: 69  AEIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLER-------IVSAQAR--G 118

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +         ++ Q+++AL Y +     V+H DLKP
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKP 152

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 68.1 bits (167), Expect = 8e-15
 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE  I + L HP +V+L+D    +      + +   G +L   +   +  +E +      
Sbjct: 59  REARICRLLKHPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIVAREYYSEAD------ 111

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A   + Q++ A+ + +++   V+H +LKP
Sbjct: 112 ------ASHCIQQILEAVLHCHQMG--VVHRNLKP 138

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 67.9 bits (166), Expect = 8e-15
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 10/106 (9%)

Query: 10  LNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT 68
           + + F   AL E  +    D HP V++ Y             LE C+  +L   ++    
Sbjct: 47  MLIDFCDIALMEIKLLTESDDHPNVIRYYCSET-TDRFLYIALELCNL-NLQDLVESKNV 104

Query: 69  IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             E             +  S++ Q+ S + +L+ +K  +IH DLKP
Sbjct: 105 SDENLKL-----QKEYNPISLLRQIASGVAHLHSLK--IIHRDLKP 143

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +I   L HP +V+L + +         V E+ DG DL F       I +R       
Sbjct: 75  REASICHMLKHPHIVELLETYS-SDGMLYMVFEFMDGADLCFE------IVKRADA--GF 125

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            Y    A   + Q++ AL+Y ++    +IH D+KP
Sbjct: 126 VYSEAVASHYMRQILEALRYCHDNN--IIHRDVKP 158

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            RE +I K + HP V+ L++V+E +      +LE   G +L  +L + +++ E E     
Sbjct: 62  EREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKESLTEEE----- 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A   + Q+++ + YL+ ++  + H+DLKP
Sbjct: 116 -------ATEFLKQILNGVYYLHSLQ--IAHFDLKP 142

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 67.2 bits (165), Expect = 1e-14
 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE  I + L HP +V+L+D  + + +    V +   G +L   +   +  +E +      
Sbjct: 54  REARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREFYSEAD------ 106

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A   + Q++ ++ Y +     ++H +LKP
Sbjct: 107 ------ASHCIQQILESIAYCHSNG--IVHRNLKP 133

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 17/96 (17%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
           RE NI + + HP ++ L+D+FE +      +LE   G +L DF       +AE+E+    
Sbjct: 57  REVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDF-------LAEKES---- 104

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A   + Q++  + YL+  +  + H+DLKP
Sbjct: 105 --LTEDEATQFLKQILDGVHYLHSKR--IAHFDLKP 136

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 66.2 bits (162), Expect = 2e-14
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 16/101 (15%)

Query: 16  RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
              L E   H+ +  HP  V+L   +E +        E C    L  + +          
Sbjct: 101 ARKLAEVGSHEKVGQHPCCVRLEQAWE-EGGILYLQTELCGP-SLQQHCEAWG------- 151

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             L +          +   + AL +L+     ++H D+KP 
Sbjct: 152 ASLPEAQ----VWGYLRDTLLALAHLHSQG--LVHLDVKPA 186

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 65.8 bits (161), Expect = 3e-14
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 18  ALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           ALRE   H  L  H  VV+ +  +  + +      EYC+G  L   + ++     R    
Sbjct: 57  ALREVYAHAVLGQHSHVVRYFSAWA-EDDHMLIQNEYCNGGSLADAISENY----RIMSY 111

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             +  L    + +++QV   L+Y++ +   ++H D+KP 
Sbjct: 112 FKEAEL----KDLLLQVGRGLRYIHSMS--LVHMDIKPS 144

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.7 bits (161), Expect = 4e-14
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 19/98 (19%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCL 77
            RE +I + + H  V+ L+DV+E +      +LE   G +L D                 
Sbjct: 63  EREVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFD--------------FLA 107

Query: 78  SQPYLS-TSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +  LS   A S + Q++  + YL+  K  + H+DLKP
Sbjct: 108 QKESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKP 143

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 65.8 bits (161), Expect = 4e-14
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 17/96 (17%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
           RE +I + + HP ++ L+DV+E +      +LE   G +L DF       +A++E+    
Sbjct: 64  REVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDF-------LAQKES---- 111

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A S + Q++  + YL+  K  + H+DLKP
Sbjct: 112 --LSEEEATSFIKQILDGVNYLHTKK--IAHFDLKP 143

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 65.9 bits (161), Expect = 4e-14
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLE-YCDGHDLDFYLKQHKTIAEREARCLS 78
            E  I   ++H  ++K+ D+FE +   F  V+E +  G DL  ++ +H  + E  A  + 
Sbjct: 78  LEIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +            Q+VSA+ YL      +IH D+K 
Sbjct: 137 R------------QLVSAVGYLRLKD--IIHRDIKD 158

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 65.3 bits (160), Expect = 5e-14
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
              RE  I   L HP ++++Y+ F  D      +LE+    +L   L++H    E+ +  
Sbjct: 60  QLRREIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 118

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             +            ++  AL Y +E K  VIH D+KP
Sbjct: 119 FME------------ELADALHYCHERK--VIHRDIKP 142

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 64.7 bits (158), Expect = 1e-13
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 19/115 (16%)

Query: 3   AKLLTTNLNLPFPRHAL-REYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLD 60
                +   L   R A  RE +I + +  HP ++ L D +E  ++    V +     +L 
Sbjct: 130 TAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE-SSSFMFLVFDLMRKGEL- 187

Query: 61  F-YLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           F YL +   ++E+E             RSI+  ++ A+ +L+     ++H DLKP
Sbjct: 188 FDYLTEKVALSEKE------------TRSIMRSLLEAVSFLHANN--IVHRDLKP 228

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  A+RE ++ K L H  +V+LYDV   + N    V E+ D +DL  Y+          
Sbjct: 46  TPSTAIREISLMKELKHENIVRLYDVIHTE-NKLTLVFEFMD-NDLKKYMDSRTV----- 98

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                +       +    Q++  L + +E K  ++H DLKP
Sbjct: 99  -GNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKP 136

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 16/98 (16%)

Query: 19  LREYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARC 76
           L E  + +     PRV+ L++V+E + +    +LEY  G ++               A  
Sbjct: 76  LHEIAVLELAKSCPRVINLHEVYE-NTSEIILILEYAAGGEIFSL-------CLPELAEM 127

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +S+         ++ Q++  + YL++    ++H DLKP
Sbjct: 128 VSEND----VIRLIKQILEGVYYLHQNN--IVHLDLKP 159

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 64.4 bits (157), Expect = 2e-13
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 16/98 (16%)

Query: 18  ALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           A RE  + +  D HP V++ +   + D       +E C    L  Y++Q           
Sbjct: 64  ADREVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCAA-TLQEYVEQKDF-------- 113

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               +L     +++ Q  S L +L+ +   ++H DLKP
Sbjct: 114 ---AHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKP 146

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 64.4 bits (157), Expect = 2e-13
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 16  RHALREYNIHKAL-DHPRVVKLYDVFEIDANS-------FCTVLEYCDGHDLDFYLK--Q 65
           R  ++E    K L  HP +V+      I           F  + E C G  ++F  K   
Sbjct: 70  RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              ++                  I  Q   A+++++  KPP+IH DLK 
Sbjct: 130 RGPLSCDTVL------------KIFYQTCRAVQHMHRQKPPIIHRDLKV 166

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  +   L HP ++KL ++FE        VLE   G +L   + +    +ER+      
Sbjct: 97  TEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVTGGELFDRIVEKGYYSERD------ 149

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A   V Q++ A+ YL+E    ++H DLKP
Sbjct: 150 ------AADAVKQILEAVAYLHENG--IVHRDLKP 176

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P   +RE +I K L H  +VKLYDV          V E+ D  DL   L   +      
Sbjct: 43  IPSTTIREISILKELKHSNIVKLYDVIHTK-KRLVLVFEHLD-QDLKKLLDVCE------ 94

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    S +A+S ++Q+++ + Y ++ +  V+H DLKP
Sbjct: 95  -----GGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKP 128

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 63.7 bits (155), Expect = 2e-13
 Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 31/123 (25%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  + K L HP + +LY+V+E D    C V+E C G  L   L      +  +      
Sbjct: 77  TEVRLMKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135

Query: 80  PYLSTS----------------------------ARSIVMQVVSALKYLNEIKPPVIHYD 111
                                               +I+ Q+ SAL YL+     + H D
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRD 193

Query: 112 LKP 114
           +KP
Sbjct: 194 IKP 196

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +E  I K LDHP VVKL +V +    +    V E  +   +   +   K ++E +AR   
Sbjct: 85  QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-MEVPTLKPLSEDQARFYF 143

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           Q             ++  ++YL+  K  +IH D+KP
Sbjct: 144 Q------------DLIKGIEYLHYQK--IIHRDIKP 165

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE    K   HP ++KLY V     + F  V+EY  G +L  Y+ +H  + E EAR L Q
Sbjct: 60  REIQNLKLFRHPHIIKLYQVISTPTDFFM-VMEYVSGGELFDYICKHGRVEEMEARRLFQ 118

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++SA+ Y +     V+H DLKP
Sbjct: 119 ------------QILSAVDYCHRHM--VVHRDLKP 139

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 16/101 (15%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  A+RE ++ K L H  +++L  V     +    + EY + +DL  Y+ ++  ++ R 
Sbjct: 76  VPGTAIREVSLLKELQHRNIIELKSVI-HHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRV 133

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +              + Q+++ + + +  +   +H DLKP
Sbjct: 134 IKSF------------LYQLINGVNFCHSRR--CLHRDLKP 160

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 63.3 bits (155), Expect = 3e-13
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  A+RE ++ K L HP +V L DV          V E+ +  DL   L ++K      
Sbjct: 62  IPSTAIREISLLKELHHPNIVSLIDVI-HSERCLTLVFEFME-KDLKKVLDENK------ 113

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     +  +  + Q++  + + ++ +  ++H DLKP
Sbjct: 114 -----TGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKP 147

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 16/96 (16%)

Query: 20  REYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +E    K  + HP +VKL++VF  D      V+E  +G +L   +K+ K  +E E     
Sbjct: 54  KEITALKLCEGHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIKKKKHFSETE----- 107

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A  I+ ++VSA+ +++++   V+H DLKP
Sbjct: 108 -------ASYIMRKLVSAVSHMHDVG--VVHRDLKP 134

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 17  HALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              RE  +      H  V++L + FE + + F  V E   G  +  ++ + +   E E  
Sbjct: 56  RVFREVEMLYQCQGHRNVLELIEFFE-EEDRFYLVFEKMRGGSILSHIHKRRHFNELE-- 112

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     A  +V  V SAL +L+     + H DLKP
Sbjct: 113 ----------ASVVVQDVASALDFLHNKG--IAHRDLKP 139

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 62.7 bits (153), Expect = 5e-13
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           L+E +I + +  HP +++L D +E     F  V +     +L  YL +  T++E+E    
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEKE---- 125

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    R I+  ++  +  L+++   ++H DLKP
Sbjct: 126 --------TRKIMRALLEVICALHKLN--IVHRDLKP 152

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 62.7 bits (153), Expect = 6e-13
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 18/98 (18%)

Query: 20  REYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGH-DLDFYLKQHKTIAEREARC 76
            E  + K +      V++L D FE   +SF  +LE  +   DL  ++ +   + E  AR 
Sbjct: 95  MEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGALQEELARS 153

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                          QV+ A+++ +     V+H D+K 
Sbjct: 154 FFW------------QVLEAVRHCHNCG--VLHRDIKD 177

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 62.2 bits (152), Expect = 6e-13
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  ALRE  + K L H  +V+L+DV          V E+CD  DL  Y           
Sbjct: 44  VPSSALREICLLKELKHKNIVRLHDVL-HSDKKLTLVFEFCD-QDLKKYFDSCN------ 95

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        +S + Q++  L + +     V+H DLKP
Sbjct: 96  -----GDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKP 129

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 62.3 bits (152), Expect = 7e-13
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 16/96 (16%)

Query: 20  REYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            E  I  +   HP ++ L DV++ D      V E   G +L   + + K  +ERE     
Sbjct: 64  EEIEILLRYGQHPNIITLKDVYD-DGKYVYVVTELMKGGELLDKILRQKFFSERE----- 117

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                  A +++  +   ++YL+     V+H DLKP
Sbjct: 118 -------ASAVLFTITKTVEYLHAQG--VVHRDLKP 144

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 62.2 bits (152), Expect = 8e-13
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             R ALRE  + + L HP ++ L D F    ++   V ++ +  DL+  +K +       
Sbjct: 55  INRTALREIKLLQELSHPNIIGLLDAFGHK-SNISLVFDFME-TDLEVIIKDN------- 105

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               S     +  ++ ++  +  L+YL++    ++H DLKP
Sbjct: 106 ----SLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKP 140

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 62.2 bits (152), Expect = 8e-13
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 16/102 (15%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  A+RE ++ K L+HP +VKL DV     N    V E+    DL  ++          
Sbjct: 45  VPSTAIREISLLKELNHPNIVKLLDVI-HTENKLYLVFEFLH-QDLKKFMDASA------ 96

Query: 74  ARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                   +     +S + Q++  L + +  +  V+H DLKP
Sbjct: 97  -----LTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKP 131

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 62.5 bits (152), Expect = 8e-13
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIAER 72
               A RE  + + L HP V+ L  VF   A      + +Y + HDL   +K H+     
Sbjct: 61  ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHR---AS 116

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +A            +S++ Q++  + YL+     V+H DLKP
Sbjct: 117 KANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKP 156

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 61.8 bits (151), Expect = 9e-13
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
            E  + K + H  +V L D++E     +  V++   G +L   + +     E++      
Sbjct: 55  NEIAVLKKIKHENIVTLEDIYE-STTHYYLVMQLVSGGELFDRILERGVYTEKD------ 107

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 A  ++ QV+SA+KYL+E    ++H DLKP
Sbjct: 108 ------ASLVIQQVLSAVKYLHENG--IVHRDLKP 134

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 62.0 bits (151), Expect = 1e-12
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE   H++L HP +V+  +V          ++EY  G +L   +      +E EAR   Q
Sbjct: 65  REIINHRSLRHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ 123

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++S + Y + ++  + H DLK 
Sbjct: 124 ------------QLLSGVSYCHSMQ--ICHRDLKL 144

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  I+K L+H  VVK Y     + N     LEYC G +L   ++    + E +A+    
Sbjct: 54  KEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q+++ + YL+ I   + H D+KP
Sbjct: 113 ------------QLMAGVVYLHGIG--ITHRDIKP 133

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 20/100 (20%)

Query: 20  REYNIHKALD----HPRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIAEREA 74
            E  +   +     HP V++L D FE     F  VLE      DL  Y+ +   + E  +
Sbjct: 83  LEVALLWKVGAGGGHPGVIRLLDWFE-TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS 141

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           RC               QVV+A+++ +     V+H D+K 
Sbjct: 142 RCFFG------------QVVAAIQHCHSRG--VVHRDIKD 167

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  I+K L+H  VVK Y     + N     LEYC G +L   ++    + E +A+    
Sbjct: 54  KEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q+++ + YL+ I   + H D+KP
Sbjct: 113 ------------QLMAGVVYLHGIG--ITHRDIKP 133

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 61.3 bits (149), Expect = 2e-12
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 15/95 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE    K   HP ++KLY V    ++ F  V+EY  G +L  Y+ ++  + E+E+R L Q
Sbjct: 65  REIQNLKLFRHPHIIKLYQVISTPSDIFM-VMEYVSGGELFDYICKNGRLDEKESRRLFQ 123

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++S + Y +     V+H DLKP
Sbjct: 124 ------------QILSGVDYCHRHM--VVHRDLKP 144

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
            E  + K L HP +V+ YD +E           V E      L  YLK+ K +  +    
Sbjct: 74  EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIK---- 129

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLK 113
                     RS   Q++  L++L+   PP+IH DLK
Sbjct: 130 --------VLRSWCRQILKGLQFLHTRTPPIIHRDLK 158

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 60.7 bits (148), Expect = 3e-12
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
            P  A+RE ++ K L H  +V L+D+   +  S   V EY D  DL  YL          
Sbjct: 43  APCTAIREVSLLKDLKHANIVTLHDIIHTE-KSLTLVFEYLD-KDLKQYLDDCG------ 94

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      + +  + Q++  L Y +  K  V+H DLKP
Sbjct: 95  -----NIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKP 128

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 60.0 bits (146), Expect = 5e-12
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 20/101 (19%)

Query: 20  REYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL--DFYLKQHKTIAERE 73
           RE  +H      P +V++ DV+E           V+E  DG +L      +  +   ERE
Sbjct: 59  REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 118

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       A  I+  +  A++YL+ I   + H D+KP
Sbjct: 119 ------------ASEIMKSIGEAIQYLHSIN--IAHRDVKP 145

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 59.5 bits (145), Expect = 7e-12
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + ALRE  + K L HP +V L +VF         V EYCD H +   L +++      
Sbjct: 45  IKKIALREIRMLKQLKHPNLVNLLEVFRRK-RRLHLVFEYCD-HTVLHELDRYQ------ 96

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                +       +SI  Q + A+ + ++     IH D+KP
Sbjct: 97  -----RGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKP 130

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 59.7 bits (145), Expect = 8e-12
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 20/101 (19%)

Query: 20  REYNIHKAL-DHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL--DFYLKQHKTIAERE 73
           RE  +H      P +V++ DV+E           V+E  DG +L      +  +   ERE
Sbjct: 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 162

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       A  I+  +  A++YL+ I   + H D+KP
Sbjct: 163 ------------ASEIMKSIGEAIQYLHSIN--IAHRDVKP 189

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 16/95 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           RE +  K L HP ++KLYDV     +    V+EY  G   D Y+ + K + E E R   Q
Sbjct: 58  REISYLKLLRHPHIIKLYDVITTPTDIVM-VIEYAGGELFD-YIVEKKRMTEDEGRRFFQ 115

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       Q++ A++Y +  K  ++H DLKP
Sbjct: 116 ------------QIICAIEYCHRHK--IVHRDLKP 136

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 15/116 (12%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 59
           +  K +  + N    +  L + ++  K+ D P +V+ +  F  +       +E       
Sbjct: 53  IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-TDVFIAMELMGTCAE 111

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
               +    I E          L      + + +V AL YL E K  VIH D+KP 
Sbjct: 112 KLKKRMQGPIPE--------RILGK----MTVAIVKALYYLKE-KHGVIHRDVKPS 154

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 20/101 (19%)

Query: 20  REYNIH-KALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDL--DFYLKQHKTIAERE 73
           +E + H +A   P +V + DV+E           ++E  +G +L      +  +   ERE
Sbjct: 70  QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTERE 129

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       A  I+  + +A+++L+     + H D+KP
Sbjct: 130 ------------AAEIMRDIGTAIQFLHSHN--IAHRDVKP 156

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 14  FPRHALREYNIHKAL---DHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
            P   +RE  + + L   +HP VV+L DV              V E+ D  DL  YL + 
Sbjct: 54  LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKA 112

Query: 67  KTIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        P L     + ++ Q +  L +L+     ++H DLKP
Sbjct: 113 P-----------PPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKP 148

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             + A+RE  + K L H  +V L +V +     +  V E+ D H +   L+         
Sbjct: 67  VKKIAMREIKLLKQLRHENLVNLLEVCKKK-KRWYLVFEFVD-HTILDDLELFP------ 118

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        +  + Q+++ + + +     +IH D+KP
Sbjct: 119 -----NGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKP 152

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 21/106 (19%)

Query: 13  PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG---HDLDFYLKQHKTI 69
                 + E      L  PR+V LY     +       +E  +G     L   +KQ   +
Sbjct: 92  RLEVFRVEELVACAGLSSPRIVPLYG-AVREGPWVNIFMELLEGGSLGQL---IKQMGCL 147

Query: 70  AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            E              A   + Q +  L+YL+  +  ++H D+K  
Sbjct: 148 PEDR------------ALYYLGQALEGLEYLHTRR--ILHGDVKAD 179

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 56.9 bits (137), Expect = 6e-11
 Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 10/96 (10%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            +     K       +K Y       N    V E      L   +  +K   E   + + 
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAHL-FQNGSVLVGELYSYGTLLNAINLYKNTPE---KVMP 170

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           Q        S  M+++  ++ +++ +  +IH D+KP
Sbjct: 171 Q----GLVISFAMRMLYMIEQVHDCE--IIHGDIKP 200

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 56.4 bits (137), Expect = 8e-11
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 22/109 (20%)

Query: 14  FPRHALREYNIHKAL---DHPRVVKLYDVF----EIDANSFCTVLEYCDGHDLDFYLKQH 66
            P   +RE  + + L   +HP VV+L+DV              V E+ D  DL  YL + 
Sbjct: 54  MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKV 112

Query: 67  KTIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       +P + T   + ++ Q++  L +L+  +  V+H DLKP
Sbjct: 113 P-----------EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKP 148

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 56.5 bits (137), Expect = 8e-11
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 21/108 (19%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDV-------FEIDANSFCTVLEYCDGHDLDFYLKQH 66
           FP  ALRE  I + L H  VV L ++       +     S   V ++C+ HDL       
Sbjct: 59  FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDL------- 110

Query: 67  KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             +        +   +    + ++  +++ L Y++  K  ++H D+K 
Sbjct: 111 AGLLSNVLVKFTLSEI----KRVMQMLLNGLYYIHRNK--ILHRDMKA 152

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 56.4 bits (136), Expect = 9e-11
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           KL+   +        +RE  +    + P +V  Y  F  D       +E+ DG  LD  L
Sbjct: 64  KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGSLDQVL 122

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           K+   I E          L      + + V+  L YL E    ++H D+KP 
Sbjct: 123 KKAGRIPE--------QILGK----VSIAVIKGLTYLREKH-KIMHRDVKPS 161

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 59
           M  K + + ++    +  L + ++  ++ D P +V+ Y             +E       
Sbjct: 50  MAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-FREGDCWICMELMSTSFD 108

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYL-NEIKPPVIHYDLKPG 115
            FY    K +       + +  L      I +  V AL +L   +K  +IH D+KP 
Sbjct: 109 KFY----KYVYSVLDDVIPEEILGK----ITLATVKALNHLKENLK--IIHRDIKPS 155

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           +  RE ++   LDHP  VKLY  F+ D       L Y    +L  Y+++  +  E   R 
Sbjct: 76  YVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF 134

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        ++VSAL+YL+     +IH DLKP
Sbjct: 135 ----YTA--------EIVSALEYLHGKG--IIHRDLKP 158

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 11/96 (11%)

Query: 20  REYNIHKALDHPRVVKLY-DVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            E    +   HP V+ +        A     +  +     L   L +       +++ + 
Sbjct: 56  EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVK 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                       + +   + +L+ ++P +  + L  
Sbjct: 116 ----------FALDMARGMAFLHTLEPLIPRHALNS 141

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 18/99 (18%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANS-FCTVLEYCDG--HDLDFYLKQHKTIAEREARC 76
           +E  + + L H  V++L DV   +       V+EYC     ++   + + +     +A  
Sbjct: 55  KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-FPVCQAHG 113

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                          Q++  L+YL+     ++H D+KPG
Sbjct: 114 YFC------------QLIDGLEYLHSQG--IVHKDIKPG 138

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 53.9 bits (130), Expect = 6e-10
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAEREARCL 77
            RE  I   L+HP +VKLY +     N    V+E+    DL   L  +   I        
Sbjct: 71  QREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL-- 125

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      +++ +   ++Y+    PP++H DL+ 
Sbjct: 126 ----------RLMLDIALGIEYMQNQNPPIVHRDLRS 152

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 53.7 bits (129), Expect = 8e-10
 Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 12/95 (12%)

Query: 21  EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP 80
           +            V                ++ C   +L  ++ +  ++ +RE       
Sbjct: 111 KIRRMDPFSTKNTVGQLQPSSPK-VYLYIQMQLCRKENLKDWMNRRCSLEDREHG----- 164

Query: 81  YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                   I +Q+  A+++L+     ++H DLKP 
Sbjct: 165 ----VCLHIFIQIAEAVEFLHSKG--LMHRDLKPS 193

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 53.4 bits (129), Expect = 8e-10
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 1   MCAKLLTTNLNLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL 59
           M  K +   +N    +  L + +I  + +D P  V  Y             +E  D    
Sbjct: 35  MAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-FREGDVWICMELMDTSLD 93

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            FY +        + + + +  L      I + +V AL++L+  K  VIH D+KP 
Sbjct: 94  KFYKQVID-----KGQTIPEDILGK----IAVSIVKALEHLHS-KLSVIHRDVKPS 139

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 53.1 bits (128), Expect = 1e-09
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E      ++HP +VKLY       N  C V+EY +G  L   L   +           
Sbjct: 49  IVELRQLSRVNHPNIVKLYGAC---LNPVCLVMEYAEGGSLYNVLHGAE----------P 95

Query: 79  QPYLSTSAR-SIVMQVVSALKYLNEIKP-PVIHYDLKP 114
            PY + +   S  +Q    + YL+ ++P  +IH DLKP
Sbjct: 96  LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            RE  +   L H  +V+ + V   +      V EY    DL+ +L+ H   A+  A    
Sbjct: 91  QREAELLTMLQHQHIVRFFGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149

Query: 79  QPYLSTSAR---SIVMQVVSALKYLNEIKPPVIHYDL 112
                       ++  QV + + YL  +    +H DL
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDL 184

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 10/96 (10%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  I K L HP +V           +   V EY     L   L +     + + R   
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR- 139

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    S+   V   + YL+   PP++H +LK 
Sbjct: 140 --------LSMAYDVAKGMNYLHNRNPPIVHRNLKS 167

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 15/89 (16%)

Query: 27  ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSA 86
            L H  +V + DV E D   +  V+EY +G  L  Y++ H  ++               A
Sbjct: 67  QLSHQNIVSMIDVDEEDDCYY-LVMEYIEGPTLSEYIESHGPLSVDT------------A 113

Query: 87  RSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            +   Q++  +K+ ++++  ++H D+KP 
Sbjct: 114 INFTNQILDGIKHAHDMR--IVHRDIKPQ 140

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 52.6 bits (126), Expect = 3e-09
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 20/116 (17%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCT----VLEYCDGHDL 59
           K L  + +      A+ E      + HP +V++++  E            V+EY  G  L
Sbjct: 112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                Q   +AE              A + +++++ AL YL+ I   +++ DLKP 
Sbjct: 172 KRSKGQKLPVAE--------------AIAYLLEILPALSYLHSI--GLVYNDLKPE 211

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 51.9 bits (125), Expect = 3e-09
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 15/89 (16%)

Query: 27  ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSA 86
            L  P VV ++D  EID   +   +   +G DL   L++   +A               A
Sbjct: 90  RLQEPHVVPIHDFGEIDGQLY-VDMRLINGVDLAAMLRRQGPLAPPR------------A 136

Query: 87  RSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            +IV Q+ SAL   +       H D+KP 
Sbjct: 137 VAIVRQIGSALDAAHAAG--ATHRDVKPE 163

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 17/92 (18%)

Query: 27  ALDHPRVVKLYDVFEIDANSFCT---VLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLS 83
           AL+HP +V +YD  E +  +      V+EY DG  L   +     +  +           
Sbjct: 68  ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR---------- 117

Query: 84  TSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             A  ++     AL + ++    +IH D+KP 
Sbjct: 118 --AIEVIADACQALNFSHQNG--IIHRDVKPA 145

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 51.1 bits (123), Expect = 5e-09
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E    +  DHP +VKL  V  I  N    ++E C   +L  +L+  K         L 
Sbjct: 64  LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK-------YSLD 114

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L         Q+ +AL YL   +   +H D+
Sbjct: 115 LASLI----LYAYQLSTALAYLESKR--FVHRDI 142

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 51.1 bits (123), Expect = 7e-09
 Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  I K   HP +V+L  V          V+E   G D   +L+            L 
Sbjct: 160 LQEARILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEG-------ARLR 211

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      +V    + ++YL       IH DL
Sbjct: 212 VKTL----LQMVGDAAAGMEYLESKC--CIHRDL 239

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 50.7 bits (122), Expect = 9e-09
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 15/97 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            +E  +   L HP ++ L  V  +   + C V+E+  G  L+  L   +   +       
Sbjct: 54  RQEAKLFAMLKHPNIIALRGVC-LKEPNLCLVMEFARGGPLNRVLSGKRIPPDI------ 106

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKP-PVIHYDLKP 114
                    +  +Q+   + YL++    P+IH DLK 
Sbjct: 107 -------LVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 50.7 bits (122), Expect = 9e-09
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            RE  +   L H  +VK Y V   D +    V EY    DL+ +L+ H   A        
Sbjct: 65  QREAELLTNLQHEHIVKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123

Query: 79  QPYLSTSAR----SIVMQVVSALKYLNEIKPPVIHYDL 112
           +             I  Q+ S + YL       +H DL
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDL 159

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 12/94 (12%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E ++   L H  +V+L  V   +      V EY     L  YL+            L 
Sbjct: 62  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR------GRSVLG 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L        + V  A++YL       +H DL
Sbjct: 116 GDCLL----KFSLDVCEAMEYLEGNN--FVHRDL 143

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H L E  I +A++ P +VKL   F+ D ++   V+EY  G ++  +L++    +E  AR 
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        Q+V   +YL+ +   +I+ DLKP
Sbjct: 146 ----YAA--------QIVLTFEYLHSLD--LIYRDLKP 169

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  I K LDHP +VKL  +  I+      ++E     +L  YL+++K         L 
Sbjct: 61  MSEAVIMKNLDHPHIVKLIGI--IEEEPTWIIMELYPYGELGHYLERNK-------NSLK 111

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L        +Q+  A+ YL  I    +H D+
Sbjct: 112 VLTLV----LYSLQICKAMAYLESIN--CVHRDI 139

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
             E  +   L HP VV L  V          +  YC   DL  +L      ++  +    
Sbjct: 60  RHEAMLRARLQHPNVVCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118

Query: 79  QPYLSTSAR----SIVMQVVSALKYLNEIKPPVIHYDL 112
           +   S         +V Q+ + ++YL+     V+H DL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDL 154

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           R+  +E  I + L+HP +V L+  F+ D      V++   G DL ++L+Q+    E   +
Sbjct: 60  RNVFKELQIMQGLEHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVK 118

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                ++         ++V AL YL   +  +IH D+KP
Sbjct: 119 L----FIC--------ELVMALDYLQNQR--IIHRDMKP 143

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E ++ K  +   VV+L  V          ++E     DL  YL+  +         + 
Sbjct: 76  LNEASVMKEFNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLR--PAMANNPVL 132

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
            P   +    +  ++   + YLN  K   +H DL
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDL 164

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 16/94 (17%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E N+ + LD+P +V++  +   +A S+  V+E  +   L+ YL+Q++         + 
Sbjct: 66  LAEANVMQQLDNPYIVRMIGI--CEAESWMLVMEMAELGPLNKYLQQNRH--------VK 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              +         QV   +KYL E     +H DL
Sbjct: 116 DKNIIELVH----QVSMGMKYLEESN--FVHRDL 143

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E    +  DHP +VKL  V  I  N    ++E C   +L  +L+  K         L 
Sbjct: 439 LQEALTMRQFDHPHIVKLIGV--ITENPVWIIMELCTLGELRSFLQVRK-------FSLD 489

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L         Q+ +AL YL   +   +H D+
Sbjct: 490 LASLI----LYAYQLSTALAYLESKR--FVHRDI 517

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 14/96 (14%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREARCLS 78
            E  +HK L H  +V+       +       +E   G  L      +   + + E     
Sbjct: 68  EEIALHKHLKHKNIVQYLG-SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE----- 121

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 +      Q++  LKYL++ +  ++H D+K 
Sbjct: 122 -----QTIGFYTKQILEGLKYLHDNQ--IVHRDIKG 150

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
               ++   L H  +V  Y V  +  +    V E+     LD YLK++K        C++
Sbjct: 60  FEAASMMSKLSHKHLVLNYGVC-VCGDENILVQEFVKFGSLDTYLKKNK-------NCIN 111

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
             +       +  Q+ +A+ +L E    +IH ++
Sbjct: 112 ILWKL----EVAKQLAAAMHFLEENT--LIHGNV 139

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 13/98 (13%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
            AL E  I + ++   VV L   +E   ++ C VL   +G DL F++         EAR 
Sbjct: 230 MALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR- 287

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    A     ++   L+ L+  +  +++ DLKP
Sbjct: 288 ---------AVFYAAEICCGLEDLHRER--IVYRDLKP 314

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 12/94 (12%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E ++   L H  +V+L  V   +      V EY     L  YL+       R    L 
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR------SRGRSVLG 287

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L        + V  A++YL       +H DL
Sbjct: 288 GDCL----LKFSLDVCEAMEYLEGNN--FVHRDL 315

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +RE  I   LD+P +V+L  V    A +   V+E   G  L  +L   +         + 
Sbjct: 58  MREAQIMHQLDNPYIVRLIGV--CQAEALMLVMEMAGGGPLHKFLVGKR-------EEIP 108

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              ++        QV   +KYL E     +H DL
Sbjct: 109 VSNVAELLH----QVSMGMKYLEEKN--FVHRDL 136

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 49.5 bits (118), Expect = 3e-08
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 16  RHALREYNI---HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
             AL E  +       D P +V +   F    +    +L+  +G DL ++L QH   +E 
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           + R     Y +        +++  L++++     V++ DLKP
Sbjct: 293 DMRF----YAA--------EIILGLEHMHNRF--VVYRDLKP 320

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 17/101 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDV-----FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           LRE    K  DHP V KL  V      +        +L +    DL  +L          
Sbjct: 73  LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--------LA 124

Query: 74  ARCLSQPYLSTSARSIVM--QVVSALKYLNEIKPPVIHYDL 112
           +R    P+       +     +   ++YL+      IH DL
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDL 163

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E N+ K L H ++VKL+ V  +       + E+     L  +LK        E     
Sbjct: 231 LAEANVMKTLQHDKLVKLHAV--VTKEPIYIITEFMAKGSLLDFLK------SDEGSKQP 282

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
            P L         Q+   + ++ +     IH DL
Sbjct: 283 LPKL----IDFSAQIAEGMAFIEQRN--YIHRDL 310

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 27/101 (26%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAE 71
           L+E  + K + HP +V+L  V        CT       + E+    +L  YL++      
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGV--------CTREPPFYIITEFMTYGNLLDYLREC----- 103

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              + +S   L      +  Q+ SA++YL +     IH DL
Sbjct: 104 -NRQEVSAVVLL----YMATQISSAMEYLEKKN--FIHRDL 137

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 12/98 (12%)

Query: 19  LREYNIHKALDHPRVVKLYDV----FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           L E    K   HP V++L  V              +L +    DL  YL   +   E   
Sbjct: 84  LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL--ETGP 141

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
           + +    L       ++ +   ++YL+      +H DL
Sbjct: 142 KHIPLQTLL----KFMVDIALGMEYLSNRN--FLHRDL 173

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 26/100 (26%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHKTIAER 72
           L E N+ K L H R+V+LY V         T      + EY +   L  +LK        
Sbjct: 56  LAEANLMKQLQHQRLVRLYAV--------VTQEPIYIITEYMENGSLVDFLK------TP 101

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L+   L      +  Q+   + ++ E     IH DL
Sbjct: 102 SGIKLTINKLL----DMAAQIAEGMAFIEERN--YIHRDL 135

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 48.4 bits (116), Expect = 6e-08
 Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 27/100 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHKTIAER 72
           L E  +  ++D+P V +L  +        C       + +      L  Y+++HK     
Sbjct: 65  LDEAYVMASVDNPHVCRLLGI--------CLTSTVQLITQLMPFGCLLDYVREHK----- 111

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               +   YL     +  +Q+   + YL + +  ++H DL
Sbjct: 112 --DNIGSQYL----LNWCVQIAKGMNYLEDRR--LVHRDL 143

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 48.2 bits (115), Expect = 7e-08
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  + K L H ++V+LY V  +       V EY     L  +LK          + L 
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGE------TGKYLR 278

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
            P L      +  Q+ S + Y+  +    +H DL
Sbjct: 279 LPQLV----DMAAQIASGMAYVERMN--YVHRDL 306

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 16/95 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            +E +I + L H  ++K      +  A S   V+EY     L  YL +H          +
Sbjct: 81  KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---------I 131

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L         Q+   + YL+      IH DL
Sbjct: 132 GLAQL----LLFAQQICEGMAYLHAQH--YIHRDL 160

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            RE  I K+L H  +VK   V +     +   ++EY     L  YL++HK         +
Sbjct: 59  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-------ERI 111

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L         Q+   ++YL   +   IH DL
Sbjct: 112 DHIKL----LQYTSQICKGMEYLGTKR--YIHRDL 140

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 28/101 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAE 71
           L E +I    DHP +++L  V         T       V EY +   LD +L++H     
Sbjct: 94  LGEASIMGQFDHPNIIRLEGV--------VTKSKPVMIVTEYMENGSLDSFLRKHD---- 141

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
                 +   L    R     + S +KYL+++    +H DL
Sbjct: 142 ---AQFTVIQLVGMLR----GIASGMKYLSDMG--YVHRDL 173

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 17/112 (15%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ----- 65
           +    +HALRE  I + LDH  +VK++++     +     +      +   Y+ Q     
Sbjct: 48  DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN-SVYIVQEYMET 106

Query: 66  --HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                +          P L   AR  + Q++  LKY++     V+H DLKP 
Sbjct: 107 DLANVLE-------QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPA 149

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 28/101 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAE 71
            +E      L HP++VK Y V        C+       V EY     L  YL+ H     
Sbjct: 51  FQEAQTMMKLSHPKLVKFYGV--------CSKEYPIYIVTEYISNGCLLNYLRSHG---- 98

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              + L    L          V   + +L   +   IH DL
Sbjct: 99  ---KGLEPSQLLEMCY----DVCEGMAFLESHQ--FIHRDL 130

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 48.1 bits (115), Expect = 8e-08
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 14/95 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            +E  I + L H  +VK   +  E   N    ++E+     L  YL ++K         +
Sbjct: 71  KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-------NKI 123

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
           +            +Q+   + YL   +   +H DL
Sbjct: 124 NLKQQL----KYAVQICKGMDYLGSRQ--YVHRDL 152

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 48.0 bits (115), Expect = 8e-08
 Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 13/94 (13%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  I K   HP V+ L  +      S   VL Y    DL  +++             +
Sbjct: 74  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-------HNPT 126

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L        +QV   +KYL   K   +H DL
Sbjct: 127 VKDLI----GFGLQVAKGMKYLASKK--FVHRDL 154

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 48.1 bits (115), Expect = 8e-08
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  I    +H  +V+   V  + +     ++E   G DL  +L++ +     +   L+
Sbjct: 81  LMEALIISKFNHQNIVRCIGVS-LQSLPRFILMELMAGGDLKSFLRETRPRPS-QPSSLA 138

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      +   +    +YL E     IH D+
Sbjct: 139 MLDLL----HVARDIACGCQYLEENH--FIHRDI 166

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 48.1 bits (115), Expect = 9e-08
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 28/101 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAE 71
           L E  I     H  +++L  V         +       + EY +   LD +L++      
Sbjct: 94  LGEAGIMGQFSHHNIIRLEGV--------ISKYKPMMIITEYMENGALDKFLREKD---- 141

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
                 S   L    R     + + +KYL  +    +H DL
Sbjct: 142 ---GEFSVLQLVGMLR----GIAAGMKYLANMN--YVHRDL 173

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 47.8 bits (114), Expect = 9e-08
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  I    +H  +V+   V  + +     +LE   G DL  +L++ +    + +  L+
Sbjct: 122 LMEALIISKFNHQNIVRCIGVS-LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS-LA 179

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      +   +    +YL E     IH D+
Sbjct: 180 MLDLL----HVARDIACGCQYLEENH--FIHRDI 207

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 47.7 bits (114), Expect = 9e-08
 Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            RE  +    D+P +VKL  V        C + EY    DL+ +L+              
Sbjct: 98  QREAALMAEFDNPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156

Query: 79  QPYLSTSAR------------SIVMQVVSALKYLNEIKPPVIHYDL 112
               +  +              I  QV + + YL+E K   +H DL
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDL 200

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H   E  +   + HP +++++  F+ DA     +++Y +G +L   L++ +      A+ 
Sbjct: 52  HTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF 110

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        +V  AL+YL+     +I+ DLKP
Sbjct: 111 ----YAA--------EVCLALEYLHSKD--IIYRDLKP 134

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            RE  I K+L H  +VK   V +     +   ++EY     L  YL++HK         +
Sbjct: 90  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-------ERI 142

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L         Q+   ++YL   +   IH DL
Sbjct: 143 DHIKL----LQYTSQICKGMEYLGTKR--YIHRDL 171

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 28/101 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIAE 71
           L E +I    DHP +++L  V         T       V EY +   LD +L+ H     
Sbjct: 98  LSEASIMGQFDHPNIIRLEGV--------VTRGRLAMIVTEYMENGSLDTFLRTHD---- 145

Query: 72  REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
                 +   L    R     V + ++YL+++    +H DL
Sbjct: 146 ---GQFTIMQLVGMLR----GVGAGMRYLSDLG--YVHRDL 177

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  + K L H ++V+LY V  +       V EY     L  +LK          + L 
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGE------TGKYLR 361

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
            P L      +  Q+ S + Y+  +    +H DL
Sbjct: 362 LPQLV----DMAAQIASGMAYVERMN--YVHRDL 389

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 14/99 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
            H L E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +  +E  AR
Sbjct: 193 AHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRAR 251

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y +        ++VSAL YL+  K  V++ DLK 
Sbjct: 252 F----YGA--------EIVSALDYLHSEK-NVVYRDLKL 277

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  +   L H ++V+LY V          + EY     L  YL++ +           
Sbjct: 67  IEEAKVMMNLSHEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMR-------HRFQ 118

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      +   V  A++YL   +   +H DL
Sbjct: 119 TQQLL----EMCKDVCEAMEYLESKQ--FLHRDL 146

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 13/94 (13%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           LRE  + + L+HP V+ L  +          +L Y    DL  +++  +       R  +
Sbjct: 70  LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-------RNPT 122

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L     S  +QV   ++YL E K   +H DL
Sbjct: 123 VKDLI----SFGLQVARGMEYLAEQK--FVHRDL 150

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +RE  I   LD+P +V+L  V    A +   V+E   G  L  +L   +         + 
Sbjct: 384 MREAQIMHQLDNPYIVRLIGV--CQAEALMLVMEMAGGGPLHKFLVGKR-------EEIP 434

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              ++        QV   +KYL E     +H +L
Sbjct: 435 VSNVAELLH----QVSMGMKYLEEKN--FVHRNL 462

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 16/98 (16%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
               E +I    + P VV+L+  F+ D      V+EY  G DL   L  +  + E+ AR 
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARF 172

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        +VV AL  ++ +    IH D+KP
Sbjct: 173 ----YTA--------EVVLALDAIHSMG--FIHRDVKP 196

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  +   L HP++V+LY V  ++    C V E+ +   L  YL+  +          +
Sbjct: 51  IEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQR-------GLFA 102

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      + + V   + YL E    VIH DL
Sbjct: 103 AETLL----GMCLDVCEGMAYLEEAC--VIHRDL 130

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E+N+ K ++HP V+KLY            ++EY     L  +L++ + +         
Sbjct: 74  LSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132

Query: 79  QPYLSTSAR------------SIVMQVVSALKYLNEIKPPVIHYDL 112
               S+               S   Q+   ++YL E+K  ++H DL
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDL 176

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 13/94 (13%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L E  I K   HP V+ L  +      S   VL Y    DL  +++             +
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-------HNPT 190

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L        +QV   +K+L   K   +H DL
Sbjct: 191 VKDLI----GFGLQVAKGMKFLASKK--FVHRDL 218

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 21/110 (19%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCT---VLEYCDGHDLDFYLKQH 66
           +L   +  LRE  I   L+H  VVK+ D+    D   F     VLE  D  D        
Sbjct: 92  DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDF------K 144

Query: 67  KTIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           K          +  YL+    ++++  ++  +KY++     ++H DLKP 
Sbjct: 145 KLFR-------TPVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPA 185

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  + K + HP +V+L  V       F  + E+    +L  YL+      E   + +S
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLR------ECNRQEVS 316

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              L      +  Q+ SA++YL +     IH +L
Sbjct: 317 AVVLL----YMATQISSAMEYLEKKN--FIHRNL 344

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 27/100 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHKTIAER 72
                   +LDH  +V+L  +        C       V +Y     L  +++QH+     
Sbjct: 63  TDHMLAIGSLDHAHIVRLLGL--------CPGSSLQLVTQYLPLGSLLDHVRQHR----- 109

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L    L     +  +Q+   + YL E    ++H +L
Sbjct: 110 --GALGPQLL----LNWGVQIAKGMYYLEEHG--MVHRNL 141

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 14/98 (14%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
               E ++    D   + +L+  F+ D N    V+EY  G DL   L        +    
Sbjct: 107 CFREERDVLVNGDRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLS-------KFGER 158

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +        AR  + ++V A+  ++ +    +H D+KP
Sbjct: 159 IPAE----MARFYLAEIVMAIDSVHRLG--YVHRDIKP 190

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 16/108 (14%)

Query: 12  LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCT-----VLEYCDGHDLDFYLKQH 66
           L   R   RE  I + LDH  +V+L   F              VL+Y     +      +
Sbjct: 88  LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETV------Y 140

Query: 67  KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +    R      Q       +  + Q+  +L Y++     + H D+KP
Sbjct: 141 RVA--RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKP 184

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 7/99 (7%)

Query: 19  LREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + E  I   +  H  VV L             ++E+C   +L  YL+  +          
Sbjct: 78  MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137

Query: 78  SQPYLS--TSARSIVM--QVVSALKYLNEIKPPVIHYDL 112
              Y    T    I    QV   +++L   K   IH DL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDL 174

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 14/97 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  I    DHP +VKL   +  D      ++E+C G  +D  + +         R L+
Sbjct: 64  IVEIEILATCDHPYIVKLLGAYYHD-GKLWIMIEFCPGGAVDAIMLELD-------RGLT 115

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +P +      +  Q++ AL +L+  +  +IH DLK G
Sbjct: 116 EPQIQV----VCRQMLEALNFLHSKR--IIHRDLKAG 146

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E        HP +V  Y  F +  +    V++   G  +   +K      E ++  L 
Sbjct: 61  LKEIQAMSQCHHPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +  ++T    I+ +V+  L+YL++     IH D+K G
Sbjct: 120 ESTIAT----ILREVLEGLEYLHKNG--QIHRDVKAG 150

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H   E NI + + HP +V L   F+        +LEY  G +L   L++     E  A  
Sbjct: 67  HTKAERNILEEVKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMQLEREGIFMEDTACF 125

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               YL+        ++  AL +L++    +I+ DLKP
Sbjct: 126 ----YLA--------EISMALGHLHQKG--IIYRDLKP 149

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 27/100 (27%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQHKTIAER 72
           L E  +  ++D+P V +L  +        C       + +      L  Y+++HK     
Sbjct: 65  LDEAYVMASVDNPHVCRLLGI--------CLTSTVQLITQLMPFGCLLDYVREHK----- 111

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               +   YL         Q+   + YL + +  ++H DL
Sbjct: 112 --DNIGSQYLLNWCV----QIAKGMNYLEDRR--LVHRDL 143

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 14/95 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDV-FEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
            RE  I KAL    +VK   V +     S   V+EY     L  +L++H+         L
Sbjct: 72  QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-------ARL 124

Query: 78  SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
               L         Q+   ++YL   +   +H DL
Sbjct: 125 DASRL----LLYSSQICKGMEYLGSRR--CVHRDL 153

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 45.5 bits (108), Expect = 6e-07
 Identities = 17/114 (14%), Positives = 27/114 (23%), Gaps = 19/114 (16%)

Query: 4   KLLTTNLNLP--FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDF 61
             +     LP    +  L        +D P V ++ DV    A     V E+  G  L  
Sbjct: 62  TFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV-VAEWIRGGSL-- 118

Query: 62  YLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                                   A   +  + +A    +     V      P 
Sbjct: 119 ------------QEVADTSPSPVGAIRAMQSLAAAADAAHRA--GVALSIDHPS 158

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           +RE N   +LDH  +++LY V  +       V E      L   L++H+           
Sbjct: 69  IREVNAMHSLDHRNLIRLYGV--VLTPPMKMVTELAPLGSLLDRLRKHQ-------GHFL 119

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDL 112
              LS       +QV   + YL   +   IH DL
Sbjct: 120 LGTLS----RYAVQVAEGMGYLESKR--FIHRDL 147

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 45.0 bits (107), Expect = 8e-07
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 14/96 (14%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
            RE   ++   H  VV       +       +   C G  L   ++  K + +       
Sbjct: 77  KREVMAYRQTRHENVVLFMGAC-MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT--- 132

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                   R I  ++V  + YL+     ++H DLK 
Sbjct: 133 --------RQIAQEIVKGMGYLH--AKGILHKDLKS 158

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 20/104 (19%)

Query: 19  LREYNIHKALD-HPRVVKLYDVFEIDANSFCT-------VLEYCDGHDLDFYLKQHKTIA 70
           + E  I   L  H  +V L           CT       + EYC   DL  +L++   + 
Sbjct: 97  MSELKIMSHLGQHENIVNLLGA--------CTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148

Query: 71  EREARCLSQPYLSTSARSIVM--QVVSALKYLNEIKPPVIHYDL 112
           E +         +++   +    QV   + +L       IH D+
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDV 190

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 45.2 bits (107), Expect = 9e-07
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 15/100 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--EA 74
            A+ E  I   +    +V L   FE      C V+   +G D+ +++           E 
Sbjct: 231 GAMVEKKILAKVHSRFIVSLAYAFE-TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           R          A     Q+VS L++L++    +I+ DLKP
Sbjct: 290 R----------AIFYTAQIVSGLEHLHQRN--IIYRDLKP 317

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
           H + E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +   E  AR 
Sbjct: 51  HTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARF 109

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               Y +        ++VSAL+YL+     V++ D+K 
Sbjct: 110 ----YGA--------EIVSALEYLHSRD--VVYRDIKL 133

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 44.8 bits (107), Expect = 1e-06
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 15/98 (15%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC 76
               E +I   ++HP +VKL+  F+        +L++  G DL   L +     E + + 
Sbjct: 72  RTKMERDILVEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130

Query: 77  LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               YL+        ++  AL +L+ +   +I+ DLKP
Sbjct: 131 ----YLA--------ELALALDHLHSLG--IIYRDLKP 154

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 9/99 (9%), Positives = 24/99 (24%), Gaps = 9/99 (9%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
             L   +       P   +L    +     ++  ++      DL+        +      
Sbjct: 132 RLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV-DLELLFSTLDFVYVFRG- 189

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                    +   +  Q++     L      ++H    P
Sbjct: 190 ----DEGILALHILTAQLIRLAANLQSKG--LVHGHFTP 222

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
             E  +   L  HP ++ L    E         +EY    +L  +L++ + +    A  +
Sbjct: 73  AGELEVLCKLGHHPNIINLLGACEHR-GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131

Query: 78  SQPYLST-SARSIVM---QVVSALKYLNEIKPPVIHYDL 112
           +    ST S++ ++     V   + YL++ +   IH DL
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDL 168

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + E  + K +  H  ++ L      D      ++EY    +L  YL+  +      +  +
Sbjct: 88  VSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146

Query: 78  SQPYLSTSAR----SIVMQVVSALKYLNEIKPPVIHYDL 112
           ++            S   Q+   ++YL   K   IH DL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDL 183

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + E  + K +  H  ++ L      D      ++EY    +L  YL+  +      +  +
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDI 192

Query: 78  SQPYLS--TSAR--SIVMQVVSALKYLNEIKPPVIHYDL 112
           ++      T     S   Q+   ++YL   K   IH DL
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDL 229

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA--R 75
           + E  + K +  H  ++ L      D      ++EY    +L  YL+  +      +   
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 180

Query: 76  CLSQPYLSTSARSIVM--QVVSALKYLNEIKPPVIHYDL 112
             +     +S   +    QV   ++YL   K   IH DL
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDL 217

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           L+E  + + L+HP V+K   V   D      + EY  G  L   +K   +          
Sbjct: 55  LKEVKVMRCLEHPNVLKFIGVLYKDKR-LNFITEYIKGGTLRGIIKSMDS---------- 103

Query: 79  QPYLSTSAR-SIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 S R S    + S + YL+ +   +IH DL  
Sbjct: 104 --QYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNS 136

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 18/109 (16%)

Query: 15  PRHALREYNIHKAL---DHPRVVKLYDVFEIDANS------FCTVLEYCDGHDLDFYLKQ 65
           PR   RE  I + L    HP +V+L   F               V+EY     L      
Sbjct: 60  PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTL------ 112

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           H+    R              +  + Q++ ++  L+     V H D+KP
Sbjct: 113 HRCC--RNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKP 159

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 16/99 (16%)

Query: 17  HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AEREAR 75
               E ++    D   +  L+  F+ D N+   V++Y  G DL   L + +    E  AR
Sbjct: 120 CFREERDVLVNGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                YL+        ++V A+  ++++    +H D+KP
Sbjct: 179 F----YLA--------EMVIAIDSVHQLH--YVHRDIKP 203

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
               E ++  +A +HP +V L+  F+ + +    V+EY +G DL F++++ + + E  AR
Sbjct: 98  WVQTEKHVFEQASNHPFLVGLHSCFQTE-SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 156

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y +        ++  AL YL+E    +I+ DLK 
Sbjct: 157 F----YSA--------EISLALNYLHERG--IIYRDLKL 181

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 16/108 (14%)

Query: 12  LPFPRHALREYNIHKALDHPRVVKLYDVF-----EIDANSFCTVLEYCDGHDLDFYLKQH 66
           L   R   RE  I + + HP VV L   F     + D      VLEY     +    + +
Sbjct: 73  LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVYRASRHY 131

Query: 67  KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             + +     +    +    +  + Q++ +L Y++ I   + H D+KP
Sbjct: 132 AKLKQT----MPMLLI----KLYMYQLLRSLAYIHSIG--ICHRDIKP 169

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
               E ++  +A +HP +V L+  F+ + +    V+EY +G DL F++++ + + E  AR
Sbjct: 55  WVQTEKHVFEQASNHPFLVGLHSCFQTE-SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 113

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y +        ++  AL YL+E    +I+ DLK 
Sbjct: 114 F----YSA--------EISLALNYLHERG--IIYRDLKL 138

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 26/108 (24%)

Query: 19  LREYNIHK--ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAERE 73
            RE  I++   L H  ++        D  +      V +Y +   L  YL ++       
Sbjct: 82  FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT------ 135

Query: 74  ARCLSQPYLSTSAR-SIVMQVVSALKYL------NEIKPPVIHYDLKP 114
                   ++      + +   S L +L       + KP + H DLK 
Sbjct: 136 --------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 42.7 bits (101), Expect = 6e-06
 Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 15/96 (15%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
             E  + +   H  ++         A     V ++C+G  L  +L   +T  E +     
Sbjct: 68  KNEVGVLRKTRHVNILLFMGY--STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL--- 122

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                     I  Q    + YL+     +IH DLK 
Sbjct: 123 --------IDIARQTARGMDYLH--AKSIIHRDLKS 148

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.4 bits (100), Expect = 7e-06
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E    + L HP  ++    +  +  ++  V+EYC G   D      K + E E      
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAW-LVMEYCLGSASDLLEVHKKPLQEVEIAA--- 158

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                    +    +  L YL+     +IH D+K G
Sbjct: 159 ---------VTHGALQGLAYLHSHN--MIHRDVKAG 183

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 7e-06
 Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 26/108 (24%)

Query: 19  LREYNIHK--ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAERE 73
            RE  I++   + H  ++           S      + +Y +   L  YLK         
Sbjct: 77  FRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT------ 130

Query: 74  ARCLSQPYLSTSAR-SIVMQVVSALKYL------NEIKPPVIHYDLKP 114
                   L   +   +    VS L +L       + KP + H DLK 
Sbjct: 131 --------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS 170

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
             + E  +   A +HP +  ++  F+    +   V+EY +G DL ++++         A 
Sbjct: 63  CTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y +        +++  L++L+     +++ DLK 
Sbjct: 122 F----YAA--------EIILGLQFLHSKG--IVYRDLKL 146

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 10/101 (9%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + E  +   L +H  +V L     I       + EYC   DL  +L++ +          
Sbjct: 74  MSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 132

Query: 78  SQPYLSTSAR------SIVMQVVSALKYLNEIKPPVIHYDL 112
           +       A       S   QV   + +L       IH DL
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDL 171

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 19/100 (19%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG---HDLDFYLKQHKTIAEREAR 75
             E ++ K  +HP +V     F I  N    V  +       DL   +  H         
Sbjct: 74  QGELHVSKLFNHPNIVPYRATF-IADNELWVVTSFMAYGSAKDL---ICTHFM------D 123

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            +++  ++     I+  V+ AL Y++ +    +H  +K  
Sbjct: 124 GMNELAIAY----ILQGVLKALDYIHHMG--YVHRSVKAS 157

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 26/108 (24%)

Query: 19  LREYNIHK--ALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAERE 73
            RE  ++    L H  ++          +S      +  Y +   L  YL+         
Sbjct: 48  FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT------ 101

Query: 74  ARCLSQPYLSTSAR-SIVMQVVSALKYL------NEIKPPVIHYDLKP 114
                   L T +   IV+ + S L +L       + KP + H DLK 
Sbjct: 102 --------LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS 141

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 16/96 (16%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E  +    D P V K Y  + +       ++EY  G      L+            L +
Sbjct: 69  QEITVLSQCDSPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLE---------PGPLDE 118

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             ++T    I+ +++  L YL+  K   IH D+K  
Sbjct: 119 TQIAT----ILREILKGLDYLHSEK--KIHRDIKAA 148

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 21/110 (19%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQ 65
           ++   +   RE  + K + H  V+ L DVF        F     V       DL      
Sbjct: 68  SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADL------ 120

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +  +         Q       + ++ Q++  LKY++     +IH DLKP 
Sbjct: 121 NNIVK-------CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPS 161

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
           +L   +  LRE  I   L    +++LYD+   D          VLE  D  DL       
Sbjct: 65  DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDL------K 117

Query: 67  KTIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           K          +  +L+    ++I+  ++    +++E    +IH DLKP 
Sbjct: 118 KLFK-------TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPA 158

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 21/110 (19%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQ 65
           +  F + A RE  + K + H  V+ L DVF  +   + F     V+ +    DL      
Sbjct: 64  SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDL------ 116

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            K +         +       + +V Q++  L+Y++     +IH DLKPG
Sbjct: 117 GKLMK-------HEKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPG 157

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
             E  I +   H  VV++Y  + +       ++E+  G  L   + Q           L+
Sbjct: 90  FNEVVIMRDYQHFNVVEMYKSYLVG-EELWVLMEFLQGGALTDIVSQ---------VRLN 139

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +  ++T    +   V+ AL YL+     VIH D+K  
Sbjct: 140 EEQIAT----VCEAVLQALAYLHAQG--VIHRDIKSD 170

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 39.9 bits (94), Expect = 5e-05
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
             + E  +       P + +L+  F+   +    V+EY +G DL ++++Q     E  A 
Sbjct: 66  CTMVEKRVLALPGKPPFLTQLHSCFQTM-DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV 124

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y +        ++   L +L      +I+ DLK 
Sbjct: 125 F----YAA--------EIAIGLFFLQSKG--IIYRDLKL 149

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 16/99 (16%)

Query: 17  HALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           H   E  +       P +V L+  F+        +L+Y +G +L  +L Q +   E E +
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEHEVQ 162

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                Y+         ++V AL++L+++   +I+ D+K 
Sbjct: 163 I----YVG--------EIVLALEHLHKLG--IIYRDIKL 187

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 15/106 (14%)

Query: 19  LREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL 77
           + E  +   L  H  +V L     +       + EYC   DL  YL+  +     +    
Sbjct: 96  MSELKMMTQLGSHENIVNLLGACTLS-GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEY 154

Query: 78  SQPYLSTSAR-----------SIVMQVVSALKYLNEIKPPVIHYDL 112
                                    QV   +++L       +H DL
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDL 198

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.9 bits (93), Expect = 7e-05
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 23/117 (19%)

Query: 14  FPRHALREYNIHKAL-----DHP---RVVKLYDVFEIDANS---FCTVLEYCDGHDLDFY 62
           +   AL E  + K++     + P    VV+L D F+I   +    C V E   GH L  +
Sbjct: 76  YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKW 134

Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           + +             Q       + I+ QV+  L YL+  K  +IH D+KP   L 
Sbjct: 135 IIKSN----------YQGLPLPCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILL 180

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 39.7 bits (93), Expect = 7e-05
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 14/96 (14%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ 79
           +E +I +  D P VVK Y  +  + + +  V+EYC    +         I     + L++
Sbjct: 73  KEISIMQQCDSPHVVKYYGSYFKNTDLW-IVMEYCGAGSVS-------DIIRLRNKTLTE 124

Query: 80  PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             ++T    I+   +  L+YL+ ++   IH D+K G
Sbjct: 125 DEIAT----ILQSTLKGLEYLHFMR--KIHRDIKAG 154

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 34/134 (25%)

Query: 12  LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH-------------- 57
           L  PR+  RE +I K LDH  ++KL D F    +      +  D H              
Sbjct: 41  LQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHH 100

Query: 58  ---------DLDFYLKQ-------HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLN 101
                    +    +         HK +  +      +          + Q+  A+ +++
Sbjct: 101 KSVIVNPSQNKYLNVIMEYVPDTLHKVL--KSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158

Query: 102 EIKPPVIHYDLKPG 115
            +   + H D+KP 
Sbjct: 159 SLG--ICHRDIKPQ 170

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 22/110 (20%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQ 65
           N    + A RE  + K ++H  ++ L +VF              V+E  D  +L      
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANL------ 153

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            + I                   ++ Q++  +K+L+     +IH DLKP 
Sbjct: 154 CQVI--------QMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPS 193

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 21/101 (20%)

Query: 18  ALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVL--EYCDGHDLDFYLKQHKTIAEREA 74
             RE  I + L   P ++ L D+   D  S    L  E+ +  D        +       
Sbjct: 77  IKREIKILENLRGGPNIITLADIV-KDPVSRTPALVFEHVNNTDF------KQLY----- 124

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
               Q       R  + +++ AL Y + +   ++H D+KP 
Sbjct: 125 ----QTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPH 159

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 26/112 (23%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ----- 65
           +  + +  LRE  I     H  ++ + D+                    D Y+ Q     
Sbjct: 65  HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE----------QMKDVYIVQDLMET 114

Query: 66  --HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             +K +        +Q   +      + Q++  LKY++     V+H DLKP 
Sbjct: 115 DLYKLLK-------TQHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPS 157

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 20/110 (18%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCT----VLEYCDGHDLDFYLKQH 66
           +    +  LRE  +     HP ++ L D+F             V E     DL       
Sbjct: 69  DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DL------A 121

Query: 67  KTIAEREARCLSQPYLSTS-ARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           + I ++      +  +S    +  +  ++  L  L+E    V+H DL PG
Sbjct: 122 QVIHDQ------RIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPG 163

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 24/105 (22%)

Query: 20  REYNIHKAL-DHPRVVKLYDVFEIDANSFCT-----VLEYCDG---HDLDFYLKQHKTIA 70
           +E N+ K    H  +   Y  F              V+E+C      DL         I 
Sbjct: 69  QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL---------IK 119

Query: 71  EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             +   L + +++     I  +++  L +L++ K  VIH D+K  
Sbjct: 120 NTKGNTLKEEWIAY----ICREILRGLSHLHQHK--VIHRDIKGQ 158

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 18/107 (16%)

Query: 14  FPRHALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           F   A  E  + + +          +V L   F    N  C V E    ++L   L+   
Sbjct: 93  FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNHLCLVFEML-SYNLYDLLRNTN 150

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      +       R    Q+ +AL +L   +  +IH DLKP
Sbjct: 151 ----------FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKP 187

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 16/100 (16%)

Query: 16  RHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
              + E  +       P + +L+  F+   +    V+EY +G DL ++++Q     E  A
Sbjct: 386 ECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 444

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 Y +        ++   L +L      +I+ DLK 
Sbjct: 445 VF----YAA--------EIAIGLFFLQSKG--IIYRDLKL 470

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 22/110 (20%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVF--EIDANSFCT---VLEYCDGHDLDFYLKQ 65
           N    + A RE  + K ++H  ++ L +VF  +     F     V+E  D  +L   ++ 
Sbjct: 64  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM 122

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
                    R             ++ Q++  +K+L+     +IH DLKP 
Sbjct: 123 ELD----HERM----------SYLLYQMLCGIKHLHSAG--IIHRDLKPS 156

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 16/97 (16%)

Query: 19  LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS 78
           + E  + +   +P +V   D + +  +    V+EY  G  L   + +          C+ 
Sbjct: 65  INEILVMRENKNPNIVNYLDSYLVG-DELWVVMEYLAGGSLTDVVTE---------TCMD 114

Query: 79  QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           +  ++     +  + + AL++L+  +  VIH D+K  
Sbjct: 115 EGQIAA----VCRECLQALEFLHSNQ--VIHRDIKSD 145

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 14/106 (13%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA 70
           +  F + A RE  + K + H  V+ L DVF   ++           +  DFYL       
Sbjct: 63  SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL---------RNFYDFYLVMP--FM 111

Query: 71  ERE-ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           + +  + +   +     + +V Q++  LKY++     V+H DLKPG
Sbjct: 112 QTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPG 155

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 26/112 (23%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQ----- 65
              F    LRE  I K   H  ++ ++++   D+            +  + Y+ Q     
Sbjct: 49  KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE----------NFNEVYIIQELMQT 98

Query: 66  --HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
             H+ I+       +Q       +  + Q + A+K L+     VIH DLKP 
Sbjct: 99  DLHRVIS-------TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPS 141

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 26/109 (23%)

Query: 19  LREYNIHK--ALDHPRVVKLY----DVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
           + E NI++   ++H  + +       V       +  V+EY     L  YL  H +    
Sbjct: 53  INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVS 112

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYL-------NEIKPPVIHYDLKP 114
             R             +   V   L YL       +  KP + H DL  
Sbjct: 113 SCR-------------LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 26/115 (22%)

Query: 14  FPRHALREYNIHKAL-----------DHPRVVKLYDVFEIDANS---FCTVLEYCDGHDL 59
           +   A  E  + + +               ++KL D F     +      V E   G +L
Sbjct: 58  YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENL 116

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              +K+++           +       + I  Q++  L Y+   +  +IH D+KP
Sbjct: 117 LALIKKYE----------HRGIPLIYVKQISKQLLLGLDYM-HRRCGIIHTDIKP 160

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 37.0 bits (85), Expect = 7e-04
 Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 19/110 (17%)

Query: 15  PRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCT------VLEYCDGHDLDFYLKQ 65
            + A          D    P+  K+  V   + + +             +       L  
Sbjct: 141 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS 200

Query: 66  HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
           H +  +             +   + +QV+  L  L+     ++H  L+P 
Sbjct: 201 HSSTHKSLVH--------HARLQLTLQVIRLLASLHHYG--LVHTYLRPV 240

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 28/109 (25%)

Query: 19  LREYNIH--KALDHPRVVKLYDVFEIDANS---FCTVLEYCDGHDLDFYLKQHKTIAERE 73
             EY ++    + H  +++     +   +       +  + +   L  +LK +       
Sbjct: 64  QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV------ 117

Query: 74  ARCLSQPYLSTSAR-SIVMQVVSALKYL--------NEIKPPVIHYDLK 113
                   +S +    I   +   L YL        +  KP + H D+K
Sbjct: 118 --------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 20/107 (18%)

Query: 14  FPRHALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK 67
           F R A  E  I + L      +   V+ + + F    N  C   E     +L   +K++K
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF-TFRNHICMTFELL-SMNLYELIKKNK 193

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                      Q +     R     ++  L  L++ +  +IH DLKP
Sbjct: 194 ----------FQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKP 228

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	122
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.93
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.92
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.92
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.91
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.91
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.91
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.91
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.91
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.91
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.91
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.9
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.9
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.9
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.9
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.9
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.9
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.9
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.9
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.9
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.9
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.9
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.9
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.9
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.9
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.9
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.9
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.9
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.89
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.89
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.89
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.89
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.89
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.89
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.89
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.89
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.89
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.89
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.89
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.89
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.89
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.89
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.89
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.89
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.89
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.89
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.89
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.89
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.89
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.89
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.89
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.89
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.88
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.88
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.88
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.88
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.88
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.88
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.88
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.88
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.88
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.88
3niz_A	311	Rhodanese family protein; structural genomics, str	99.88
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.88
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
3bhy_A	283	Death-associated protein kinase 3; death associate	99.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.88
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.88
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.88
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.88
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.88
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.88
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.88
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.88
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.88
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.88
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.88
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.88
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.87
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.87
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.87
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.87
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.87
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.87
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.87
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.87
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.87
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.87
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.87
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.87
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.87
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.87
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.87
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.87
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.87
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.87
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.87
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.87
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.87
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.87
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.87
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.87
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.87
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.87
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.87
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.87
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.87
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.87
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.87
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.86
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.86
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.86
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.86
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.86
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.86
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.86
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.86
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.86
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.86
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.86
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.86
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.86
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.86
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.86
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.86
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.86
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.86
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.85
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.85
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.85
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.85
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.85
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.85
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.85
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.85
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.85
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.85
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.85
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.85
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.85
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.85
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.85
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.85
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.85
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.85
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.85
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.85
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.85
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.85
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.84
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.84
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.84
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.84
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.84
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.84
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.84
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.84
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.84
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.84
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.84
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.84
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.83
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.83
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.83
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.83
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.83
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.83
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.83
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.83
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.82
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.82
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.82
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.82
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.81
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.81
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.81
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.81
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.81
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.81
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.81
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.8
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.8
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.8
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.8
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.8
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.8
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.79
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.79
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.78
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.78
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.78
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.78
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.77
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.75
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.73
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.59
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.59
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.52
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.1
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.77
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.77
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.1
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.8
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.77
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.61
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.34
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.34
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.68
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.62
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.06
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.9
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.1
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	93.25
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.96
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	84.14
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	82.07

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=3.8e-31  Score=171.07  Aligned_cols=117  Identities=22%  Similarity=0.286  Sum_probs=97.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH-hhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER-EARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~   79 (122)
                      ||||+++.. +....+.+.+|++++++++||||++++++|. +.+.+++|||||++|+|.+++...+..... .......
T Consensus        46 vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~  123 (299)
T 4asz_A           46 VAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT  123 (299)
T ss_dssp             EEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCC
T ss_pred             EEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCC
Confidence            689999765 3345678999999999999999999999998 777899999999999999999876542221 1122345


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.+++.++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       124 ~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~  163 (299)
T 4asz_A          124 ELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGE  163 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECC
Confidence            6888999999999999999999999  999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=1.1e-30  Score=171.70  Aligned_cols=108  Identities=22%  Similarity=0.364  Sum_probs=93.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.... .....+.+.+|+.++++++||||+++++++. +.+.+|+|||||+||+|.+++...+.          .
T Consensus        52 vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-~~~~~yiVmEy~~gg~L~~~i~~~~~----------~  120 (350)
T 4b9d_A           52 YVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKG----------V  120 (350)
T ss_dssp             EEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHTTT----------C
T ss_pred             EEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHHHcCC----------C
Confidence            6999998653 3345678899999999999999999999998 77889999999999999999975432          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       121 ~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~  160 (350)
T 4b9d_A          121 LFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTK  160 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECC
Confidence            3455566999999999999999999  999999999999975

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=8.2e-31  Score=170.12  Aligned_cols=118  Identities=22%  Similarity=0.352  Sum_probs=97.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch----hHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI----AEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~   76 (122)
                      ||||.++........+.+.+|+.++++++||||++++|+|. +.+.+++|||||++|+|.+++......    .....+.
T Consensus        59 VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~  137 (308)
T 4gt4_A           59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT  137 (308)
T ss_dssp             EEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CC
T ss_pred             EEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccc
Confidence            69999987755566788999999999999999999999998 677889999999999999999764321    1111222


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..+..++.|++.||.|||+.+  ++||||||+|||+++
T Consensus       138 ~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl~~  180 (308)
T 4gt4_A          138 VKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD  180 (308)
T ss_dssp             EECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEECC
Confidence            2346788899999999999999999999  999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.97  E-value=4e-31  Score=171.32  Aligned_cols=106  Identities=32%  Similarity=0.442  Sum_probs=92.7

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++.+.  .+....+.+.+|++++++++||||+++++++. +.+.+|+|||||+||+|.+++...+.+++       
T Consensus        60 ~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~yivmEy~~gG~L~~~i~~~~~l~e-------  131 (311)
T 4aw0_A           60 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFDE-------  131 (311)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSCCH-------
T ss_pred             EEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHHHcCCCCH-------
Confidence            699999754  13345678999999999999999999999998 77889999999999999999987555444       


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           ..+..++.|++.|+.|||+++  |+||||||+|||++.
T Consensus       132 -----~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~  167 (311)
T 4aw0_A          132 -----TCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNE  167 (311)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             -----HHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcC
Confidence                 445999999999999999999  999999999999975

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.8e-30  Score=169.83  Aligned_cols=118  Identities=21%  Similarity=0.309  Sum_probs=97.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---Hhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---REARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---~~~~~~   77 (122)
                      ||||+++.. +....+.+.+|++++++++||||++++++|. +.+.+++|||||++|+|.+++........   ......
T Consensus        74 vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~  151 (329)
T 4aoj_A           74 VAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA  151 (329)
T ss_dssp             EEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHTSSCC-----------
T ss_pred             EEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCCcHHHHHHhcCccccccccccccc
Confidence            699999765 3445688999999999999999999999998 77789999999999999999986543211   111122


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      ..++.+.+++.++.|++.||.|||+.+  |+||||||+|||++.+
T Consensus       152 ~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          152 PGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQG  194 (329)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCC
Confidence            356888999999999999999999999  9999999999999753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=2.4e-30  Score=166.60  Aligned_cols=109  Identities=28%  Similarity=0.373  Sum_probs=91.4

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+... ......+.+.+|++++++++||||++++++|..   ..+.+++|||||++|+|.+++...+.        
T Consensus        54 vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~--------  125 (290)
T 3fpq_A           54 VAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--------  125 (290)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSS--------
T ss_pred             EEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCC--------
Confidence            688988755 233456788999999999999999999999862   23568999999999999999986544        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +++..+..++.|++.|+.|||+.+++|+||||||+|||++.
T Consensus       126 ----l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~  166 (290)
T 3fpq_A          126 ----MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG  166 (290)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC
Confidence                44455599999999999999998778999999999999963

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=4.8e-30  Score=168.38  Aligned_cols=104  Identities=20%  Similarity=0.304  Sum_probs=91.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.... ....+.+.+|+.+++.++||||+++++++. +.+.+|||||||++|+|.+++.. +            .
T Consensus       102 vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~-~------------~  166 (346)
T 4fih_A          102 VAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R  166 (346)
T ss_dssp             EEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEECCCTTEEHHHHHHH-S------------C
T ss_pred             EEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHHc-C------------C
Confidence            6999997652 335677899999999999999999999998 77889999999999999998864 2            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       167 l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~  205 (346)
T 4fih_A          167 MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTH  205 (346)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECC
Confidence            455666999999999999999999  999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=1.1e-29  Score=162.37  Aligned_cols=105  Identities=30%  Similarity=0.516  Sum_probs=89.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++..  .....+.+.+|++++++++||||+++++++. +.+.+|+||||+ +|+|.+++...+.+         
T Consensus        41 vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~ivmEy~-~g~L~~~l~~~~~l---------  109 (275)
T 3hyh_A           41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYA-GNELFDYIVQRDKM---------  109 (275)
T ss_dssp             EEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECC-CEEHHHHHHHSCSC---------
T ss_pred             EEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEEeCC-CCCHHHHHHHcCCC---------
Confidence            6999998652  3335677899999999999999999999998 778899999999 58999998875444         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ++..+..++.|++.|+.|||+++  ++||||||+|||+++
T Consensus       110 ---~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~  147 (275)
T 3hyh_A          110 ---SEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDE  147 (275)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECT
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECC
Confidence               44555999999999999999999  999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=1.8e-29  Score=169.23  Aligned_cols=104  Identities=20%  Similarity=0.304  Sum_probs=91.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.... ....+.+.+|+.+|+.++||||++++++|. +.+.+|||||||+||+|.+++.. +            .
T Consensus       179 vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-~~~~~~iVmEy~~gG~L~~~i~~-~------------~  243 (423)
T 4fie_A          179 VAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGALTDIVTH-T------------R  243 (423)
T ss_dssp             EEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHHH-S------------C
T ss_pred             EEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEE-ECCEEEEEEeCCCCCcHHHHHhc-c------------C
Confidence            6999997653 345678999999999999999999999998 77889999999999999998864 2            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.||.|||+.+  |+||||||+|||++.
T Consensus       244 l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~  282 (423)
T 4fie_A          244 MNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTH  282 (423)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcC
Confidence            455666999999999999999999  999999999999975

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=163.81  Aligned_cols=107  Identities=16%  Similarity=0.252  Sum_probs=90.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... +....+.+.+|+.++++++||||+++++++. + +.+++|||||++|+|.+++....           .
T Consensus        61 vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~-~~~~iVmEy~~gGsL~~~l~~~~-----------~  127 (307)
T 3omv_A           61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-K-DNLAIVTQWCEGSSLYKHLHVQE-----------T  127 (307)
T ss_dssp             EEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-S-SSCEEEEECCSSCBHHHHHHTSC-----------C
T ss_pred             EEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-C-CeEEEEEEcCCCCCHHHHHhhcC-----------C
Confidence            6899987552 3345678999999999999999999999886 3 45789999999999999987532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+.+.++..++.|++.||.|||+.+  |+||||||+|||++++
T Consensus       128 ~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~  168 (307)
T 3omv_A          128 KFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEG  168 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCC
Confidence            4566677999999999999999999  9999999999999853

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=8.2e-30  Score=166.78  Aligned_cols=100  Identities=22%  Similarity=0.309  Sum_probs=87.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++....      ..+|+.+++.++||||+++++++. +.+.+|||||||+||+|.+++...+.+           
T Consensus        86 vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~l-----------  147 (336)
T 4g3f_A           86 CAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVR-EGPWVNIFMELLEGGSLGQLIKQMGCL-----------  147 (336)
T ss_dssp             EEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHHHHSSC-----------
T ss_pred             EEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeccCCCcHHHHHHHcCCC-----------
Confidence            68999976521      246999999999999999999998 778899999999999999999875444           


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ++..+..++.|++.||.|||+.+  |+||||||+|||++.
T Consensus       148 -~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~  185 (336)
T 4g3f_A          148 -PEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSS  185 (336)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECT
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeC
Confidence             44555999999999999999999  999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=1.3e-30  Score=168.72  Aligned_cols=106  Identities=23%  Similarity=0.285  Sum_probs=86.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++++.. .......+.+|++++++++||||+++++++. +.+.+|+|||||+||+|.+++...+.+          
T Consensus        55 vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~l----------  123 (304)
T 3ubd_A           55 YAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMF----------  123 (304)
T ss_dssp             EEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-ETTEEEEEECCCTTCEEHHHHHHHCCC----------
T ss_pred             EEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-ECCEEEEEEEcCCCCCHHHHHHhcCCC----------
Confidence            6899987652 2234457889999999999999999999998 778899999999999999999875544          


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ++..+..++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       124 --~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~  161 (304)
T 3ubd_A          124 --TEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDE  161 (304)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECT
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcC
Confidence              44455999999999999999999  999999999999975

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=3.7e-29  Score=161.84  Aligned_cols=110  Identities=20%  Similarity=0.350  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----------CeEEEEEeccCCCCHHHHHHhccch
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----------NSFCTVLEYCDGHDLDFYLKQHKTI   69 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----------~~~~lv~e~~~~~~L~~~l~~~~~~   69 (122)
                      ||||+++....+...+.+.+|+.++++++||||+++++++....           ..+|++||||.+|+|.+++......
T Consensus        33 vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~  112 (299)
T 4g31_A           33 YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI  112 (299)
T ss_dssp             EEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSG
T ss_pred             EEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCC
Confidence            69999976644455678899999999999999999999986322           2478999999999999999865443


Q ss_pred             hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..         ..+..++.++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       113 ~~---------~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~  153 (299)
T 4g31_A          113 EE---------RERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTM  153 (299)
T ss_dssp             GG---------SCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             Ch---------hHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECC
Confidence            22         223445889999999999999999  999999999999975

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.95  E-value=1.1e-28  Score=162.69  Aligned_cols=119  Identities=19%  Similarity=0.255  Sum_probs=96.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCC-CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch----hHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI----AEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~   75 (122)
                      ||||.++........+.+.+|+.++.+++| |||++++++|..+.+.+++|||||++|+|.+++......    ......
T Consensus        97 VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~  176 (353)
T 4ase_A           97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  176 (353)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC------
T ss_pred             EEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchh
Confidence            689999877555566789999999999965 899999999974566789999999999999999864331    111111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.||.|||+.+  ++||||||+|||+++
T Consensus       177 ~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~~NILl~~  220 (353)
T 4ase_A          177 LYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSE  220 (353)
T ss_dssp             -CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             hccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCccceeeCC
Confidence            22345788889999999999999999999  999999999999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.94  E-value=2.9e-27  Score=158.04  Aligned_cols=106  Identities=25%  Similarity=0.407  Sum_probs=88.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++... .....+.+.+|+.+|+.++||||+++++++..     +.+.+|+|||||. |+|.+++...+.      
T Consensus        82 vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~------  154 (398)
T 4b99_A           82 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQP------  154 (398)
T ss_dssp             EEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSC------
T ss_pred             EEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCC------
Confidence            6999998653 23355778899999999999999999998752     2357899999996 789998876444      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            +.+..+..++.|++.||.|||+.+  |+||||||+|||++.
T Consensus       155 ------l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~  193 (398)
T 4b99_A          155 ------LTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNE  193 (398)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCC
Confidence                  455555999999999999999999  999999999999975

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=1e-26  Score=150.73  Aligned_cols=105  Identities=21%  Similarity=0.239  Sum_probs=82.4

Q ss_pred             CeeeeccCCCCCcchHHHHH--HHHHHhhCCCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALR--EYNIHKALDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~--e~~~l~~~~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++..    ..+.+.+  |+..+.+++||||+++++++..+.   ..+++|||||++|+|.+++...         
T Consensus        29 VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------   95 (303)
T 3hmm_A           29 VAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---------   95 (303)
T ss_dssp             EEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC---------
T ss_pred             EEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC---------
Confidence            699998754    2233444  555556789999999999997333   2589999999999999999752         


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcC------CCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEI------KPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~------~~~i~h~dlk~~nill~~~  122 (122)
                          ++.+..+..++.|++.|+.|||+.      .++|+||||||+|||++.+
T Consensus        96 ----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~  144 (303)
T 3hmm_A           96 ----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC
Confidence                345556689999999999999986      2249999999999999853

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.93  E-value=4.8e-26  Score=158.03  Aligned_cols=106  Identities=26%  Similarity=0.363  Sum_probs=90.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++... .....+.+.+|+.+|+.++||||++++++|. +.+.++++||||.||+|.+++....           ..
T Consensus       185 ~AiK~i~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~-----------~~  251 (573)
T 3uto_A          185 FAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEH-----------NK  251 (573)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHHTCTT-----------SC
T ss_pred             EEEEEEecc-chhhHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeecCCCcHHHHHHHhC-----------CC
Confidence            689988765 2334677889999999999999999999998 7889999999999999999886422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       252 l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~  290 (573)
T 3uto_A          252 MSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTT  290 (573)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccC
Confidence            445555999999999999999999  999999999999973

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=3.1e-26  Score=160.30  Aligned_cols=107  Identities=23%  Similarity=0.287  Sum_probs=86.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHH---HHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL--NLPFPRHALRE---YNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e---~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++++..  .........+|   +.+++.++||||++++++|. +.+.+|+|||||.||+|..++...+.+++.   
T Consensus       217 ~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~-~~~~lylVmEy~~GGdL~~~l~~~~~l~E~---  292 (689)
T 3v5w_A          217 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEA---  292 (689)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHCCCCHH---
T ss_pred             EEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-ECCEEEEEEecCCCCcHHHHHHhcCCCCHH---
Confidence            6899987541  12223334444   55667779999999999998 788999999999999999999876554444   


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                               .+..++.|++.|+.|||+.+  |+||||||+|||++.+
T Consensus       293 ---------~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~  328 (689)
T 3v5w_A          293 ---------DMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEH  328 (689)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTT
T ss_pred             ---------HHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCC
Confidence                     44999999999999999999  9999999999999853

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=1.4e-25  Score=148.37  Aligned_cols=100  Identities=17%  Similarity=0.264  Sum_probs=86.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+...   ....++.+|+++++.+ +||||+++++++. +.+.+|+||||+++|+|.+++.               
T Consensus        52 vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~-~~~~~~lvmE~~~g~~L~~~~~---------------  112 (361)
T 4f9c_A           52 IALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFR-KNDHVVIAMPYLEHESFLDILN---------------  112 (361)
T ss_dssp             EEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE-ETTEEEEEEECCCCCCHHHHHT---------------
T ss_pred             EEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEE-ECCEEEEEEeCCCcccHHHHHc---------------
Confidence            588887654   2456788999999998 7999999999998 7788999999999999998874               


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+.++..++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       113 ~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~  152 (361)
T 4f9c_A          113 SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNR  152 (361)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEET
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeC
Confidence            2345566999999999999999999  999999999999974

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.92  E-value=1.7e-25  Score=155.20  Aligned_cols=104  Identities=16%  Similarity=0.082  Sum_probs=87.8

Q ss_pred             CeeeeccCCCC---------CcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh
Q psy4991           1 MCAKLLTTNLN---------LPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA   70 (122)
Q Consensus         1 vavK~~~~~~~---------~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~   70 (122)
                      +|||++.+...         +...+.+.+|+++|+++ .|+||++++++++ +.+..||||||++|++|.+.+...+.+.
T Consensus       262 ~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-d~~~~yLVMEyv~G~~L~d~i~~~~~l~  340 (569)
T 4azs_A          262 YVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-NAQSGWLVMEKLPGRLLSDMLAAGEEID  340 (569)
T ss_dssp             EEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-CSSEEEEEEECCCSEEHHHHHHTTCCCC
T ss_pred             eEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-ECCEEEEEEecCCCCcHHHHHHhCCCCC
Confidence            57888876521         12456788999999999 7999999999998 7888999999999999999998755432


Q ss_pred             HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          71 EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .               ..++.|++.||.|+|++|  |+||||||+|||++++
T Consensus       341 ~---------------~~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~d  375 (569)
T 4azs_A          341 R---------------EKILGSLLRSLAALEKQG--FWHDDVRPWNVMVDAR  375 (569)
T ss_dssp             H---------------HHHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTT
T ss_pred             H---------------HHHHHHHHHHHHHHHHCC--ceeccCchHhEEECCC
Confidence            2               357899999999999999  9999999999999753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.91  E-value=1.4e-24  Score=141.96  Aligned_cols=106  Identities=31%  Similarity=0.505  Sum_probs=91.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... +....+.+.+|+.+++.++||||+++++++. +.+..++||||+++|+|.+++...+.+          
T Consensus        43 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~l----------  111 (328)
T 3fe3_A           43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-TEKTLYLIMEYASGGEVFDYLVAHGRM----------  111 (328)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHHHCCC----------
T ss_pred             EEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCEEEEEEECCCCCcHHHHHHHcCCC----------
Confidence            6899887652 3345677889999999999999999999998 778899999999999999998765444          


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       112 --~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~  149 (328)
T 3fe3_A          112 --KEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDA  149 (328)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcC
Confidence              44455999999999999999999  999999999999975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.91  E-value=4.3e-24  Score=141.59  Aligned_cols=118  Identities=19%  Similarity=0.269  Sum_probs=95.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||||+++........+.+.+|+.+++.+ +||||+++++++. +.+.++++|||+.+|+|.+++.......    ....+
T Consensus       116 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  194 (370)
T 2psq_A          116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR  194 (370)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCC----------
T ss_pred             EEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc-cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccc
Confidence            5889888764444567889999999999 8999999999998 6778899999999999999998754311    11111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       195 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  238 (370)
T 2psq_A          195 VPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTE  238 (370)
T ss_dssp             -CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhEEECC
Confidence            22345677888999999999999999999  999999999999975

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.91  E-value=4.4e-24  Score=139.30  Aligned_cols=107  Identities=23%  Similarity=0.357  Sum_probs=92.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++........+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+++|.+++....           ..
T Consensus        80 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  147 (325)
T 3kul_A           80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT-RGRLAMIVTEYMENGSLDTFLRTHD-----------GQ  147 (325)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-GGGCCEEEEECCTTCBHHHHHHTTT-----------TC
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCccEEEeeCCCCCcHHHHHHhcc-----------cC
Confidence            58899887655556678999999999999999999999998 6778889999999999999986431           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       148 ~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~  186 (325)
T 3kul_A          148 FTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDS  186 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECC
Confidence            556667999999999999999999  999999999999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.91  E-value=9.6e-24  Score=139.62  Aligned_cols=106  Identities=27%  Similarity=0.462  Sum_probs=90.6

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|+++.....     ...+.+.+|+.+++.++||||+.+++++. +....+++|||+.+|+|.+++...+.       
T Consensus        40 ~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~-------  111 (361)
T 2yab_A           40 YAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-NRTDVVLILELVSGGELFDFLAQKES-------  111 (361)
T ss_dssp             EEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHTTCSC-------
T ss_pred             EEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhcCC-------
Confidence            588988865321     13577899999999999999999999998 77889999999999999999875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       112 -----l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~  150 (361)
T 2yab_A          112 -----LSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLD  150 (361)
T ss_dssp             -----CBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESC
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeC
Confidence                 445556999999999999999999  999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.91  E-value=5.7e-24  Score=141.15  Aligned_cols=107  Identities=24%  Similarity=0.399  Sum_probs=92.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++........+.+.+|+.++++++||||+++++++. ..+..+++|||+++|+|.+++....           ..
T Consensus        76 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~-----------~~  143 (373)
T 2qol_A           76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-KSKPVMIVTEYMENGSLDSFLRKHD-----------AQ  143 (373)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTT-----------TC
T ss_pred             EEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-eCCceEEEEeCCCCCcHHHHHHhCC-----------CC
Confidence            58898887654455678999999999999999999999998 6678889999999999999997532           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  182 (373)
T 2qol_A          144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINS  182 (373)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcC
Confidence            556667999999999999999999  999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.91  E-value=6.2e-24  Score=141.34  Aligned_cols=108  Identities=16%  Similarity=0.220  Sum_probs=91.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.... .....+.+.+|+.+++.++||||+++++++. +.+..++||||+.+|+|.+++.....          .
T Consensus        55 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------~  123 (389)
T 3gni_B           55 VTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFM----------D  123 (389)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHTCT----------T
T ss_pred             EEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-ECCEEEEEEEccCCCCHHHHHhhhcc----------c
Confidence            6899887653 2334567788999999999999999999998 77889999999999999999876421          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       124 ~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~  163 (389)
T 3gni_B          124 GMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISV  163 (389)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence            3556667999999999999999999  999999999999974

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.91  E-value=2.9e-24  Score=142.23  Aligned_cols=112  Identities=19%  Similarity=0.207  Sum_probs=94.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++..........+.+|+.+++.++||||+.+++++. +....++||||+.+|+|.+++.......     .....
T Consensus       104 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----~~~~~  177 (367)
T 3l9p_A          104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-QSLPRFILLELMAGGDLKSFLRETRPRP-----SQPSS  177 (367)
T ss_dssp             EEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHHSCCS-----SSCCC
T ss_pred             EEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCCCEEEEEeCCCCCHHHHHHhhcccc-----Ccccc
Confidence            58999876644555677889999999999999999999998 6677889999999999999998644311     11234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       178 ~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~  215 (367)
T 3l9p_A          178 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLT  215 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEES
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEe
Confidence            667788999999999999999999  99999999999997

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.90  E-value=3.8e-24  Score=142.07  Aligned_cols=107  Identities=22%  Similarity=0.302  Sum_probs=91.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++........+.+.+|+.+++.++||||+++++++. ..+..+++|||+++|+|.+++...+.           .
T Consensus       142 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~  209 (377)
T 3cbl_A          142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEGA-----------R  209 (377)
T ss_dssp             EEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHGG-----------G
T ss_pred             EEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-cCCCcEEEEEcCCCCCHHHHHHhcCC-----------C
Confidence            68998886644445567889999999999999999999998 66778999999999999999875322           2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       210 ~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~  248 (377)
T 3cbl_A          210 LRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTE  248 (377)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcC
Confidence            445566899999999999999999  999999999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.90  E-value=1.4e-23  Score=138.67  Aligned_cols=104  Identities=22%  Similarity=0.375  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++...  ....+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+|+|.+++...+.            
T Consensus        48 vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------  112 (361)
T 3uc3_A           48 VAVKYIERG--AAIDENVQREIINHRSLRHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERICNAGR------------  112 (361)
T ss_dssp             EEEEEEESS--TTSCHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSS------------
T ss_pred             EEEEEEecC--ccccHHHHHHHHHHHhCCCCCCCcEEEEEe-eCCEEEEEEEeCCCCCHHHHHHhcCC------------
Confidence            689988765  234477889999999999999999999998 77889999999999999999876443            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       113 ~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~  151 (361)
T 3uc3_A          113 FSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDG  151 (361)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcC
Confidence            444555999999999999999999  999999999999964

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.90  E-value=1.8e-23  Score=135.99  Aligned_cols=110  Identities=17%  Similarity=0.329  Sum_probs=90.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC------------------------------------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA------------------------------------   44 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------------------------------------   44 (122)
                      ||||+++....+...+.+.+|+.+++.++||||+++++++....                                    
T Consensus        34 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (332)
T 3qd2_B           34 YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIR  113 (332)
T ss_dssp             EEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------
T ss_pred             EEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCccccccccee
Confidence            68999986655556788999999999999999999999985222                                    


Q ss_pred             --------------------CeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCC
Q psy4991          45 --------------------NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIK  104 (122)
Q Consensus        45 --------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~  104 (122)
                                          ...+++|||+.+++|.+++.......         ...+..++.++.|++.|+.|||+.+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~  184 (332)
T 3qd2_B          114 RMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE---------DREHGVCLHIFIQIAEAVEFLHSKG  184 (332)
T ss_dssp             ------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG---------GSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc---------chhhHHHHHHHHHHHHHHHHHHhCC
Confidence                                13789999999999999998654322         2233456899999999999999999


Q ss_pred             CCeeeeCCCCCCccccc
Q psy4991         105 PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       105 ~~i~h~dlk~~nill~~  121 (122)
                        ++||||||+||+++.
T Consensus       185 --ivH~Dlkp~NIll~~  199 (332)
T 3qd2_B          185 --LMHRDLKPSNIFFTM  199 (332)
T ss_dssp             --EECCCCCGGGEEECT
T ss_pred             --eeecCCCcccEEEeC
Confidence              999999999999974

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.90  E-value=6e-24  Score=139.45  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=90.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++..  .....+.+.+|+.+++.++||||+.+++++. +.+..+++|||+++|+|...+...+.          
T Consensus        33 vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~----------  101 (337)
T 1o6l_A           33 YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV----------  101 (337)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSC----------
T ss_pred             EEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence            5889887541  2335677889999999999999999999998 77889999999999999998876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       102 --~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  140 (337)
T 1o6l_A          102 --FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDK  140 (337)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECC
Confidence              344555899999999999999999  999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.90  E-value=2.6e-23  Score=135.74  Aligned_cols=106  Identities=25%  Similarity=0.455  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|++......     ...+.+.+|+.+++.++||||+.+++++. +....+++|||+.+++|.+++.....       
T Consensus        39 ~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------  110 (326)
T 2y0a_A           39 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKES-------  110 (326)
T ss_dssp             EEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHTTSSC-------
T ss_pred             EEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEEcCCCCCHHHHHHhcCC-------
Confidence            588988765221     14577899999999999999999999998 77889999999999999999875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       111 -----~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~  149 (326)
T 2y0a_A          111 -----LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLD  149 (326)
T ss_dssp             -----CBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESC
T ss_pred             -----cCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEec
Confidence                 455566999999999999999999  999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.90  E-value=1e-23  Score=139.41  Aligned_cols=106  Identities=23%  Similarity=0.352  Sum_probs=90.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .....+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+|+|.+.+.....           
T Consensus        57 ~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~-----------  124 (362)
T 2bdw_A           57 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREF-----------  124 (362)
T ss_dssp             EEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHTTCSC-----------
T ss_pred             EEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHHHcCC-----------
Confidence            5889887653 2334577889999999999999999999998 77889999999999999988875433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       125 -~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~  163 (362)
T 2bdw_A          125 -YSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLAS  163 (362)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEec
Confidence             445556999999999999999999  999999999999964

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.90  E-value=1.2e-23  Score=136.08  Aligned_cols=118  Identities=24%  Similarity=0.380  Sum_probs=94.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---------   71 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---------   71 (122)
                      ||+|++.........+.+.+|+.+++.++||||+++++++. +.+..++++||+.+++|.+++........         
T Consensus        56 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (314)
T 2ivs_A           56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR  134 (314)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------
T ss_pred             EEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccc
Confidence            58898886654455678899999999999999999999998 66778999999999999999986533110         


Q ss_pred             ---HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 ---REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ---~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .........+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~NIli~~  185 (314)
T 2ivs_A          135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAE  185 (314)
T ss_dssp             ----------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred             cccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--CcccccchheEEEcC
Confidence               000001123677788999999999999999999  999999999999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.90  E-value=2.8e-23  Score=134.45  Aligned_cols=106  Identities=25%  Similarity=0.363  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+... .....+.+.+|+.++++++||||+++++++. +.+..+++|||+.+++|.+++....           ..
T Consensus        38 va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  104 (310)
T 3s95_A           38 MVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-KDKRLNFITEYIKGGTLRGIIKSMD-----------SQ  104 (310)
T ss_dssp             EEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHCC-----------TT
T ss_pred             EEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-cCCeeEEEEEecCCCcHHHHHHhcc-----------CC
Confidence            578877543 3445678899999999999999999999998 6788899999999999999997632           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       105 ~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~  143 (310)
T 3s95_A          105 YPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRE  143 (310)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECC
Confidence            556667999999999999999999  999999999999975

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=1.4e-23  Score=135.18  Aligned_cols=106  Identities=23%  Similarity=0.366  Sum_probs=90.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+....  .....+.+.+|+.+++.++||||+.+++++. +.+..+++|||+++++|.+++...+.          
T Consensus        39 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~----------  107 (294)
T 4eqm_A           39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-EDDCYYLVMEYIEGPTLSEYIESHGP----------  107 (294)
T ss_dssp             EEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHCS----------
T ss_pred             EEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-eCCeEEEEEeCCCCCCHHHHHHhcCC----------
Confidence            5888886542  2234567889999999999999999999998 77889999999999999999976543          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       108 --~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~  146 (294)
T 4eqm_A          108 --LSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDS  146 (294)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence              444555999999999999999999  999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.90  E-value=1.5e-23  Score=134.29  Aligned_cols=106  Identities=21%  Similarity=0.247  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++... .....+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+++|.+++.....           .
T Consensus        43 va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~  109 (289)
T 4fvq_A           43 VLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCV-CGDENILVQEFVKFGSLDTYLKKNKN-----------C  109 (289)
T ss_dssp             EEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-CTTCCEEEEECCTTCBHHHHHHHTGG-----------G
T ss_pred             hhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-eCCCCEEEEECCCCCCHHHHHHhCCC-----------C
Confidence            477877654 2345678899999999999999999999998 66778899999999999999976432           2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       110 ~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~  148 (289)
T 4fvq_A          110 INILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIR  148 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEec
Confidence            455566899999999999999999  999999999999964

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.90  E-value=1e-23  Score=137.41  Aligned_cols=106  Identities=25%  Similarity=0.426  Sum_probs=90.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++..  .....+.+.+|..+++.++||||+++++++. +....+++|||+.+|+|.+++.....          
T Consensus        34 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~----------  102 (318)
T 1fot_A           34 YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQR----------  102 (318)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHTSS----------
T ss_pred             EEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-eCCEEEEEEeCCCCCCHHHHHHHcCC----------
Confidence            5888887541  2234577889999999999999999999998 77889999999999999999986443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       103 --~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  141 (318)
T 1fot_A          103 --FPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDK  141 (318)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcC
Confidence              344455899999999999999999  999999999999974

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.90  E-value=3e-23  Score=142.03  Aligned_cols=106  Identities=24%  Similarity=0.297  Sum_probs=91.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++..  ....+.+.+|+.++++++||||+++++++. .....++||||+.+|+|.+++.....          ..
T Consensus       248 vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~----------~~  314 (495)
T 1opk_A          248 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR----------QE  314 (495)
T ss_dssp             EEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCT----------TT
T ss_pred             EEEEEecCc--ccchHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCcEEEEEEccCCCCHHHHHHhcCc----------CC
Confidence            689998865  334688999999999999999999999998 66778999999999999999976322          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.||.|||+.+  ++||||||+|||++.
T Consensus       315 ~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~  353 (495)
T 1opk_A          315 VSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGE  353 (495)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECC
Confidence            556667899999999999999999  999999999999964

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.90  E-value=1.2e-23  Score=138.67  Aligned_cols=106  Identities=29%  Similarity=0.405  Sum_probs=90.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+..  .....+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+|+|.+++...+.          
T Consensus        69 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~----------  137 (350)
T 1rdq_E           69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIGR----------  137 (350)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCC----------
T ss_pred             EEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHHHcCC----------
Confidence            5888886541  2335577889999999999999999999998 77889999999999999999986543          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       138 --~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  176 (350)
T 1rdq_E          138 --FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQ  176 (350)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECC
Confidence              344555999999999999999999  999999999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=6e-24  Score=138.60  Aligned_cols=106  Identities=26%  Similarity=0.406  Sum_probs=87.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+++|.+++.....            
T Consensus        35 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------  101 (323)
T 3tki_A           35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIG------------  101 (323)
T ss_dssp             EEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCTTEEGGGGSBTTTB------------
T ss_pred             EEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEEcCCCCcHHHHHhhcCC------------
Confidence            58898876544445577899999999999999999999998 77888999999999999888764333            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       102 ~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~  140 (323)
T 3tki_A          102 MPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDE  140 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeC
Confidence            455566999999999999999999  999999999999975

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.90  E-value=1.3e-23  Score=137.45  Aligned_cols=118  Identities=25%  Similarity=0.339  Sum_probs=94.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---------   71 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---------   71 (122)
                      ||+|+++........+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+++|.+++........         
T Consensus        80 vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  158 (343)
T 1luf_A           80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS  158 (343)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCC------------
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCCceEEEEecCCCCcHHHHHHHhCccccccccccccc
Confidence            58899887654445678899999999999999999999998 67788999999999999999986432110         


Q ss_pred             ---HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 ---REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ---~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .........+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~  209 (343)
T 1luf_A          159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGE  209 (343)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEECC
Confidence               000011245778888999999999999999999  999999999999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.90  E-value=1.7e-23  Score=141.60  Aligned_cols=106  Identities=22%  Similarity=0.325  Sum_probs=90.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|++.... .....+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+|+|.+.+...+.           
T Consensus        39 ~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~~-----------  106 (444)
T 3soa_A           39 YAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIVAREY-----------  106 (444)
T ss_dssp             EEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-CSSEEEEEECCCBCCBHHHHHHHCSC-----------
T ss_pred             EEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-ECCEEEEEEEeCCCCCHHHHHHHcCC-----------
Confidence            5788887652 2234567889999999999999999999998 77889999999999999998876544           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       107 -~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~  145 (444)
T 3soa_A          107 -YSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLAS  145 (444)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESB
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEec
Confidence             444555999999999999999999  999999999999973

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.90  E-value=2.3e-23  Score=135.96  Aligned_cols=106  Identities=25%  Similarity=0.384  Sum_probs=83.9

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..   .......+.+|+.+++.++||||+.+++++. ..+..+++|||+.+++|.+++...+.         
T Consensus        48 ~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------  117 (327)
T 3a62_A           48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMQLEREGI---------  117 (327)
T ss_dssp             EEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE-CSSCEEEEEECCTTEEHHHHHHHHSS---------
T ss_pred             EEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE-cCCEEEEEEeCCCCCcHHHHHHhCCC---------
Confidence            5889887652   2234566788999999999999999999998 77889999999999999999876443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       118 ---~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~  156 (327)
T 3a62_A          118 ---FMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNH  156 (327)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECT
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECC
Confidence               344455899999999999999999  999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.90  E-value=1.7e-23  Score=135.71  Aligned_cols=111  Identities=23%  Similarity=0.316  Sum_probs=92.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.... .....+.+.+|+.++++++||||+.+++++. +.+..+++|||+.+|+|.+++......         .
T Consensus        63 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~---------~  132 (309)
T 3p86_A           63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT-QPPNLSIVTEYLSRGSLYRLLHKSGAR---------E  132 (309)
T ss_dssp             EEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-STTCCEEEEECCTTCBHHHHHHSTTHH---------H
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCceEEEEecCCCCcHHHHHhhcCCC---------C
Confidence            5899887663 2234567889999999999999999999998 667788999999999999999754321         1


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+++++||||||+||+++.
T Consensus       133 ~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~  174 (309)
T 3p86_A          133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK  174 (309)
T ss_dssp             HSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC
Confidence            245566699999999999999998777999999999999975

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.90  E-value=1.7e-23  Score=139.84  Aligned_cols=106  Identities=25%  Similarity=0.346  Sum_probs=88.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .....+.+.+|..++.++ +||||+.+++++. +.+.+++||||+.+|+|...+...+.         
T Consensus        80 ~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~~---------  149 (396)
T 4dc2_A           80 YAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRK---------  149 (396)
T ss_dssp             EEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSS---------
T ss_pred             EEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-ECCEEEEEEEcCCCCcHHHHHHHcCC---------
Confidence            5899988652  233456688899999887 8999999999998 77889999999999999998876544         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       150 ---l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~  188 (396)
T 4dc2_A          150 ---LPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDS  188 (396)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECC
Confidence               444555999999999999999999  999999999999975

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=5.1e-23  Score=132.77  Aligned_cols=104  Identities=18%  Similarity=0.299  Sum_probs=89.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+..+++|||+.+|+|.+++...             .
T Consensus        48 vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~-------------~  112 (297)
T 3fxz_A           48 VAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET-------------C  112 (297)
T ss_dssp             EEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHS-------------C
T ss_pred             EEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-ECCEEEEEEECCCCCCHHHHHhhc-------------C
Confidence            5888887552 334677889999999999999999999998 677889999999999999998752             2


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~  151 (297)
T 3fxz_A          113 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM  151 (297)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECC
Confidence            445566999999999999999999  999999999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.90  E-value=5.3e-23  Score=139.34  Aligned_cols=106  Identities=21%  Similarity=0.269  Sum_probs=90.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++...   ..+.+.+|+.++++++||||+++++++.......+++|||+.+|+|.+++...+.          ..
T Consensus       219 vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~----------~~  285 (450)
T 1k9a_A          219 VAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SV  285 (450)
T ss_dssp             EEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCT----------TT
T ss_pred             EEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCC----------CC
Confidence            6899988652   4578999999999999999999999987455578999999999999999986432          22


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~  324 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSE  324 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECC
Confidence            455666999999999999999999  999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.90  E-value=9.2e-24  Score=140.68  Aligned_cols=106  Identities=26%  Similarity=0.461  Sum_probs=90.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+..  .....+.+.+|+.+++.++||||+.+++++. +....++++||+.+|+|..++.....          
T Consensus        43 ~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~----------  111 (384)
T 4fr4_A           43 YAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQQNVH----------  111 (384)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHTTCC----------
T ss_pred             EEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEecCCCCcHHHHHHhcCC----------
Confidence            5888886541  2335678889999999999999999999998 77889999999999999999876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       112 --l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~  150 (384)
T 4fr4_A          112 --FKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDE  150 (384)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECC
Confidence              444555999999999999999999  999999999999975

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=9.8e-24  Score=139.18  Aligned_cols=106  Identities=24%  Similarity=0.376  Sum_probs=89.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .....+.+.+|..+++.+ +||||+.+++++. +.+.+++||||+.+|+|..++...+.+        
T Consensus        51 ~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~--------  121 (353)
T 3txo_A           51 YAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-TPDRLFFVMEFVNGGDLMFHIQKSRRF--------  121 (353)
T ss_dssp             EEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSC--------
T ss_pred             EEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCCC--------
Confidence            5888887541  223456788999999988 7999999999998 778899999999999999998765443        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       122 ----~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~  159 (353)
T 3txo_A          122 ----DEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDH  159 (353)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECC
Confidence                44455999999999999999999  999999999999975

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.90  E-value=2.2e-23  Score=137.16  Aligned_cols=106  Identities=25%  Similarity=0.347  Sum_probs=89.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .....+.+.+|..++..+ +||||+++++++. +.+..+++|||+.+|+|..++...+.         
T Consensus        37 ~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~---------  106 (345)
T 3a8x_A           37 YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRK---------  106 (345)
T ss_dssp             EEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSS---------
T ss_pred             EEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence            5899988652  222456678899999988 8999999999998 77889999999999999999876443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       107 ---l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  145 (345)
T 3a8x_A          107 ---LPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDS  145 (345)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECC
Confidence               444555999999999999999999  999999999999975

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.90  E-value=9.9e-24  Score=138.77  Aligned_cols=119  Identities=20%  Similarity=0.265  Sum_probs=94.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA---------   70 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------   70 (122)
                      ||||+++........+.+.+|+.++..+ +||||+.+++++.......+++|||+.+|+|.+++.......         
T Consensus        55 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  134 (359)
T 3vhe_A           55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGAR  134 (359)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----
T ss_pred             EEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccch
Confidence            6899998764444567789999999999 799999999999845566889999999999999997643200         


Q ss_pred             ---------------------------------------------HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCC
Q psy4991          71 ---------------------------------------------EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKP  105 (122)
Q Consensus        71 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~  105 (122)
                                                                   ..........+.+..++.++.|++.|+.|||+.+ 
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-  213 (359)
T 3vhe_A          135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-  213 (359)
T ss_dssp             -------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             hhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC-
Confidence                                                         0000001122778889999999999999999999 


Q ss_pred             CeeeeCCCCCCccccc
Q psy4991         106 PVIHYDLKPGKPLFLF  121 (122)
Q Consensus       106 ~i~h~dlk~~nill~~  121 (122)
                       ++|+||||+||+++.
T Consensus       214 -ivH~Dikp~NIll~~  228 (359)
T 3vhe_A          214 -CIHRDLAARNILLSE  228 (359)
T ss_dssp             -CCCSCCSGGGEEECG
T ss_pred             -cccCCCChhhEEEcC
Confidence             999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=4.4e-23  Score=135.83  Aligned_cols=110  Identities=25%  Similarity=0.396  Sum_probs=90.5

Q ss_pred             CeeeeccCC----CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTN----LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|++...    ......+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+++|...+.....        
T Consensus        52 vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~--------  122 (351)
T 3c0i_A           52 FAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-SDGMLYMVFEFMDGADLCFEIVKRAD--------  122 (351)
T ss_dssp             EEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCSSCBHHHHHHHHHH--------
T ss_pred             EEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEeCCCCCCHHHHHHHhcc--------
Confidence            588887642    12224677899999999999999999999998 67889999999999999887764321        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ....+.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       123 ~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~  165 (351)
T 3c0i_A          123 AGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLAS  165 (351)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEec
Confidence            1234566677999999999999999999  999999999999964

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.89  E-value=1.8e-23  Score=134.47  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=87.7

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.....  ....+.+.+|+..+..++|+||+++++++. ..+..+++|||+.+++|.+++... .          
T Consensus        59 vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~-~----------  126 (286)
T 3uqc_A           59 VALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-TRAGGLVVAEWIRGGSLQEVADTS-P----------  126 (286)
T ss_dssp             EEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCCEEEHHHHHTTC-C----------
T ss_pred             EEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-ECCcEEEEEEecCCCCHHHHHhcC-C----------
Confidence            68999987632  223477899999999999999999999998 667899999999999999998542 1          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       127 ---~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~  164 (286)
T 3uqc_A          127 ---SPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSI  164 (286)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEET
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcC
Confidence               12234789999999999999999  999999999999975

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.89  E-value=6.2e-23  Score=132.97  Aligned_cols=105  Identities=24%  Similarity=0.364  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.... ....+.+.+|+.++.++ +||||+++++++. +.+..+++|||+.+++|.+++.....           
T Consensus        41 vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------  107 (316)
T 2ac3_A           41 YAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFE-EEDRFYLVFEKMRGGSILSHIHKRRH-----------  107 (316)
T ss_dssp             EEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHHSS-----------
T ss_pred             EEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHhccCC-----------
Confidence            5899987652 33567889999999985 7999999999998 67889999999999999999976443           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       108 -~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~  146 (316)
T 2ac3_A          108 -FNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEH  146 (316)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEcc
Confidence             344555899999999999999999  999999999999974

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.7e-23  Score=135.47  Aligned_cols=118  Identities=19%  Similarity=0.263  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch-hHH------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AER------   72 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~------   72 (122)
                      ||+|++.........+.+.+|+.+++++ +||||+.+++++. ..+..+++|||+++|+|.+++...... ...      
T Consensus        78 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  156 (344)
T 1rjb_A           78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN  156 (344)
T ss_dssp             EEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC---------
T ss_pred             EEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe-eCCccEEEEecCCCCcHHHHHhhccccccccccchhh
Confidence            5889988665555678899999999999 8999999999998 677889999999999999999764321 100      


Q ss_pred             ----hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 ----EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ........+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       157 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~  207 (344)
T 1rjb_A          157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTH  207 (344)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCSGGGEEEET
T ss_pred             hcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEEcC
Confidence                00011234677888999999999999999999  999999999999974

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.89  E-value=1e-22  Score=129.33  Aligned_cols=105  Identities=22%  Similarity=0.300  Sum_probs=90.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++..  ....+.+.+|+.+++.++||||+++++++. +....+++|||+++++|.+++.....           .
T Consensus        35 vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~  100 (268)
T 3sxs_A           35 VAVKMIKEG--SMSEDEFFQEAQTMMKLSHPKLVKFYGVCS-KEYPIYIVTEYISNGCLLNYLRSHGK-----------G  100 (268)
T ss_dssp             EEEEEECBT--TBCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHHHGG-----------G
T ss_pred             EEEEEeccC--CCcHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCceEEEEEccCCCcHHHHHHHcCC-----------C
Confidence            588988765  234577899999999999999999999998 67788999999999999999876422           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       101 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~  139 (268)
T 3sxs_A          101 LEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDR  139 (268)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECC
Confidence            455666999999999999999999  999999999999974

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.89  E-value=8e-23  Score=129.93  Aligned_cols=105  Identities=24%  Similarity=0.391  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++...  ....+.+.+|+.++++++||||+++++++. +.+..+++|||+++++|.+++....           ..
T Consensus        37 vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  102 (269)
T 4hcu_A           37 VAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQR-----------GL  102 (269)
T ss_dssp             EEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTCBHHHHHHTTT-----------TC
T ss_pred             EEEEEeccc--ccCHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCceEEEEEeCCCCcHHHHHHhcC-----------cc
Confidence            588988865  334577999999999999999999999998 6777899999999999999986532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~  141 (269)
T 4hcu_A          103 FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGE  141 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECG
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcC
Confidence            555666999999999999999999  999999999999964

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.89  E-value=2.4e-23  Score=138.37  Aligned_cols=118  Identities=19%  Similarity=0.284  Sum_probs=96.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH----Hhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE----REAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~----~~~~   75 (122)
                      ||+|+++........+.+.+|+++++.+ +||||+++++++. +.+..+++|||+.+|+|.+++........    ....
T Consensus       104 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  182 (382)
T 3tt0_A          104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH  182 (382)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCS
T ss_pred             EEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec-cCCceEEEEEecCCCcHHHHHHHhccccccccccccc
Confidence            5889888765555567889999999999 9999999999998 67778999999999999999987542110    0011


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       183 ~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          183 NPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTE  226 (382)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceEEEcC
Confidence            11235778888999999999999999999  999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.89  E-value=1.8e-23  Score=140.26  Aligned_cols=105  Identities=28%  Similarity=0.326  Sum_probs=88.9

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++.  ......+.+.+|..+++.++||||+++++++. +.+.+++||||+++|+|.+++...            
T Consensus        97 ~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~------------  163 (410)
T 3v8s_A           97 YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLMSNY------------  163 (410)
T ss_dssp             EEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHC------------
T ss_pred             EEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHHHHcC------------
Confidence            588888753  12234466889999999999999999999998 778899999999999999988642            


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+++..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       164 -~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~  203 (410)
T 3v8s_A          164 -DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDK  203 (410)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECC
Confidence             2445556899999999999999999  999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.89  E-value=1.8e-23  Score=141.32  Aligned_cols=107  Identities=22%  Similarity=0.296  Sum_probs=90.1

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++.  ......+.+.+|..++..++||||+.+++++. +.+.+++||||+.+|+|.+++....           
T Consensus       102 vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-~~~~~~lV~Ey~~gg~L~~~l~~~~-----------  169 (437)
T 4aw2_A          102 FAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFE-----------  169 (437)
T ss_dssp             EEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHTTT-----------
T ss_pred             EEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-eCCEEEEEEecCCCCcHHHHHHHcc-----------
Confidence            588888753  12233456889999999999999999999998 7788999999999999999997521           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       170 ~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~  210 (437)
T 4aw2_A          170 DRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDM  210 (437)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcC
Confidence            23555666999999999999999999  999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.89  E-value=6.2e-23  Score=140.31  Aligned_cols=106  Identities=30%  Similarity=0.473  Sum_probs=89.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .......+.+|+.+++.++||||+++++++. +....++||||+.+|+|.+.+.....           
T Consensus        65 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~-----------  132 (494)
T 3lij_A           65 RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRMK-----------  132 (494)
T ss_dssp             EEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSS-----------
T ss_pred             EEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEecCCCCcHHHHHHHcCC-----------
Confidence            5889887652 3345678899999999999999999999998 77889999999999999988876443           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       133 -~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~  171 (494)
T 3lij_A          133 -FNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLES  171 (494)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeC
Confidence             344555899999999999999999  999999999999963

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.89  E-value=1.1e-22  Score=132.21  Aligned_cols=111  Identities=27%  Similarity=0.415  Sum_probs=93.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++........+.+.+|+.+++.++||||+++++++. +.+..+++|||+. ++|.+++.....      ......
T Consensus        33 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~------~~~~~~  104 (317)
T 2pmi_A           33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-TENKLTLVFEFMD-NDLKKYMDSRTV------GNTPRG  104 (317)
T ss_dssp             EEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC-CTTEEEEEEECCC-CBHHHHHHHHHS------SSCCCC
T ss_pred             EEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE-ECCeEEEEEEecC-CCHHHHHHhccc------cccccC
Confidence            58998876655556688899999999999999999999998 7788999999998 799998875321      111234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       105 ~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~  143 (317)
T 2pmi_A          105 LELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINK  143 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcC
Confidence            667778999999999999999999  999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.89  E-value=7.9e-23  Score=133.42  Aligned_cols=102  Identities=30%  Similarity=0.466  Sum_probs=88.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++...    ......+|+.+++.+. ||||+++++++. +....+++|||+.+|+|.+++...+.           
T Consensus        39 vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------  102 (325)
T 3kn6_A           39 FAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIKKKKH-----------  102 (325)
T ss_dssp             EEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHCSC-----------
T ss_pred             EEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-cCCEEEEEEEccCCCcHHHHHHhcCC-----------
Confidence            588888644    4567789999999996 999999999998 77889999999999999999986543           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       103 -~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~  141 (325)
T 3kn6_A          103 -FSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTD  141 (325)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEec
Confidence             444555999999999999999999  999999999999963

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.89  E-value=7.1e-23  Score=143.19  Aligned_cols=106  Identities=24%  Similarity=0.380  Sum_probs=91.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++........+.+.+|+.++++++||||+++++++. . +..++||||+.+|+|.+++....           ..
T Consensus       366 vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~-~-~~~~lv~E~~~~g~L~~~l~~~~-----------~~  432 (613)
T 2ozo_A          366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-A-EALMLVMEMAGGGPLHKFLVGKR-----------EE  432 (613)
T ss_dssp             EEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-S-SSEEEEEECCTTCBHHHHHTTCT-----------TT
T ss_pred             EEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec-c-CCeEEEEEeCCCCcHHHHHhhcc-----------CC
Confidence            68999987755556788999999999999999999999997 4 45889999999999999986432           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       433 l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~  471 (613)
T 2ozo_A          433 IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVN  471 (613)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcC
Confidence            556667999999999999999999  999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.89  E-value=2.7e-23  Score=136.75  Aligned_cols=106  Identities=18%  Similarity=0.288  Sum_probs=89.4

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .....+.+..|..++..+ +||||+++++++. +.+..+++|||+.+|+|..++...+.         
T Consensus        45 vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~---------  114 (345)
T 1xjd_A           45 FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHK---------  114 (345)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSS---------
T ss_pred             EEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-eCCEEEEEEeCCCCCcHHHHHHHcCC---------
Confidence            5888887641  233456788899999877 9999999999998 77889999999999999999876444         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       115 ---~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  153 (345)
T 1xjd_A          115 ---FDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDK  153 (345)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECC
Confidence               344455899999999999999999  999999999999975

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=6.7e-23  Score=133.60  Aligned_cols=105  Identities=20%  Similarity=0.300  Sum_probs=89.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+...  ....+.+.+|+.+++.++||||+++++++. +.+..+++|||+++++|.+++....           ..
T Consensus        33 ~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~-----------~~   98 (321)
T 1tki_A           33 YMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSA-----------FE   98 (321)
T ss_dssp             EEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEE-ETTEEEEEECCCCCCBHHHHHTSSS-----------CC
T ss_pred             EEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEe-cCCEEEEEEEeCCCCCHHHHHHhcC-----------CC
Confidence            477877644  334567889999999999999999999998 6788999999999999999886432           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        99 ~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~  137 (321)
T 1tki_A           99 LNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQT  137 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcc
Confidence            556667999999999999999999  999999999999974

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=1e-22  Score=131.13  Aligned_cols=108  Identities=20%  Similarity=0.255  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.........+.+.+|+.+++.++|+||+.+++++... ....+++|||+++++|.+++....           .
T Consensus        53 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~  121 (302)
T 4e5w_A           53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-----------N  121 (302)
T ss_dssp             EEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHT-----------T
T ss_pred             EEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc-----------c
Confidence            5899988665555668899999999999999999999999733 256889999999999999986432           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       122 ~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~  161 (302)
T 4e5w_A          122 KINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVES  161 (302)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcC
Confidence            3555666999999999999999999  999999999999964

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.89  E-value=9.5e-23  Score=139.69  Aligned_cols=106  Identities=29%  Similarity=0.496  Sum_probs=89.4

Q ss_pred             CeeeeccCCCC------------CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccc
Q psy4991           1 MCAKLLTTNLN------------LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKT   68 (122)
Q Consensus         1 vavK~~~~~~~------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~   68 (122)
                      ||+|++.....            +...+.+.+|+.+++.++||||+++++++. +....++||||+.+|+|.+.+.....
T Consensus        64 ~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~  142 (504)
T 3q5i_A           64 KAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHK  142 (504)
T ss_dssp             EEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSC
T ss_pred             EEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-cCCEEEEEEecCCCCcHHHHHHHcCC
Confidence            58888875421            134577899999999999999999999998 77889999999999999988876443


Q ss_pred             hhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          69 IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                  +.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       143 ------------~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~  181 (504)
T 3q5i_A          143 ------------FDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLEN  181 (504)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESS
T ss_pred             ------------CCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEec
Confidence                        445555999999999999999999  999999999999974

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.89  E-value=1.4e-22  Score=131.79  Aligned_cols=106  Identities=27%  Similarity=0.438  Sum_probs=90.1

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|++......     ...+.+.+|+.+++.++||||+.+++++. +.+..++++||+.+++|.+++.....+      
T Consensus        40 vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~------  112 (321)
T 2a2a_A           40 YAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE-NRTDVVLILELVSGGELFDFLAQKESL------  112 (321)
T ss_dssp             EEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSCE------
T ss_pred             EEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCEEEEEEEcCCCCcHHHHHHhcCCC------
Confidence            588888765321     13577899999999999999999999998 778899999999999999999764433      


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 ------~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~  150 (321)
T 2a2a_A          113 ------SEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLD  150 (321)
T ss_dssp             ------EHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESC
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEec
Confidence                  44455999999999999999999  999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.1e-23  Score=137.66  Aligned_cols=108  Identities=22%  Similarity=0.243  Sum_probs=91.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++........+.+.+|+.++++++||||+++++++....+..+++|||+.+|+|.+++....           ..
T Consensus       120 vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~  188 (373)
T 3c1x_A          120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-----------HN  188 (373)
T ss_dssp             EEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTT-----------CC
T ss_pred             EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcc-----------cC
Confidence            4788887655555678899999999999999999999987645667889999999999999997532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       189 ~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  227 (373)
T 3c1x_A          189 PTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDE  227 (373)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECC
Confidence            445566899999999999999999  999999999999975

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.89  E-value=2e-23  Score=132.39  Aligned_cols=111  Identities=13%  Similarity=0.128  Sum_probs=92.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.... .....+.+.+|+.++++++||||+++++++... ....++++||+++|+|.+++.....          
T Consensus        36 ~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----------  105 (271)
T 3kmu_A           36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN----------  105 (271)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS----------
T ss_pred             EEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc----------
Confidence            5889888653 333456789999999999999999999999722 2678899999999999999975322          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+++++|+|+||+||+++.
T Consensus       106 ~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~  148 (271)
T 3kmu_A          106 FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE  148 (271)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC
Confidence            2456667799999999999999998778999999999999975

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.89  E-value=1.2e-22  Score=129.77  Aligned_cols=109  Identities=22%  Similarity=0.427  Sum_probs=92.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.... .......+.+|+..+..+ +||||+++++++. +.+..++++||+++++|.+++.....        ..
T Consensus        39 vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~  109 (289)
T 1x8b_A           39 YAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA-EDDHMLIQNEYCNGGSLADAISENYR--------IM  109 (289)
T ss_dssp             EEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHHHH--------HT
T ss_pred             EEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-cCCeEEEEEEecCCCcHHHHHHhhcc--------cc
Confidence            5889888653 333567788999999999 9999999999998 67889999999999999999976421        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       110 ~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~  149 (289)
T 1x8b_A          110 SYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFIS  149 (289)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEc
Confidence            34566777999999999999999999  99999999999997

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.89  E-value=7.4e-23  Score=132.90  Aligned_cols=116  Identities=18%  Similarity=0.244  Sum_probs=94.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++|+||+++++++. +.+..+++|||+.+|+|.+++.........  ......
T Consensus        58 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~--~~~~~~  134 (322)
T 1p4o_A           58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMAN--NPVLAP  134 (322)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHHH--CTTCCC
T ss_pred             EEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc-cCCccEEEEEeCCCCcHHHHHHHhchhhcc--CCCCCC
Confidence            57888876544445567889999999999999999999998 667788999999999999999864332111  111234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       135 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~  173 (322)
T 1p4o_A          135 PSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAE  173 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcC
Confidence            567788999999999999999999  999999999999975

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=7.8e-23  Score=133.74  Aligned_cols=107  Identities=19%  Similarity=0.298  Sum_probs=92.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++..........+.+|+.+++.++||||+++++++. ..+..+++|||+.+++|.+++....           ..
T Consensus        76 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  143 (333)
T 1mqb_A           76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKD-----------GE  143 (333)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTT-----------TC
T ss_pred             EEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-cCCCcEEEEeCCCCCcHHHHHHhCC-----------CC
Confidence            57888876644445677889999999999999999999998 6778899999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~  182 (333)
T 1mqb_A          144 FSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNS  182 (333)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECC
Confidence            556667999999999999999999  999999999999975

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.89  E-value=2.5e-23  Score=139.65  Aligned_cols=107  Identities=21%  Similarity=0.226  Sum_probs=90.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++++..  .....+.+.+|..++..++|+||+.+++++. +.+.+++||||+++|+|.+++...+           
T Consensus        89 vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-~~~~~~lVmE~~~gg~L~~~l~~~~-----------  156 (412)
T 2vd5_A           89 YAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFG-----------  156 (412)
T ss_dssp             EEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHS-----------
T ss_pred             EEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe-eCCEEEEEEcCCCCCcHHHHHHhcC-----------
Confidence            5889887531  2234466889999999999999999999998 7788999999999999999997532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       157 ~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~  197 (412)
T 2vd5_A          157 ERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDR  197 (412)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecC
Confidence            23455566899999999999999999  999999999999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.89  E-value=1.1e-22  Score=130.01  Aligned_cols=105  Identities=20%  Similarity=0.313  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++..  ....+.+.+|+.+++.++|+||+++++++. +.+..+++|||+.+++|.+++....           ..
T Consensus        51 vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  116 (283)
T 3gen_A           51 VAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMR-----------HR  116 (283)
T ss_dssp             EEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEECCCTTCBHHHHHHCGG-----------GC
T ss_pred             EEEEEecCC--CCCHHHHHHHHHHHhcCCCCCEeeEEEEEe-cCCCeEEEEeccCCCcHHHHHHHhc-----------cC
Confidence            588988865  234577899999999999999999999998 7778899999999999999987521           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       117 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~  155 (283)
T 3gen_A          117 FQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVND  155 (283)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcC
Confidence            555666999999999999999999  999999999999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.89  E-value=1.2e-22  Score=132.05  Aligned_cols=108  Identities=21%  Similarity=0.340  Sum_probs=90.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.........+.+.+|+.+++.++||||+.+++++... ....+++|||+.+++|.+++.....         ..
T Consensus        37 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~  107 (319)
T 4euu_A           37 FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN---------AY  107 (319)
T ss_dssp             EEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGG---------TT
T ss_pred             EEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhcc---------cc
Confidence            6899988654344567788999999999999999999998733 2378899999999999999975322         12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||++
T Consensus       108 ~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll  145 (319)
T 4euu_A          108 GLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMR  145 (319)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEE
Confidence            3667777999999999999999999  9999999999998

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.89  E-value=8.1e-23  Score=132.99  Aligned_cols=110  Identities=17%  Similarity=0.172  Sum_probs=90.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++...........+.+|+.+++.++||||+.+++++. +.+..++++||+.+|+|.+++.....        ....
T Consensus        57 vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~  127 (326)
T 3uim_A           57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPE--------SQPP  127 (326)
T ss_dssp             EEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC-CSSCCEEEEECCTTCBHHHHHHCCST--------TCCC
T ss_pred             EEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe-cCCceEEEEEeccCCCHHHHHHhccc--------cCCC
Confidence            58999887654445567899999999999999999999998 66778899999999999999976432        1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC---CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI---KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~---~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.   +  ++|+||||+||+++.
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~Dlkp~Nil~~~  169 (326)
T 3uim_A          128 LDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDE  169 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSSSSC--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeCCCchhhEEECC
Confidence            66777899999999999999998   8  999999999999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.89  E-value=5.5e-23  Score=135.62  Aligned_cols=106  Identities=19%  Similarity=0.254  Sum_probs=90.1

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .....+.+.+|..++..+ +||+|+.+++++. +.+..+++|||+.+|+|..++...+.         
T Consensus        48 ~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~---------  117 (353)
T 2i0e_A           48 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGR---------  117 (353)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSS---------
T ss_pred             EEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHhcCC---------
Confidence            5889887641  233567788999999988 8999999999998 77889999999999999999876444         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       118 ---~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~  156 (353)
T 2i0e_A          118 ---FKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDS  156 (353)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcC
Confidence               344555999999999999999999  999999999999975

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.89  E-value=1.6e-22  Score=129.69  Aligned_cols=109  Identities=27%  Similarity=0.449  Sum_probs=92.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|++.........+.+.+|+.+++.++||||+++++++. +....++++||+.+++|.+.+.....        ....
T Consensus        50 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~  120 (285)
T 3is5_A           50 RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQA--------RGKA  120 (285)
T ss_dssp             EEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCSCCBHHHHHHHHHH--------HTCC
T ss_pred             EEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-cCCeEEEEEEeCCCCcHHHHHHhhhh--------cccC
Confidence            47888877655556788999999999999999999999998 77889999999999999988865311        1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       121 ~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~  158 (285)
T 3is5_A          121 LSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQ  158 (285)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEe
Confidence            666777999999999999999999  99999999999994

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.89  E-value=2.1e-22  Score=131.19  Aligned_cols=104  Identities=21%  Similarity=0.308  Sum_probs=89.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.... ....+.+.+|+.+++.++|+||+.+++++. ..+..+++|||+.+++|.+++..             ..
T Consensus        73 vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-------------~~  137 (321)
T 2c30_A           73 VAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYL-VGEELWVLMEFLQGGALTDIVSQ-------------VR  137 (321)
T ss_dssp             EEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHTT-------------CC
T ss_pred             EEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEE-ECCEEEEEEecCCCCCHHHHHHh-------------cC
Confidence            6899887653 334677889999999999999999999998 66788999999999999988753             13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       138 l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          138 LNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTL  176 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECC
Confidence            456667999999999999999999  999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.89  E-value=2.8e-23  Score=141.61  Aligned_cols=106  Identities=27%  Similarity=0.438  Sum_probs=90.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++....  .....+.+.+|+.+++.++||||+++++++. +.+..++++||+.+|+|.+++...+.          
T Consensus        44 vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~----------  112 (476)
T 2y94_A           44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFDYICKNGR----------  112 (476)
T ss_dssp             EEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCSSEEHHHHTTSSSS----------
T ss_pred             EEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHHhcCC----------
Confidence            5888887541  2234577899999999999999999999998 77889999999999999998875433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       113 --l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~  151 (476)
T 2y94_A          113 --LDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDA  151 (476)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEec
Confidence              445556999999999999999999  999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.88  E-value=1.4e-22  Score=138.19  Aligned_cols=105  Identities=32%  Similarity=0.490  Sum_probs=90.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++....  .....+.+.+|+.+++.++||||+++++++. +.+..++++||+.+|+|.+.+.....          
T Consensus        54 ~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------  122 (484)
T 3nyv_A           54 CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKR----------  122 (484)
T ss_dssp             EEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSC----------
T ss_pred             EEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-eCCEEEEEEecCCCCCHHHHHHhcCC----------
Confidence            5899987652  2345678899999999999999999999998 77889999999999999998876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       123 --~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~  160 (484)
T 3nyv_A          123 --FSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLE  160 (484)
T ss_dssp             --CBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEES
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEe
Confidence              444555999999999999999999  99999999999994

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.88  E-value=4.2e-23  Score=135.43  Aligned_cols=105  Identities=29%  Similarity=0.476  Sum_probs=88.3

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++...  ......+.+.+|+.+++.++||||+++++++. +.+..+++|||+ +|+|.+++...+.          
T Consensus        37 vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-~~~~~~lv~E~~-~g~l~~~l~~~~~----------  104 (336)
T 3h4j_B           37 VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-TPTDIVMVIEYA-GGELFDYIVEKKR----------  104 (336)
T ss_dssp             EEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCC-CEEHHHHHHHHCS----------
T ss_pred             EEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-eCCEEEEEEECC-CCcHHHHHHHcCC----------
Confidence            588887653  12234567899999999999999999999998 778899999999 5899888876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       105 --l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~  143 (336)
T 3h4j_B          105 --MTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDD  143 (336)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcC
Confidence              444555999999999999999999  999999999999975

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.88  E-value=9.9e-23  Score=131.08  Aligned_cols=108  Identities=23%  Similarity=0.251  Sum_probs=90.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+.++++++||||+.+++++....+..++++||+.+|+|.+++....           ..
T Consensus        56 ~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----------~~  124 (298)
T 3f66_A           56 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-----------HN  124 (298)
T ss_dssp             EEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTT-----------CC
T ss_pred             EEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcc-----------cC
Confidence            4778777654445567889999999999999999999997646677889999999999999987422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       125 ~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~  163 (298)
T 3f66_A          125 PTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDE  163 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECC
Confidence            455566899999999999999999  999999999999975

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=6.8e-23  Score=143.75  Aligned_cols=105  Identities=27%  Similarity=0.433  Sum_probs=89.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... .....+.+.+|+.+++.++||||+++++++. . +..++||||+.+|+|.+++.....           
T Consensus       399 vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~-~~~~lv~E~~~~g~L~~~l~~~~~-----------  465 (635)
T 4fl3_A          399 VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-A-ESWMLVMEMAELGPLNKYLQQNRH-----------  465 (635)
T ss_dssp             EEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-S-SSEEEEEECCTTEEHHHHHHHCTT-----------
T ss_pred             EEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-c-CCEEEEEEccCCCCHHHHHhhCCC-----------
Confidence            6899988653 2335678999999999999999999999986 3 457899999999999999976433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       466 -l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~  504 (635)
T 4fl3_A          466 -VKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVT  504 (635)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeC
Confidence             444556999999999999999999  999999999999975

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.88  E-value=7e-23  Score=133.46  Aligned_cols=112  Identities=18%  Similarity=0.204  Sum_probs=93.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...........+.+|+.+++.++||||+++++++. .....+++|||+++++|.+++........     ....
T Consensus        63 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-----~~~~  136 (327)
T 2yfx_A           63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-QSLPRFILMELMAGGDLKSFLRETRPRPS-----QPSS  136 (327)
T ss_dssp             EEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTSCCSS-----STTS
T ss_pred             EEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-CCCCcEEEEecCCCCcHHHHHHhhccccc-----cccc
Confidence            58898876544455678899999999999999999999998 66778899999999999999986532110     1134


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       137 ~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~  174 (327)
T 2yfx_A          137 LAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLT  174 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEES
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEe
Confidence            667778999999999999999999  99999999999997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.88  E-value=6.8e-23  Score=139.83  Aligned_cols=105  Identities=30%  Similarity=0.487  Sum_probs=90.1

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++... ......+.+.+|+.+++.++||||+++++++. +....++++||+.+++|.+.+.....           
T Consensus        50 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~-----------  117 (486)
T 3mwu_A           50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKR-----------  117 (486)
T ss_dssp             EEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSS-----------
T ss_pred             EEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-cCCEEEEEEEcCCCCcHHHHHHhcCC-----------
Confidence            588988654 22345678899999999999999999999998 77889999999999999988876443           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                       +.+..+..++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       118 -~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~  155 (486)
T 3mwu_A          118 -FSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLE  155 (486)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEES
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEe
Confidence             445555999999999999999999  99999999999995

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.88  E-value=1.1e-22  Score=130.72  Aligned_cols=106  Identities=28%  Similarity=0.453  Sum_probs=88.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .....+.+.+|+.+++.++||||+++++++. +.+..+++|||+. +++...+....           .
T Consensus        30 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~   96 (292)
T 3o0g_A           30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCD-QDLKKYFDSCN-----------G   96 (292)
T ss_dssp             EEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHHTT-----------T
T ss_pred             EEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-eCCEEEEEEecCC-CCHHHHHHhCC-----------C
Confidence            5899887653 3345577889999999999999999999998 6788999999998 56666665421           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~  136 (292)
T 3o0g_A           97 DLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINR  136 (292)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence            3556666999999999999999999  999999999999975

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.88  E-value=9.6e-23  Score=133.20  Aligned_cols=118  Identities=19%  Similarity=0.269  Sum_probs=94.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||+|+++........+.+.+|+.+++.+ +||||+++++++. +.+..++++||+.+|+|.+++.......    ....+
T Consensus        70 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  148 (334)
T 2pvf_A           70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR  148 (334)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC----
T ss_pred             EEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc-cCCceEEEEECCCCCcHHHHHHHhccccccccccccc
Confidence            5888888664445567789999999999 8999999999998 6778899999999999999998643210    00111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       149 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          149 VPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTE  192 (334)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceEEEcC
Confidence            12234677888999999999999999999  999999999999974

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.88  E-value=6.1e-23  Score=132.69  Aligned_cols=118  Identities=19%  Similarity=0.221  Sum_probs=94.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh------HHh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA------ERE   73 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~   73 (122)
                      ||+|+++........+.+.+|+.+++++ +||||+++++++. ..+..++++||+.+|+|.+++.......      ...
T Consensus        56 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  134 (313)
T 1t46_A           56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI  134 (313)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC---------
T ss_pred             hHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence            5889888664444567889999999999 9999999999998 6777889999999999999998643210      000


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .......+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       135 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          135 MEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTH  180 (313)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEET
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEcC
Confidence            0111234778888999999999999999999  999999999999974

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.88  E-value=2.3e-22  Score=130.74  Aligned_cols=106  Identities=24%  Similarity=0.249  Sum_probs=91.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++........+.+.+|+.+++.++||||+.+++++... ...++++|||+.+++|.+++...             
T Consensus        63 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------  129 (318)
T 3lxp_A           63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-------------  129 (318)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-------------
T ss_pred             EEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-------------
Confidence            5899998765445667889999999999999999999999743 46788999999999999988642             


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       130 ~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~  169 (318)
T 3lxp_A          130 SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDN  169 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcC
Confidence            2455666999999999999999999  999999999999975

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.88  E-value=1.5e-22  Score=131.97  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=93.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH----hhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER----EAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~----~~~   75 (122)
                      +|+|.++........+.+.+|+.+++++ +||||+++++++. +.+..+++|||+++++|.+++.........    ...
T Consensus        55 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  133 (327)
T 1fvr_A           55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  133 (327)
T ss_dssp             EEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred             eeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-eCCceEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence            3788887654455667889999999999 8999999999998 678899999999999999999865422111    111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       134 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~  177 (327)
T 1fvr_A          134 STASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE  177 (327)
T ss_dssp             TBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECG
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcC
Confidence            22346788889999999999999999999  999999999999974

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.88  E-value=9.7e-23  Score=138.17  Aligned_cols=105  Identities=20%  Similarity=0.248  Sum_probs=89.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++..  ....+.+.+|+.+++.++||||+++++++.  .+..+++|||+.+|+|.+++.....          ..
T Consensus       215 vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~----------~~  280 (454)
T 1qcf_A          215 VAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEG----------SK  280 (454)
T ss_dssp             EEEEEECTT--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHHSHHH----------HT
T ss_pred             EEEEEecCC--CccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEeecCCCcHHHHHHhccC----------CC
Confidence            689998865  335688999999999999999999999986  4567899999999999999975321          12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       281 ~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~  319 (454)
T 1qcf_A          281 QPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA  319 (454)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECC
Confidence            345566899999999999999999  999999999999975

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.88  E-value=2.3e-22  Score=130.49  Aligned_cols=106  Identities=25%  Similarity=0.418  Sum_probs=87.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .....+.+.+|+.+++.++||||+++++++. +.+..+++|||+. ++|.+.+....           .
T Consensus        48 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~  114 (311)
T 3niz_A           48 VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-SERCLTLVFEFME-KDLKKVLDENK-----------T  114 (311)
T ss_dssp             EEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-CSSCEEEEEECCS-EEHHHHHHTCT-----------T
T ss_pred             EEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-cCCEEEEEEcCCC-CCHHHHHHhcc-----------C
Confidence            5889887652 3334577889999999999999999999998 7778899999998 68888776532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       115 ~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~  154 (311)
T 3niz_A          115 GLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINS  154 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECC
Confidence            3556667999999999999999999  999999999999974

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.88  E-value=6.6e-23  Score=133.74  Aligned_cols=118  Identities=19%  Similarity=0.265  Sum_probs=94.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH--hhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER--EARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~--~~~~~   77 (122)
                      ||+|.+.........+.+.+|+.+++.+ +||||+.+++++. ..+..+++|||+.+|+|.+++.........  .....
T Consensus        79 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  157 (333)
T 2i1m_A           79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA  157 (333)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC------
T ss_pred             HHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe-cCCceEEEEecCCCCcHHHHHHHhccccccccccccc
Confidence            5788887664444567789999999999 8999999999998 667789999999999999999764332110  00111


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       158 ~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~  199 (333)
T 2i1m_A          158 NSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTN  199 (333)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEG
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECC
Confidence            235677888999999999999999999  999999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=1.5e-22  Score=134.33  Aligned_cols=105  Identities=25%  Similarity=0.434  Sum_probs=88.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++... ....+.+.+|+.++++++||||+.+++++. +.+..++||||+++++|.+.+....           ..
T Consensus       117 vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~~~~L~~~l~~~~-----------~~  183 (373)
T 2x4f_A          117 LAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFE-SKNDIVLVMEYVDGGELFDRIIDES-----------YN  183 (373)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCEEHHHHHHTG-----------GG
T ss_pred             EEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHHHHhcC-----------CC
Confidence            5888887652 235677899999999999999999999998 7788999999999999988886532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       184 l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~  221 (373)
T 2x4f_A          184 LTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCV  221 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEe
Confidence            445556899999999999999999  99999999999984

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.88  E-value=1.3e-22  Score=137.56  Aligned_cols=105  Identities=24%  Similarity=0.333  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++...  ...+.+.+|+.++++++||||+++++++. + +..+++|||+.+|+|.+++.....          ..
T Consensus       211 vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~-~~~~iv~e~~~~gsL~~~l~~~~~----------~~  276 (452)
T 1fmk_A          211 VAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E-EPIYIVTEYMSKGSLLDFLKGETG----------KY  276 (452)
T ss_dssp             EEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEECCCTTCBHHHHHSHHHH----------TT
T ss_pred             EEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEc-C-CceEEEehhhcCCCHHHHHHhcCC----------CC
Confidence            6899988653  34578999999999999999999999986 4 667899999999999999974211          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       277 ~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~  315 (452)
T 1fmk_A          277 LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE  315 (452)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECC
Confidence            455667999999999999999999  999999999999974

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.88  E-value=2.5e-23  Score=140.67  Aligned_cols=106  Identities=27%  Similarity=0.402  Sum_probs=80.8

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++..  ........+.+|+.+++.++||||+.+++++. +.+.+++||||+.+|+|..++.....          
T Consensus       176 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------  244 (446)
T 4ejn_A          176 YAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERV----------  244 (446)
T ss_dssp             EEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-ETTEEEEEECCCSSCBHHHHHHHHSC----------
T ss_pred             EEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-eCCEEEEEEeeCCCCcHHHHHHhcCC----------
Confidence            588988754  23344567788999999999999999999998 67789999999999999998876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+ .+  ++||||||+|||++.
T Consensus       245 --~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~  284 (446)
T 4ejn_A          245 --FSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDK  284 (446)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECS
T ss_pred             --CCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECC
Confidence              3445558999999999999998 88  999999999999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.88  E-value=5.8e-23  Score=136.40  Aligned_cols=106  Identities=29%  Similarity=0.452  Sum_probs=79.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHH-HhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNI-HKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~-l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++++..  .......+.+|..+ ++.++||||+.+++++. +.+.++++|||+.+|+|..++...+.+        
T Consensus        66 ~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~--------  136 (373)
T 2r5t_A           66 YAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-TADKLYFVLDYINGGELFYHLQRERCF--------  136 (373)
T ss_dssp             EEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSSC--------
T ss_pred             EEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-eCCEEEEEEeCCCCCcHHHHHHhcCCC--------
Confidence            5899987652  23344566777776 46679999999999998 778899999999999999998765443        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       137 ----~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~  174 (373)
T 2r5t_A          137 ----LEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDS  174 (373)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECC
Confidence                34445899999999999999999  999999999999975

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.88  E-value=4.3e-22  Score=126.94  Aligned_cols=103  Identities=32%  Similarity=0.540  Sum_probs=88.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.... ....+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+++|.+++.....            
T Consensus        37 ~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~------------  102 (277)
T 3f3z_A           37 RAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFE-DNTDIYLVMELCTGGELFERVVHKRV------------  102 (277)
T ss_dssp             EEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHCS------------
T ss_pred             EEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCeEEEEEeccCCCcHHHHHHHcCC------------
Confidence            4778776653 234678899999999999999999999998 77889999999999999998876443            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~  139 (277)
T 3f3z_A          103 FRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLF  139 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEE
Confidence            444555999999999999999999  9999999999998

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=2.4e-22  Score=128.66  Aligned_cols=106  Identities=25%  Similarity=0.305  Sum_probs=91.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...  ....+.+.+|+.+++.++||||+.+++++. +.+..++++||+.+++|.+++.....          ..
T Consensus        41 vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~----------~~  107 (288)
T 3kfa_A           41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR----------QE  107 (288)
T ss_dssp             EEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHCCT----------TT
T ss_pred             EEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCEEEEEEcCCCCcHHHHHHhccc----------CC
Confidence            578888754  345678899999999999999999999998 67778999999999999999976322          34


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~  146 (288)
T 3kfa_A          108 VSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE  146 (288)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECG
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcC
Confidence            556677999999999999999999  999999999999964

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.88  E-value=6e-22  Score=126.55  Aligned_cols=106  Identities=25%  Similarity=0.453  Sum_probs=89.9

Q ss_pred             CeeeeccCCCC-----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN-----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|+++....     ....+.+.+|+.+++.++||||+.+++++. +....++++||+.+++|.+++.....       
T Consensus        33 ~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-------  104 (283)
T 3bhy_A           33 YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-NKTDVVLILELVSGGELFDFLAEKES-------  104 (283)
T ss_dssp             EEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSS-------
T ss_pred             eehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-CCCeEEEEEeecCCCcHHHHHHhcCC-------
Confidence            57888875421     124678899999999999999999999998 77889999999999999999875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       105 -----~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~  143 (283)
T 3bhy_A          105 -----LTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLD  143 (283)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESC
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEec
Confidence                 445566999999999999999999  999999999999964

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=4e-22  Score=130.04  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=85.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.++++++||||+.+++++. +. ..++++|++.+|+|.+++....           ..
T Consensus        47 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~-~~~~v~e~~~~g~L~~~l~~~~-----------~~  113 (327)
T 3poz_A           47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TS-TVQLITQLMPFGCLLDYVREHK-----------DN  113 (327)
T ss_dssp             EEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEE-SS-SEEEEEECCTTCBHHHHHHHST-----------TS
T ss_pred             EEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-cC-CeEEEEEecCCCcHHHHHHhcC-----------CC
Confidence            36777766545556788999999999999999999999997 43 3678999999999999987632           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       114 ~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~  152 (327)
T 3poz_A          114 IGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKT  152 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECC
Confidence            555666999999999999999999  999999999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.88  E-value=1e-22  Score=138.01  Aligned_cols=106  Identities=24%  Similarity=0.356  Sum_probs=87.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++.... .....+.+.+|+.+++.++|+||+.+++++..    ....+|++||++. ++|..++.....       
T Consensus        81 vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-------  152 (458)
T 3rp9_A           81 VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVY-------  152 (458)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCC-------
T ss_pred             EEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCC-------
Confidence            6899887652 23355778899999999999999999999842    2356899999986 899988875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.||.|||+.+  ++||||||+|||++.
T Consensus       153 -----l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~  191 (458)
T 3rp9_A          153 -----LTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQ  191 (458)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECC
Confidence                 455556999999999999999999  999999999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.88  E-value=2.9e-22  Score=128.03  Aligned_cols=106  Identities=23%  Similarity=0.352  Sum_probs=89.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .....+.+.+|+.++++++||||+.+++++. +.+..++++||+.+++|.+.+.....           
T Consensus        34 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~-----------  101 (284)
T 3kk8_A           34 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIVAREF-----------  101 (284)
T ss_dssp             EEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSS-----------
T ss_pred             EEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-cCCEEEEEEecCCCCCHHHHHHhcCC-----------
Confidence            5788887552 3334577889999999999999999999998 77888999999999999888876443           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       102 -~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~  140 (284)
T 3kk8_A          102 -YSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLAS  140 (284)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESS
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEec
Confidence             444555899999999999999999  999999999999963

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.88  E-value=8.8e-23  Score=134.49  Aligned_cols=106  Identities=25%  Similarity=0.416  Sum_probs=91.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+++|.+++...+.            
T Consensus        61 va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------  127 (360)
T 3eqc_A           61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGR------------  127 (360)
T ss_dssp             EEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHHHHSS------------
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-ECCEEEEEEECCCCCCHHHHHHHcCC------------
Confidence            58888887654555678899999999999999999999998 67889999999999999999976443            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+. +  ++|+||||+||+++.
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~  167 (360)
T 3eqc_A          128 IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS  167 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECC
Confidence            34455589999999999999996 8  999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=1.2e-22  Score=132.59  Aligned_cols=104  Identities=22%  Similarity=0.431  Sum_probs=85.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|+++... .....+.+.+|+.+++.++||||+.+++++. +....+++|||+. |+|.+++.....           
T Consensus        62 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~-----------  128 (329)
T 3gbz_A           62 VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-HNHRLHLIFEYAE-NDLKKYMDKNPD-----------  128 (329)
T ss_dssp             EEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHHCTT-----------
T ss_pred             EEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-cCCEEEEEEecCC-CCHHHHHhhcCC-----------
Confidence            5899887653 2334566789999999999999999999998 6788999999998 699999876543           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       129 -~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~  166 (329)
T 3gbz_A          129 -VSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLS  166 (329)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEE
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEe
Confidence             344555999999999999999999  99999999999994

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.88  E-value=9.7e-23  Score=131.02  Aligned_cols=107  Identities=25%  Similarity=0.276  Sum_probs=88.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++... .....+.+.+|+.+++.++||||+++++++.. +....+++|||+++++|.+++.....           
T Consensus        42 vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------  109 (295)
T 3ugc_A           42 VAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-----------  109 (295)
T ss_dssp             EEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGG-----------
T ss_pred             EEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhccc-----------
Confidence            588888755 23345778899999999999999999999852 23457899999999999999976432           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       110 ~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~  149 (295)
T 3ugc_A          110 RIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVEN  149 (295)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcC
Confidence            2455566999999999999999999  999999999999974

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.88  E-value=1.3e-22  Score=129.66  Aligned_cols=106  Identities=24%  Similarity=0.306  Sum_probs=88.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|..+........+.+.+|+.+++.++||||+++++++.  .+..+++|||+.+++|.+++....           ..
T Consensus        46 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  112 (281)
T 1mp8_A           46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRK-----------YS  112 (281)
T ss_dssp             EEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEEEEECCTTEEHHHHHHHTT-----------TT
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEEEEecCCCCCHHHHHHhcC-----------CC
Confidence            47787776544445678899999999999999999999985  356789999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  151 (281)
T 1mp8_A          113 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSS  151 (281)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECC
Confidence            455666999999999999999999  999999999999974

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.88  E-value=1.8e-22  Score=134.56  Aligned_cols=105  Identities=24%  Similarity=0.347  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.... ......+.+|+.+++.++||||+.+++++. +....+++|||+.+|+|.+++....           ..
T Consensus        79 ~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~-----------~~  145 (387)
T 1kob_A           79 FVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAED-----------YK  145 (387)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTT-----------CC
T ss_pred             EEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhhc-----------CC
Confidence            4778776542 224467889999999999999999999998 7788999999999999998876422           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       146 l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~  183 (387)
T 1kob_A          146 MSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCE  183 (387)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEe
Confidence            556667999999999999999999  99999999999996

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.88  E-value=1e-22  Score=131.81  Aligned_cols=119  Identities=19%  Similarity=0.250  Sum_probs=93.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||+|+++........+.+.+|+.++..+ +||||+.+++++.......++++||+.+++|.+++.......    .....
T Consensus        60 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  139 (316)
T 2xir_A           60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  139 (316)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC------
T ss_pred             EEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchh
Confidence            5889888764444567789999999999 799999999999745566899999999999999998643210    00000


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       140 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~  183 (316)
T 2xir_A          140 LYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSE  183 (316)
T ss_dssp             -CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             hhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECC
Confidence            11123567778999999999999999999  999999999999974

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.88  E-value=1.5e-22  Score=140.36  Aligned_cols=108  Identities=23%  Similarity=0.284  Sum_probs=91.1

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+.  ......+.+.+|+.+++.++||||+.+++++. +.+.+++||||+.+|+|..++...+.          
T Consensus       212 vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmEy~~gg~L~~~l~~~~~----------  280 (576)
T 2acx_A          212 YACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQ----------  280 (576)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHSSSS----------
T ss_pred             EEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCC----------
Confidence            588888654  12334567889999999999999999999998 77889999999999999998875322          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       281 ~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~  321 (576)
T 2acx_A          281 AGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDD  321 (576)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeC
Confidence            23556667999999999999999999  999999999999975

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=5e-22  Score=125.92  Aligned_cols=105  Identities=24%  Similarity=0.380  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+....  ...+.+.+|+.+++.++||||+++++++. +.+..++++||+.+++|.+++....           ..
T Consensus        35 vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~  100 (267)
T 3t9t_A           35 VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVTEFMEHGCLSDYLRTQR-----------GL  100 (267)
T ss_dssp             EEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEECCCTTCBHHHHHHHTT-----------TC
T ss_pred             EEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEc-cCCCeEEEEeCCCCCcHHHHHhhCc-----------cc
Confidence            5788888652  34578899999999999999999999998 6677889999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       101 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~  139 (267)
T 3t9t_A          101 FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGE  139 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECC
Confidence            455666999999999999999999  999999999999964

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.88  E-value=2.1e-22  Score=130.88  Aligned_cols=109  Identities=18%  Similarity=0.162  Sum_probs=91.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+..++++||+.+|+|.+++.....        ....
T Consensus        66 vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~  135 (321)
T 2qkw_B           66 VALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCD-ERNEMILIYKYMENGNLKRHLYGSDL--------PTMS  135 (321)
T ss_dssp             EEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECC-CTTCCEEEEECCTTCBTGGGSSSSCC--------CSCC
T ss_pred             EEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCeEEEEEEcCCCCcHHHHHhccCC--------Cccc
Confidence            5788777652 345678899999999999999999999998 67788899999999999887754321        1234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~  174 (321)
T 2qkw_B          136 MSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDE  174 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECT
T ss_pred             cCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECC
Confidence            677788999999999999999999  999999999999974

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.88  E-value=3.5e-22  Score=130.70  Aligned_cols=106  Identities=30%  Similarity=0.400  Sum_probs=89.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+.+++++. +.+..+++|||+.+++|.+++.....          
T Consensus        69 ~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------  137 (335)
T 2owb_A           69 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKA----------  137 (335)
T ss_dssp             EEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHHHCS----------
T ss_pred             EEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCCeEEEEEecCCCCCHHHHHhccCC----------
Confidence            4788876552  2235577889999999999999999999998 77889999999999999998876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       138 --l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~  176 (335)
T 2owb_A          138 --LTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNE  176 (335)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcC
Confidence              445556999999999999999999  999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.88  E-value=2.3e-22  Score=135.62  Aligned_cols=106  Identities=25%  Similarity=0.373  Sum_probs=88.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++.... .....+.+.+|+.+++.++|+||+.+++++....    ...|++|||+. ++|.+++.....       
T Consensus        54 vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-------  125 (432)
T 3n9x_A           54 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIF-------  125 (432)
T ss_dssp             EEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCC-------
T ss_pred             EEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCC-------
Confidence            6899987652 2335578899999999999999999999996332    56899999997 799998875433       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       126 -----l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~  164 (432)
T 3n9x_A          126 -----LTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQ  164 (432)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECC
Confidence                 455566999999999999999999  999999999999975

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.88  E-value=2.4e-22  Score=130.61  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=87.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCe------EEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANS------FCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||||+++... .....+.+.+|+.+++.++||||+.+++++. ....      .++++||+.+|+|.+++......    
T Consensus        54 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~----  128 (323)
T 3qup_A           54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL-RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG----  128 (323)
T ss_dssp             EEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE-CC-------CEEEEEECCTTCBHHHHHHHHHC-----
T ss_pred             EEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee-ccccccCCCccEEEEEeccCCcHHHHHHhhhcc----
Confidence            5888887653 3445678899999999999999999999997 3333      38999999999999998753221    


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .....+++..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       129 --~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~  172 (323)
T 3qup_A          129 --ENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAE  172 (323)
T ss_dssp             ----CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             --ccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcC
Confidence              11234677788999999999999999999  999999999999975

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.88  E-value=1.8e-22  Score=139.27  Aligned_cols=105  Identities=24%  Similarity=0.333  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++...  ...+.+.+|+.++++++|+||+++++++. + +..++||||+.+|+|.+++.....          ..
T Consensus       294 vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~-~~~~lv~e~~~~gsL~~~l~~~~~----------~~  359 (535)
T 2h8h_A          294 VAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E-EPIYIVTEYMSKGSLLDFLKGETG----------KY  359 (535)
T ss_dssp             EEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEECCCTTEEHHHHHSHHHH----------TT
T ss_pred             EEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEe-e-ccceEeeehhcCCcHHHHHhhcCC----------CC
Confidence            6899988653  34578999999999999999999999986 4 568899999999999999974311          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.||.|||+.+  ++||||||+|||++.
T Consensus       360 l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~  398 (535)
T 2h8h_A          360 LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE  398 (535)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcC
Confidence            455667999999999999999999  999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.87  E-value=4.8e-22  Score=127.73  Aligned_cols=106  Identities=30%  Similarity=0.400  Sum_probs=89.5

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+++++++. +.+..++++||+.+++|.+++.....          
T Consensus        43 ~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~----------  111 (294)
T 2rku_A           43 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKRRKA----------  111 (294)
T ss_dssp             EEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCS----------
T ss_pred             EEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-cCCEEEEEEecCCCCCHHHHHHhcCC----------
Confidence            4778776552  2234577889999999999999999999998 77889999999999999998876433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       112 --~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  150 (294)
T 2rku_A          112 --LTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNE  150 (294)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcC
Confidence              445556999999999999999999  999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.87  E-value=2.3e-22  Score=132.13  Aligned_cols=100  Identities=24%  Similarity=0.455  Sum_probs=84.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.+...     ...+|++++.++ +||||+.+++++. +.+..+++|||+.+|+|.+.+...+.           
T Consensus        50 ~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~i~~~~~-----------  112 (342)
T 2qr7_A           50 FAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYD-DGKYVYVVTELMKGGELLDKILRQKF-----------  112 (342)
T ss_dssp             EEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCTT-----------
T ss_pred             EEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEE-cCCEEEEEEeCCCCCcHHHHHHHcCC-----------
Confidence            58898876522     235688888887 8999999999998 77889999999999999998876443           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                       +.+..+..++.|++.|+.|||+.+  ++||||||+||++.
T Consensus       113 -~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~  150 (342)
T 2qr7_A          113 -FSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYV  150 (342)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEES
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEe
Confidence             444555999999999999999999  99999999999974

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.87  E-value=1.1e-21  Score=126.57  Aligned_cols=109  Identities=19%  Similarity=0.231  Sum_probs=91.6

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|.+....   .....+.+.+|+.+++.++||||+++++++. +.+..++++||+++++|.+++.....         
T Consensus        57 vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------  126 (307)
T 2nru_A           57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-DGDDLCLVYVYMPNGSLLDRLSCLDG---------  126 (307)
T ss_dssp             EEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTGGG---------
T ss_pred             EEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEe-cCCceEEEEEecCCCcHHHHHHhccC---------
Confidence            5788887542   2335678899999999999999999999998 66778899999999999998874221         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       127 ~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~  168 (307)
T 2nru_A          127 TPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANILLDE  168 (307)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEcC
Confidence            234666777999999999999999999  999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.87  E-value=2.5e-22  Score=129.87  Aligned_cols=106  Identities=27%  Similarity=0.396  Sum_probs=88.5

Q ss_pred             CeeeeccCCCCC-cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNL-PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++...... ...+.+.+|+.++++++||||+.+++++. +.+..++++||+.+++|..++...+.           
T Consensus        31 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~-----------   98 (311)
T 4agu_A           31 VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-RKRRLHLVFEYCDHTVLHELDRYQRG-----------   98 (311)
T ss_dssp             EEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHHTSSC-----------
T ss_pred             EEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-cCCeEEEEEEeCCCchHHHHHhhhcC-----------
Confidence            588888765322 23566789999999999999999999998 67888999999998888887765433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        99 -~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~  137 (311)
T 4agu_A           99 -VPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITK  137 (311)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcC
Confidence             445556999999999999999999  999999999999974

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.87  E-value=3.8e-22  Score=137.74  Aligned_cols=110  Identities=23%  Similarity=0.255  Sum_probs=92.0

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+..  .....+.+.+|+.+++.++||||+.+++++. +...++++|||+.||+|..++.....        ..
T Consensus       213 vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-~~~~l~lVmE~~~gg~L~~~l~~~~~--------~~  283 (543)
T 3c4z_A          213 YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE-TKTDLCLVMTIMNGGDIRYHIYNVDE--------DN  283 (543)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHHTSST--------TS
T ss_pred             EEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-eCCEEEEEEEeccCCCHHHHHHHhhc--------cc
Confidence            5888887541  2234577889999999999999999999998 77889999999999999998875321        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       284 ~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~  324 (543)
T 3c4z_A          284 PGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDD  324 (543)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeC
Confidence            34666777999999999999999999  999999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.87  E-value=1.4e-22  Score=128.92  Aligned_cols=106  Identities=26%  Similarity=0.405  Sum_probs=90.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+.+++.++||||+++++++. +.+..++++||+.+++|.+++....            .
T Consensus        35 vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~------------~  101 (276)
T 2yex_A           35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDI------------G  101 (276)
T ss_dssp             EEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEGGGGSBTTT------------B
T ss_pred             EEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-cCCEEEEEEEecCCCcHHHHHhhcc------------C
Confidence            57888876544455678899999999999999999999998 6788899999999899988775432            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       102 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~  140 (276)
T 2yex_A          102 MPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDE  140 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEcc
Confidence            455566999999999999999999  999999999999975

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=2.6e-22  Score=128.93  Aligned_cols=108  Identities=22%  Similarity=0.244  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      +|+|.+.........+.+.+|+.+++.++||||+.+++++.......++++||+.+++|.+++....           ..
T Consensus        52 ~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-----------~~  120 (298)
T 3pls_A           52 CAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-----------RN  120 (298)
T ss_dssp             EEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTT-----------CC
T ss_pred             eeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccc-----------cC
Confidence            4788887654444567889999999999999999999999745555589999999999999987522           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       121 ~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~  159 (298)
T 3pls_A          121 PTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDE  159 (298)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcC
Confidence            455666899999999999999999  999999999999975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.87  E-value=3.3e-23  Score=134.24  Aligned_cols=107  Identities=26%  Similarity=0.375  Sum_probs=87.8

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|+++....  ....+.+.+|+.+++.++||||+.+++++....   ...+++|||+++++|.+++...+.       
T Consensus        40 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-------  112 (311)
T 3ork_A           40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------  112 (311)
T ss_dssp             EEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCS-------
T ss_pred             EEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCC-------
Confidence            58999887632  224467889999999999999999999986222   235899999999999999876443       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 -----~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~  151 (311)
T 3ork_A          113 -----MTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISA  151 (311)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcC
Confidence                 444555999999999999999999  999999999999964

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.87  E-value=5.5e-22  Score=131.03  Aligned_cols=107  Identities=16%  Similarity=0.119  Sum_probs=89.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++...    ....+.+|+.++..+.   |+|++.+++++. ..+..++||||+.+|+|.+++......       .
T Consensus        98 vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~  165 (365)
T 3e7e_A           98 FVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL-FQNGSVLVGELYSYGTLLNAINLYKNT-------P  165 (365)
T ss_dssp             EEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE-CSSCEEEEECCCCSCBHHHHHHHHHTS-------T
T ss_pred             EEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeee-cCCCcEEEEeccCCCcHHHHHHHhhcc-------c
Confidence            588888754    4567888888888886   899999999998 677888999999999999999753211       1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       166 ~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          166 EKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGN  207 (365)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecc
Confidence            235677788999999999999999999  999999999999975

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=5e-22  Score=127.34  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++........+.+.+|+.+++.++||||+++++++.  .+..++++||+.+++|.+++....           ..
T Consensus        40 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------~~  106 (287)
T 1u59_A           40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFLVGKR-----------EE  106 (287)
T ss_dssp             EEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHTTCT-----------TT
T ss_pred             EEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEEEEeCCCCCHHHHHHhCC-----------cc
Confidence            58898887644456678899999999999999999999995  345789999999999999886421           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       107 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~  145 (287)
T 1u59_A          107 IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVN  145 (287)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcC
Confidence            556677999999999999999999  999999999999974

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.87  E-value=3.7e-22  Score=127.55  Aligned_cols=106  Identities=25%  Similarity=0.361  Sum_probs=89.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.++||||+++++++. + +..++++||+.+++|.+++....           ..
T Consensus        43 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~-~~~~~v~e~~~~~~L~~~l~~~~-----------~~  109 (281)
T 3cc6_A           43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-E-EPTWIIMELYPYGELGHYLERNK-----------NS  109 (281)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-S-SSCEEEEECCTTCBHHHHHHHHT-----------TT
T ss_pred             EEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-C-CCCEEEEecCCCCCHHHHHHhcc-----------cc
Confidence            57888877644456688899999999999999999999986 3 44579999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       110 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~  148 (281)
T 3cc6_A          110 LKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVAS  148 (281)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECC
Confidence            455666899999999999999999  999999999999974

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.87  E-value=4.1e-22  Score=127.94  Aligned_cols=105  Identities=28%  Similarity=0.441  Sum_probs=86.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... .....+.+.+|+.+++.++||||+++++++.  .+..++++||+.+++|.+++.....           
T Consensus        47 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~-----------  113 (291)
T 1xbb_A           47 VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQQNRH-----------  113 (291)
T ss_dssp             EEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHHHCTT-----------
T ss_pred             EEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCcEEEEEeCCCCCHHHHHHhCcC-----------
Confidence            5788887653 2334678899999999999999999999985  4567899999999999999986433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       114 -~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~  152 (291)
T 1xbb_A          114 -VKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVT  152 (291)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEE
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeC
Confidence             444556999999999999999999  999999999999974

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.87  E-value=2.9e-22  Score=130.45  Aligned_cols=104  Identities=14%  Similarity=0.159  Sum_probs=85.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC---CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID---ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++...  ........+|+.++++++||||+++++++...   ...++++|||+++|+|.+++...           
T Consensus        50 vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----------  116 (322)
T 3soc_A           50 VAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----------  116 (322)
T ss_dssp             EEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-----------
T ss_pred             EEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc-----------
Confidence            689988754  22345556788889999999999999999733   23478999999999999999752           


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcC----------CCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEI----------KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~----------~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..++.++.|++.|+.|||+.          +  ++|+||||+||+++.
T Consensus       117 --~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~  166 (322)
T 3soc_A          117 --VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKN  166 (322)
T ss_dssp             --CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECT
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECC
Confidence              245566699999999999999998          8  999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.87  E-value=2.8e-22  Score=133.80  Aligned_cols=108  Identities=21%  Similarity=0.340  Sum_probs=90.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-CeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-NSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++.........+.+.+|+++++.++||||+.+++++.... ...+++|||+.+|+|.+++.....         ..
T Consensus        37 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~  107 (396)
T 4eut_A           37 FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN---------AY  107 (396)
T ss_dssp             EEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGG---------TT
T ss_pred             EEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhc---------cc
Confidence            68999886543445677889999999999999999999987332 368899999999999999875322         12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++||||||+||++
T Consensus       108 ~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll  145 (396)
T 4eut_A          108 GLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMR  145 (396)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEE
Confidence            3666777999999999999999999  9999999999998

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.87  E-value=2.1e-22  Score=128.60  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=88.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .......+.+|+.+++.++||||+.+++++. +....+++|||+.+++|.+.+.....          
T Consensus        37 vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~----------  105 (279)
T 3fdn_A           37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSK----------  105 (279)
T ss_dssp             EEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSS----------
T ss_pred             EEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-cCCEEEEEEecCCCCcHHHHHHhcCC----------
Confidence            4778775431  1224567889999999999999999999998 77889999999999999999876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       106 --~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~  144 (279)
T 3fdn_A          106 --FDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGS  144 (279)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcC
Confidence              344555899999999999999999  999999999999964

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.87  E-value=3e-22  Score=128.15  Aligned_cols=106  Identities=27%  Similarity=0.464  Sum_probs=89.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+++++++. +.+..++++||+++++|.+++...+.          
T Consensus        42 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------  110 (284)
T 2vgo_A           42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQKHGR----------  110 (284)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSS----------
T ss_pred             EEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-cCCEEEEEEEeCCCCcHHHHHHhcCC----------
Confidence            5778776431  2234577889999999999999999999998 77889999999999999999876443          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       111 --~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  149 (284)
T 2vgo_A          111 --FDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGY  149 (284)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcC
Confidence              344555999999999999999999  999999999999974

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.87  E-value=1.7e-22  Score=130.04  Aligned_cols=114  Identities=20%  Similarity=0.238  Sum_probs=81.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.++||||+++++++. ..+..++++||+.+++|.+++......    .......
T Consensus        43 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~  117 (303)
T 2vwi_A           43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-VKDELWLVMKLLSGGSVLDIIKHIVAK----GEHKSGV  117 (303)
T ss_dssp             EEEECCC----------------CCCCCCCTTBCCEEEEEE-SSSCEEEEEECCTTCBHHHHHHHHHHT----TTTTTCS
T ss_pred             EEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-ecCCcEEEehhccCCchHHHHHHHhhc----cccccCC
Confidence            57888876543445677889999999999999999999998 667889999999999999998752110    0011234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       118 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  156 (303)
T 2vwi_A          118 LDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGE  156 (303)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcC
Confidence            677788999999999999999999  999999999999974

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.87  E-value=2.9e-22  Score=131.92  Aligned_cols=103  Identities=28%  Similarity=0.429  Sum_probs=82.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++...   ..+.+.+|+.++++++||||+.+++++. +.+..+++|||+.+++|.+++...+.            
T Consensus        81 vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------  144 (349)
T 2w4o_A           81 YALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFE-TPTEISLVLELVTGGELFDRIVEKGY------------  144 (349)
T ss_dssp             EEEEEEEC-------------CHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHTTCSS------------
T ss_pred             EEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEe-cCCeEEEEEEeCCCCCHHHHHHhcCC------------
Confidence            5888887552   3456788999999999999999999998 77889999999999999998875433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       145 ~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~  183 (349)
T 2w4o_A          145 YSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYAT  183 (349)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEec
Confidence            445556999999999999999999  999999999999963

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.87  E-value=1.2e-21  Score=126.35  Aligned_cols=105  Identities=22%  Similarity=0.306  Sum_probs=91.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++.........+.+.+|+.+++.++|+||+.+++++. +....++++||+.+++|.+++..             ..
T Consensus        50 vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~-------------~~  115 (303)
T 3a7i_A           50 VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEP-------------GP  115 (303)
T ss_dssp             EEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHTT-------------SC
T ss_pred             EEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-cCCeEEEEEEeCCCCcHHHHHhc-------------CC
Confidence            58898887655556788999999999999999999999998 66788999999999999998863             23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       116 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  154 (303)
T 3a7i_A          116 LDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSE  154 (303)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECC
Confidence            455666999999999999999999  999999999999974

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.87  E-value=4e-22  Score=129.92  Aligned_cols=106  Identities=19%  Similarity=0.221  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.........+.+.+|+.+++.++||||+.+++++.  .+..++++||+.+|+|.+++....           ..
T Consensus        45 v~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~-----------~~  111 (325)
T 3kex_A           45 VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHR-----------GA  111 (325)
T ss_dssp             EEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEEEEEECCTTCBSHHHHHSSG-----------GG
T ss_pred             EEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccEEEEEeCCCCCHHHHHHHcc-----------cc
Confidence            35666655444445567888999999999999999999886  355789999999999999987532           13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       112 ~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~  150 (325)
T 3kex_A          112 LGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKS  150 (325)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECC
Confidence            445566999999999999999999  999999999999964

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.87  E-value=4.5e-22  Score=140.42  Aligned_cols=106  Identities=19%  Similarity=0.254  Sum_probs=90.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++++..  .....+.+..|..++..+ +|++|+.+++++. +.+.+++||||+.+|+|..++...+.         
T Consensus       369 vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-~~~~~~lV~E~~~gg~L~~~l~~~~~---------  438 (674)
T 3pfq_A          369 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-TMDRLYFVMEYVNGGDLMYHIQQVGR---------  438 (674)
T ss_dssp             EEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-CSSEEEEEEECCCSCBHHHHHHHHSS---------
T ss_pred             EEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-eCCEEEEEEeCcCCCcHHHHHHhcCC---------
Confidence            5899887541  234567788999999988 7999999999998 77889999999999999999986544         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..++.++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       439 ---~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~  477 (674)
T 3pfq_A          439 ---FKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDS  477 (674)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECS
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcC
Confidence               344455999999999999999999  999999999999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.87  E-value=4.2e-22  Score=127.81  Aligned_cols=106  Identities=30%  Similarity=0.461  Sum_probs=88.7

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+.... .....+.+.+|+.+++.++||||+++++++. +.+..+++|||+. ++|.+++....           .
T Consensus        29 ~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~   95 (288)
T 1ob3_A           29 FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLVLVFEHLD-QDLKKLLDVCE-----------G   95 (288)
T ss_dssp             EEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-CSSCEEEEEECCS-EEHHHHHHTST-----------T
T ss_pred             EEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-cCCeEEEEEEecC-CCHHHHHHhcc-----------c
Confidence            5888887552 2334577889999999999999999999998 6778999999998 59988887532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        96 ~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  135 (288)
T 1ob3_A           96 GLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINR  135 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence            3455566899999999999999999  999999999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=2.8e-22  Score=131.23  Aligned_cols=118  Identities=29%  Similarity=0.424  Sum_probs=89.1

Q ss_pred             CeeeeccCC----CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH-----
Q psy4991           1 MCAKLLTTN----LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE-----   71 (122)
Q Consensus         1 vavK~~~~~----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-----   71 (122)
                      ||+|++...    ......+.+.+|+.+++.++||||+++++++. +.+..+++|||+++|+|.+++........     
T Consensus        54 vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~  132 (345)
T 3hko_A           54 RAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM  132 (345)
T ss_dssp             EEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEE
T ss_pred             EEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-cCCeEEEEEeCCCCCcHHHHHHHhhccccccccc
Confidence            578887643    13445678899999999999999999999998 77889999999999999998853111000     


Q ss_pred             ---------------Hhh--------hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 ---------------REA--------RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ---------------~~~--------~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                     ...        ......+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~  203 (345)
T 3hko_A          133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPENFLFST  203 (345)
T ss_dssp             EEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESC
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEec
Confidence                           000        000111245567889999999999999999  999999999999964

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=3.8e-22  Score=129.23  Aligned_cols=106  Identities=26%  Similarity=0.304  Sum_probs=89.9

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++||||+.+++++. ..+..++++||+.+++|.+++.....          
T Consensus        62 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------  130 (309)
T 2h34_A           62 VALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-IDGQLYVDMRLINGVDLAAMLRRQGP----------  130 (309)
T ss_dssp             EEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCCCEEHHHHHHHHCS----------
T ss_pred             EEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-eCCeEEEEEEecCCCCHHHHHHhcCC----------
Confidence            5888887652  1223477889999999999999999999998 67788999999999999999976433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       131 --~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~  169 (309)
T 2h34_A          131 --LAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSA  169 (309)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcC
Confidence              445556999999999999999999  999999999999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.87  E-value=1.1e-21  Score=125.68  Aligned_cols=106  Identities=30%  Similarity=0.473  Sum_probs=90.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++... ......+.+.+|+.++++++||||+++++++. +.+..++++||+.+++|.+.+.....           
T Consensus        50 valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-----------  117 (287)
T 2wei_A           50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEIIKRKR-----------  117 (287)
T ss_dssp             EEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSS-----------
T ss_pred             EEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-CCCeEEEEEEccCCCCHHHHHHhcCC-----------
Confidence            588888754 23445678899999999999999999999998 77889999999999999888875433           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       118 -~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~  156 (287)
T 2wei_A          118 -FSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLES  156 (287)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESC
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEec
Confidence             445566999999999999999999  999999999999963

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.87  E-value=2.9e-22  Score=131.23  Aligned_cols=106  Identities=26%  Similarity=0.357  Sum_probs=88.5

Q ss_pred             CeeeeccCCCCC-------cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCC-CHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNLNL-------PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGH-DLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~~~-------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~   72 (122)
                      ||||++......       ...+.+.+|+.+++.++||||+++++++. +.+..++++||+.+| +|..++.....    
T Consensus        52 vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~g~~l~~~~~~~~~----  126 (335)
T 3dls_A           52 VVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-NQGFFQLVMEKHGSGLDLFAFIDRHPR----  126 (335)
T ss_dssp             EEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTSCBHHHHHHTCCC----
T ss_pred             EEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-eCCEEEEEEEeCCCCccHHHHHHhcCC----
Confidence            588988765211       13456778999999999999999999998 778899999999766 99998876443    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                              +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       127 --------l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~  165 (335)
T 3dls_A          127 --------LDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAE  165 (335)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcC
Confidence                    444555999999999999999999  999999999999975

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.87  E-value=4.5e-22  Score=126.92  Aligned_cols=107  Identities=28%  Similarity=0.539  Sum_probs=90.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++||||+++++++. +.+..++++||+.+++|.+++....           
T Consensus        39 vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----------  106 (278)
T 3cok_A           39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCHNGEMNRYLKNRV-----------  106 (278)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-CSSEEEEEEECCTTEEHHHHHHTCS-----------
T ss_pred             EEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-cCCeEEEEEecCCCCcHHHHHhhcc-----------
Confidence            5788876441  2234577899999999999999999999998 7788999999999999999987531           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       107 ~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~  147 (278)
T 3cok_A          107 KPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTR  147 (278)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcC
Confidence            24556667999999999999999999  999999999999974

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.87  E-value=1.5e-21  Score=126.07  Aligned_cols=103  Identities=26%  Similarity=0.412  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++... ....+.+.+|+.+++.++||||+.+++++. +.+..++++||+.+++|.+++...+.            
T Consensus        37 vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~------------  102 (304)
T 2jam_A           37 FALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYE-STTHYYLVMQLVSGGELFDRILERGV------------  102 (304)
T ss_dssp             EEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSC------------
T ss_pred             EEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcc-cCCEEEEEEEcCCCccHHHHHHHcCC------------
Confidence            5888887652 223467889999999999999999999998 77889999999999999998876443            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++
T Consensus       103 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~  139 (304)
T 2jam_A          103 YTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLY  139 (304)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEE
Confidence            344555899999999999999999  9999999999998

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.87  E-value=4.7e-22  Score=126.63  Aligned_cols=106  Identities=31%  Similarity=0.479  Sum_probs=89.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++||||+.+++++. ..+..++++||+.+++|.+++.....          
T Consensus        39 vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----------  107 (276)
T 2h6d_A           39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-TPTDFFMVMEYVSGGELFDYICKHGR----------  107 (276)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHCS----------
T ss_pred             EEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-cCCeEEEEEeccCCCcHHHHHhccCC----------
Confidence            5788876441  2334577889999999999999999999998 77889999999999999999976433          


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       108 --~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  146 (276)
T 2h6d_A          108 --VEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDA  146 (276)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECT
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECC
Confidence              344555999999999999999999  999999999999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.87  E-value=3.6e-22  Score=128.57  Aligned_cols=92  Identities=28%  Similarity=0.399  Sum_probs=78.3

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQV   93 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   93 (122)
                      .+.+.+|+.+++.++||||+++++++.. .....+++|||+.+++|.+++.             ...+.+..++.++.|+
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~~~qi  146 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-------------LKPLSEDQARFYFQDL  146 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-------------SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-------------cCCCCHHHHHHHHHHH
Confidence            3668899999999999999999999973 2567899999999888865432             1345667779999999


Q ss_pred             HHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          94 VSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        94 ~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|+.|||+.+  ++|+||||+||+++.
T Consensus       147 ~~~l~~lH~~~--ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A          147 IKGIEYLHYQK--IIHRDIKPSNLLVGE  172 (298)
T ss_dssp             HHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             HHHHHHHHHCC--eeccCCCHHHEEECC
Confidence            99999999999  999999999999975

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.87  E-value=1e-21  Score=125.98  Aligned_cols=108  Identities=28%  Similarity=0.393  Sum_probs=88.8

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+... ......+.+.+|+.+++.++||||+.+++++..   .....++++||+++++|.+++.....        
T Consensus        54 va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------  125 (290)
T 1t4h_A           54 VAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--------  125 (290)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS--------
T ss_pred             EEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccC--------
Confidence            467777654 233456778899999999999999999998852   24568999999999999999976433        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                          +.+..++.++.|++.|+.|||+.+++++|+||||+||+++
T Consensus       126 ----~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~  165 (290)
T 1t4h_A          126 ----MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE
Confidence                3445558999999999999999866799999999999996

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.86  E-value=1.7e-21  Score=126.96  Aligned_cols=107  Identities=24%  Similarity=0.245  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++... .....+.+.+|+.+++.++|+||+.+++++.. +....+++|||+++++|.+++.....           
T Consensus        55 vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------  122 (327)
T 3lxl_A           55 VAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-----------  122 (327)
T ss_dssp             EEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG-----------
T ss_pred             EEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhccc-----------
Confidence            578888765 23345678999999999999999999998852 45668899999999999999875321           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       123 ~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~  162 (327)
T 3lxl_A          123 RLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVES  162 (327)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECC
Confidence            2455666999999999999999999  999999999999964

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.86  E-value=2.2e-21  Score=126.64  Aligned_cols=105  Identities=19%  Similarity=0.239  Sum_probs=88.4

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCC
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPY   81 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~   81 (122)
                      |+|.+.........+.+.+|+.+++.++||||+.+++++. .. ..+++++++.+|+|.+++....           ..+
T Consensus        48 ~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~-~~~~v~~~~~~g~L~~~l~~~~-----------~~~  114 (327)
T 3lzb_A           48 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TS-TVQLITQLMPFGCLLDYVREHK-----------DNI  114 (327)
T ss_dssp             EEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE-SS-SEEEEECCCSSCBHHHHHHHTT-----------TCC
T ss_pred             EEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe-cC-CceEEEEecCCCcHHHHHHhcC-----------CCC
Confidence            6666665545556788999999999999999999999997 43 3678999999999999987632           235


Q ss_pred             ChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          82 LSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        82 ~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       115 ~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~  152 (327)
T 3lzb_A          115 GSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKT  152 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcC
Confidence            55666999999999999999999  999999999999964

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.86  E-value=2.8e-22  Score=134.79  Aligned_cols=105  Identities=26%  Similarity=0.402  Sum_probs=84.3

Q ss_pred             CeeeeccCCC-------CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNL-------NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||+|++....       .......+.+|+.++++++||||+++++++.  .+..+++|||+.+|+|.+++...+      
T Consensus       163 vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~------  234 (419)
T 3i6u_A          163 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNK------  234 (419)
T ss_dssp             EEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--SSEEEEEEECCTTCBGGGGTSSSC------
T ss_pred             EEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCceEEEEEcCCCCcHHHHHhccC------
Confidence            5888887531       1122346789999999999999999999986  345789999999999988776433      


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       235 ------~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~  274 (419)
T 3i6u_A          235 ------RLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSS  274 (419)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESS
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEec
Confidence                  3455566999999999999999999  999999999999963

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2.2e-22  Score=132.70  Aligned_cols=106  Identities=22%  Similarity=0.299  Sum_probs=88.6

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||+++...   .....+.+.+|+.+++.+ +|+||+.+++++. .....+++|||+.+++|.+++.....        
T Consensus        85 vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------  155 (355)
T 1vzo_A           85 YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRER--------  155 (355)
T ss_dssp             EEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHHHHSC--------
T ss_pred             EEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe-eCceEEEEeecCCCCCHHHHHHHcCC--------
Confidence            5888887542   123446677899999999 7999999999998 66788999999999999999876433        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       156 ----~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  194 (355)
T 1vzo_A          156 ----FTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDS  194 (355)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             ----CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECC
Confidence                445556899999999999999999  999999999999975

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.86  E-value=2.3e-21  Score=128.30  Aligned_cols=106  Identities=23%  Similarity=0.382  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCC-------cchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNLNL-------PFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~~~-------~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||||++......       ...+.+.+|+.+++.+ +||||+.+++++. ..+..+++|||+.+++|.+++....     
T Consensus       122 vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~-----  195 (365)
T 2y7j_A          122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE-SSSFMFLVFDLMRKGELFDYLTEKV-----  195 (365)
T ss_dssp             EEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-BSSEEEEEECCCTTCBHHHHHHHHS-----
T ss_pred             EEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe-eCCEEEEEEEeCCCCcHHHHHHhcC-----
Confidence            689988765322       1245678899999999 8999999999998 6788999999999999999987543     


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             .+.+..+..++.|++.|+.|||+.+  ++|+|+||+||+++.
T Consensus       196 -------~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~  235 (365)
T 2y7j_A          196 -------ALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDD  235 (365)
T ss_dssp             -------SCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence                   3445556999999999999999999  999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.86  E-value=2.2e-21  Score=124.94  Aligned_cols=106  Identities=25%  Similarity=0.428  Sum_probs=87.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++... .....+.+.+|+.+++.++||||+.+++++. ..+..++++||+.+++|..++....           ..
T Consensus        47 ~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~-----------~~  113 (302)
T 2j7t_A           47 AAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYY-HDGKLWIMIEFCPGGAVDAIMLELD-----------RG  113 (302)
T ss_dssp             EEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CC-CEEEEEECCTTEEHHHHHHHHT-----------SC
T ss_pred             EEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-eCCeEEEEEEeCCCCcHHHHHHhhc-----------cC
Confidence            578887755 2345678899999999999999999999998 6678899999999999998876521           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~  152 (302)
T 2j7t_A          114 LTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTL  152 (302)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECC
Confidence            556667999999999999999999  999999999999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.86  E-value=2.3e-21  Score=126.28  Aligned_cols=107  Identities=25%  Similarity=0.281  Sum_probs=88.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++... .....+.+.+|+.+++.++|+||+.+++++... ....++++||+++++|.+++....           .
T Consensus        73 vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~  140 (326)
T 2w1i_A           73 VAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-----------E  140 (326)
T ss_dssp             EEEEEESSC-CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHST-----------T
T ss_pred             EEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc-----------c
Confidence            588888765 344567889999999999999999999988622 346889999999999999997642           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       141 ~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~  180 (326)
T 2w1i_A          141 RIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVEN  180 (326)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcC
Confidence            3555666999999999999999999  999999999999974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.86  E-value=3.6e-21  Score=123.20  Aligned_cols=107  Identities=22%  Similarity=0.362  Sum_probs=87.3

Q ss_pred             CeeeeccCCCCCc------chHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLP------FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|++.......      ..+.+.+|+.+++.++||||+++++++. +..  +++|||+.+++|.+.+....       
T Consensus        47 vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~--~lv~e~~~~~~L~~~l~~~~-------  116 (287)
T 4f0f_A           47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH-NPP--RMVMEFVPCGDLYHRLLDKA-------  116 (287)
T ss_dssp             EEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET-TTT--EEEEECCTTCBHHHHHHCTT-------
T ss_pred             EEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec-CCC--eEEEEecCCCCHHHHHhccc-------
Confidence            5889887653222      1267889999999999999999999987 433  58999999999988876432       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.|+.|||+.+++++|+||||+||+++.
T Consensus       117 ----~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~  159 (287)
T 4f0f_A          117 ----HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQS  159 (287)
T ss_dssp             ----SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESC
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEec
Confidence                2455666799999999999999998777999999999999964

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.86  E-value=1.4e-21  Score=127.46  Aligned_cols=103  Identities=20%  Similarity=0.223  Sum_probs=88.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++....   ..+.+.+|+.+++.+ +|+||+.+++++. ..+..+++|||+ +++|.+++....           .
T Consensus        37 vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~-----------~  100 (330)
T 2izr_A           37 VAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGP-CGKYNAMVLELL-GPSLEDLFDLCD-----------R  100 (330)
T ss_dssp             EEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTT-----------T
T ss_pred             EEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEe-cCCccEEEEEeC-CCCHHHHHHHcC-----------C
Confidence            6889887552   235688999999999 9999999999998 678889999999 799999987531           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       101 ~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~  140 (330)
T 2izr_A          101 TFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGR  140 (330)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecc
Confidence            4556667999999999999999999  999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.86  E-value=1.1e-21  Score=127.49  Aligned_cols=105  Identities=26%  Similarity=0.400  Sum_probs=83.7

Q ss_pred             CeeeeccCCC-------CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNL-------NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||||++....       .......+.+|+.+++.++||||+.+++++. ... .++++||+.+++|.+++.....     
T Consensus        38 vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~-~~lv~e~~~~~~L~~~~~~~~~-----  110 (322)
T 2ycf_A           38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED-YYIVLELMEGGELFDKVVGNKR-----  110 (322)
T ss_dssp             EEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE-SSS-EEEEEECCTTEETHHHHSTTCC-----
T ss_pred             EEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc-CCc-eEEEEecCCCCcHHHHHhccCC-----
Confidence            5889887542       1123456789999999999999999999987 433 7899999999999988865433     


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                             +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       111 -------~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~  149 (322)
T 2ycf_A          111 -------LKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSS  149 (322)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESS
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEec
Confidence                   445556899999999999999999  999999999999964

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.86  E-value=2.8e-21  Score=123.98  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+.... ....+.+.+|+.+++.++||||+.+++++. ..+..++++||+++++|.+++.....         ...
T Consensus        50 vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~  118 (295)
T 2clq_A           50 IAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFS-ENGFIKIFMEQVPGGSLSALLRSKWG---------PLK  118 (295)
T ss_dssp             EEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCSEEEHHHHHHHTTC---------CCT
T ss_pred             EEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-eCCcEEEEEEeCCCCCHHHHHHhhcc---------CCC
Confidence            5788887652 345678899999999999999999999998 67788999999999999999875321         123


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       119 ~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  157 (295)
T 2clq_A          119 DNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINT  157 (295)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEEC
Confidence            445666889999999999999999  999999999999974

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.86  E-value=7.7e-22  Score=128.79  Aligned_cols=106  Identities=21%  Similarity=0.282  Sum_probs=87.9

Q ss_pred             CeeeeccCCCCC-cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNL-PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++...... ...+.+.+|+.+++.++||||+.+++++. +.+..+++|||+.+++|..+.....            
T Consensus        53 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~------------  119 (331)
T 4aaa_A           53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-KKKRWYLVFEFVDHTILDDLELFPN------------  119 (331)
T ss_dssp             EEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHHSTT------------
T ss_pred             EEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-cCCEEEEEEecCCcchHHHHHhhcc------------
Confidence            588888665322 23466789999999999999999999998 7788899999999888877655433            


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       120 ~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~  159 (331)
T 4aaa_A          120 GLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQ  159 (331)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcC
Confidence            3455566999999999999999999  999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.86  E-value=4.1e-22  Score=129.86  Aligned_cols=106  Identities=29%  Similarity=0.415  Sum_probs=85.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++...........+.+|+.+++.++||||+.+++++. +.+..+++|||+. |+|.+++...+           ..
T Consensus        30 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~-----------~~   96 (324)
T 3mtl_A           30 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-TEKSLTLVFEYLD-KDLKQYLDDCG-----------NI   96 (324)
T ss_dssp             EEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-CSSCEEEEEECCS-EEHHHHHHHTT-----------TC
T ss_pred             EEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-eCCEEEEEecccc-cCHHHHHHhcC-----------CC
Confidence            58898876543334445668999999999999999999998 7778899999998 69988887532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        97 ~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~  135 (324)
T 3mtl_A           97 INMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINE  135 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECC
Confidence            455666899999999999999999  999999999999974

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.86  E-value=1.5e-21  Score=124.53  Aligned_cols=105  Identities=25%  Similarity=0.341  Sum_probs=88.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...  ....+.+.+|+++++.++||||+++++++.  .+..++++||+.+++|.+++.....          ..
T Consensus        40 vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~----------~~  105 (279)
T 1qpc_A           40 VAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSG----------IK  105 (279)
T ss_dssp             EEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHHH----------HT
T ss_pred             EEEEEecCC--cccHHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEEecCCCCCHHHHHhcCCC----------CC
Confidence            588888765  234678899999999999999999999886  3457899999999999998864321          13


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       106 ~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~  144 (279)
T 1qpc_A          106 LTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD  144 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcC
Confidence            455667999999999999999999  999999999999975

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.86  E-value=1.1e-21  Score=129.08  Aligned_cols=106  Identities=21%  Similarity=0.331  Sum_probs=88.1

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++......  ...+.+.+|+.++++++||||+.+++++. +.+..+++|||+. |++.+++....           
T Consensus        82 vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~-g~l~~~l~~~~-----------  148 (348)
T 1u5q_A           82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCL-GSASDLLEVHK-----------  148 (348)
T ss_dssp             EEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHHHT-----------
T ss_pred             EEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-ECCeEEEEEecCC-CCHHHHHHHhc-----------
Confidence            588988755222  23467889999999999999999999998 6778899999998 78887775421           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       149 ~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  189 (348)
T 1u5q_A          149 KPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSE  189 (348)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEET
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECC
Confidence            24556667999999999999999999  999999999999975

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.86  E-value=2.7e-21  Score=125.20  Aligned_cols=113  Identities=17%  Similarity=0.198  Sum_probs=88.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|.++... .....+.+.+|+.++++++||||+++++++.....    ..++++||+.+++|.+++.....      .
T Consensus        65 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~------~  138 (313)
T 3brb_A           65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL------E  138 (313)
T ss_dssp             EEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTB------T
T ss_pred             EEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhh------h
Confidence            5788887653 23345778899999999999999999999972222    45899999999999999864321      0


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       139 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~  182 (313)
T 3brb_A          139 TGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRD  182 (313)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECT
T ss_pred             cCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcC
Confidence            11245677788999999999999999999  999999999999975

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.86  E-value=2.4e-23  Score=136.14  Aligned_cols=106  Identities=21%  Similarity=0.203  Sum_probs=80.5

Q ss_pred             CeeeeccCCC-------CCcchHHHHHHHHHHhhCC---------CCCccceeee-----------------eee-----
Q psy4991           1 MCAKLLTTNL-------NLPFPRHALREYNIHKALD---------HPRVVKLYDV-----------------FEI-----   42 (122)
Q Consensus         1 vavK~~~~~~-------~~~~~~~~~~e~~~l~~~~---------h~~i~~~~~~-----------------~~~-----   42 (122)
                      ||||++....       .....+.+.+|+.+++.++         |+|++.+.++                 +..     
T Consensus        46 vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~  125 (336)
T 2vuw_A           46 VAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSA  125 (336)
T ss_dssp             EEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCS
T ss_pred             EEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhcccc
Confidence            6899998652       2234478899999998886         5555555544                 431     


Q ss_pred             -------CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHH-cCCCCeeeeCCCC
Q psy4991          43 -------DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLN-EIKPPVIHYDLKP  114 (122)
Q Consensus        43 -------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~~~i~h~dlk~  114 (122)
                             +.+..++||||+.+|++...+..             ..+.+..++.++.|++.|+.||| +.+  ++||||||
T Consensus       126 ~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivHrDlKp  190 (336)
T 2vuw_A          126 NDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------------KLSSLATAKSILHQLTASLAVAEASLR--FEHRDLHW  190 (336)
T ss_dssp             SCCSCCCCTTCEEEEEEEECCCEETGGGTT-------------TCCCHHHHHHHHHHHHHHHHHHHHHHC--CBCSCCCG
T ss_pred             ccCccccccCeEEEEEEecCCCccHHHHHh-------------cCCCHHHHHHHHHHHHHHHHHHHHhCC--EeECCCCH
Confidence                   26789999999998876554432             23456677999999999999999 889  99999999


Q ss_pred             CCccccc
Q psy4991         115 GKPLFLF  121 (122)
Q Consensus       115 ~nill~~  121 (122)
                      +|||++.
T Consensus       191 ~NILl~~  197 (336)
T 2vuw_A          191 GNVLLKK  197 (336)
T ss_dssp             GGEEEEE
T ss_pred             HHEEEec
Confidence            9999975

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.86  E-value=8.7e-22  Score=125.65  Aligned_cols=106  Identities=21%  Similarity=0.274  Sum_probs=86.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++..   ...+.+.+|+.+++.++||||+++++++....+..++++||+.+++|.+++.....          ..
T Consensus        47 vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----------~~  113 (278)
T 1byg_A           47 VAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SV  113 (278)
T ss_dssp             EEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH----------HH
T ss_pred             EEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc----------cc
Confidence            588888754   24578899999999999999999999976455678899999999999999875422          12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~  152 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSE  152 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeC
Confidence            344556899999999999999999  999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.86  E-value=4.3e-21  Score=123.36  Aligned_cols=106  Identities=23%  Similarity=0.383  Sum_probs=88.7

Q ss_pred             CeeeeccCCCCC--------cchHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH
Q psy4991           1 MCAKLLTTNLNL--------PFPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE   71 (122)
Q Consensus         1 vavK~~~~~~~~--------~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   71 (122)
                      ||+|++......        ...+.+.+|+.+++++. ||||+++++++. ..+..++++||+.+++|.+++.....   
T Consensus        45 vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---  120 (298)
T 1phk_A           45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVT---  120 (298)
T ss_dssp             EEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSS---
T ss_pred             EEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec-cCCeEEEEEeccCCCcHHHHHhccCC---
Confidence            588888755211        13466789999999995 999999999998 77889999999999999999876433   


Q ss_pred             HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       121 ---------~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~  159 (298)
T 1phk_A          121 ---------LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDD  159 (298)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcC
Confidence                     445556999999999999999999  999999999999974

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.86  E-value=3.1e-21  Score=124.76  Aligned_cols=110  Identities=25%  Similarity=0.383  Sum_probs=91.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++....  .....+.+.+|+.+++.++|+||+.+++++. ..+..++++||+.+++|.+++.....        ..
T Consensus        60 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~  130 (310)
T 2wqm_A           60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKK--------QK  130 (310)
T ss_dssp             EEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCCSCBHHHHHHHHHH--------TT
T ss_pred             EEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCCcEEEEEecCCCCCHHHHHHHhcc--------cc
Confidence            5888887542  2335577889999999999999999999998 67788999999999999998875211        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       131 ~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~  171 (310)
T 2wqm_A          131 RLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITA  171 (310)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcC
Confidence            34566777999999999999999999  999999999999974

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.86  E-value=2.8e-21  Score=127.30  Aligned_cols=105  Identities=22%  Similarity=0.336  Sum_probs=88.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-----CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-----HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++..  ....+.+..|+.+++.+.     |+||+.+++++. ..+..+++|||+ +++|.+++.....       
T Consensus        63 vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~-------  131 (360)
T 3llt_A           63 YAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM-YYDHMCLIFEPL-GPSLYEIITRNNY-------  131 (360)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE-ETTEEEEEECCC-CCBHHHHHHHTTT-------
T ss_pred             EEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee-ECCeeEEEEcCC-CCCHHHHHHhcCC-------
Confidence            588888743  334566788999999986     999999999998 678899999999 7999999876432       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       132 ---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~  172 (360)
T 3llt_A          132 ---NGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDD  172 (360)
T ss_dssp             ---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESC
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEcc
Confidence               23556667999999999999999999  999999999999963

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.86  E-value=1.8e-21  Score=130.16  Aligned_cols=103  Identities=27%  Similarity=0.447  Sum_probs=83.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhh-CCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKA-LDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||++...      ..+.+|+.++.+ .+|+||+.+++++..   +...+++||||+.+|+|.+++.....        
T Consensus        90 vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--------  155 (400)
T 1nxk_A           90 FALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--------  155 (400)
T ss_dssp             EEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC----------
T ss_pred             EEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC--------
Confidence            578887632      567788888754 589999999999862   24578999999999999999975321        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       156 --~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~  196 (400)
T 1nxk_A          156 --QAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTS  196 (400)
T ss_dssp             ---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESS
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEec
Confidence              23566677999999999999999999  999999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.85  E-value=2.2e-21  Score=125.75  Aligned_cols=110  Identities=16%  Similarity=0.179  Sum_probs=90.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++... .....+.+.+|+.+++.++||||+++++++..   .....++++||+.+++|.+++.....        .
T Consensus        57 vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~  127 (317)
T 2buj_A           57 YALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD--------K  127 (317)
T ss_dssp             EEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHT--------T
T ss_pred             EEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHh--------c
Confidence            588887654 23456778899999999999999999999852   23478899999999999999875211        1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       128 ~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~  169 (317)
T 2buj_A          128 GNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGD  169 (317)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcC
Confidence            235667777999999999999999999  999999999999964

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.85  E-value=2.1e-21  Score=124.70  Aligned_cols=106  Identities=21%  Similarity=0.283  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC------------CCeEEEEEeccCCCCHHHHHHhccc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID------------ANSFCTVLEYCDGHDLDFYLKQHKT   68 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------------~~~~~lv~e~~~~~~L~~~l~~~~~   68 (122)
                      ||+|.+...  ....+.+.+|+.+++.++||||+.+++++...            .+..++++||+++++|.+++.....
T Consensus        34 vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  111 (303)
T 1zy4_A           34 YAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL  111 (303)
T ss_dssp             EEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCG
T ss_pred             EEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcccc
Confidence            578887643  33457788999999999999999999988522            3568899999999999999975321


Q ss_pred             hhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          69 IAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                 .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       112 -----------~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~  151 (303)
T 1zy4_A          112 -----------NQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDE  151 (303)
T ss_dssp             -----------GGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             -----------ccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcC
Confidence                       2334455899999999999999999  999999999999974

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.85  E-value=4.3e-21  Score=122.94  Aligned_cols=106  Identities=25%  Similarity=0.326  Sum_probs=84.8

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|+++...  .....+.+.+|+.+++.++||||+++++++. .. ..++++||+.+++|.+++....           
T Consensus        49 vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~-~~~~v~e~~~~~~L~~~l~~~~-----------  115 (291)
T 1u46_A           49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TP-PMKMVTELAPLGSLLDRLRKHQ-----------  115 (291)
T ss_dssp             EEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS-SCEEEEECCTTCBHHHHHHHHG-----------
T ss_pred             EEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc-cC-CceeeEecccCCCHHHHHHhcc-----------
Confidence            4788887652  2345678899999999999999999999997 33 3779999999999999987532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       116 ~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~  156 (291)
T 1u46_A          116 GHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLAT  156 (291)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEE
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcC
Confidence            12445566999999999999999999  999999999999964

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.85  E-value=2.6e-21  Score=136.20  Aligned_cols=106  Identities=24%  Similarity=0.312  Sum_probs=88.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++........+.+.+|+.+++.++||||+++++++. + +..+++|||+.+|+|.+++....           ..
T Consensus       421 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~-~~~~lv~E~~~~g~L~~~l~~~~-----------~~  487 (656)
T 2j0j_A          421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E-NPVWIIMELCTLGELRSFLQVRK-----------FS  487 (656)
T ss_dssp             EEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEEECCTTCBHHHHHHHTT-----------TT
T ss_pred             EEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c-CceEEEEEcCCCCcHHHHHHhcc-----------CC
Confidence            47787776544445678899999999999999999999985 3 45789999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       488 l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~  526 (656)
T 2j0j_A          488 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSS  526 (656)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeC
Confidence            455666899999999999999999  999999999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.85  E-value=4.5e-21  Score=123.32  Aligned_cols=107  Identities=27%  Similarity=0.439  Sum_probs=86.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++.... .....+.+.+|+.++++++||||+++++++. ..+..++++||+. ++|.+++.....          .
T Consensus        31 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~~----------~   98 (299)
T 2r3i_A           31 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLH-QDLKKFMDASAL----------T   98 (299)
T ss_dssp             EEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHHTTT----------T
T ss_pred             EEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-cCCceEEEEEccc-CCHHHHHHhhhc----------c
Confidence            5888887652 3334578889999999999999999999998 6778899999998 799988875421          2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus        99 ~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~  138 (299)
T 2r3i_A           99 GIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINT  138 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcC
Confidence            3556667899999999999999999  999999999999975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.85  E-value=3.2e-21  Score=122.52  Aligned_cols=107  Identities=22%  Similarity=0.362  Sum_probs=84.4

Q ss_pred             CeeeeccCCCC---CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNLN---LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++.....   ....+.+.+|+.+++.++||||+++++++. +.+..+++|||+.+++|.+++..            
T Consensus        33 vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~------------   99 (271)
T 3dtc_A           33 VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-KEPNLCLVMEFARGGPLNRVLSG------------   99 (271)
T ss_dssp             EEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-CC--CEEEEECCTTEEHHHHHTS------------
T ss_pred             EEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-cCCceEEEEEcCCCCCHHHHhhc------------
Confidence            58888876522   234577889999999999999999999998 66778999999999999888752            


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCC-CeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKP-PVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~-~i~h~dlk~~nill~~  121 (122)
                       ..+.+..++.++.|++.|+.|||+.+. +++|+||||+||+++.
T Consensus       100 -~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~  143 (271)
T 3dtc_A          100 -KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ  143 (271)
T ss_dssp             -SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEec
Confidence             235556669999999999999999863 3889999999999964

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.85  E-value=6.1e-21  Score=123.01  Aligned_cols=103  Identities=28%  Similarity=0.476  Sum_probs=85.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHH-hhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIH-KALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|+++..      ..+.+|+.++ +..+||||+++++++..   .....+++|||+.+++|.+++.....        
T Consensus        46 vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------  111 (299)
T 3m2w_A           46 FALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--------  111 (299)
T ss_dssp             EEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT--------
T ss_pred             EEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC--------
Confidence            578887632      5677888887 55699999999999862   25678999999999999999986431        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       112 --~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  152 (299)
T 3m2w_A          112 --QAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTS  152 (299)
T ss_dssp             --CCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESS
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEec
Confidence              24566677999999999999999999  999999999999975

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.85  E-value=5.7e-21  Score=121.92  Aligned_cols=104  Identities=21%  Similarity=0.366  Sum_probs=85.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee---------------CCCeEEEEEeccCCCCHHHHHHh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI---------------DANSFCTVLEYCDGHDLDFYLKQ   65 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------------~~~~~~lv~e~~~~~~L~~~l~~   65 (122)
                      ||+|.++..     .+.+.+|+.+++.++||||+.+++++..               .....+++|||+++++|.+++..
T Consensus        39 vavK~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (284)
T 2a19_B           39 YVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK  113 (284)
T ss_dssp             EEEEEEECC-----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEeccc-----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhh
Confidence            578877654     2457789999999999999999998852               13457899999999999999975


Q ss_pred             ccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          66 HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...          ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       114 ~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~  157 (284)
T 2a19_B          114 RRG----------EKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVD  157 (284)
T ss_dssp             GGG----------SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEE
T ss_pred             ccC----------CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcC
Confidence            321          34556667999999999999999999  999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.85  E-value=2.3e-21  Score=127.18  Aligned_cols=105  Identities=20%  Similarity=0.260  Sum_probs=87.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCC--CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDH--PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++.... .....+.+.+|+.++..++|  +||+.+++++. +.+..+++||+ .+++|.+++.....         
T Consensus        36 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e~-~~~~L~~~l~~~~~---------  104 (343)
T 3dbq_A           36 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVMEC-GNIDLNSWLKKKKS---------  104 (343)
T ss_dssp             EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECC-CSEEHHHHHHHSCC---------
T ss_pred             EEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-eCCEEEEEEeC-CCCCHHHHHHhcCC---------
Confidence            5889887653 22345778899999999976  99999999998 77889999995 56899999986543         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       105 ---~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~~  143 (343)
T 3dbq_A          105 ---IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD  143 (343)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEEC
Confidence               344555899999999999999999  999999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.85  E-value=4.4e-21  Score=126.73  Aligned_cols=105  Identities=22%  Similarity=0.346  Sum_probs=87.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|++.........+.+.+|+.++++++||||+.+++++....    ...++++|++. ++|.+++...          
T Consensus        55 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~----------  123 (364)
T 3qyz_A           55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----------  123 (364)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC----------
T ss_pred             EEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC----------
Confidence            58998886544445678899999999999999999999986222    46889999998 6998888642          


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       124 ---~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~  163 (364)
T 3qyz_A          124 ---HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNT  163 (364)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECC
Confidence               3455566999999999999999999  999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=2.5e-21  Score=128.20  Aligned_cols=105  Identities=30%  Similarity=0.468  Sum_probs=86.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||.+.... +....+.+.+|+.+++.++||||+.+++++....     ...+++|||+ +++|.+++.. .       
T Consensus        53 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~-------  123 (367)
T 1cm8_A           53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-E-------  123 (367)
T ss_dssp             EEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-C-------
T ss_pred             EEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-C-------
Confidence            6899886542 2334577889999999999999999999996222     3468999999 6899998875 2       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       124 -----~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~  163 (367)
T 1cm8_A          124 -----KLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNE  163 (367)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcC
Confidence                 2445566899999999999999999  999999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=5.2e-21  Score=127.29  Aligned_cols=105  Identities=23%  Similarity=0.392  Sum_probs=85.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCC-CCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALD-HPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||.+.... .....+.+.+|+.+++.+. |+||+.+++++.. +...+++||||+. ++|..++...           
T Consensus        37 vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----------  104 (388)
T 3oz6_A           37 VAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN-----------  104 (388)
T ss_dssp             EEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT-----------
T ss_pred             EEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC-----------
Confidence            6899887552 3345677889999999996 9999999999963 3346899999998 7898888652           


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       105 --~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~  144 (388)
T 3oz6_A          105 --ILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNA  144 (388)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcC
Confidence              2344455889999999999999999  999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.85  E-value=3.1e-21  Score=128.69  Aligned_cols=105  Identities=21%  Similarity=0.293  Sum_probs=87.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++.... .....+.+.+|+.++..++  |+||+.+++++. ..+.++++|| +.+++|.+++.....         
T Consensus        83 vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~E-~~~~~L~~~l~~~~~---------  151 (390)
T 2zmd_A           83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVME-CGNIDLNSWLKKKKS---------  151 (390)
T ss_dssp             EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEE-CCSEEHHHHHHHCSS---------
T ss_pred             EEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-cCCEEEEEEe-cCCCCHHHHHHhcCC---------
Confidence            5899887653 2335577899999999996  599999999998 6778999999 556899999886443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       152 ---~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~  190 (390)
T 2zmd_A          152 ---IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD  190 (390)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEESS
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEEC
Confidence               344455899999999999999999  999999999999853

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.85  E-value=2.4e-21  Score=124.32  Aligned_cols=106  Identities=18%  Similarity=0.273  Sum_probs=86.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|+++... .....+.+.+|+.+++.++|+||+.+++++.  ....++++||+.+++|.+++....           .
T Consensus        49 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-----------~  115 (289)
T 3og7_A           49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWCEGSSLYHHLHASE-----------T  115 (289)
T ss_dssp             EEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEECCCEEEHHHHHTTC-------------
T ss_pred             eEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEEEEEecCCCcHHHHHhhcc-----------C
Confidence            5888887653 2334577899999999999999999999654  456789999999999998885432           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       116 ~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~  155 (289)
T 3og7_A          116 KFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHE  155 (289)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEET
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECC
Confidence            3455666999999999999999999  999999999999974

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.85  E-value=6.1e-22  Score=139.83  Aligned_cols=105  Identities=23%  Similarity=0.319  Sum_probs=84.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||.+.........+.+.+|+.+++.++||||+++++++.....    ..|+||||+.+++|.+++..           
T Consensus       109 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-----------  177 (681)
T 2pzi_A          109 VVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-----------  177 (681)
T ss_dssp             EEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-----------
T ss_pred             EEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-----------
Confidence            588988765444455678899999999999999999999973332    16899999999999776542           


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+++..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       178 ---~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~  217 (681)
T 2pzi_A          178 ---KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTE  217 (681)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECS
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeC
Confidence               3556667999999999999999999  999999999999975

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.85  E-value=4.5e-21  Score=124.13  Aligned_cols=104  Identities=27%  Similarity=0.443  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...   ...+.+.+|+.++++++||||+++++++. +  ..+++|||+++++|.+++......         ..
T Consensus        34 vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~--~~~lv~e~~~~~~L~~~l~~~~~~---------~~   98 (307)
T 2eva_A           34 VAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL-N--PVCLVMEYAEGGSLYNVLHGAEPL---------PY   98 (307)
T ss_dssp             EEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT-T--TTEEEEECCTTCBHHHHHHCSSSE---------EC
T ss_pred             EEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-C--CcEEEEEcCCCCCHHHHHhccCCC---------Cc
Confidence            578887643   35678899999999999999999999886 3  367999999999999999754321         12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHc---CCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNE---IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~---~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+   .+  ++|+||||+||+++.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~LH~~~~~~--ivH~dlkp~NIll~~  140 (307)
T 2eva_A           99 YTAAHAMSWCLQCSQGVAYLHSMQPKA--LIHRDLKPPNLLLVA  140 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCSSSC--CCCCCCSGGGEEEET
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCCC--eecCCCChhHEEEeC
Confidence            4455668999999999999999   67  999999999999964

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.85  E-value=3.3e-21  Score=125.75  Aligned_cols=108  Identities=22%  Similarity=0.367  Sum_probs=89.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.... .......+.+|+.+++.+ .||||+.+++++. +.+..++++||+.+|+|.+++....          .
T Consensus        57 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~----------~  125 (327)
T 3lm5_A           57 YAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-NTSEIILILEYAAGGEIFSLCLPEL----------A  125 (327)
T ss_dssp             EEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEEECCTTEEGGGGGSSCC-----------
T ss_pred             EEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE-eCCeEEEEEEecCCCcHHHHHHHhc----------c
Confidence            5889887652 333567889999999999 5799999999998 7788999999999999988774321          1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       126 ~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~  166 (327)
T 3lm5_A          126 EMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSS  166 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEec
Confidence            34566677999999999999999999  999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.85  E-value=7.7e-21  Score=123.23  Aligned_cols=106  Identities=18%  Similarity=0.229  Sum_probs=85.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++.... ..........|+..+..+ +|+||+.+++++. +.+..+++|||+. ++|.+.+...+           
T Consensus        85 vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-~~~~~~lv~e~~~-~~L~~~~~~~~-----------  151 (311)
T 3p1a_A           85 YAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-EGGILYLQTELCG-PSLQQHCEAWG-----------  151 (311)
T ss_dssp             EEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCC-CBHHHHHHHHC-----------
T ss_pred             EEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-eCCEEEEEEeccC-CCHHHHHHhcC-----------
Confidence            6899877652 222344556666666555 9999999999998 7788999999994 79988876532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+  ++|+||||+|||++.
T Consensus       152 ~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~  192 (311)
T 3p1a_A          152 ASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGP  192 (311)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECC
Confidence            24666777999999999999999999  999999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.85  E-value=9.3e-21  Score=122.65  Aligned_cols=104  Identities=22%  Similarity=0.407  Sum_probs=89.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.+...   ...+.+.+|+.+++.++||||+.+++++. ..+..++++||+.+++|.+++....           ..
T Consensus        57 vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~  121 (314)
T 3com_A           57 VAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRN-----------KT  121 (314)
T ss_dssp             EEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHHHHT-----------CC
T ss_pred             EEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEE-eCCEEEEEeecCCCCCHHHHHHhcC-----------CC
Confidence            578888754   23577899999999999999999999998 6778899999999999999986421           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||+|+||+++.
T Consensus       122 ~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~  160 (314)
T 3com_A          122 LTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNT  160 (314)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECC
Confidence            556667999999999999999999  999999999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.85  E-value=5.9e-21  Score=127.70  Aligned_cols=110  Identities=25%  Similarity=0.396  Sum_probs=86.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|.+...   .....+.+|+.+++.++||||+.+++++.. .....+++|||+. ++|.+++.........   ....
T Consensus        51 vaiK~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~---~~~~  123 (405)
T 3rgf_A           51 YALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKAN---KKPV  123 (405)
T ss_dssp             EEEEECSSS---SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC---------
T ss_pred             EEEEEECCC---CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhcccccc---cccc
Confidence            588888754   234678899999999999999999999952 4678999999997 7888888653321110   1123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++||||||+|||+
T Consensus       124 ~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll  161 (405)
T 3rgf_A          124 QLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILV  161 (405)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEE
Confidence            4777888999999999999999999  9999999999999

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.85  E-value=8.3e-21  Score=122.09  Aligned_cols=102  Identities=20%  Similarity=0.250  Sum_probs=82.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhh--CCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKA--LDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++...    ....+.+|.+++..  ++||||+++++++..   .....++++||+++|+|.+++..          
T Consensus        34 vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----------   99 (301)
T 3q4u_A           34 VAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----------   99 (301)
T ss_dssp             EEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT----------
T ss_pred             EEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh----------
Confidence            588988654    34566777777776  799999999998742   23568899999999999999853          


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHH--------cCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLN--------EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~~~i~h~dlk~~nill~~  121 (122)
                         ..+.+..++.++.|++.|+.|||        +.+  ++||||||+||+++.
T Consensus       100 ---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~  148 (301)
T 3q4u_A          100 ---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKK  148 (301)
T ss_dssp             ---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECT
T ss_pred             ---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcC
Confidence               23455566999999999999999        778  999999999999974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.85  E-value=7.2e-22  Score=131.04  Aligned_cols=113  Identities=11%  Similarity=0.097  Sum_probs=83.7

Q ss_pred             CeeeeccCCC--CCcchHHHHHHH---HHHhhCCCCCcccee-------eeeeeCCC----------------eEEEEEe
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREY---NIHKALDHPRVVKLY-------DVFEIDAN----------------SFCTVLE   52 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~---~~l~~~~h~~i~~~~-------~~~~~~~~----------------~~~lv~e   52 (122)
                      ||||++....  .....+.+.+|+   ..+++++||||++++       +++...+.                ..+++||
T Consensus       101 vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E  180 (377)
T 3byv_A          101 FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP  180 (377)
T ss_dssp             EEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEE
T ss_pred             EEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEe
Confidence            6899987542  334567888999   455556899999998       44441211                3789999


Q ss_pred             ccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          53 YCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        53 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      |+ +|+|.+++...+.+...     ...+++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       181 ~~-~g~L~~~l~~~~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDikp~NIll~~  241 (377)
T 3byv_A          181 RM-QSNLQTFGEVLLSHSST-----HKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDIVLDQ  241 (377)
T ss_dssp             CC-SEEHHHHHHHHHHTTTT-----THHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             cc-CCCHHHHHHhccccccc-----cccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcC
Confidence            99 58999999865433221     112334556789999999999999999  999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.85  E-value=1.1e-20  Score=122.84  Aligned_cols=107  Identities=21%  Similarity=0.287  Sum_probs=89.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|++...  ....+.+.+|+.+++.+ +||||+.+++++...     ....+++|||+.+++|.+++.....      
T Consensus        52 vaiK~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------  123 (326)
T 2x7f_A           52 AAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG------  123 (326)
T ss_dssp             EEEEEEECC--SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG------
T ss_pred             EEEEEEecC--cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc------
Confidence            588888755  23457889999999998 899999999999732     4678999999999999999976421      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       124 ----~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A          124 ----NTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTE  164 (326)
T ss_dssp             ----GCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECT
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcC
Confidence                24556667999999999999999999  999999999999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.84  E-value=7e-21  Score=125.07  Aligned_cols=107  Identities=25%  Similarity=0.427  Sum_probs=87.2

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|++.... .......+.+|+.+++.++||||+.+++++...       .+..+++|||+. +++...+....     
T Consensus        45 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----  118 (351)
T 3mi9_A           45 VALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL-----  118 (351)
T ss_dssp             EEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTT-----
T ss_pred             EEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhcc-----
Confidence            5889886653 344567888999999999999999999999733       346899999998 57777765421     


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       119 ------~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~  159 (351)
T 3mi9_A          119 ------VKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITR  159 (351)
T ss_dssp             ------SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcC
Confidence                  23566677999999999999999999  999999999999974

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.84  E-value=4e-21  Score=130.69  Aligned_cols=104  Identities=23%  Similarity=0.356  Sum_probs=84.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++.... .....+.+.+|+.+++.++||||+++++++....     ...++||||+. +++.+.+..         
T Consensus        90 vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~-~~l~~~~~~---------  159 (464)
T 3ttj_A           90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM---------  159 (464)
T ss_dssp             EEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS-EEHHHHHTS---------
T ss_pred             EEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCC-CCHHHHHhh---------
Confidence            6899887642 3345677889999999999999999999996222     46799999998 556665532         


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       160 -----~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~  199 (464)
T 3ttj_A          160 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  199 (464)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeC
Confidence                 2445566899999999999999999  999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.84  E-value=7.8e-22  Score=129.27  Aligned_cols=99  Identities=12%  Similarity=0.197  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHH
Q psy4991          16 RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVS   95 (122)
Q Consensus        16 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   95 (122)
                      +.+.+|+.+++.++||||+.+++++. +.+..+++|||+++++|.+++........    .....+.+..++.++.|++.
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~l~~----~~~~~~~~~~~~~i~~qi~~  162 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIIT-NYDEVYIIYEYMENDSILKFDEYFFVLDK----NYTCFIPIQVIKCIIKSVLN  162 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEE-SSSEEEEEEECCTTCBSSEESSSEESSCS----SSCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEe-eCCeEEEEEeccCCCcHHHHHHHhhhhhh----ccccCCCHHHHHHHHHHHHH
Confidence            78899999999999999999999998 77889999999999999877321110000    01235667777999999999


Q ss_pred             HHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          96 ALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        96 ~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                      |+.|||+ .+  ++|+||+|+||+++.
T Consensus       163 ~l~~lH~~~~--i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          163 SFSYIHNEKN--ICHRDVKPSNILMDK  187 (348)
T ss_dssp             HHHHHHHTSC--EECCCCCGGGEEECT
T ss_pred             HHHHHhccCC--EeecCCChHhEEEcC
Confidence            9999999 88  999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.84  E-value=1e-20  Score=124.13  Aligned_cols=105  Identities=24%  Similarity=0.324  Sum_probs=87.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||.+...........+.+|+.+++.++||||+.+++++...    ....++++||+. ++|.+++.. .         
T Consensus        39 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~---------  107 (353)
T 2b9h_A           39 VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-Q---------  107 (353)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-C---------
T ss_pred             EEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh-c---------
Confidence            5899887554444567788999999999999999999988622    267899999998 789888764 2         


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       108 ---~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~  147 (353)
T 2b9h_A          108 ---MLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINS  147 (353)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcC
Confidence               3455566999999999999999999  999999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.84  E-value=4.3e-21  Score=122.36  Aligned_cols=113  Identities=25%  Similarity=0.318  Sum_probs=89.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.... .....+.+.+|+.+++.++||||+++++++. ......++++||+++++|.+++.....        ..
T Consensus        34 vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~  105 (279)
T 2w5a_A           34 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK--------ER  105 (279)
T ss_dssp             EEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHH--------TT
T ss_pred             EEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcc--------cC
Confidence            5788887653 3335577889999999999999999999874 245678999999999999999875321        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCC---CCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIK---PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~---~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+.+   .+++|+||||+||+++.
T Consensus       106 ~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~  151 (279)
T 2w5a_A          106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG  151 (279)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC
Confidence            34667778999999999999999975   34999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=6.1e-21  Score=125.31  Aligned_cols=106  Identities=24%  Similarity=0.437  Sum_probs=84.7

Q ss_pred             CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|++.....    ....+.+.+|+.+++.++||||+.+++++. ..+..++++||+. ++|..++....         
T Consensus        38 vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~---------  106 (346)
T 1ua2_A           38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-HKSNISLVFDFME-TDLEVIIKDNS---------  106 (346)
T ss_dssp             EEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC-CTTCCEEEEECCS-EEHHHHHTTCC---------
T ss_pred             EEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe-eCCceEEEEEcCC-CCHHHHHHhcC---------
Confidence            58888875421    223467889999999999999999999998 6778889999998 58888776432         


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       107 --~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~  147 (346)
T 1ua2_A          107 --LVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDE  147 (346)
T ss_dssp             --SSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             --cCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcC
Confidence              24556667999999999999999999  999999999999975

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.84  E-value=2.9e-20  Score=119.44  Aligned_cols=103  Identities=16%  Similarity=0.170  Sum_probs=87.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++....   ..+.+.+|+..++.+ +|++++.+++++. .....++++||+ +++|.+++...+           .
T Consensus        38 vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~-----------~  101 (298)
T 1csn_A           38 VAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLL-GPSLEDLLDLCG-----------R  101 (298)
T ss_dssp             EEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTT-----------T
T ss_pred             EEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecC-CCceeEEEEEec-CCCHHHHHHHhc-----------c
Confidence            5889886542   335688899999999 8999999999987 778889999999 799999997532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       102 ~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~  141 (298)
T 1csn_A          102 KFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGR  141 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecc
Confidence            3566677999999999999999999  999999999999964

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.84  E-value=4.6e-21  Score=134.69  Aligned_cols=110  Identities=30%  Similarity=0.410  Sum_probs=91.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++.........+.+.+|+.+++.++||||+.+++++..     ..+..+++|||+++|+|.+++.....       
T Consensus        42 VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~-------  114 (676)
T 3qa8_A           42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-------  114 (676)
T ss_dssp             EEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSC-------
T ss_pred             EEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhccc-------
Confidence            588988766555566788999999999999999999998752     25667899999999999999875332       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       115 --~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~  156 (676)
T 3qa8_A          115 --CCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQP  156 (676)
T ss_dssp             --TTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEEC
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeec
Confidence              124566677999999999999999999  999999999999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=2.9e-20  Score=121.48  Aligned_cols=102  Identities=21%  Similarity=0.251  Sum_probs=84.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhh--CCCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKA--LDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||+|++...    ....+.+|.+++..  ++||||+.+++++....   ...++++||+.+|+|.+++...         
T Consensus        68 vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---------  134 (342)
T 1b6c_B           68 VAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---------  134 (342)
T ss_dssp             EEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---------
T ss_pred             EEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc---------
Confidence            588888643    34677889998887  68999999999997333   2789999999999999998642         


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHH--------cCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLN--------EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~~~i~h~dlk~~nill~~  121 (122)
                          .+.+..++.++.|++.|+.|||        +.+  ++|+||||+||+++.
T Consensus       135 ----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          135 ----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKK  182 (342)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECT
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECC
Confidence                2455566999999999999999        777  999999999999975

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=3e-20  Score=121.11  Aligned_cols=102  Identities=21%  Similarity=0.211  Sum_probs=82.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC--CCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL--DHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~--~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++...    ......+|.+++...  +|+||+.+++++....   ...+++|||+.+|+|.+++...         
T Consensus        63 vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---------  129 (337)
T 3mdy_A           63 VAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---------  129 (337)
T ss_dssp             EEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC---------
T ss_pred             EEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc---------
Confidence            588888644    334556666666655  8999999999987332   6789999999999999999642         


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcC--------CCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEI--------KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~~~i~h~dlk~~nill~~  121 (122)
                          .+.+..++.++.|++.|+.|||+.        +  ++||||||+||+++.
T Consensus       130 ----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dikp~Nill~~  177 (337)
T 3mdy_A          130 ----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA--IAHRDLKSKNILVKK  177 (337)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC--EECSCCCGGGEEECT
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--EEecccchHHEEECC
Confidence                345556699999999999999998        7  999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.84  E-value=1.5e-20  Score=123.82  Aligned_cols=107  Identities=21%  Similarity=0.338  Sum_probs=86.4

Q ss_pred             CeeeeccCCCCCc----------chHHHHHHHHHHhhCCCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhc
Q psy4991           1 MCAKLLTTNLNLP----------FPRHALREYNIHKALDHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQH   66 (122)
Q Consensus         1 vavK~~~~~~~~~----------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~   66 (122)
                      ||||.+.......          ..+.+.+|+.+++.++||||+.+++++..    .....+++|||+. |+|.+.+...
T Consensus        49 vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~  127 (362)
T 3pg1_A           49 VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ  127 (362)
T ss_dssp             EEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT
T ss_pred             EEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc
Confidence            5888887542221          13778999999999999999999999842    2346899999998 7888887642


Q ss_pred             cchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          67 KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .           ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       128 ~-----------~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~  169 (362)
T 3pg1_A          128 R-----------IVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLAD  169 (362)
T ss_dssp             T-----------SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             c-----------cCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcC
Confidence            2           24556677999999999999999999  999999999999974

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.84  E-value=7.6e-21  Score=128.30  Aligned_cols=108  Identities=25%  Similarity=0.337  Sum_probs=82.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+...    ..+.+.+|+.+++.+ +||||+++++++. +.+..++++||+. |+|.+++...........     
T Consensus        42 vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~-----  110 (434)
T 2rio_A           42 VAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSET-TDRFLYIALELCN-LNLQDLVESKNVSDENLK-----  110 (434)
T ss_dssp             EEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE-CSSEEEEEECCCS-EEHHHHHHTC-------------
T ss_pred             EEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEe-cCCeEEEEEecCC-CCHHHHHhccCCCchhhh-----
Confidence            588887643    345678999999876 8999999999998 7788999999996 799999986433211100     


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ...+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       111 ~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~  150 (434)
T 2rio_A          111 LQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVST  150 (434)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEC
T ss_pred             hccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEec
Confidence            1122234789999999999999999  999999999999964

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.84  E-value=3.8e-21  Score=126.47  Aligned_cols=102  Identities=17%  Similarity=0.147  Sum_probs=84.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccc---------------eeeeeeeCCCeEEEEEeccCCCCHHHHHHh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVK---------------LYDVFEIDANSFCTVLEYCDGHDLDFYLKQ   65 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~---------------~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   65 (122)
                      ||+|++...      +.+.+|+.+++.++||||++               +++++..+.+..+++|||+ +++|.+++..
T Consensus        78 vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  150 (352)
T 2jii_A           78 FSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDV  150 (352)
T ss_dssp             EEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHH
T ss_pred             EEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHh
Confidence            577877644      46889999999999999887               5566654577899999999 8999999986


Q ss_pred             ccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          66 HKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..          ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       151 ~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          151 SP----------KHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAENIFVDP  194 (352)
T ss_dssp             SG----------GGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGGEEEET
T ss_pred             CC----------cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEEcC
Confidence            41          124566677999999999999999999  999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.83  E-value=2.6e-20  Score=121.25  Aligned_cols=100  Identities=20%  Similarity=0.337  Sum_probs=84.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeeeeC-CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFEID-ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++...    ..+.+.+|+.+++.++ |+||+.+++++... ....+++|||+.+++|.+++..             
T Consensus        64 vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-------------  126 (330)
T 3nsz_A           64 VVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-------------  126 (330)
T ss_dssp             EEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG-------------
T ss_pred             EEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh-------------
Confidence            588888743    3577899999999996 99999999999732 5678899999999999887642             


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        +.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       127 --~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~  165 (330)
T 3nsz_A          127 --LTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDH  165 (330)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcC
Confidence              344455899999999999999999  999999999999974

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.83  E-value=1.5e-20  Score=124.56  Aligned_cols=104  Identities=23%  Similarity=0.354  Sum_probs=84.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++.... .....+.+.+|+.+++.++||||+.+++++....     ...+++|||+. ++|.+.+..         
T Consensus        53 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------  122 (371)
T 2xrw_A           53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM---------  122 (371)
T ss_dssp             EEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHHS---------
T ss_pred             EEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHhh---------
Confidence            5889887652 2334567889999999999999999999996232     37899999998 678777752         


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       123 -----~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~  162 (371)
T 2xrw_A          123 -----ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  162 (371)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             -----ccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcC
Confidence                 2345556899999999999999999  999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.83  E-value=9.5e-21  Score=127.85  Aligned_cols=101  Identities=24%  Similarity=0.371  Sum_probs=83.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||.+...    ....+.+|+.+++.+ +||||+++++++. +....+++||++. |+|.+++.....           
T Consensus        51 vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~E~~~-g~L~~~l~~~~~-----------  113 (432)
T 3p23_A           51 VAVKRILPE----CFSFADREVQLLRESDEHPNVIRYFCTEK-DRQFQYIAIELCA-ATLQEYVEQKDF-----------  113 (432)
T ss_dssp             EEEEEECTT----TEEECHHHHHHHHHSCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHSSSC-----------
T ss_pred             EEEEEECHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEe-cCCEEEEEEECCC-CCHHHHHHhcCC-----------
Confidence            689988654    224467899999999 8999999999998 7788899999997 799999875321           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ...+...+.++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       114 ~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~  152 (432)
T 3p23_A          114 AHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILIS  152 (432)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEEC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEe
Confidence            1222334789999999999999999  99999999999994

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.83  E-value=1.6e-20  Score=121.08  Aligned_cols=108  Identities=23%  Similarity=0.376  Sum_probs=85.0

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhCCCCCccceeeeee-eCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKALDHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|+++...   .....+.+.+|+.+++.++|+||+.+++++. .+....+++|||+.++ +.+++....         
T Consensus        33 ~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~---------  102 (305)
T 2wtk_C           33 RAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP---------  102 (305)
T ss_dssp             EEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHST---------
T ss_pred             EEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCc---------
Confidence            4788876541   1334577899999999999999999999984 2456789999999854 777766422         


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       ...+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       103 -~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~  144 (305)
T 2wtk_C          103 -EKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTT  144 (305)
T ss_dssp             -TCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             -ccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcC
Confidence             134566677999999999999999999  999999999999964

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.83  E-value=1.4e-21  Score=126.66  Aligned_cols=107  Identities=19%  Similarity=0.261  Sum_probs=89.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +|+|+++... .....+.+.+|+.++++++|+||+.+++++. +.+..++++||+.+++|.+++...+           .
T Consensus        58 ~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~-----------~  125 (319)
T 2y4i_B           58 VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAK-----------I  125 (319)
T ss_dssp             EEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-CSSCEEEECBCCCSEEHHHHTTSSC-----------C
T ss_pred             EEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-cCCceEEEeecccCCcHHHHHHhcC-----------C
Confidence            5788887552 3334567788999999999999999999998 6677899999999999999886532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       126 ~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~~  165 (319)
T 2y4i_B          126 VLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYDN  165 (319)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEeC
Confidence            4556677999999999999999999  999999999999863

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.83  E-value=3.4e-20  Score=119.83  Aligned_cols=108  Identities=26%  Similarity=0.400  Sum_probs=85.7

Q ss_pred             CeeeeccCCC----CCcchHHHHHHHHHHhhC---CCCCccceeeeeeeCCC----eEEEEEeccCCCCHHHHHHhccch
Q psy4991           1 MCAKLLTTNL----NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDAN----SFCTVLEYCDGHDLDFYLKQHKTI   69 (122)
Q Consensus         1 vavK~~~~~~----~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~   69 (122)
                      ||+|++....    .......+.+|+.+++.+   +||||+++++++.....    ..++++|++. ++|.+++..... 
T Consensus        37 vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-  114 (308)
T 3g33_A           37 VALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP-  114 (308)
T ss_dssp             EEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT-
T ss_pred             EEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC-
Confidence            5889887432    223456777888888776   49999999999973332    5789999998 799999876432 


Q ss_pred             hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       115 ---------~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~  155 (308)
T 3g33_A          115 ---------PGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTS  155 (308)
T ss_dssp             ---------TCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECT
T ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcC
Confidence                     23566677999999999999999999  999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.83  E-value=2.2e-20  Score=120.85  Aligned_cols=103  Identities=34%  Similarity=0.551  Sum_probs=85.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeee-------------eCCCeEEEEEeccCCCCHHHHHHhcc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-------------IDANSFCTVLEYCDGHDLDFYLKQHK   67 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~l~~~~   67 (122)
                      ||+|.+... +....+.+.+|+.+++.++||||+.+++++.             ......++++||+. |+|.+++.. +
T Consensus        39 vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~  115 (320)
T 2i6l_A           39 VAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-G  115 (320)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-C
T ss_pred             EEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-C
Confidence            588887654 2335577889999999999999999998873             13467899999998 799888853 2


Q ss_pred             chhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                                  .+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       116 ------------~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~  154 (320)
T 2i6l_A          116 ------------PLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFIN  154 (320)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEE
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEc
Confidence                        3455566899999999999999999  99999999999996

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.83  E-value=1.8e-20  Score=121.98  Aligned_cols=110  Identities=26%  Similarity=0.378  Sum_probs=88.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CCCccceeeeee-------eCCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HPRVVKLYDVFE-------IDANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|.+... .....+.+.+|+.++.++. ||||+++++++.       .....+++++||+. |+|.+++.....    
T Consensus        56 vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~----  129 (337)
T 3ll6_A           56 YALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMES----  129 (337)
T ss_dssp             EEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHT----
T ss_pred             EEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhc----
Confidence            588887654 2334567889999999995 999999999983       24456889999997 899888865211    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           ...+.+..++.++.|++.|+.|||+.+++++|+||||+||+++.
T Consensus       130 -----~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~  173 (337)
T 3ll6_A          130 -----RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN  173 (337)
T ss_dssp             -----TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECT
T ss_pred             -----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECC
Confidence                 13466677799999999999999998777999999999999975

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.83  E-value=6.6e-21  Score=125.10  Aligned_cols=106  Identities=17%  Similarity=0.221  Sum_probs=84.8

Q ss_pred             CeeeeccCCCCC----------cchHHHHHHHHHHhhCCCCCccceeeeeeeC---CCeEEEEEeccCCCCHHHHHHhcc
Q psy4991           1 MCAKLLTTNLNL----------PFPRHALREYNIHKALDHPRVVKLYDVFEID---ANSFCTVLEYCDGHDLDFYLKQHK   67 (122)
Q Consensus         1 vavK~~~~~~~~----------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~   67 (122)
                      +|+|+.......          .....+.+|+..+..++|+||+.+++++...   ....+++|||+ +++|.+++...+
T Consensus        68 ~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~  146 (345)
T 2v62_A           68 HVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG  146 (345)
T ss_dssp             EEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG
T ss_pred             EEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC
Confidence            467777654211          0234466788889999999999999998732   67899999999 899999887543


Q ss_pred             chhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                                  .+.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       147 ------------~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          147 ------------TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGY  186 (345)
T ss_dssp             ------------BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEES
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEcc
Confidence                        3445566999999999999999999  999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.82  E-value=1.3e-20  Score=124.88  Aligned_cols=105  Identities=26%  Similarity=0.406  Sum_probs=82.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++.... +....+.+.+|+.+++.++||||+.+++++...     ....++++|++ +++|.+++.. .       
T Consensus        57 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~-------  127 (367)
T 2fst_X           57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-Q-------  127 (367)
T ss_dssp             EEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------C-------
T ss_pred             EEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-C-------
Confidence            6899887652 233557788999999999999999999998622     24578999999 5899887764 2       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       128 -----~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~  167 (367)
T 2fst_X          128 -----KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNE  167 (367)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECC
Confidence                 3455666999999999999999999  999999999999975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.82  E-value=2.8e-20  Score=119.10  Aligned_cols=109  Identities=24%  Similarity=0.283  Sum_probs=82.9

Q ss_pred             CeeeeccCCCCCcchHHH-HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHA-LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~-~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++............ .++...++.++||||+.+++++. +.+..++++||++ |+|.+++.....        ...
T Consensus        35 vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~--------~~~  104 (290)
T 3fme_A           35 MAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-REGDVWICMELMD-TSLDKFYKQVID--------KGQ  104 (290)
T ss_dssp             EEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSSEEEEEECCS-EEHHHHHHHHHH--------TTC
T ss_pred             EEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-ccCCEEEEEehhc-cchHHHHHHHHh--------cCC
Confidence            588988766333333333 34444577789999999999998 6778899999998 688877764211        123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      .+++..++.++.|++.|+.|||+. +  ++|+||||+||+++.
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~  145 (290)
T 3fme_A          105 TIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINA  145 (290)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECC
Confidence            566777799999999999999997 8  999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.82  E-value=3.2e-20  Score=120.82  Aligned_cols=105  Identities=24%  Similarity=0.419  Sum_probs=86.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCC------CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHP------RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~------~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|+++..  ....+.+.+|+.+++.++|+      +++.+++++. ..+..+++|||+ +++|.+++...+.      
T Consensus        43 vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~l~~~l~~~~~------  112 (339)
T 1z57_A           43 VAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE-HHGHICIVFELL-GLSTYDFIKENGF------  112 (339)
T ss_dssp             EEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHTTT------
T ss_pred             EEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc-cCCcEEEEEcCC-CCCHHHHHHhcCC------
Confidence            588888754  33457788899999888655      4899999998 677899999999 6999998876432      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          .++.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       113 ----~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~  153 (339)
T 1z57_A          113 ----LPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQ  153 (339)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESC
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEec
Confidence                23556667999999999999999999  999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.82  E-value=5.4e-20  Score=124.02  Aligned_cols=105  Identities=25%  Similarity=0.382  Sum_probs=86.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC------CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL------DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++...  ....+.+.+|+.+++.+      .|+||+.+++.+. ..+..++++||+. ++|.+++.....      
T Consensus       125 vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~------  194 (429)
T 3kvw_A          125 VALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT-FRNHICMTFELLS-MNLYELIKKNKF------  194 (429)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-ETTEEEEEECCCC-CBHHHHHHHTTT------
T ss_pred             EEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-cCCeEEEEEeccC-CCHHHHHHhccC------
Confidence            689988754  33456677888888776      5779999999998 6788999999997 799988876432      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       195 ----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~  235 (429)
T 3kvw_A          195 ----QGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQ  235 (429)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESS
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcc
Confidence                23566677999999999999999999  999999999999975

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.82  E-value=2e-20  Score=123.61  Aligned_cols=89  Identities=16%  Similarity=0.270  Sum_probs=73.5

Q ss_pred             HHHHHHHHhhCCCCCccceeeeeeeC---CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          18 ALREYNIHKALDHPRVVKLYDVFEID---ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        18 ~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ...|+..+..++|+||+.+++++...   ....+++|||+ +++|.+++....           ..+.+..++.++.|++
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-----------~~l~~~~~~~i~~qi~  162 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-----------KRFSRKTVLQLSLRIL  162 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-----------SCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-----------CCCCHHHHHHHHHHHH
Confidence            34455566677899999999998632   24588999999 899999987531           2456667799999999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .|+.|||+.+  ++||||||+|||++
T Consensus       163 ~~l~~lH~~~--iiHrDlkp~Nill~  186 (364)
T 3op5_A          163 DILEYIHEHE--YVHGDIKASNLLLN  186 (364)
T ss_dssp             HHHHHHHHTT--EECCCCCGGGEEEE
T ss_pred             HHHHHHHHCC--eEEecCCHHHEEEe
Confidence            9999999999  99999999999997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.82  E-value=9.2e-20  Score=118.94  Aligned_cols=102  Identities=22%  Similarity=0.274  Sum_probs=79.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHh--hCCCCCccceeeeee----eCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHK--ALDHPRVVKLYDVFE----IDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~--~~~h~~i~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++...    ..+.+..|.++..  .++|+||+++++.+.    ......+++|||+++|+|.+++.....      
T Consensus        39 vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------  108 (336)
T 3g2f_A           39 VAVKVFSFA----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------  108 (336)
T ss_dssp             EEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCB------
T ss_pred             EEEEEeecc----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhccc------
Confidence            588988744    3345555555544  579999999997553    133467899999999999999975322      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcC---------CCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEI---------KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~~~i~h~dlk~~nill~~  121 (122)
                             .+..++.++.|++.|+.|||+.         +  ++||||||+|||++.
T Consensus       109 -------~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~--ivH~Dikp~Nill~~  155 (336)
T 3g2f_A          109 -------DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLNSRNVLVKN  155 (336)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC--EECSSCSGGGEEECT
T ss_pred             -------chhHHHHHHHHHHHHHHHHHhhhccccccccc--eeecccccceEEEcC
Confidence                   3445588999999999999998         8  999999999999975

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.81  E-value=4.8e-20  Score=122.39  Aligned_cols=106  Identities=27%  Similarity=0.455  Sum_probs=84.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC--------CCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccch
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD--------HPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTI   69 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~--------h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~   69 (122)
                      ||+|++...  ....+.+.+|+.+++.++        |+||+.+++.+..   +....+++|||+. +++.+.+....  
T Consensus        65 vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--  139 (397)
T 1wak_A           65 VAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIKSN--  139 (397)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHHTT--
T ss_pred             EEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHhcc--
Confidence            589988754  334577889999999885        7889999999862   3457899999995 77766665432  


Q ss_pred             hHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          70 AEREARCLSQPYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                              ...+.+..++.++.|++.|+.|||+. +  ++||||||+|||++.
T Consensus       140 --------~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~  182 (397)
T 1wak_A          140 --------YQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSV  182 (397)
T ss_dssp             --------TSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECC
T ss_pred             --------cCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEec
Confidence                    13456667799999999999999998 8  999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=8.4e-20  Score=121.34  Aligned_cols=104  Identities=23%  Similarity=0.330  Sum_probs=82.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------------------------------------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------------------------------------   43 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------------------------------------   43 (122)
                      ||+|++.....     ...+|+.+++.++|+||+++++++...                                     
T Consensus        35 vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (383)
T 3eb0_A           35 FALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQ  109 (383)
T ss_dssp             EEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------
T ss_pred             EEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCC
Confidence            58888875522     123799999999999999999998522                                     


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          44 ANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        44 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      ....+++|||++ ++|.+.+.....        ....+++..++.++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       110 ~~~~~lv~e~~~-~~L~~~l~~~~~--------~~~~l~~~~~~~i~~qi~~aL~~LH~~g--i~H~Dikp~Nil~~  175 (383)
T 3eb0_A          110 NKYLNVIMEYVP-DTLHKVLKSFIR--------SGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVN  175 (383)
T ss_dssp             CCEEEEEECCCS-EEHHHHHHHHHH--------TTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEEE
T ss_pred             ceEEEEEEecCC-ccHHHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHHCc--CccCccCHHHEEEc
Confidence            234889999998 688877764211        1235667777999999999999999999  99999999999996

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.81  E-value=4.2e-20  Score=122.39  Aligned_cols=103  Identities=30%  Similarity=0.471  Sum_probs=84.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCe------EEEEEeccCCCCHHHHHHhccchhHHh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANS------FCTVLEYCDGHDLDFYLKQHKTIAERE   73 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~~~~~~~   73 (122)
                      ||+|++.... .....+.+.+|+.+++.++||||+.+++++. ..+.      .++++||+. ++|...+..        
T Consensus        70 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--------  139 (371)
T 4exu_A           70 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFT-PASSLRNFYDFYLVMPFMQ-TDLQKIMGM--------  139 (371)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEC-SCSSSTTCCCCEEEEECCC-EEHHHHTTS--------
T ss_pred             EEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhhee-ccCCcccceeEEEEEcccc-ccHHHHhhc--------
Confidence            5899887653 2334577889999999999999999999997 3333      389999998 788766532        


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+.+..+..++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       140 ------~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~  179 (371)
T 4exu_A          140 ------EFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNE  179 (371)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECC
Confidence                  2556667999999999999999999  999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.81  E-value=1.6e-19  Score=121.43  Aligned_cols=105  Identities=22%  Similarity=0.274  Sum_probs=81.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-----CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||.+....     ....+|+++++.++|+||+.+++++...     ...+++++||+. +++...+....        
T Consensus        82 vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--------  147 (420)
T 1j1b_A           82 VAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYS--------  147 (420)
T ss_dssp             EEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-EEHHHHHHHHH--------
T ss_pred             EEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc-ccHHHHHHHHh--------
Confidence            5888886542     1234799999999999999999988421     124678999998 57766665311        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       148 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~  191 (420)
T 1j1b_A          148 RAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDP  191 (420)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEET
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeC
Confidence            11245667777999999999999999999  999999999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.81  E-value=6.5e-20  Score=118.76  Aligned_cols=105  Identities=21%  Similarity=0.293  Sum_probs=86.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||+|++.... .....+.+.+|+.++..++  |+||+.+++++. +.+..+++|| +.+++|.+++.....         
T Consensus        55 vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-~~~~~~lv~e-~~~~~L~~~l~~~~~---------  123 (313)
T 3cek_A           55 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-TDQYIYMVME-CGNIDLNSWLKKKKS---------  123 (313)
T ss_dssp             EEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-CSSEEEEEEC-CCSEEHHHHHHHCSS---------
T ss_pred             EEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-cCCEEEEEEe-cCCCcHHHHHHhcCC---------
Confidence            5889887652 2334577889999999996  599999999998 6778999999 556899999986443         


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         +.+..++.++.|++.|+.|||+.+  ++|+||||+||++++
T Consensus       124 ---~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~  162 (313)
T 3cek_A          124 ---IDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD  162 (313)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC
Confidence               344555899999999999999999  999999999999853

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.81  E-value=1.5e-19  Score=117.46  Aligned_cols=108  Identities=27%  Similarity=0.480  Sum_probs=85.6

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhC---CCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKAL---DHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||+|++.... .......+.+|+.+++.+   +||||+++++++..    .....++++||+. |+|.+++.....    
T Consensus        40 vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----  114 (326)
T 1blx_A           40 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE----  114 (326)
T ss_dssp             EEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCT----
T ss_pred             EEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhccc----
Confidence            5888887542 233445677888877766   89999999999851    3457889999998 799999876422    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       115 ------~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~  155 (326)
T 1blx_A          115 ------PGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTS  155 (326)
T ss_dssp             ------TCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcC
Confidence                  23566677999999999999999999  999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.81  E-value=6.9e-20  Score=119.26  Aligned_cols=110  Identities=22%  Similarity=0.320  Sum_probs=86.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHH-HHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYN-IHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||+|++...........+..|+. +++.++||||+++++++. ..+..+++|||+. ++|.+++.....       ....
T Consensus        50 vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-~~~~~~lv~e~~~-~~l~~~~~~~~~-------~~~~  120 (327)
T 3aln_A           50 MAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-REGDCWICMELMS-TSFDKFYKYVYS-------VLDD  120 (327)
T ss_dssp             EEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-CSSEEEEEECCCS-EEHHHHHHHHHH-------TTCC
T ss_pred             EEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-eCCceEEEEeecC-CChHHHHHHHHh-------hhcc
Confidence            58998886643344456666666 667779999999999998 6778899999998 688877764211       1123


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+. +  ++|+||||+||+++.
T Consensus       121 ~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~  161 (327)
T 3aln_A          121 VIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDR  161 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEET
T ss_pred             cCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcC
Confidence            556677799999999999999998 8  999999999999974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.80  E-value=3.8e-19  Score=114.09  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=85.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|++....   ..+.+.+|+.+++.++|++++..+..+.......++++||+ +++|.+++....           ..
T Consensus        37 vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-----------~~  101 (296)
T 3uzp_A           37 VAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCS-----------RK  101 (296)
T ss_dssp             EEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT-----------TC
T ss_pred             EEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhc-----------cC
Confidence            5888877552   23568899999999998887777777755778889999999 799999987422           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       102 ~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~  139 (296)
T 3uzp_A          102 FSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMG  139 (296)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEe
Confidence            566677999999999999999999  99999999999994

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.80  E-value=3.3e-20  Score=120.04  Aligned_cols=105  Identities=27%  Similarity=0.311  Sum_probs=81.7

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhC----CCCCccceeeeeeeCCCeEEEEEec-cCCCCHHHHHHhccchh
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKAL----DHPRVVKLYDVFEIDANSFCTVLEY-CDGHDLDFYLKQHKTIA   70 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~----~h~~i~~~~~~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~   70 (122)
                      ||+|++......     .....+.+|+.++.++    +|+||+.+++++. ..+..++++|+ +.+++|.+++...+.  
T Consensus        59 vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~~L~~~l~~~~~--  135 (312)
T 2iwi_A           59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE-TQEGFMLVLERPLPAQDLFDYITEKGP--  135 (312)
T ss_dssp             EEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------CEEEEECCSSEEEHHHHHHHHCS--
T ss_pred             EEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe-cCCeEEEEEEecCCCCCHHHHHHhcCC--
Confidence            588988765221     1334556789989888    8999999999998 66778899999 788999999876433  


Q ss_pred             HHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          71 EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                                +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       136 ----------~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~  173 (312)
T 2iwi_A          136 ----------LGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILID  173 (312)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEE
T ss_pred             ----------CCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEe
Confidence                      445556999999999999999999  99999999999997

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.80  E-value=2.8e-19  Score=117.08  Aligned_cols=103  Identities=23%  Similarity=0.378  Sum_probs=80.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHH-HHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREY-NIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|++...      ....+|+ ..++.++|+||+.+++++..   .....+++|||+.+|+|.+++.....        
T Consensus        57 vavK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--------  122 (336)
T 3fhr_A           57 CALKLLYDS------PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD--------  122 (336)
T ss_dssp             EEEEEEESS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-C--------
T ss_pred             EEEEEecCc------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCC--------
Confidence            588887643      2223333 34566799999999999862   14458899999999999999976421        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       123 --~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~  163 (336)
T 3fhr_A          123 --QAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTS  163 (336)
T ss_dssp             --CCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESC
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEe
Confidence              24566677999999999999999999  999999999999963

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.80  E-value=3.6e-19  Score=114.16  Aligned_cols=102  Identities=18%  Similarity=0.194  Sum_probs=83.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+.....   ..+.+.+|+.+++.++|++++..+..+.......+++|||+ +++|.+++....           ..
T Consensus        37 vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-----------~~  101 (296)
T 4hgt_A           37 VAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCS-----------RK  101 (296)
T ss_dssp             EEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT-----------SC
T ss_pred             EEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhc-----------CC
Confidence            5788766542   23458889999999998888887777755778889999999 799999987421           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF  119 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill  119 (122)
                      +.+..++.++.|++.|+.|||+.+  ++|+||||+||++
T Consensus       102 ~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~  138 (296)
T 4hgt_A          102 FSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLM  138 (296)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeee
Confidence            566677999999999999999999  9999999999998

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.80  E-value=5.4e-20  Score=120.96  Aligned_cols=104  Identities=28%  Similarity=0.448  Sum_probs=83.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC-----eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN-----SFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||.+.... .....+.+.+|+.+++.++||||+.+++++.....     ..+++|||+. ++|.+++.          
T Consensus        52 vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----------  120 (353)
T 3coi_A           52 VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG----------  120 (353)
T ss_dssp             EEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT----------
T ss_pred             EEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhc----------
Confidence            5899887653 22345678899999999999999999999972222     3589999998 67766543          


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++.
T Consensus       121 ----~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~  161 (353)
T 3coi_A          121 ----LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNE  161 (353)
T ss_dssp             ----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECT
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECC
Confidence                13556667999999999999999999  999999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.80  E-value=8.9e-20  Score=118.66  Aligned_cols=105  Identities=25%  Similarity=0.300  Sum_probs=86.6

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCC-CCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~   72 (122)
                      ||||++......     ...+.+.+|+.+++.++  |+||+.+++++. ..+..++++|++.+ ++|.+++...+.    
T Consensus        71 vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~~L~~~l~~~~~----  145 (320)
T 3a99_A           71 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGA----  145 (320)
T ss_dssp             EEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHCS----
T ss_pred             EEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe-cCCcEEEEEEcCCCCccHHHHHhccCC----
Confidence            588888765221     13356778999999995  599999999998 77888999999976 899999876443    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                              +.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       146 --------l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~  183 (320)
T 3a99_A          146 --------LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILID  183 (320)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEE
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEe
Confidence                    344555899999999999999999  99999999999997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.79  E-value=2.7e-19  Score=117.22  Aligned_cols=104  Identities=27%  Similarity=0.419  Sum_probs=83.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCC------ccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPR------VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~------i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||+|+++..  ....+.+.+|+.+++.++|++      ++.+.+++. ..+..+++|||+. +++.+.+.....      
T Consensus        48 vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~lv~e~~~-~~l~~~l~~~~~------  117 (355)
T 2eu9_A           48 VALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN-FHGHMCIAFELLG-KNTFEFLKENNF------  117 (355)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE-ETTEEEEEEECCC-CBHHHHHHHTTT------
T ss_pred             EEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee-eCCeEEEEEeccC-CChHHHHHhccC------
Confidence            588888754  334577888999999887655      888888887 6778999999995 778777765321      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                          ..+.+..++.++.|++.|+.|||+.+  ++|+||||+||+++
T Consensus       118 ----~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~  157 (355)
T 2eu9_A          118 ----QPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFV  157 (355)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEES
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEe
Confidence                24566677999999999999999999  99999999999993

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.79  E-value=5.7e-19  Score=117.89  Aligned_cols=104  Identities=24%  Similarity=0.318  Sum_probs=78.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      +|+|.+.....     ...+|+.+++.++||||+++++++....     ..++++|||+. +++...+.....       
T Consensus        67 ~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-------  133 (394)
T 4e7w_A           67 VAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVYRASRHYAK-------  133 (394)
T ss_dssp             EEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS-EEHHHHHHHHHH-------
T ss_pred             EEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC-ccHHHHHHHHHh-------
Confidence            46666654421     1236999999999999999999985222     23789999998 455444432111       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                       ....+++..++.++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       134 -~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~  175 (394)
T 4e7w_A          134 -LKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLD  175 (394)
T ss_dssp             -TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEE
T ss_pred             -hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEc
Confidence             1245666777999999999999999999  99999999999997

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.78  E-value=1.8e-19  Score=124.50  Aligned_cols=84  Identities=17%  Similarity=0.151  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      .+.+.+|++++++++||||+.+...+. ..+..+++|||+++++|.+++..        .            ..++.|++
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~~-~~~~~~lVmE~~~ggsL~~~l~~--------~------------~~i~~qi~  441 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFDV-DLDNKRIMMSYINGKLAKDVIED--------N------------LDIAYKIG  441 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEEE-ETTTTEEEEECCCSEEHHHHSTT--------C------------THHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEEE-eCCccEEEEECCCCCCHHHHHHH--------H------------HHHHHHHH
Confidence            345789999999999999995555554 44556899999999999998875        1            68999999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .++.|||+.+  ++||||||+|||++.
T Consensus       442 ~aL~~LH~~g--IiHrDiKp~NILl~~  466 (540)
T 3en9_A          442 EIVGKLHKND--VIHNDLTTSNFIFDK  466 (540)
T ss_dssp             HHHHHHHHTT--EECTTCCTTSEEESS
T ss_pred             HHHHHHHHCc--CccCCCCHHHEEECC
Confidence            9999999999  999999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.78  E-value=3.7e-19  Score=117.05  Aligned_cols=108  Identities=19%  Similarity=0.257  Sum_probs=82.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCC------eEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDAN------SFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||++...  ........+++..+..++||||+++++++.....      ..+++|||+. +++...+.....      
T Consensus        51 vavK~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~------  121 (360)
T 3e3p_A           51 VAIKKVIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYR------  121 (360)
T ss_dssp             EEEEEEECC--TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCS-CBHHHHHHHHHT------
T ss_pred             EEEEEEecC--ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccc-ccHHHHHHHHhh------
Confidence            588988655  3344667788888899999999999999852221      3789999998 566555442110      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHH--cCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLN--EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh--~~~~~i~h~dlk~~nill~~  121 (122)
                        ....+.+..++.++.|++.|+.|||  +.+  ++|+||||+||+++.
T Consensus       122 --~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~  166 (360)
T 3e3p_A          122 --RQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNE  166 (360)
T ss_dssp             --TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEET
T ss_pred             --cccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeC
Confidence              1234556667899999999999999  878  999999999999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.78  E-value=1.6e-19  Score=119.57  Aligned_cols=107  Identities=11%  Similarity=0.192  Sum_probs=68.7

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhC--CCCCcccee-------eeeeeCC----------------CeEEEEEec
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKAL--DHPRVVKLY-------DVFEIDA----------------NSFCTVLEY   53 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~--~h~~i~~~~-------~~~~~~~----------------~~~~lv~e~   53 (122)
                      ||+|++.....  ....+.+.+|+.+++.+  +||||+.++       +.+...+                ...++||||
T Consensus        90 vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  169 (371)
T 3q60_A           90 FALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA  169 (371)
T ss_dssp             EEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECC
T ss_pred             eEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecC
Confidence            68999987632  22445666775444444  699987755       3332111                347999999


Q ss_pred             cCCCCHHHHHHhccchhHHhhhhcCCCCChHHH------HHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          54 CDGHDLDFYLKQHKTIAEREARCLSQPYLSTSA------RSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        54 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +. |+|.+++...+..           +.+...      +.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       170 ~~-~~L~~~l~~~~~~-----------~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivHrDikp~NIll~~  229 (371)
T 3q60_A          170 AS-VDLELLFSTLDFV-----------YVFRGDEGILALHILTAQLIRLAANLQSKG--LVHGHFTPDNLFIMP  229 (371)
T ss_dssp             CS-EEHHHHHHHHHHS-----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEETTCSGGGEEECT
T ss_pred             CC-CCHHHHHHHhccc-----------cchhhhhhhhhHHHHHHHHHHHHHHHHHCC--CccCcCCHHHEEECC
Confidence            99 8999999864221           122222      456699999999999999  999999999999975

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.78  E-value=2.4e-18  Score=117.58  Aligned_cols=103  Identities=16%  Similarity=0.213  Sum_probs=81.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.....   .+.+.+|+.+++.++|.+.+..+..+.......+++|||+ +++|.+++....           ..
T Consensus        35 vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~-----------~~   99 (483)
T 3sv0_A           35 VAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCS-----------RK   99 (483)
T ss_dssp             EEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT-----------TC
T ss_pred             EEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhc-----------CC
Confidence            68898775522   3458899999999977544444444443778889999999 799999987521           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.||.|||+.+  ++||||||+|||++
T Consensus       100 l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~  137 (483)
T 3sv0_A          100 LSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMG  137 (483)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEe
Confidence            566677999999999999999999  99999999999993

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.77  E-value=3.7e-19  Score=117.41  Aligned_cols=105  Identities=21%  Similarity=0.325  Sum_probs=84.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-----------CCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-----------HPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQH   66 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----------h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~   66 (122)
                      ||||++...  ....+.+.+|+.+++.++           |+||+.+++++....   ...++++|++ +++|.+++...
T Consensus        47 vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~  123 (373)
T 1q8y_A           47 VAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKY  123 (373)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHT
T ss_pred             EEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHh
Confidence            588888754  234567788999998875           889999999986322   2788999999 79999998763


Q ss_pred             cchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCcccc
Q psy4991          67 KTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~  120 (122)
                      ..          ..+.+..++.++.|++.|+.|||+. +  ++|+||||+||+++
T Consensus       124 ~~----------~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~  166 (373)
T 1q8y_A          124 EH----------RGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLME  166 (373)
T ss_dssp             TT----------SCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEE
T ss_pred             hc----------cCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEe
Confidence            22          2355666799999999999999998 8  99999999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=112.96  Aligned_cols=106  Identities=23%  Similarity=0.275  Sum_probs=80.6

Q ss_pred             CeeeeccCCCCCcchHHH-HHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHA-LREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~-~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||++............ ..+..+++.++||||+++++++. +.+..+++|||+ ++.+..+....           ..
T Consensus        53 vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~~~~l~~~~-----------~~  119 (318)
T 2dyl_A           53 IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-TNTDVFIAMELM-GTCAEKLKKRM-----------QG  119 (318)
T ss_dssp             EEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-CSSEEEEEECCC-SEEHHHHHHHH-----------TS
T ss_pred             EEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-cCCcEEEEEecc-CCcHHHHHHHh-----------cc
Confidence            588988766333233333 34445677789999999999998 678899999999 45555554431           12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..++.++.|++.|+.|||+. +  ++|+||||+||+++.
T Consensus       120 ~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~  160 (318)
T 2dyl_A          120 PIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDE  160 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECC
Confidence            455667799999999999999995 8  999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.75  E-value=4.4e-18  Score=113.03  Aligned_cols=106  Identities=25%  Similarity=0.338  Sum_probs=83.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-CC-----CccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-HP-----RVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-h~-----~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++..  ......+.+|+.+++.++ |+     +++.+++.+. ..+..++||||+. ++|.+++.....      
T Consensus        82 vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~~-~~L~~~l~~~~~------  151 (382)
T 2vx3_A           82 VAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM-FRNHLCLVFEMLS-YNLYDLLRNTNF------  151 (382)
T ss_dssp             EEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE-ETTEEEEEEECCC-CBHHHHHHHTTT------
T ss_pred             EEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec-cCCceEEEEecCC-CCHHHHHhhcCc------
Confidence            688988754  234566778888888884 55     3889999888 6688999999997 699999876421      


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                          ..+.+..+..++.|++.|+.|||+...+++||||||+|||++
T Consensus       152 ----~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~  193 (382)
T 2vx3_A          152 ----RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLC  193 (382)
T ss_dssp             ----SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEES
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEe
Confidence                235566679999999999999995323399999999999995

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.73  E-value=2.5e-18  Score=110.37  Aligned_cols=80  Identities=15%  Similarity=0.214  Sum_probs=65.1

Q ss_pred             hHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHH
Q psy4991          15 PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVV   94 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   94 (122)
                      ...+.+|+.+++.++  | +.+.+++. . +..+++|||+++++|.+ +...                  ....++.|++
T Consensus       148 ~~~~~~E~~~l~~l~--~-~~v~~~~~-~-~~~~lvmE~~~g~~L~~-l~~~------------------~~~~i~~qi~  203 (282)
T 1zar_A          148 IRSARNEFRALQKLQ--G-LAVPKVYA-W-EGNAVLMELIDAKELYR-VRVE------------------NPDEVLDMIL  203 (282)
T ss_dssp             HHHHHHHHHHHHHTT--T-SSSCCEEE-E-ETTEEEEECCCCEEGGG-CCCS------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcc--C-CCcCeEEe-c-cceEEEEEecCCCcHHH-cchh------------------hHHHHHHHHH
Confidence            456889999999998  5 66666664 2 44689999999999977 3211                  1157999999


Q ss_pred             HHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          95 SALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        95 ~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      .|+.|||+.+  ++||||||+|||++
T Consensus       204 ~~l~~lH~~g--iiHrDlkp~NILl~  227 (282)
T 1zar_A          204 EEVAKFYHRG--IVHGDLSQYNVLVS  227 (282)
T ss_dssp             HHHHHHHHTT--EECSCCSTTSEEEE
T ss_pred             HHHHHHHHCC--CEeCCCCHHHEEEE
Confidence            9999999999  99999999999986

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.59  E-value=1.9e-15  Score=101.51  Aligned_cols=113  Identities=10%  Similarity=-0.043  Sum_probs=73.2

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCC-CCccceeee---------------------eee----CCCeEEEEEe
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDH-PRVVKLYDV---------------------FEI----DANSFCTVLE   52 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~---------------------~~~----~~~~~~lv~e   52 (122)
                      ||||++....  .....+.+.+|+.+++.+.| ++.......                     +..    .....+++++
T Consensus       106 vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (413)
T 3dzo_A          106 FEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP  185 (413)
T ss_dssp             EEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEE
T ss_pred             eEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEee
Confidence            6899988542  22346788999999999977 222111111                     110    0123566777


Q ss_pred             ccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          53 YCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        53 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+. ++|.+++........     ....+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       186 ~~~-~~L~~ll~~l~~~~~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHrDiKp~NILl~~  246 (413)
T 3dzo_A          186 RMQ-SNLQTFGEVLLSHSS-----THKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDIVLDQ  246 (413)
T ss_dssp             CCS-EEHHHHHHHHHHHTT-----TSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             hhc-CCHHHHHHHhhcccc-----cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcccceEEEec
Confidence            664 899988863211000     0112344556888999999999999999  999999999999975

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.59  E-value=2.1e-15  Score=95.63  Aligned_cols=85  Identities=15%  Similarity=0.135  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCC-C----CHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991          17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDG-H----DLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM   91 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (122)
                      .+.+|+..+..+.|+++....-...   ...+++|||+.+ |    +|.+....   .            .+.....++.
T Consensus       116 ~~~~E~~~l~~l~~~~i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~---~------------~~~~~~~i~~  177 (258)
T 1zth_A          116 WTEKEFRNLERAKEAGVSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE---L------------KELDVEGIFN  177 (258)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG---G------------GGSCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc---c------------ChHHHHHHHH
Confidence            6788999999998876522221112   245799999942 3    55544321   1            1223478999


Q ss_pred             HHHHHHHHHH-cCCCCeeeeCCCCCCccccc
Q psy4991          92 QVVSALKYLN-EIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        92 ~i~~~l~~lh-~~~~~i~h~dlk~~nill~~  121 (122)
                      |++.++.||| +.+  ++||||||+|||++.
T Consensus       178 qi~~~l~~lH~~~g--ivHrDlkp~NILl~~  206 (258)
T 1zth_A          178 DVVENVKRLYQEAE--LVHADLSEYNIMYID  206 (258)
T ss_dssp             HHHHHHHHHHHTSC--EECSSCSTTSEEESS
T ss_pred             HHHHHHHHHHHHCC--EEeCCCCHHHEEEcC
Confidence            9999999999 888  999999999999863

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.52  E-value=1.8e-15  Score=100.70  Aligned_cols=55  Identities=15%  Similarity=0.113  Sum_probs=43.8

Q ss_pred             EEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          47 FCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        47 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+++|||+.|++|.++....                  ....++.|++.++.+||..|  ++||||||.|||+++
T Consensus       186 ~~LVME~i~G~~L~~l~~~~------------------~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~  240 (397)
T 4gyi_A          186 HTIVMSLVDALPMRQVSSVP------------------DPASLYADLIALILRLAKHG--LIHGDFNEFNILIRE  240 (397)
T ss_dssp             TEEEEECCSCEEGGGCCCCS------------------CHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEE
T ss_pred             ceEEEEecCCccHhhhcccH------------------HHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeC
Confidence            36899999987775432110                  11567899999999999999  999999999999974

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.10  E-value=3.5e-10  Score=71.41  Aligned_cols=83  Identities=11%  Similarity=0.076  Sum_probs=56.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      +++|+.+.... .....+.+|+.+++.+ .+..+..+++.+. ..+..+++|||++|.++.+.+...     ..      
T Consensus        40 ~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-~~~~~~lv~e~i~G~~l~~~~~~~-----~~------  106 (263)
T 3tm0_A           40 LYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFER-HDGWSNLLMSEADGVLCSEEYEDE-----QS------  106 (263)
T ss_dssp             EEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCSSEEHHHHCCTT-----TC------
T ss_pred             EEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-cCCceEEEEEecCCeehhhccCCc-----cc------
Confidence            35677664311 2235688999999988 4677888888887 567788999999988887642110     00      


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNE  102 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~  102 (122)
                            ...++.++..++..||+
T Consensus       107 ------~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A          107 ------PEKIIELYAECIRLFHS  123 (263)
T ss_dssp             ------HHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHhC
Confidence                  13556677777777776

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.77  E-value=8.9e-09  Score=64.57  Aligned_cols=54  Identities=19%  Similarity=0.057  Sum_probs=37.5

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCCCCC--ccceeeeeeeCCCeEEEEEeccCCCCHH
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALDHPR--VVKLYDVFEIDANSFCTVLEYCDGHDLD   60 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~h~~--i~~~~~~~~~~~~~~~lv~e~~~~~~L~   60 (122)
                      ++|+....    ....+.+|+.+++.+.+.+  +..+++... ..+..+++|||++|.++.
T Consensus        48 vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           48 FVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVT-EAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             EEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-CSSCEEEEEECCSSEETT
T ss_pred             EEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEecc-CCCCCEEEEEecCCcccC
Confidence            45654432    2356788999998884333  566777776 556678999999987774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.77  E-value=1.2e-08  Score=67.22  Aligned_cols=44  Identities=30%  Similarity=0.485  Sum_probs=32.6

Q ss_pred             hHHHHHHHHHHhhCC--CCCccceeeeeeeCC---CeEEEEEeccCCCCH
Q psy4991          15 PRHALREYNIHKALD--HPRVVKLYDVFEIDA---NSFCTVLEYCDGHDL   59 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L   59 (122)
                      ...+.+|..+++.+.  +..++.++..+. +.   +..+++|||++|.++
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~-~~~~~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCE-DESVIGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEEC-CTTTTSSCEEEEECCCCBCC
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECC-CCCccCCeEEEEEecCCeec
Confidence            457888999999886  456788888776 33   347799999997666

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.10  E-value=4.4e-05  Score=48.14  Aligned_cols=49  Identities=8%  Similarity=-0.043  Sum_probs=37.0

Q ss_pred             chHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHH
Q psy4991          14 FPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL   63 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   63 (122)
                      ....+.+|...|+.+ .+-.+..+++.+. +.+..+++||+++|.++.+..
T Consensus        62 ~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           62 VANDVTDEMVRLNWLTAFMPLPTIKHFIR-TPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCCSEEHHHHH
T ss_pred             CHhHHHHHHHHHHHhccCCCcCeEEEEEE-ECCeEEEEEEeeCCccccccc
Confidence            345678899998877 3445777888777 567788999999987776654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.80  E-value=6e-05  Score=48.46  Aligned_cols=48  Identities=13%  Similarity=-0.022  Sum_probs=30.1

Q ss_pred             chHHHHHHHHHHhhC-CCCC--ccceeeeeeeCC--CeEEEEEeccCCCCHHH
Q psy4991          14 FPRHALREYNIHKAL-DHPR--VVKLYDVFEIDA--NSFCTVLEYCDGHDLDF   61 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~-~h~~--i~~~~~~~~~~~--~~~~lv~e~~~~~~L~~   61 (122)
                      ....+.+|.++++.+ .+..  +..++.......  ...+++|++++|.++..
T Consensus        53 ~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~  105 (304)
T 3sg8_A           53 GSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTP  105 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCc
Confidence            356788999999887 4333  344444433111  13468899999877754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.61  E-value=0.00048  Score=44.44  Aligned_cols=48  Identities=8%  Similarity=-0.095  Sum_probs=33.8

Q ss_pred             chHHHHHHHHHHhhCCCC---CccceeeeeeeCCCeEEEEEeccCCCCHHH
Q psy4991          14 FPRHALREYNIHKALDHP---RVVKLYDVFEIDANSFCTVLEYCDGHDLDF   61 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~---~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~   61 (122)
                      ....+.+|.++++.+.+.   .+..++.......+..+++|||++|.++..
T Consensus        52 ~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           52 GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            346788999999998542   355666555424455679999999877754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.68  E-value=0.0024  Score=41.83  Aligned_cols=45  Identities=7%  Similarity=0.081  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHhhCC-C--CCccceeeeeeeCC--CeEEEEEeccCCCCHH
Q psy4991          16 RHALREYNIHKALD-H--PRVVKLYDVFEIDA--NSFCTVLEYCDGHDLD   60 (122)
Q Consensus        16 ~~~~~e~~~l~~~~-h--~~i~~~~~~~~~~~--~~~~lv~e~~~~~~L~   60 (122)
                      ..+.+|..+++.+. +  ..+..++..+....  +..+++|||++|.++.
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            56788888888873 3  35677777765221  3457899999876543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.62  E-value=0.021  Score=36.83  Aligned_cols=16  Identities=31%  Similarity=0.511  Sum_probs=14.0

Q ss_pred             CCeeeeCCCCCCcccc
Q psy4991         105 PPVIHYDLKPGKPLFL  120 (122)
Q Consensus       105 ~~i~h~dlk~~nill~  120 (122)
                      ..++|+|+.+.||+++
T Consensus       222 ~~l~HgD~~~~Nil~~  237 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG  237 (346)
T ss_dssp             CCEECSSCSTTSEEEC
T ss_pred             CceecCCCCcccEEEe
Confidence            3499999999999985

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.06  E-value=0.091  Score=33.33  Aligned_cols=52  Identities=13%  Similarity=-0.017  Sum_probs=30.0

Q ss_pred             eeeeccCCCCCcchHHHHHHHHHHhhCC-C--CCccceeeeeeeCCCeEEEEEeccCCCCH
Q psy4991           2 CAKLLTTNLNLPFPRHALREYNIHKALD-H--PRVVKLYDVFEIDANSFCTVLEYCDGHDL   59 (122)
Q Consensus         2 avK~~~~~~~~~~~~~~~~e~~~l~~~~-h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   59 (122)
                      .+|+.+.+ .......+.+|...|+.+. .  ..++.+++..   ..  +++|||..++..
T Consensus        43 ~vK~~~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---~~--~lv~e~l~~~~~   97 (288)
T 3f7w_A           43 FVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---DR--TLAMEWVDERPP   97 (288)
T ss_dssp             EEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---TT--EEEEECCCCCCC
T ss_pred             EEEEeCCC-CcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---Cc--eEEEEeecccCC
Confidence            45655443 2223456788999888873 2  2344444432   22  578999876543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.90  E-value=0.015  Score=38.68  Aligned_cols=40  Identities=20%  Similarity=0.073  Sum_probs=25.1

Q ss_pred             hHHHHHHHHHHhhCC-C-C-CccceeeeeeeCCCeEEEEEeccCCC
Q psy4991          15 PRHALREYNIHKALD-H-P-RVVKLYDVFEIDANSFCTVLEYCDGH   57 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~-h-~-~i~~~~~~~~~~~~~~~lv~e~~~~~   57 (122)
                      .+++..|.++++.+. . + .+..++...   ....+++||++++.
T Consensus        78 ~~r~~~E~~~L~~l~~~~~~~vP~~~~~d---~~~~~lvmE~l~g~  120 (397)
T 2olc_A           78 IDRARIESSALIRQGEHVPHLVPRVFYSD---TEMAVTVMEDLSHL  120 (397)
T ss_dssp             TTHHHHHHHHHHHHHTTCGGGSCCEEEEE---TTTTEEEECCCTTS
T ss_pred             HHHHHHHHHHHHHhhhhCCCCcCeEEEEc---CCccEEEEEeCCCc
Confidence            456678999888773 2 2 344555432   23346899999753

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.10  E-value=0.092  Score=35.07  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=26.9

Q ss_pred             chHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCH
Q psy4991          14 FPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDL   59 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   59 (122)
                      ......+|.++++.+. +.-..++++.+. +    .+++||++|.++
T Consensus        96 ~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-~----g~v~e~i~G~~l  137 (379)
T 3feg_A           96 GVDSLVLESVMFAILAERSLGPQLYGVFP-E----GRLEQYIPSRPL  137 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSSCCEEEEET-T----EEEEECCSEEEC
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCeEEEEcC-C----ccEEEEecCccC
Confidence            3456678999988773 333356666554 2    279999987554

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=93.25  E-value=0.14  Score=32.65  Aligned_cols=15  Identities=20%  Similarity=-0.077  Sum_probs=12.7

Q ss_pred             CeeeeCCCCCCcccc
Q psy4991         106 PVIHYDLKPGKPLFL  120 (122)
Q Consensus       106 ~i~h~dlk~~nill~  120 (122)
                      .++|+|+.+.||+.+
T Consensus       174 ~l~HgDl~~~Nil~~  188 (301)
T 3dxq_A          174 AACHCDPLCENFLDT  188 (301)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eeeccCCCcCCEEEC
Confidence            479999999999843

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.96  E-value=0.38  Score=31.20  Aligned_cols=63  Identities=14%  Similarity=0.048  Sum_probs=45.1

Q ss_pred             hHHHHHHHHHHhhCC---CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHH
Q psy4991          15 PRHALREYNIHKALD---HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVM   91 (122)
Q Consensus        15 ~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (122)
                      ...+.+|.+.|+.+.   ...++.++.... ..+..+++|||+++.++..                          ....
T Consensus        72 ~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-~~g~~~lvme~l~G~~~~~--------------------------~~~~  124 (312)
T 3jr1_A           72 RSMFRAEADQLALLAKTNSINVPLVYGIGN-SQGHSFLLLEALNKSKNKQ--------------------------SSFT  124 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-CSSEEEEEEECCCCCCCCT--------------------------THHH
T ss_pred             HHHHHHHHHHHHHHHhhCCCCcceEEEEee-cCCceEEEEEeccCCCCCc--------------------------hhHH
Confidence            466788988888772   357788888776 5567889999999765310                          1245


Q ss_pred             HHHHHHHHHHcCC
Q psy4991          92 QVVSALKYLNEIK  104 (122)
Q Consensus        92 ~i~~~l~~lh~~~  104 (122)
                      ++...+..||...
T Consensus       125 ~lG~~LA~LH~~~  137 (312)
T 3jr1_A          125 IFAEKIAQLHQIQ  137 (312)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHcCC
Confidence            6777888899864

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=84.14  E-value=0.68  Score=31.05  Aligned_cols=17  Identities=29%  Similarity=0.417  Sum_probs=14.6

Q ss_pred             CCeeeeCCCCCCccccc
Q psy4991         105 PPVIHYDLKPGKPLFLF  121 (122)
Q Consensus       105 ~~i~h~dlk~~nill~~  121 (122)
                      ..++|+|+.|.||+++.
T Consensus       232 ~~liHGDl~~~Nil~~~  248 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQ  248 (420)
T ss_dssp             CEEECSCCSGGGEEECS
T ss_pred             CeEEecCCCCCcEEEeC
Confidence            34899999999999864

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=82.07  E-value=0.077  Score=36.41  Aligned_cols=28  Identities=7%  Similarity=0.016  Sum_probs=24.0

Q ss_pred             chHHHHHHHHHHhhCCCCCccceeeeee
Q psy4991          14 FPRHALREYNIHKALDHPRVVKLYDVFE   41 (122)
Q Consensus        14 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~   41 (122)
                      ..+.|..|++.+.+++|+|++.+.|+|.
T Consensus       322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~  349 (487)
T 3oja_A          322 GSETERLECERENQARQREIDALKEQYR  349 (487)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHhcccccchhhHHHHhc
Confidence            3568999999999999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	122
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	8e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-13
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-12
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-11
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.001

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 8e-20
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           KL+   +        +RE  +    + P +V  Y  F          +E+ DG  LD  L
Sbjct: 37  KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVL 95

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           K+   I E+                + + V+  L YL E K  ++H D+KP   L 
Sbjct: 96  KKAGRIPEQI------------LGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILV 138

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.7 bits (183), Expect = 8e-18
 Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 15/117 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K +              E  +   + HP +V L D++E        +++   G +L   +
Sbjct: 40  KCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE-SGGHLYLIMQLVSGGELFDRI 98

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
            +     ER+            A  ++ QV+ A+KYL++    ++H DLKP   L+ 
Sbjct: 99  VEKGFYTERD------------ASRLIFQVLDAVKYLHD--LGIVHRDLKPENLLYY 141

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 1e-17
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 15/115 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLD 60
           +L    L     +    E  + K L HP +V+ YD +E           V E      L 
Sbjct: 41  ELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK 100

Query: 61  FYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPG 115
            YLK+ K +  +  R            S   Q++  L++L+   PP+IH DLK  
Sbjct: 101 TYLKRFKVMKIKVLR------------SWCRQILKGLQFLHTRTPPIIHRDLKCD 143

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.5 bits (180), Expect = 2e-17
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 15/104 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +  ++E    + L HP  ++    +    ++   V+EYC G   D      K + E E  
Sbjct: 60  QDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA 118

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        +    +  L YL+     +IH D+K G  L 
Sbjct: 119 A------------VTHGALQGLAYLHSHN--MIHRDVKAGNILL 148

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 71.6 bits (175), Expect = 1e-16
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 16/107 (14%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL-KQHKTIAERE 73
                +E      L HP +V L+D FE D N    + E+  G +L   +  +H  ++E E
Sbjct: 67  KETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEHNKMSEDE 125

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL 120
           A               + QV   L +++E     +H DLKP   +F 
Sbjct: 126 AVE------------YMRQVCKGLCHMHENN--YVHLDLKPENIMFT 158

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 2e-16
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 14/104 (13%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              + E +I  + DHP +VKL D F    N+   ++E+C G  +D  + + +        
Sbjct: 54  EDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELE-------- 104

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
              +P   +  + +  Q + AL YL++ K  +IH DLK G  LF
Sbjct: 105 ---RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILF 143

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 2e-16
 Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 12/104 (11%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +  L E ++   L H  +V+L  V   +      V EY     L  YL+           
Sbjct: 45  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 104

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                          + V  A++YL       +H DL     L 
Sbjct: 105 ----------LLKFSLDVCEAMEYLE--GNNFVHRDLAARNVLV 136

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 5e-16
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K++     +  P +  +E  I+K L+H  VVK Y       N     LEYC G +L   +
Sbjct: 36  KIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-NIQYLFLEYCSGGELFDRI 94

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +    + E +A+                Q+++ + YL+ I   + H D+KP
Sbjct: 95  EPDIGMPEPDAQR------------FFHQLMAGVVYLHGIG--ITHRDIKP 131

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 6e-16
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
            +  RE ++   LDHP  VKLY  F+ D       L Y    +L  Y+++  +  E   R
Sbjct: 53  PYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTR 111

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                           ++VSAL+YL+     +IH DLKP
Sbjct: 112 F------------YTAEIVSALEYLHG--KGIIHRDLKP 136

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 69.0 bits (168), Expect = 8e-16
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 17/109 (15%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEID---ANSFCTVLEYCDGHDLDFYLKQHKTIA 70
           F     RE     AL+HP +V +YD  E +         V+EY DG  L   +     + 
Sbjct: 50  FYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 109

Query: 71  EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            +             A  ++     AL + ++    +IH D+KP   + 
Sbjct: 110 PKR------------AIEVIADACQALNFSHQ--NGIIHRDVKPANIMI 144

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 1e-15
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
                L E N+ + LD+P +V++  + E +  S+  V+E  +   L+ YL+Q++ + ++ 
Sbjct: 51  LKDELLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKN 108

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                          +V QV   +KYL   +   +H DL     L 
Sbjct: 109 ------------IIELVHQVSMGMKYLE--ESNFVHRDLAARNVLL 140

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 3e-15
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 12/120 (10%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVF-EIDANSFCTVLEYCDGHDLDFY 62
           +L   ++     +  + E N+ + L HP +V+ YD   +    +   V+EYC+G DL   
Sbjct: 36  ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV 95

Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYL---NEIKPPVIHYDLKPGKPLF 119
           + +      +E + L + +       ++ Q+  ALK     ++    V+H DLKP     
Sbjct: 96  ITKGT----KERQYLDEEF----VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 147

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 67.8 bits (165), Expect = 3e-15
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 16/105 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFYLKQHKTIAEREA 74
                E +I   L HP+++ L+D FE D      +LE+  G +L D    +   ++E E 
Sbjct: 71  YTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 129

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                          + Q    LK+++E    ++H D+KP   + 
Sbjct: 130 IN------------YMRQACEGLKHMHEHS--IVHLDIKPENIMC 160

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.9 bits (163), Expect = 4e-15
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
                 RE  I   L HP +++LY  F  DA     +LEY     +   L++     E+ 
Sbjct: 49  VEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKFDEQR 107

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                         + + ++ +AL Y +  +  VIH D+KP
Sbjct: 108 ------------TATYITELANALSYCHSKR--VIHRDIKP 134

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 1e-14
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K+L            +RE  I   LD+P +V+L  V +  A +   V+E   G  L  +L
Sbjct: 42  KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLVMEMAGGGPLHKFL 99

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
              +           +    ++   ++ QV   +KYL   +   +H DL  
Sbjct: 100 VGKR-----------EEIPVSNVAELLHQVSMGMKYLE--EKNFVHRDLAA 137

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 1e-14
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 16/106 (15%)

Query: 18  ALREYNIH-KALDHPRVVKLYDVFE---IDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           A RE  +H +A   P +V++ DV+E           V+E  DG +L   ++         
Sbjct: 51  ARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG------ 104

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                Q +    A  I+  +  A++YL+ I   + H D+KP   L+
Sbjct: 105 ----DQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLY 144

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 1e-14
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 10/118 (8%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62
           K+L  + +L      + E  +   L +H  +V L             + EYC   DL  +
Sbjct: 59  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNF 117

Query: 63  LKQHKTIAEREARCLSQPYLST------SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           L++ +          +               S   QV   + +L       IH DL  
Sbjct: 118 LRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAA 173

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.5 bits (159), Expect = 2e-14
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 15/106 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
              +     ++    D P +V +   F    +    +L+  +G DL ++L QH   +E +
Sbjct: 50  LALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 108

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            R                +++  L++++     V++ DLKP   L 
Sbjct: 109 MRF------------YAAEIILGLEHMHN--RFVVYRDLKPANILL 140

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 3e-14
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 15/123 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62
           K+L    +       + E  +   L  H  +V L       +     + EYC   DL  Y
Sbjct: 73  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNY 131

Query: 63  LKQHK-TIAEREARCLSQPYLSTS----------ARSIVMQVVSALKYLNEIKPPVIHYD 111
           L+  +   +E E    +Q  L                   QV   +++L       +H D
Sbjct: 132 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRD 189

Query: 112 LKP 114
           L  
Sbjct: 190 LAA 192

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 4e-14
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHK-TIAEREA 74
               +E +I     H  ++ L++ FE        + E+  G D+   +      + ERE 
Sbjct: 46  VLVKKEISILNIARHRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREI 104

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                          V QV  AL++L+     + H+D++P   ++
Sbjct: 105 VS------------YVHQVCEALQFLHSHN--IGHFDIRPENIIY 135

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 63.6 bits (154), Expect = 7e-14
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 16/107 (14%)

Query: 14  FPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
                L+E +I + +  HP +++L D +E     F  V +     +L  YL +  T++E+
Sbjct: 52  LREATLKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVTLSEK 110

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           E R             I+  ++  +  L+++   ++H DLKP   L 
Sbjct: 111 ETRK------------IMRALLEVICALHKLN--IVHRDLKPENILL 143

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 1e-13
 Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 15/104 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
           +    E  + +   H  ++         A     V ++C+G  L  +L   +T  E    
Sbjct: 49  QAFKNEVGVLRKTRHVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                        I  Q    + YL+     +IH DLK      
Sbjct: 107 -----------IDIARQTAQGMDYLH--AKSIIHRDLKSNNIFL 137

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 2e-13
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P   L E N+ K L H R+V+LY V   +      + EY +   L  +LK    I     
Sbjct: 52  PDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTIN 109

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +             +  Q+   + ++ E     IH DL+ 
Sbjct: 110 K----------LLDMAAQIAEGMAFIEE--RNYIHRDLRA 137

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 3e-13
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 16/104 (15%)

Query: 11  NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA 70
             P     + E  + +   +P +V   D +    +    V+EY  G  L   + +     
Sbjct: 57  QQPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDE 115

Query: 71  EREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +               ++  + + AL++L+  +  VIH D+K 
Sbjct: 116 GQ-------------IAAVCRECLQALEFLHSNQ--VIHRDIKS 144

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 7e-13
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 8/116 (6%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62
           K +    +    R    E  +   L  HP ++ L    E         +EY    +L  +
Sbjct: 43  KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-GYLYLAIEYAPHGNLLDF 101

Query: 63  LKQHKTIAEREARCLSQPYLST----SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           L++ + +    A  ++    ST            V   + YL++     IH DL  
Sbjct: 102 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAA 155

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 8e-13
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 5/116 (4%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K +    ++      L E ++ K  +   VV+L  V          ++E     DL  YL
Sbjct: 56  KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-QPTLVIMELMTRGDLKSYL 114

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           +  +            P   +    +  ++   + YLN      +H DL     + 
Sbjct: 115 RSLRPAMANNPV--LAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMV 166

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 1e-12
 Identities = 17/106 (16%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
                + +  +  A +HP +  ++  F+    +   V+EY +G DL ++++         
Sbjct: 46  VECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSR 104

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                       A     +++  L++L+     +++ DLK    L 
Sbjct: 105 ------------ATFYAAEIILGLQFLHSKG--IVYRDLKLDNILL 136

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-12
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 14/99 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              + E  +   L HP++V+LY V   +    C V E+ +   L  YL+  + +   E  
Sbjct: 45  EDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        + + V   + YL E    VIH DL  
Sbjct: 104 -----------LGMCLDVCEGMAYLEE--ACVIHRDLAA 129

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 2e-12
 Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 15/101 (14%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             R ALRE  + + L HP ++ L D F    ++   V ++ +             +    
Sbjct: 43  INRTALREIKLLQELSHPNIIGLLDAFG-HKSNISLVFDFMETDLEVIIKDNSLVLTPSH 101

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            +              ++  +  L+YL++    ++H DLKP
Sbjct: 102 IKA------------YMLMTLQGLEYLHQ--HWILHRDLKP 128

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.3 bits (143), Expect = 3e-12
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
            H   E  +   + HP +++++  F+ DA     +++Y +G +L   L++ +      A+
Sbjct: 49  EHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK 107

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                           +V  AL+YL+     +I+ DLKP
Sbjct: 108 F------------YAAEVCLALEYLHS--KDIIYRDLKP 132

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 4e-12
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 8/121 (6%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62
           K+L ++         + E  + K +  H  ++ L             ++EY    +L  Y
Sbjct: 51  KMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREY 109

Query: 63  LKQHK----TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPL 118
           L+  +      +   +    +   S    S   QV   ++YL       IH DL     L
Sbjct: 110 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVL 167

Query: 119 F 119
            
Sbjct: 168 V 168

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 6e-12
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 22/107 (20%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVF-----EIDANSFCTVLEYCDG---HDLDFYLKQHK 67
           R   RE  I + LDH  +V+L   F     + D      VL+Y           Y +  +
Sbjct: 58  RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ 117

Query: 68  TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           T+     +              + Q+  +L Y++     + H D+KP
Sbjct: 118 TLPVIYVKL------------YMYQLFRSLAYIHSFG--ICHRDIKP 150

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 2e-11
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 21/121 (17%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFE-----IDANSFCTVLEYCDGHD 58
           KL     +  F + A RE  + K + H  V+ L DVF       D   F  V+ +     
Sbjct: 50  KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-- 107

Query: 59  LDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPL 118
               L +H+ + E   +             +V Q++  L+Y++       H DLKPG   
Sbjct: 108 DLGKLMKHEKLGEDRIQF------------LVYQMLKGLRYIHAAGII--HRDLKPGNLA 153

Query: 119 F 119
            
Sbjct: 154 V 154

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.4 bits (135), Expect = 3e-11
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K+     +   P   +RE +I K L H  +VKLYDV          V E+ D        
Sbjct: 33  KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-HTKKRLVLVFEHLDQDLKKLLD 91

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                +    A+              ++Q+++ + Y ++    V+H DLKP
Sbjct: 92  VCEGGLESVTAKS------------FLLQLLNGIAYCHD--RRVLHRDLKP 128

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 4e-11
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           +   ++          RE +I K + HP V+ L++V+E +      +LE   G +L  +L
Sbjct: 46  RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFL 104

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
            + +++ E EA               + Q+++ + YL+     + H+DLKP
Sbjct: 105 AEKESLTEEEATE------------FLKQILNGVYYLHS--LQIAHFDLKP 141

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.3 bits (135), Expect = 4e-11
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K L +       R  L E +I    DHP V+ L  V    +     + E+ +   LD +L
Sbjct: 60  KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-KSTPVMIITEFMENGSLDSFL 118

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           +Q+              +       ++  + + +KYL       +H DL     L 
Sbjct: 119 RQND-----------GQFTVIQLVGMLRGIAAGMKYLA--DMNYVHRDLAARNILV 161

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 5e-11
 Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 22/104 (21%)

Query: 20  REYNIHKALDHPRVVKLYDVFEIDANSF---CTVLEYCDGHDLDFYLKQHKTIAEREARC 76
            E      L H  ++        D  ++     V +Y +   L  YL ++    E   + 
Sbjct: 46  AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK- 104

Query: 77  LSQPYLSTSARSIVMQVVSALKYL------NEIKPPVIHYDLKP 114
                       + +   S L +L       + KP + H DLK 
Sbjct: 105 ------------LALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.0 bits (134), Expect = 5e-11
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 15/128 (11%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K+L    +        RE  +    D+P +VKL  V  +     C + EY    DL+ +L
Sbjct: 49  KMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-KPMCLLFEYMAYGDLNEFL 107

Query: 64  KQHK------------TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYD 111
           +               +   R +     P        I  QV + + YL+E     +H D
Sbjct: 108 RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRD 165

Query: 112 LKPGKPLF 119
           L     L 
Sbjct: 166 LATRNCLV 173

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 5e-11
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K+         P  A+RE ++ K L+HP +VKL DV     N    V E+       F  
Sbjct: 34  KIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLHQDLKKFMD 92

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
               T                  +S + Q++  L + +     V+H DLKP   L 
Sbjct: 93  ASALTGIPLPL-----------IKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLI 135

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 1e-10
 Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 17/112 (15%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDL-DFY 62
           K      +       L+E    +  DHP +VKL  V     N    ++E C   +L  F 
Sbjct: 41  KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFL 98

Query: 63  LKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             +  ++                      Q+ +AL YL       +H D+  
Sbjct: 99  QVRKYSLDLASLIL------------YAYQLSTALAYLES--KRFVHRDIAA 136

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.7 bits (131), Expect = 1e-10
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 13/99 (13%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              L+E  + K + HP +V+L  V       F  + E+    +L  YL++          
Sbjct: 58  EEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 116

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        +  Q+ SA++YL   K   IH DL  
Sbjct: 117 ----------LLYMATQISSAMEYLE--KKNFIHRDLAA 143

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-10
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 18/119 (15%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLD 60
             ++    LP       E  + K +      V++L D F    +SF  +LE  +   DL 
Sbjct: 40  DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF-ERPDSFVLILERPEPVQDLF 98

Query: 61  FYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            ++ +   + E              ARS   QV+ A+++ +     V+H D+K    L 
Sbjct: 99  DFITERGALQEEL------------ARSFFWQVLEAVRHCHNCG--VLHRDIKDENILI 143

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.5 bits (130), Expect = 2e-10
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 14/99 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
                E  I+K +     +        + +    V+E       D +    +  + +   
Sbjct: 47  PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVL 106

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        +  Q++S ++Y++      IH D+KP
Sbjct: 107 L------------LADQMISRIEYIHSKN--FIHRDVKP 131

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              +RE N   +LDH  +++LY V          V E      L   L++H+        
Sbjct: 56  DDFIREVNAMHSLDHRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQ-------- 105

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                +L  +     +QV   + YL       IH DL     L 
Sbjct: 106 ---GHFLLGTLSRYAVQVAEGMGYLES--KRFIHRDLAARNLLL 144

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-10
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 21/118 (17%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-------NSFCTVLEYCDG 56
           K+L  N    FP  ALRE  I + L H  VV L ++    A        S   V ++C+ 
Sbjct: 42  KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH 101

Query: 57  HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                           E             + ++  +++ L Y++  K  ++H D+K 
Sbjct: 102 DLAGLLSNVLVKFTLSE------------IKRVMQMLLNGLYYIHRNK--ILHRDMKA 145

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 3e-10
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
              + E  +   L H ++V+LY V          + EY     L  YL++ +   + +  
Sbjct: 44  DEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 102

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                        +   V  A++YL       +H DL  
Sbjct: 103 L-----------EMCKDVCEAMEYLE--SKQFLHRDLAA 128

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 4e-10
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K L    +    +  L E  +  ++D+P V +L  +     ++   + +      L  Y+
Sbjct: 44  KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYV 101

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           ++HK     +              +  +Q+   + YL      ++H DL  
Sbjct: 102 REHKDNIGSQYL-----------LNWCVQIAKGMNYLE--DRRLVHRDLAA 139

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 7e-10
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 20/120 (16%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDL 59
           K ++   +  + +  LRE  I     H  ++ + D+              V         
Sbjct: 39  KKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLY 98

Query: 60  DFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                QH +                     + Q++  LKY++     V+H DLKP   L 
Sbjct: 99  KLLKTQHLSNDH--------------ICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLL 142

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 9e-10
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
            H + E  + +   HP +  L   F+   +  C V+EY +G +L F+L + +   E  AR
Sbjct: 50  AHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERAR 108

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                           ++VSAL+YL+     V++ D+K 
Sbjct: 109 F------------YGAEIVSALEYLHS--RDVVYRDIKL 133

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 1e-09
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 15  PRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
           P   L+E  + K L H ++V+LY V   +      V EY     L  +LK       R  
Sbjct: 56  PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLP 113

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           +             +  Q+ S + Y+   +   +H DL+ 
Sbjct: 114 Q----------LVDMAAQIASGMAYVE--RMNYVHRDLRA 141

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 22/116 (18%), Positives = 34/116 (29%), Gaps = 13/116 (11%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K L    ++      L E  I K   HP V+ L  +      S   VL Y    DL  ++
Sbjct: 61  KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           +                          +QV   +K+        +H DL     + 
Sbjct: 121 RNET-----------HNPTVKDLIGFGLQVAKGMKF--LASKKFVHRDLAARNCML 163

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 2e-09
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 22/116 (18%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-----DANSFCTVLEYCDGHD 58
           KL     N    + A RE  + K ++H  ++ L +VF       +      V+E  D + 
Sbjct: 49  KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 108

Query: 59  LDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                 +                       ++ Q++  +K+L+      IH DLKP
Sbjct: 109 CQVIQMELD---------------HERMSYLLYQMLCGIKHLHSAGI--IHRDLKP 147

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 3e-09
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 16  RHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR 75
            H L E  I +A++ P +VKL      D ++   V+EY  G ++  +L++    +E  AR
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEF-SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144

Query: 76  CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
                           Q+V   +YL+ +   +I+ DLKP
Sbjct: 145 F------------YAAQIVLTFEYLHSLD--LIYRDLKP 169

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 4e-09
 Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 16/107 (14%)

Query: 14  FPRHALREYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAER 72
              H   E  + + +   P +V L+  F+        +L+Y +G +L  +L Q +   E 
Sbjct: 71  TTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEH 129

Query: 73  EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           E +              V ++V AL++L++    +I+ D+K    L 
Sbjct: 130 EVQI------------YVGEIVLALEHLHK--LGIIYRDIKLENILL 162

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 4e-09
 Identities = 22/116 (18%), Positives = 34/116 (29%), Gaps = 7/116 (6%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGHDLDFY 62
           K+L         R  + E  I   + H   VV L             ++E+C   +L  Y
Sbjct: 49  KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 108

Query: 63  LKQHKTIAEREARCLSQPYLST----SARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           L+  +             Y              QV   +++L       IH DL  
Sbjct: 109 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAA 162

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 1e-08
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 15/116 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           ++   + +   P  ALRE  + K L H  +V+L+DV          V E+CD     ++ 
Sbjct: 34  RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYFD 92

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
             +  +                 +S + Q++  L + +     V+H DLKP   L 
Sbjct: 93  SCNGDLDPEI------------VKSFLFQLLKGLGFCH--SRNVLHRDLKPQNLLI 134

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 2e-08
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 20/118 (16%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKAL---DHPRVVKLYDVFEIDA----NSFCTVLEYCDG 56
           ++         P   +RE  + + L   +HP VV+L+DV  +           V E+ D 
Sbjct: 40  RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 99

Query: 57  HDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
               +  K  +               + + + ++ Q++  L +L+  +  V+H DLKP
Sbjct: 100 DLTTYLDKVPE-----------PGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKP 144

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 47.5 bits (112), Expect = 5e-08
 Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 19/106 (17%)

Query: 16  RHALREYNIHKAL-DHPRVVKLYDVFE-IDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           +   RE  I + L   P ++ L D+ +   + +   V E+ +  D     + ++T+ + +
Sbjct: 74  KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFK---QLYQTLTDYD 130

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
            R              + +++ AL Y + +   ++H D+KP   + 
Sbjct: 131 IRF------------YMYEILKALDYCHSMG--IMHRDVKPHNVMI 162

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 3e-07
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           KL     ++   +   RE  + K + H  V+ L DVF                   D YL
Sbjct: 50  KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA---------RSLEEFNDVYL 100

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
             H   A+       Q       + ++ Q++  LKY++     +IH DLKP
Sbjct: 101 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKP 149

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 5e-07
 Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 14/116 (12%)

Query: 4   KLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYL 63
           K L            L E  I     H  +++L  V               +G    F  
Sbjct: 42  KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 101

Query: 64  KQHKTIAEREARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
           ++    +  +               ++  + + +KYL       +H DL     L 
Sbjct: 102 EKDGEFSVLQ------------LVGMLRGIAAGMKYLAN--MNYVHRDLAARNILV 143

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 42.5 bits (99), Expect = 2e-06
 Identities = 13/105 (12%), Positives = 34/105 (32%), Gaps = 16/105 (15%)

Query: 16  RHALREYNIHKALDHPR-VVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREA 74
                EY  +K L     +  +Y   + +      V++       D      +  + +  
Sbjct: 45  PQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT- 102

Query: 75  RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                            Q+++ ++ ++E    +++ D+KP   L 
Sbjct: 103 -----------VAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLI 134

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (86), Expect = 1e-04
 Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 4/104 (3%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
           +   A  E  + + ++     K   +             +   + +   +          
Sbjct: 52  YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL 111

Query: 74  ARCLSQPYLSTS---ARSIVMQVVSALKYLNEIKPPVIHYDLKP 114
           A      +        + I  Q++  L Y++  +  +IH D+KP
Sbjct: 112 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMH-RRCGIIHTDIKP 154

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 26/106 (24%)

Query: 14  FPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAERE 73
             R A  E+   + L    V K+Y            ++E  D  +L     ++       
Sbjct: 57  AIRSARNEFRALQKLQGLAVPKVYAWEG-----NAVLMELIDAKELYRVRVENP------ 105

Query: 74  ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLF 119
                          ++  ++  +         ++H DL     L 
Sbjct: 106 -------------DEVLDMILEEVAKFYH--RGIVHGDLSQYNVLV 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	122
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.95
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.95
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.95
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.94
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.94
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.93
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.93
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.93
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.93
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.93
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.93
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.93
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.93
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.92
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.91
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.91
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.9
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.9
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.9
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.9
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.9
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.88
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.85
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.68
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.64
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.62
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.05
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.66
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	90.61
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	89.7

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-30  Score=164.48  Aligned_cols=106  Identities=26%  Similarity=0.406  Sum_probs=88.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++........+.+.+|+.++++++||||+++++++. +.+.+++|||||++|+|.+++...+.            
T Consensus        33 vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~-~~~~~~ivmEy~~gg~L~~~l~~~~~------------   99 (271)
T d1nvra_          33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIEPDIG------------   99 (271)
T ss_dssp             EEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEGGGGSBTTTB------------
T ss_pred             EEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCceeEEEEeccCCCcHHHHHhcCCC------------
Confidence            69999987644445678899999999999999999999998 77889999999999999988865433            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       100 l~e~~~~~i~~qi~~al~ylH~~~--IiHrDiKp~NILl~~  138 (271)
T d1nvra_         100 MPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDE  138 (271)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC--CccCcccHHHEEECC
Confidence            455556999999999999999999  999999999999975

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-29  Score=163.95  Aligned_cols=106  Identities=25%  Similarity=0.416  Sum_probs=93.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|+++...++...+.+.+|+.+++.++||||++++++|. +.+.+++||||+.+|+|.+++...+.            
T Consensus        34 vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~iVmEy~~gg~L~~~l~~~~~------------  100 (322)
T d1s9ja_          34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGR------------  100 (322)
T ss_dssp             EEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE-CSSEEEEEEECCTTEEHHHHHHHHSS------------
T ss_pred             EEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCCcHHHHHhhcCC------------
Confidence            69999987766666788999999999999999999999998 77889999999999999999976543            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcC-CCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEI-KPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~-~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+. +  |+||||||+|||++.
T Consensus       101 l~~~~~~~~~~qil~aL~yLH~~~~--IiHRDiKP~NILl~~  140 (322)
T d1s9ja_         101 IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS  140 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC--EEccccCHHHeeECC
Confidence            44555699999999999999974 8  999999999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.4e-29  Score=158.44  Aligned_cols=106  Identities=25%  Similarity=0.305  Sum_probs=92.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++.+  ....+.+.+|+.++++++||||+++++++. +.+..+++||||++|+|..++.....          ..
T Consensus        45 vAvK~i~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~iv~E~~~~g~l~~~l~~~~~----------~~  111 (287)
T d1opja_          45 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNR----------QE  111 (287)
T ss_dssp             EEEEECCTT--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCT----------TT
T ss_pred             EEEEEECCc--cchHHHHHHHHHHHHhCCCCCEecCCccEe-eCCeeEEEeecccCcchHHHhhhccc----------cc
Confidence            699998866  335678999999999999999999999998 77788999999999999999875322          34


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       112 ~~~~~~~~i~~qi~~gL~yLH~~~--iiHrDlKp~NILl~~  150 (287)
T d1opja_         112 VSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGE  150 (287)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCC--cccCccccCeEEECC
Confidence            566677999999999999999999  999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-29  Score=158.70  Aligned_cols=106  Identities=25%  Similarity=0.380  Sum_probs=91.7

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|++.+.  .+....+.+.+|+.+++.++||||+++++++. +.+.+++|||||++|+|.+++...+.+         
T Consensus        34 vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~ivmEy~~~g~L~~~l~~~~~l---------  103 (263)
T d2j4za1          34 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVYLILEYAPLGTVYRELQKLSKF---------  103 (263)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSC---------
T ss_pred             EEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE-ECCEEEEEEeecCCCcHHHHHhhcCCC---------
Confidence            689988754  12345677899999999999999999999998 778899999999999999999865444         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       104 ---~e~~~~~i~~qi~~al~~lH~~~--ivHrDiKp~Nill~~  141 (263)
T d2j4za1         104 ---DEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGS  141 (263)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHCC--eeeeeeccccceecC
Confidence               44555999999999999999999  999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.7e-29  Score=158.39  Aligned_cols=106  Identities=31%  Similarity=0.528  Sum_probs=92.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++.. +....+.+.+|++++++++||||+++++++. +.+.+++|||||++|+|.+++....           ..
T Consensus        40 vAvK~i~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~lvmEy~~~g~L~~~~~~~~-----------~~  106 (288)
T d2jfla1          40 AAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELE-----------RP  106 (288)
T ss_dssp             EEEEEEECS-SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHHHHT-----------SC
T ss_pred             EEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-eCCeEEEEEecCCCCcHHHHHHhcC-----------CC
Confidence            689998765 3445678999999999999999999999998 7788999999999999999876532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       107 l~e~~~~~i~~qi~~gL~ylH~~~--ivHrDiKp~NIll~~  145 (288)
T d2jfla1         107 LTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTL  145 (288)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--EEEeecChhheeECC
Confidence            555666999999999999999999  999999999999975

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-28  Score=157.30  Aligned_cols=104  Identities=18%  Similarity=0.300  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++... ....+.+.+|++++++++||||+++++++. +.+.+++|||||++|+|.+++.. +            .
T Consensus        48 vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~ivmEy~~gg~L~~~~~~-~------------~  112 (293)
T d1yhwa1          48 VAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTE-T------------C  112 (293)
T ss_dssp             EEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHH-S------------C
T ss_pred             EEEEEEeccc-ChHHHHHHHHHHHHHhCCCCCEeeEeEEEE-ECCEEEEEEEecCCCcHHHHhhc-c------------C
Confidence            6899987653 334678999999999999999999999998 67889999999999999987754 2            3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       113 l~~~~~~~i~~qi~~aL~yLH~~~--iiHrDiKp~NILl~~  151 (293)
T d1yhwa1         113 MDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGM  151 (293)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--CcccCCcHHHeEECC
Confidence            455566999999999999999999  999999999999975

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.9e-29  Score=158.46  Aligned_cols=106  Identities=25%  Similarity=0.388  Sum_probs=91.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++........+.+.+|++++++++||||+++++++. + +.+++|||||++|+|.+++....           ..
T Consensus        39 vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~-~~~~lvmE~~~~g~L~~~l~~~~-----------~~  105 (285)
T d1u59a_          39 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-A-EALMLVMEMAGGGPLHKFLVGKR-----------EE  105 (285)
T ss_dssp             EEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-S-SSEEEEEECCTTEEHHHHHTTCT-----------TT
T ss_pred             EEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-c-CeEEEEEEeCCCCcHHHHhhccc-----------cC
Confidence            68999987755556788999999999999999999999986 3 45789999999999999876432           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       106 l~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~Nill~~  144 (285)
T d1u59a_         106 IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVN  144 (285)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--eecCcCchhheeecc
Confidence            566677999999999999999999  999999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=4.7e-29  Score=159.87  Aligned_cols=108  Identities=22%  Similarity=0.368  Sum_probs=93.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.+.........+.+.+|+.++++++||||+++++++. ..+.++++||||++|+|.+++....           ..
T Consensus        57 vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~~~~~iv~Ey~~~g~L~~~~~~~~-----------~~  124 (299)
T d1jpaa_          57 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-KSTPVMIITEFMENGSLDSFLRQND-----------GQ  124 (299)
T ss_dssp             EEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHTTT-----------TC
T ss_pred             EEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEe-eCCEEEEEEEecCCCcceeeecccc-----------CC
Confidence            57888876655556678999999999999999999999998 6778899999999999999887532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+|||++.+
T Consensus       125 l~~~~~~~i~~qia~gl~yLH~~~--iiHrDlKp~NILl~~~  164 (299)
T d1jpaa_         125 FTVIQLVGMLRGIAAGMKYLADMN--YVHRDLAARNILVNSN  164 (299)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC--CccCccccceEEECCC
Confidence            556667999999999999999999  9999999999999753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.1e-29  Score=157.04  Aligned_cols=105  Identities=27%  Similarity=0.433  Sum_probs=88.0

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... ++...+.+.+|+.++++++||||+++++++. + +..++||||+++|+|.+++.....           
T Consensus        37 vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~-~~~~lvmE~~~~g~L~~~l~~~~~-----------  103 (277)
T d1xbba_          37 VAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-A-ESWMLVMEMAELGPLNKYLQQNRH-----------  103 (277)
T ss_dssp             EEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-S-SSEEEEEECCTTEEHHHHHHHCTT-----------
T ss_pred             EEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-c-CCEEEEEEcCCCCcHHHHHhhccC-----------
Confidence            6899997653 3445678999999999999999999999986 4 456799999999999999876543           


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       +++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       104 -l~~~~~~~i~~qi~~gl~ylH~~~--iiHrDlKp~Nill~~  142 (277)
T d1xbba_         104 -VKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVT  142 (277)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEE
T ss_pred             -CCHHHHHHHHHHHHHHHhhHHhCC--cccCCCcchhhcccc
Confidence             455566999999999999999999  999999999999975

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.8e-29  Score=156.59  Aligned_cols=109  Identities=28%  Similarity=0.373  Sum_probs=90.9

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||+|.+... ......+.+.+|++++++++||||+++++++..   ....++++|||+++|+|.+++.....        
T Consensus        37 va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~--------  108 (270)
T d1t4ha_          37 VAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--------  108 (270)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS--------
T ss_pred             EEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcccc--------
Confidence            588988765 234456778999999999999999999999852   24568999999999999999986544        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          +.+..+..++.|++.|+.|||+.+++++||||||+|||++.
T Consensus       109 ----~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~  149 (270)
T d1t4ha_         109 ----MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG  149 (270)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC
Confidence                34445589999999999999998778999999999999963

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.9e-28  Score=155.15  Aligned_cols=106  Identities=25%  Similarity=0.447  Sum_probs=91.5

Q ss_pred             CeeeeccCCC-----CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-----NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++++..     .....+.+.+|+.++++++||||+++++++. +.+.+++|||||++|+|.+++...+.       
T Consensus        38 ~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~iv~E~~~gg~L~~~i~~~~~-------  109 (293)
T d1jksa_          38 YAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-NKTDVILILELVAGGELFDFLAEKES-------  109 (293)
T ss_dssp             EEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHHHHSS-------
T ss_pred             EEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCccccchhccccc-------
Confidence            6999987542     1224678899999999999999999999998 77889999999999999999986544       


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           +.+..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       110 -----l~~~~~~~~~~qi~~al~yLH~~~--ivHrDiKp~Nill~~  148 (293)
T d1jksa_         110 -----LTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLD  148 (293)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESC
T ss_pred             -----cchhHHHHHHHHHHHHHHhhhhcc--eeecccccceEEEec
Confidence                 445555999999999999999999  999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.2e-28  Score=158.41  Aligned_cols=105  Identities=23%  Similarity=0.422  Sum_probs=86.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.........+.+.+|+.++++++||||+++++++. +.+.+++|||||+||+|.+++...+.            
T Consensus        37 vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lvmE~~~gg~L~~~l~~~~~------------  103 (307)
T d1a06a_          37 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE-SGGHLYLIMQLVSGGELFDRIVEKGF------------  103 (307)
T ss_dssp             EEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHTCSC------------
T ss_pred             EEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEeccCCCcHHHhhhcccC------------
Confidence            69999987644444567889999999999999999999998 77889999999999999999976544            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +++..+..++.|++.|+.|||+.+  ++||||||+||+++
T Consensus       104 l~e~~~~~~~~qi~~al~ylH~~~--iiHrDiKp~Nil~~  141 (307)
T d1a06a_         104 YTERDASRLIFQVLDAVKYLHDLG--IVHRDLKPENLLYY  141 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEES
T ss_pred             CCHHHHHHHHHHHHHHHHhhhhce--eeeEEecccceeec
Confidence            455555999999999999999999  99999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1e-28  Score=157.50  Aligned_cols=106  Identities=31%  Similarity=0.420  Sum_probs=91.6

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++.+.  .++...+.+.+|++++++++||||+++++++. +.+.+|+||||+++|+|.+++...+.+         
T Consensus        36 vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-~~~~~~ivmEy~~gg~L~~~~~~~~~l---------  105 (288)
T d1uu3a_          36 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-DDEKLYFGLSYAKNGELLKYIRKIGSF---------  105 (288)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHHHHSSC---------
T ss_pred             EEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE-ECCEEEEEEEccCCCCHHHhhhccCCC---------
Confidence            689998754  12345678899999999999999999999998 778899999999999999988865544         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..++.++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       106 ---~e~~~~~~~~qi~~al~ylH~~~--iiHrDiKp~NIll~~  143 (288)
T d1uu3a_         106 ---DETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNE  143 (288)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             ---CHHHHHHHHHHHHHHHHhhcccc--EEcCcCCccccccCC
Confidence               44455999999999999999999  999999999999975

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.9e-28  Score=152.65  Aligned_cols=105  Identities=24%  Similarity=0.391  Sum_probs=91.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++.+  ....+.+.+|+.++++++||||+++++++. +.+..+++|||+++|+|.+++....           ..
T Consensus        32 vAvK~i~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~~lv~E~~~~g~L~~~l~~~~-----------~~   97 (263)
T d1sm2a_          32 VAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQR-----------GL   97 (263)
T ss_dssp             EEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTT-----------TC
T ss_pred             EEEEEECCC--cCcHHHHHHHHHHHHhcCCCCcccccceec-cCCceEEEEEecCCCcHHHHhhccc-----------cC
Confidence            699999865  334578999999999999999999999998 6677889999999999999886532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..++.++.|++.|+.|+|+.+  ++||||||+|||+++
T Consensus        98 ~~~~~~~~i~~qia~gl~~lH~~~--iiHrDlKp~Nill~~  136 (263)
T d1sm2a_          98 FAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGE  136 (263)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCTTCSGGGEEECG
T ss_pred             CCHHHHHHHHHHHHHHHHhhhccc--eeecccchhheeecC
Confidence            455666899999999999999999  999999999999985

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.1e-28  Score=158.79  Aligned_cols=106  Identities=21%  Similarity=0.340  Sum_probs=90.0

Q ss_pred             CeeeeccCCCCC--cchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNL--PFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||+++.....  ...+.+.+|+.++++++||||+++++++. +.+.++++||||.+|++..++...+           
T Consensus        43 vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~iv~E~~~~g~l~~~~~~~~-----------  110 (309)
T d1u5ra_          43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-REHTAWLVMEYCLGSASDLLEVHKK-----------  110 (309)
T ss_dssp             EEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHHHTS-----------
T ss_pred             EEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEE-ECCEEEEEEEecCCCchHHHHHhCC-----------
Confidence            699998866322  23467889999999999999999999998 6788999999999888876665433           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                       .+++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       111 -~l~e~~~~~i~~qi~~aL~yLH~~~--iiHrDiKp~NILl~~  150 (309)
T d1u5ra_         111 -PLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSE  150 (309)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEET
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEECC
Confidence             3555666999999999999999999  999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.4e-28  Score=154.31  Aligned_cols=106  Identities=18%  Similarity=0.257  Sum_probs=90.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++.. .+....+.+.+|+.++++++||||+++++++.  .+.++++||||++|+|.+++....           .
T Consensus        33 vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~-----------~   99 (276)
T d1uwha_          33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWCEGSSLYHHLHIIE-----------T   99 (276)
T ss_dssp             EEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEECCCEEEHHHHHHTSC-----------C
T ss_pred             EEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe--ccEEEEEEecCCCCCHHHHHhhcc-----------C
Confidence            699999765 34456688899999999999999999999875  355789999999999999987532           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       100 ~~~~~~~~~i~~qi~~gl~yLH~~~--ivHrDlKp~NiLl~~  139 (276)
T d1uwha_         100 KFEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHE  139 (276)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEET
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCC--EeccccCHHHEEEcC
Confidence            3556667999999999999999999  999999999999975

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5e-28  Score=156.36  Aligned_cols=105  Identities=20%  Similarity=0.300  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++..  ....+.+.+|+++++.++||||+++++++. +.+.+|+|||||.||+|.+++...+           ..
T Consensus        33 ~AiK~i~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~lvmE~~~gg~L~~~i~~~~-----------~~   98 (321)
T d1tkia_          33 YMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSA-----------FE   98 (321)
T ss_dssp             EEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEE-ETTEEEEEECCCCCCBHHHHHTSSS-----------CC
T ss_pred             EEEEEEcCC--cccHHHHHHHHHHHHhCCCCCCCeEEEEEE-ECCEEEEEEecCCCCcHHHHHHhcC-----------CC
Confidence            689999765  334466789999999999999999999998 7788999999999999999987532           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.++..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        99 l~e~~~~~i~~qi~~al~yLH~~~--iiHrDlKp~NIll~~  137 (321)
T d1tkia_          99 LNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQT  137 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC--CCcccccccceeecC
Confidence            556666999999999999999999  999999999999964

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=1.3e-27  Score=151.64  Aligned_cols=106  Identities=23%  Similarity=0.385  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCc--------chHHHHHHHHHHhhCC-CCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH
Q psy4991           1 MCAKLLTTNLNLP--------FPRHALREYNIHKALD-HPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE   71 (122)
Q Consensus         1 vavK~~~~~~~~~--------~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   71 (122)
                      ||||++++.....        ..+.+.+|+.++++++ ||||+++++++. +.+.+|++|||+++|+|.+++...+.   
T Consensus        31 ~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-~~~~~~ivmE~~~~g~L~~~l~~~~~---  106 (277)
T d1phka_          31 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTEKVT---  106 (277)
T ss_dssp             EEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSS---
T ss_pred             EEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc-cCcceEEEEEcCCCchHHHHHHhcCC---
Confidence            6899988653211        2346889999999996 999999999998 78899999999999999999986544   


Q ss_pred             HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                               +++..+..++.|++.|+.|||+++  ++||||||+||+++.
T Consensus       107 ---------l~e~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~  145 (277)
T d1phka_         107 ---------LSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDD  145 (277)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECT
T ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHcC--CcccccccceEEEcC
Confidence                     445555999999999999999999  999999999999975

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.6e-28  Score=157.36  Aligned_cols=106  Identities=26%  Similarity=0.402  Sum_probs=92.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++++..  .....+.+.+|+.++++++||||+.+++++. +.+.+|+|||||++|+|..++...+.+++.      
T Consensus        33 ~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~------  105 (337)
T d1o6la_          33 YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEE------  105 (337)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSCCCHH------
T ss_pred             EEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec-cccccccceeccCCCchhhhhhcccCCcHH------
Confidence            6899987641  2345677899999999999999999999999 788999999999999999998876554444      


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       106 ------~~~~~~~qil~al~ylH~~~--iiHRDlKP~NILl~~  140 (337)
T d1o6la_         106 ------RARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDK  140 (337)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ------HHHHHHHHHhhhhhhhhhcC--ccccccCHHHeEecC
Confidence                  44999999999999999999  999999999999975

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=154.97  Aligned_cols=118  Identities=19%  Similarity=0.263  Sum_probs=90.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch-hHH------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI-AER------   72 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~------   72 (122)
                      ||+|.+.........+.+.+|+.++.++ +||||+++++++. +.+.++++||||++|+|.+++...... ...      
T Consensus        70 vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~  148 (325)
T d1rjba_          70 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN  148 (325)
T ss_dssp             EEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHTTTTCC---------
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe-eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhcc
Confidence            5788887765566678899999999998 8999999999998 777889999999999999999764321 110      


Q ss_pred             ----hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 ----EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ........+.+..++.++.|++.|+.|||+.+  |+||||||+||+++.
T Consensus       149 ~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--IiHRDlKp~Nill~~  199 (325)
T d1rjba_         149 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTH  199 (325)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCSGGGEEEET
T ss_pred             ccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCchhcccccc
Confidence                01111235778889999999999999999999  999999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.7e-28  Score=153.18  Aligned_cols=114  Identities=25%  Similarity=0.310  Sum_probs=85.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||+|.+.... ++...+.+.+|++++++++||||+++++++.+ +.+.++++||||++|+|.+++.....        ..
T Consensus        32 vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~--------~~  103 (269)
T d2java1          32 LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK--------ER  103 (269)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHH--------HT
T ss_pred             EEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccc--------cC
Confidence            6899988763 34456778999999999999999999999862 34568999999999999999875321        12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCC---CCeeeeCCCCCCcccccC
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIK---PPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~---~~i~h~dlk~~nill~~~  122 (122)
                      ..+++..++.++.|++.|+.|||+.+   .+++||||||+|||++.+
T Consensus       104 ~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~  150 (269)
T d2java1         104 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK  150 (269)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC
Confidence            45677778999999999999999853   349999999999999753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=1.2e-27  Score=156.24  Aligned_cols=105  Identities=24%  Similarity=0.347  Sum_probs=90.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++... ....+.+.+|+.++++++||||+++++++. +.+.+++|||||++|+|.+.+...+           ..
T Consensus        57 vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~L~~~~~~~~-----------~~  123 (352)
T d1koba_          57 FVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAED-----------YK  123 (352)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTT-----------CC
T ss_pred             EEEEEECCcc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCChHHHHHHhcC-----------CC
Confidence            6899987652 234567889999999999999999999998 7788999999999999988765422           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       124 l~e~~~~~i~~qi~~aL~ylH~~~--iiHRDiKp~NILl~  161 (352)
T d1koba_         124 MSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCE  161 (352)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC--eeeccccccccccc
Confidence            566677999999999999999999  99999999999996

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=1.1e-27  Score=156.21  Aligned_cols=105  Identities=27%  Similarity=0.364  Sum_probs=90.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.... ....+.+.+|+.++++++||||+++++++. +.+.+++|||||++|+|.+++....           ..
T Consensus        54 vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~L~~~l~~~~-----------~~  120 (350)
T d1koaa2          54 FAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMSGGELFEKVADEH-----------NK  120 (350)
T ss_dssp             EEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHTCTT-----------SC
T ss_pred             EEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-ECCEEEEEEEcCCCCCHHHHHHhhc-----------CC
Confidence            6899987652 334677889999999999999999999998 7788999999999999999885421           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+|||++
T Consensus       121 l~e~~~~~i~~qi~~aL~ylH~~~--iiHrDiKp~NIll~  158 (350)
T d1koaa2         121 MSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFT  158 (350)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcC--CeeeeechhHeeec
Confidence            556666999999999999999999  99999999999995

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.1e-27  Score=154.52  Aligned_cols=106  Identities=25%  Similarity=0.415  Sum_probs=91.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++++.  ......+.+.+|+.+++.++||||+++++++. +.+.+++||||+.||++...+.........      
T Consensus        32 vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~------  104 (316)
T d1fota_          32 YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLRKSQRFPNP------  104 (316)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHTSSCCHH------
T ss_pred             EEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe-eCCeeeeEeeecCCcccccccccccccccc------
Confidence            689998754  22345678899999999999999999999998 788999999999999999988875544443      


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       105 ------~~~~~~~qi~~al~~lH~~~--iiHrDiKp~NILl~~  139 (316)
T d1fota_         105 ------VAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDK  139 (316)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECT
T ss_pred             ------HHHHHHHHHHHhhhhhccCc--EEccccCchheeEcC
Confidence                  44889999999999999999  999999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-27  Score=150.93  Aligned_cols=106  Identities=25%  Similarity=0.343  Sum_probs=89.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++..  ....+.+.+|+.++++++||||+++++++. + +..++||||+++|+|.+++.....          .+
T Consensus        40 vAvK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~-~~~~iv~Ey~~~g~L~~~~~~~~~----------~~  105 (272)
T d1qpca_          40 VAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-Q-EPIYIITEYMENGSLVDFLKTPSG----------IK  105 (272)
T ss_dssp             EEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEEECCTTCBHHHHTTSHHH----------HT
T ss_pred             EEEEEEccC--cCCHHHHHHHHHHHHhCCCCCEeEEEeeec-c-CCeEEEEEeCCCCcHHHHHhhcCC----------CC
Confidence            699999865  334578999999999999999999999876 3 456899999999999887654221          23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.+
T Consensus       106 l~~~~~~~i~~qi~~gl~~lH~~~--ivHrDiKp~NIll~~~  145 (272)
T d1qpca_         106 LTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDT  145 (272)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--cccCccchhheeeecc
Confidence            566777999999999999999999  9999999999999853

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=1.4e-27  Score=151.44  Aligned_cols=107  Identities=26%  Similarity=0.383  Sum_probs=89.7

Q ss_pred             CeeeeccCCCC--CcchHHHHHHHHHHhhCCCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLN--LPFPRHALREYNIHKALDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++....  +...+.+.+|+.+++.++||||+++++++..+.   ..+|+||||++|++|..++...+.+      
T Consensus        35 vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l------  108 (277)
T d1o6ya_          35 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------  108 (277)
T ss_dssp             EEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSC------
T ss_pred             EEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCC------
Confidence            69999987632  234567899999999999999999999986332   3488999999999999888765444      


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       109 ------~~~~~~~i~~qi~~al~~lH~~~--iiHrDiKP~NIll~~  146 (277)
T d1o6ya_         109 ------TPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISA  146 (277)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHhCC--ccCccccCcccccCc
Confidence                  44555999999999999999999  999999999999974

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.4e-27  Score=150.10  Aligned_cols=108  Identities=19%  Similarity=0.294  Sum_probs=93.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++....+.....+.+|+.++++++||||+++++++. +.+..++++||+.++++...+....           ..
T Consensus        39 vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~-~~~~~~~v~e~~~~~~l~~~~~~~~-----------~~  106 (283)
T d1mqba_          39 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-KYKPMMIITEYMENGALDKFLREKD-----------GE  106 (283)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSEEEEEECCTTEEHHHHHHHTT-----------TC
T ss_pred             EEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe-cCCceEEEEEecccCcchhhhhccc-----------cc
Confidence            68999987655555677899999999999999999999998 6778889999999999988776532           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.+
T Consensus       107 ~~~~~~~~i~~~i~~gl~~lH~~~--iiHrDlKp~NILl~~~  146 (283)
T d1mqba_         107 FSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSN  146 (283)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTT
T ss_pred             ccHHHHHHHHHHHHHhhhhccccc--cccCccccceEEECCC
Confidence            556667999999999999999999  9999999999999853

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.4e-27  Score=146.61  Aligned_cols=106  Identities=20%  Similarity=0.305  Sum_probs=91.5

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++.+  ....+.+.+|+.++++++||||+++++++. +.+.+++||||+++|++..++.....           .
T Consensus        31 vAvK~l~~~--~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~-~~~~~~iv~Ey~~~g~l~~~~~~~~~-----------~   96 (258)
T d1k2pa_          31 VAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQRPIFIITEYMANGCLLNYLREMRH-----------R   96 (258)
T ss_dssp             EEEEEEESS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEC-CSSSEEEEEECCTTEEHHHHHHSGGG-----------C
T ss_pred             EEEEEECcC--cCCHHHHHHHHHHHHhcCCCceeeEEEEEe-eCCceEEEEEccCCCcHHHhhhcccc-----------C
Confidence            689999876  334578999999999999999999999998 66788999999999999988765322           3


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      +.+..++.++.|++.|+.|||+.+  ++||||||+||+++++
T Consensus        97 ~~~~~~~~i~~qi~~gl~~LH~~~--iiH~dlk~~Nill~~~  136 (258)
T d1k2pa_          97 FQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQ  136 (258)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--BCCSCCSGGGEEECTT
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhcC--cccccccceeEEEcCC
Confidence            455666899999999999999999  9999999999999863

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-26  Score=148.53  Aligned_cols=118  Identities=19%  Similarity=0.231  Sum_probs=95.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccch----hHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTI----AEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~   75 (122)
                      ||||.++........+.+.+|+.+++++ +||||+++++++. +.+.+++||||+++|+|.+++......    ......
T Consensus        40 vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  118 (309)
T d1fvra_          40 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  118 (309)
T ss_dssp             EEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred             EEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe-cCCeeEEEEEecCCCcHHHHHhhccccccchhhhccc
Confidence            4788877665555678899999999998 7999999999998 778899999999999999999765432    122233


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+++..++.++.|++.|+.|+|+.+  ++||||||+|||++.
T Consensus       119 ~~~~~l~~~~~~~~~~qia~gl~~lH~~~--iiHrDlkp~NIL~~~  162 (309)
T d1fvra_         119 STASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGE  162 (309)
T ss_dssp             TBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECG
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHhhhcCC--ccccccccceEEEcC
Confidence            34467888999999999999999999999  999999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.3e-26  Score=151.24  Aligned_cols=106  Identities=29%  Similarity=0.404  Sum_probs=91.5

Q ss_pred             CeeeeccCC--CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTN--LNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++.+.  ......+.+.+|+.+++.++||||+++++++. +....++++||+.+|+|...+...+.+         
T Consensus        69 ~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~~v~e~~~~g~l~~~l~~~~~l---------  138 (350)
T d1rdqe_          69 YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLRRIGRF---------  138 (350)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHCCC---------
T ss_pred             EEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc-cccccccccccccccchhhhHhhcCCC---------
Confidence            689998754  23345678899999999999999999999998 778889999999999999998875544         


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       139 ---~e~~~~~i~~qi~~aL~yLH~~~--iiHRDIKP~NILl~~  176 (350)
T d1rdqe_         139 ---SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQ  176 (350)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCC--EecCcCCHHHcccCC
Confidence               44455999999999999999999  999999999999975

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3e-26  Score=147.41  Aligned_cols=108  Identities=22%  Similarity=0.243  Sum_probs=92.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++...+....+++.+|++++++++||||+++++++.......++|||||++|+|.+++....           ..
T Consensus        58 vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~-----------~~  126 (311)
T d1r0pa_          58 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-----------HN  126 (311)
T ss_dssp             EEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTT-----------CC
T ss_pred             EEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhcccc-----------cc
Confidence            5899998655555678899999999999999999999998746678899999999999999887432           23


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+..+..++.|++.|+.|+|+.+  ++||||||+|||+++
T Consensus       127 ~~~~~~~~i~~qia~gL~~lH~~~--iiHrDLK~~NILl~~  165 (311)
T d1r0pa_         127 PTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDE  165 (311)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             chHHHHHHHHHHHHHhhhhhcccC--cccCCccHHhEeECC
Confidence            344556899999999999999999  999999999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.9e-27  Score=147.01  Aligned_cols=106  Identities=21%  Similarity=0.274  Sum_probs=88.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++..   ...+.+.+|++++++++||||+++++++..+.+.+++||||+++|+|.+++.....          ..
T Consensus        33 vAvK~i~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----------~~   99 (262)
T d1byga_          33 VAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR----------SV   99 (262)
T ss_dssp             EEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH----------HH
T ss_pred             EEEEEECcH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCC----------CC
Confidence            699999754   34578999999999999999999999986455668999999999999999975322          12


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       100 l~~~~~~~i~~~i~~al~ylH~~~--ivH~dlkp~Nil~~~  138 (262)
T d1byga_         100 LGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSE  138 (262)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHhhccccccCc--eeccccchHhheecC
Confidence            455666999999999999999999  999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3e-26  Score=146.65  Aligned_cols=107  Identities=27%  Similarity=0.436  Sum_probs=86.4

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... .+...+.+.+|++++++++||||+++++++. +.+..+++|||+. +++..++....          ..
T Consensus        30 vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~-~~~~~~iv~e~~~-~~~~~~~~~~~----------~~   97 (298)
T d1gz8a_          30 VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-TENKLYLVFEFLH-QDLKKFMDASA----------LT   97 (298)
T ss_dssp             EEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-ETTEEEEEEECCS-EEHHHHHHHTT----------TT
T ss_pred             EEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccc-cccceeEEEeecC-Cchhhhhhhhc----------cc
Confidence            6999997653 3345688999999999999999999999998 7788999999997 55555554321          13


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus        98 ~l~e~~~~~~~~qil~~L~yLH~~~--IiHrDiKpeNIl~~~  137 (298)
T d1gz8a_          98 GIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINT  137 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC--EEccccCchheeecc
Confidence            4566777999999999999999999  999999999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=146.39  Aligned_cols=105  Identities=24%  Similarity=0.333  Sum_probs=89.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++..  ....+.+.+|+.++++++|+||+++++++. + +..++||||+.+|+|..++.....          ..
T Consensus        44 vAiK~l~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~-~~~~lv~Ey~~~g~l~~~~~~~~~----------~~  109 (285)
T d1fmka3          44 VAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E-EPIYIVTEYMSKGSLLDFLKGETG----------KY  109 (285)
T ss_dssp             EEEEECCTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEECCCTTCBHHHHHSHHHH----------TT
T ss_pred             EEEEEECcc--cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-c-CCeEEEEEecCCCchhhhhhhccc----------cc
Confidence            699999765  334578999999999999999999999986 4 456799999999999888764321          24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+.+++.++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       110 l~~~~~~~i~~~i~~gl~~LH~~~--ivH~DlKp~NIll~~  148 (285)
T d1fmka3         110 LRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE  148 (285)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhh--eecccccceEEEECC
Confidence            566777999999999999999999  999999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-26  Score=147.56  Aligned_cols=118  Identities=19%  Similarity=0.284  Sum_probs=96.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||||+++.+........+.+|...+.++ +||||++++++|. +.+..+++|||+.+|+|.+++.......    .....
T Consensus        48 vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~-~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~  126 (299)
T d1fgka_          48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH  126 (299)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEECCCTTCBHHHHHHTTSCC----------
T ss_pred             EEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc-cCCeEEEEEEccCCCcHHHHHHhhcCCcccccccccc
Confidence            5899998776555667888999999888 8999999999998 6677899999999999999998654311    11122


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       127 ~~~~~l~~~~~~~~~~qi~~al~ylH~~~--ivHrDiKp~NiLl~~  170 (299)
T d1fgka_         127 NPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTE  170 (299)
T ss_dssp             --CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECT
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHhhhCC--EEeeeecccceeecC
Confidence            22356788899999999999999999999  999999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.4e-26  Score=148.42  Aligned_cols=106  Identities=19%  Similarity=0.288  Sum_probs=89.6

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHh-hCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhc
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHK-ALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCL   77 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~-~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   77 (122)
                      ||||++++..  .....+.+.+|..++. .++||||+++++++. +.+.+|+||||+++|+|.+++.....+        
T Consensus        30 vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-~~~~~yivmEy~~~g~L~~~i~~~~~~--------  100 (320)
T d1xjda_          30 FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKF--------  100 (320)
T ss_dssp             EEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHHHHSSC--------
T ss_pred             EEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc-cCCceeEEEeecCCCcHHHHhhccCCC--------
Confidence            6999997541  2345567778887765 689999999999998 778899999999999999999875544        


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          78 SQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        78 ~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ++..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       101 ----~e~~~~~~~~qi~~al~ylH~~~--iiHrDikp~NiL~~~  138 (320)
T d1xjda_         101 ----DLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDK  138 (320)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECT
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHhCC--eeeccCcccceeecC
Confidence                44455999999999999999999  999999999999975

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=147.99  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=96.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH------Hh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE------RE   73 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~------~~   73 (122)
                      ||||+++..........+.+|+.+++.+ +||||+++++++. +....+++||||++|+|..++........      ..
T Consensus        56 vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~-~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~  134 (311)
T d1t46a_          56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI  134 (311)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC---------
T ss_pred             EEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe-eCCEEEEEEEcCCCCCHHHHHHhcccccccccccccc
Confidence            6899998775555677889999999999 7999999999998 67778999999999999999986543111      11


Q ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          74 ARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .......+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus       135 ~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~--ivHrDLKp~NIl~~~  180 (311)
T d1t46a_         135 MEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTH  180 (311)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEET
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccccccccccc
Confidence            1122345778899999999999999999999  999999999999975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.6e-27  Score=149.43  Aligned_cols=106  Identities=21%  Similarity=0.343  Sum_probs=83.9

Q ss_pred             CeeeeccCCCC----CcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLN----LPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||+++....    +...+.+.+|+.++++++||||+++++++. +.+.+++||||+.++++..+....          
T Consensus        26 vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~-~~~~~~ivmE~~~~~~~~~~~~~~----------   94 (299)
T d1ua2a_          26 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-HKSNISLVFDFMETDLEVIIKDNS----------   94 (299)
T ss_dssp             EEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC-CTTCCEEEEECCSEEHHHHHTTCC----------
T ss_pred             EEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCceeehhhhhcchHHhhhhhcc----------
Confidence            69999876521    223567899999999999999999999998 777899999999866655444322          


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+.+..+..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus        95 --~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDiKp~NIli~~  135 (299)
T d1ua2a_          95 --LVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDE  135 (299)
T ss_dssp             --SSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             --cCCCHHHHHHHHHHHHHHHHHhhccc--eecccCCcceEEecC
Confidence              34555666999999999999999999  999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.3e-26  Score=144.86  Aligned_cols=106  Identities=24%  Similarity=0.306  Sum_probs=89.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||.++........+.+.+|+.++++++||||+++++++.  .+.++++|||+.+|++..++....           ..
T Consensus        38 vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~iv~E~~~~g~l~~~~~~~~-----------~~  104 (273)
T d1mp8a_          38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRK-----------YS  104 (273)
T ss_dssp             EEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEEEEECCTTEEHHHHHHHTT-----------TT
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCeEEEEEEeccCCcHHhhhhccC-----------CC
Confidence            57788766544555678999999999999999999999986  356789999999999998876532           24


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.|+.|||+.+  ++||||||+||++++
T Consensus       105 l~~~~~~~~~~qi~~gl~ylH~~~--iiHrDlKp~NIll~~  143 (273)
T d1mp8a_         105 LDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSS  143 (273)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhhhhcccC--eeccccchhheeecC
Confidence            556667999999999999999999  999999999999975

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.8e-26  Score=143.45  Aligned_cols=106  Identities=25%  Similarity=0.322  Sum_probs=85.3

Q ss_pred             CeeeeccCCC--CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNL--NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||++++..  +....+.+.+|+.++++++||||+++++++. + ...++++||+.+|++.+.+....           
T Consensus        39 vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~-~-~~~~lv~e~~~~~~l~~~~~~~~-----------  105 (273)
T d1u46a_          39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-T-PPMKMVTELAPLGSLLDRLRKHQ-----------  105 (273)
T ss_dssp             EEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S-SSCEEEEECCTTCBHHHHHHHHG-----------
T ss_pred             EEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-e-cchheeeeeecCcchhhhhhccc-----------
Confidence            5899888652  3334578899999999999999999999997 4 35679999999999988776532           


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.|+.|||+++  ++||||||+||+++.
T Consensus       106 ~~l~~~~~~~~~~qi~~gl~ylH~~~--iiHrDikp~NIll~~  146 (273)
T d1u46a_         106 GHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLAT  146 (273)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhCC--EeeeeecHHHhcccc
Confidence            23455666999999999999999999  999999999999975

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6e-26  Score=145.83  Aligned_cols=116  Identities=18%  Similarity=0.255  Sum_probs=95.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||+++..........+.+|+.++++++||||+.+++++. ..+..+++|||+.+|+|.+++...........  ....
T Consensus        53 VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~--~~~~  129 (308)
T d1p4oa_          53 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-QGQPTLVIMELMTRGDLKSYLRSLRPAMANNP--VLAP  129 (308)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCT--TCCC
T ss_pred             EEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe-cCCceeEEEeecCCCCHHHHHHhccccccccc--ccCC
Confidence            69999987654555667899999999999999999999998 66778899999999999999876433211111  2234


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       130 ~~~~~~~~i~~~ia~gl~~LH~~~--ivHrDlk~~NiLld~  168 (308)
T d1p4oa_         130 PSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAE  168 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCC--eeeceEcCCceeecC
Confidence            567788999999999999999999  999999999999975

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-25  Score=144.07  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=87.1

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||+|.++...+....+.+.+|+.++++++||||+++++++. +. ..++++|++.+|+|.+.+....           ..
T Consensus        41 vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~-~~-~~~~v~e~~~~~~l~~~~~~~~-----------~~  107 (317)
T d1xkka_          41 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TS-TVQLITQLMPFGCLLDYVREHK-----------DN  107 (317)
T ss_dssp             EEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEE-SS-SEEEEEECCTTCBHHHHHHHTS-----------SS
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC-CeeEEEEeccCCcccccccccc-----------cC
Confidence            57788876655566788999999999999999999999997 43 4567889999999988876532           34


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       108 ~~~~~~~~i~~qi~~gl~yLH~~~--iiHrDlKp~NIll~~  146 (317)
T d1xkka_         108 IGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKT  146 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcC--cccCcchhhcceeCC
Confidence            556667999999999999999999  999999999999975

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=9.7e-26  Score=144.43  Aligned_cols=118  Identities=25%  Similarity=0.339  Sum_probs=95.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhH---------
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAE---------   71 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---------   71 (122)
                      ||||+++........+.+.+|+++++.++||||+.+++++. +....++++||+.+|+|.+++........         
T Consensus        46 vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  124 (301)
T d1lufa_          46 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS  124 (301)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHTCC------------
T ss_pred             EEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec-cCCceEEEEEecCCCcHHHHHHhcCccccccccccccc
Confidence            68999987655556678999999999999999999999998 67788899999999999999976432111         


Q ss_pred             ---HhhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          72 ---REARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        72 ---~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .........+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       125 ~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~--ivHrDlKp~NILld~  175 (301)
T d1lufa_         125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGE  175 (301)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred             hhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC--eEeeEEcccceEECC
Confidence               011111234778889999999999999999999  999999999999985

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.9e-26  Score=147.32  Aligned_cols=103  Identities=27%  Similarity=0.450  Sum_probs=85.4

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeee---CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI---DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||+++..      ..+.+|+.++.++ +||||++++++|.+   ....+|++||||+||+|.+++...+.        
T Consensus        40 vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~--------  105 (335)
T d2ozaa1          40 FALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--------  105 (335)
T ss_dssp             EEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSC--------
T ss_pred             EEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCC--------
Confidence            689988643      5677899987655 89999999999862   24568999999999999999975321        


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        ..+++.++..++.|++.|+.|||+.+  ++||||||+|||+++
T Consensus       106 --~~l~e~~~~~i~~qi~~al~ylH~~~--iiHRDiKp~NIll~~  146 (335)
T d2ozaa1         106 --QAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTS  146 (335)
T ss_dssp             --CCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESC
T ss_pred             --CCcCHHHHHHHHHHHHHHHHHHHHcC--Ccccccccccccccc
Confidence              24556666999999999999999999  999999999999974

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=7.3e-26  Score=148.29  Aligned_cols=106  Identities=22%  Similarity=0.258  Sum_probs=85.1

Q ss_pred             CeeeeccCCC--CCcchHHHHH---HHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL--NLPFPRHALR---EYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~--~~~~~~~~~~---e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++.+..  .......+.+   ++.+++.++||||+.+++++. +.+.+|+||||+.+|+|.+++.....+      
T Consensus        32 vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~-~~~~~~ivmE~~~gg~L~~~l~~~~~~------  104 (364)
T d1omwa3          32 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-TPDKLSFILDLMNGGDLHYHLSQHGVF------  104 (364)
T ss_dssp             EEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHCSC------
T ss_pred             EEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEE-ECCEEEEEEEecCCCcHHHHHHhcccc------
Confidence            6899886431  1112233334   466777788999999999998 778899999999999999999865444      


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            .+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       105 ------~e~~~~~~~~qi~~aL~ylH~~~--iiHrDlKP~NILl~~  142 (364)
T d1omwa3         105 ------SEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDE  142 (364)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECS
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHCC--ccceeeccceeEEcC
Confidence                  34455999999999999999999  999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=143.68  Aligned_cols=119  Identities=19%  Similarity=0.250  Sum_probs=90.7

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchh----HHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIA----EREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~   75 (122)
                      ||||.++........+.+.+|...+.++ +|+||+.+++++..+...++++||||++|+|.+++.......    .....
T Consensus        46 vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  125 (299)
T d1ywna1          46 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  125 (299)
T ss_dssp             EEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred             EEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence            6899988765555567788888888777 789999999998756667899999999999999998654311    11111


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+.+..+..++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       126 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~--ivHrDlKp~NILl~~  169 (299)
T d1ywna1         126 LYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSE  169 (299)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECG
T ss_pred             hhcccCCHHHHHHHHHHHHHHHHHHHhCC--CcCCcCCccceeECC
Confidence            12345778889999999999999999999  999999999999975

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=6.9e-26  Score=144.11  Aligned_cols=107  Identities=27%  Similarity=0.388  Sum_probs=88.8

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... .+...+.+.+|+.++++++||||+++++++. +.+..++++|++.++.+..+....+            
T Consensus        29 vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-~~~~~~i~~e~~~~~~~~~~~~~~~------------   95 (286)
T d1ob3a_          29 FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-TKKRLVLVFEHLDQDLKKLLDVCEG------------   95 (286)
T ss_dssp             EEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-CSSCEEEEEECCSEEHHHHHHTSTT------------
T ss_pred             EEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecc-cCCceeEEEEeehhhhHHHHHhhcC------------
Confidence            6999997652 3345688999999999999999999999998 7788899999998665555544333            


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                      .+++..++.++.|++.|+.|||+.+  |+||||||+|||++.+
T Consensus        96 ~l~~~~~~~i~~qi~~~L~~LH~~~--IvHrDiKp~NIll~~~  136 (286)
T d1ob3a_          96 GLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINRE  136 (286)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTT
T ss_pred             CcchhhhHHHHHHHHHHHHHhccCc--EEecCCCCceeeEcCC
Confidence            4555666999999999999999999  9999999999999753

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.1e-25  Score=139.54  Aligned_cols=106  Identities=25%  Similarity=0.407  Sum_probs=90.5

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++... .+...+.+.+|+.+++.++||||+.+++++. +....+++++++.++++..++...+..          
T Consensus        30 vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-~~~~~~iv~~~~~~~~l~~~~~~~~~~----------   98 (292)
T d1unla_          30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYFDSCNGDL----------   98 (292)
T ss_dssp             EEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-CSSEEEEEEECCSEEHHHHHHHTTTCC----------
T ss_pred             EEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc-cccceeEEeeecccccccccccccccc----------
Confidence            6999997653 3445688899999999999999999999998 778889999999988888777654443          


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                        .+..+..++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus        99 --~~~~~~~~~~q~~~aL~~lH~~~--IvHrDiKP~NIli~~  136 (292)
T d1unla_          99 --DPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINR  136 (292)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECT
T ss_pred             --chhHHHHHHHHHHHHHHHhhcCC--EeeecccCccccccc
Confidence              44455999999999999999999  999999999999974

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=141.38  Aligned_cols=105  Identities=23%  Similarity=0.332  Sum_probs=85.8

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC----CeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA----NSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||++.+.......+.+++|+.++++++||||+++++++....    ...+++ +++.+|+|.+++...          
T Consensus        36 vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~-~~~~~g~L~~~l~~~----------  104 (345)
T d1pmea_          36 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQ----------  104 (345)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE-EECCCEEHHHHHHHC----------
T ss_pred             EEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE-EeecCCchhhhhhcC----------
Confidence            69999986644455678899999999999999999999986221    235554 556679999998742          


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         .+++..+..++.|++.|+.|||+++  ++||||||+|||++.
T Consensus       105 ---~l~~~~i~~i~~qil~al~yLH~~~--iiHRDIKp~NILl~~  144 (345)
T d1pmea_         105 ---HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNT  144 (345)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCcceEEECC
Confidence               3556666999999999999999999  999999999999975

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.6e-24  Score=139.30  Aligned_cols=105  Identities=29%  Similarity=0.448  Sum_probs=86.1

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeCC-----CeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEIDA-----NSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++... ++...+.+.+|+.+|+.++||||++++++|....     ..++++|||+. ++|..+.+. .       
T Consensus        46 vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~-------  116 (346)
T d1cm8a_          46 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKH-E-------  116 (346)
T ss_dssp             EEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS-EEHHHHHHH-C-------
T ss_pred             EEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEeccc-ccHHHHHHh-c-------
Confidence            6999998653 3345678899999999999999999999996222     25789999994 677776653 2       


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           .+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       117 -----~l~~~~~~~~~~qi~~aL~~LH~~~--IiHrDiKp~NIL~~~  156 (346)
T d1cm8a_         117 -----KLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNE  156 (346)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             -----cccHHHHHHHHHHHHHHHHHHHhCC--CcccccCcchhhccc
Confidence                 3555666999999999999999999  999999999999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.4e-24  Score=137.31  Aligned_cols=106  Identities=25%  Similarity=0.303  Sum_probs=86.2

Q ss_pred             CeeeeccCCCCC-----cchHHHHHHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCC-CCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTNLNL-----PFPRHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDG-HDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~~~~-----~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~   72 (122)
                      ||||++++....     .....+.+|+.++++++  ||||+++++++. +.+..+++||++.+ +++..++.....    
T Consensus        32 vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~-~~~~~~lv~e~~~~~~~l~~~~~~~~~----  106 (273)
T d1xwsa_          32 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-RPDSFVLILERPEPVQDLFDFITERGA----  106 (273)
T ss_dssp             EEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-CSSEEEEEEECCSSEEEHHHHHHHHCS----
T ss_pred             EEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe-eCCeEEEEEEeccCcchHHHHHhccCC----
Confidence            689988764211     12345678999999986  899999999998 77889999999975 577777776444    


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                              +.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       107 --------l~e~~~~~~~~qi~~al~~lH~~~--iiHrDiKp~NIll~~  145 (273)
T d1xwsa_         107 --------LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDL  145 (273)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEET
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHCC--CccccCcccceEEec
Confidence                    444555999999999999999999  999999999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.5e-24  Score=136.34  Aligned_cols=107  Identities=21%  Similarity=0.370  Sum_probs=82.7

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhCCCCCccceeeeeeeC-------CCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKALDHPRVVKLYDVFEID-------ANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||||++... ..+...+++.+|+.++++++|+|++.+++++...       ...++++||++.++.+.......      
T Consensus        38 vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~------  111 (318)
T d3blha1          38 VALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------  111 (318)
T ss_dssp             EEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTT------
T ss_pred             EEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcc------
Confidence            699998765 3444668899999999999999999999998522       34588999999865554332222      


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                            ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       112 ------~~~~~~~~~~i~~qil~~l~~lH~~~--ivHrDlKp~NILl~~  152 (318)
T d3blha1         112 ------VKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITR  152 (318)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECT
T ss_pred             ------cccccHHHHHHHHHHHHHHHHhccCC--EEecCcCchheeecC
Confidence                  34455666899999999999999999  999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-23  Score=136.63  Aligned_cols=105  Identities=22%  Similarity=0.268  Sum_probs=81.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||++.....     ...+|++++++++|+||++++++|..     +...++++||||+++ +...+....        
T Consensus        48 vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~-~~~~l~~~~--------  113 (350)
T d1q5ka_          48 VAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYS--------  113 (350)
T ss_dssp             EEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEE-HHHHHHHHH--------
T ss_pred             EEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCc-cHHHHHhhh--------
Confidence            68999876521     22379999999999999999999852     233578999999854 444443210        


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .....+++..++.++.|++.|+.|||+.+  |+||||||+|||++.
T Consensus       114 ~~~~~l~~~~~~~i~~qil~aL~yLH~~~--IiHrDiKp~NILl~~  157 (350)
T d1q5ka_         114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDP  157 (350)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECT
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHhcC--CcccCCCcceEEEec
Confidence            11245677777999999999999999999  999999999999974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.7e-24  Score=138.74  Aligned_cols=106  Identities=25%  Similarity=0.364  Sum_probs=85.3

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeeeC----CCeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEID----ANSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++... +....+.+.+|+++++.++|+|++++++++...    ....+++++++.+|+|.+++..          
T Consensus        46 vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~----------  115 (348)
T d2gfsa1          46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC----------  115 (348)
T ss_dssp             EEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT----------
T ss_pred             EEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc----------
Confidence            6999998663 233556788999999999999999999998521    1223456677778999998853          


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                         ..+.+..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       116 ---~~l~e~~~~~i~~qil~aL~~LH~~g--iiHrDiKp~NILi~~  156 (348)
T d2gfsa1         116 ---QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNE  156 (348)
T ss_dssp             ---CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             ---ccccHHHHHHHHHHHHHHHHHHHhCC--CcccccCCccccccc
Confidence               23566667999999999999999999  999999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-24  Score=140.01  Aligned_cols=107  Identities=23%  Similarity=0.313  Sum_probs=90.1

Q ss_pred             CeeeeccCCC---CCcchHHHHHHHHHHhhCCC-CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhh
Q psy4991           1 MCAKLLTTNL---NLPFPRHALREYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARC   76 (122)
Q Consensus         1 vavK~~~~~~---~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~   76 (122)
                      ||||+++...   +....+.+.+|+.++++++| |||+++++++. +...+++++||+.+|+|.+++...+......   
T Consensus        55 vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~-~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~---  130 (322)
T d1vzoa_          55 YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-TETKLHLILDYINGGELFTHLSQRERFTEHE---  130 (322)
T ss_dssp             EEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE-ETTEEEEEECCCCSCBHHHHHHHHSCCCHHH---
T ss_pred             EEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec-cCCceeeeeecccccHHHHHHHhcccccHHH---
Confidence            6899887541   22345778899999999966 89999999998 7788999999999999999998765544444   


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccccC
Q psy4991          77 LSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        77 ~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~~  122 (122)
                               +..++.|++.|+.|+|+.+  ++||||||+||+++.+
T Consensus       131 ---------~~~~~~Qi~~al~~lH~~~--ivHrDiKp~Nill~~~  165 (322)
T d1vzoa_         131 ---------VQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSN  165 (322)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTT
T ss_pred             ---------HHHHHHHHHHHHHHhhcCC--EEeccCCccceeecCC
Confidence                     4889999999999999999  9999999999999753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.89  E-value=1.1e-23  Score=136.15  Aligned_cols=100  Identities=21%  Similarity=0.335  Sum_probs=84.0

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhC-CCCCccceeeeeee-CCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKAL-DHPRVVKLYDVFEI-DANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLS   78 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~   78 (122)
                      ||||+++..    ..+.+.+|+++++.+ .||||+++++++.. ....++++|||+.+++|....               
T Consensus        63 vAiK~i~~~----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---------------  123 (328)
T d3bqca1          63 VVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---------------  123 (328)
T ss_dssp             EEEEEECSS----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---------------
T ss_pred             EEEEEECHH----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---------------
Confidence            699998754    357789999999999 59999999999863 335688999999999886542               


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          79 QPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        79 ~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      ..+.+..++.++.|++.||.|||+.+  |+||||||+|||++.
T Consensus       124 ~~l~e~~i~~i~~qil~aL~~LH~~g--IvHrDiKp~NILi~~  164 (328)
T d3bqca1         124 QTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDH  164 (328)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEET
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcc--cccccccccceEEcC
Confidence            23556667999999999999999999  999999999999974

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=134.45  Aligned_cols=105  Identities=22%  Similarity=0.255  Sum_probs=81.6

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHH--hhCCCCCccceeeeeeeCC---CeEEEEEeccCCCCHHHHHHhccchhHHhhh
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIH--KALDHPRVVKLYDVFEIDA---NSFCTVLEYCDGHDLDFYLKQHKTIAEREAR   75 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l--~~~~h~~i~~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   75 (122)
                      ||||+++..    ..+.+.+|.+++  .+++||||+++++++.++.   ..+++||||+.+|+|..++...         
T Consensus        29 vAvK~~~~~----~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---------   95 (303)
T d1vjya_          29 VAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---------   95 (303)
T ss_dssp             EEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC---------
T ss_pred             EEEEEECcc----chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC---------
Confidence            689988754    234455555544  5679999999999996333   2688999999999999999752         


Q ss_pred             hcCCCCChHHHHHHHHHHHHHHHHHHcC------CCCeeeeCCCCCCcccccC
Q psy4991          76 CLSQPYLSTSARSIVMQVVSALKYLNEI------KPPVIHYDLKPGKPLFLFA  122 (122)
Q Consensus        76 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~------~~~i~h~dlk~~nill~~~  122 (122)
                          .+++..++.++.|++.|+.|+|+.      ..+|+||||||+|||++.+
T Consensus        96 ----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~  144 (303)
T d1vjya_          96 ----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC
Confidence                345566689999999999999973      1239999999999999753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.2e-23  Score=132.65  Aligned_cols=108  Identities=24%  Similarity=0.400  Sum_probs=82.5

Q ss_pred             CeeeeccCC-CCCcchHHHHHHHHHHhhC---CCCCccceeeeeee----CCCeEEEEEeccCCCCHHHHHHhccchhHH
Q psy4991           1 MCAKLLTTN-LNLPFPRHALREYNIHKAL---DHPRVVKLYDVFEI----DANSFCTVLEYCDGHDLDFYLKQHKTIAER   72 (122)
Q Consensus         1 vavK~~~~~-~~~~~~~~~~~e~~~l~~~---~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~   72 (122)
                      ||||+++.. ..+.....+.+|+.+++.+   +||||++++++|..    .....++++|++.++.+.......      
T Consensus        36 vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~------  109 (305)
T d1blxa_          36 VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP------  109 (305)
T ss_dssp             EEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSC------
T ss_pred             EEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhcc------
Confidence            689998765 2334456677888877665   79999999999852    234688999999866554333221      


Q ss_pred             hhhhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          73 EARCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                           ...+++..++.++.|++.|+.|||+.+  ++||||||+|||++.
T Consensus       110 -----~~~~~~~~~~~~~~qi~~aL~yLH~~~--ivHrDiKp~NILi~~  151 (305)
T d1blxa_         110 -----EPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTS  151 (305)
T ss_dssp             -----TTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred             -----CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecCCCccEEEEcC
Confidence                 134556666899999999999999999  999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.2e-23  Score=134.24  Aligned_cols=104  Identities=23%  Similarity=0.355  Sum_probs=84.9

Q ss_pred             CeeeeccCCC-CCcchHHHHHHHHHHhhCCCCCccceeeeeee-----CCCeEEEEEeccCCCCHHHHHHhccchhHHhh
Q psy4991           1 MCAKLLTTNL-NLPFPRHALREYNIHKALDHPRVVKLYDVFEI-----DANSFCTVLEYCDGHDLDFYLKQHKTIAEREA   74 (122)
Q Consensus         1 vavK~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   74 (122)
                      ||||+++... ++...+.+.+|+.+++.++||||++++++|..     ..+.+|++|||+. +++.+.+.          
T Consensus        45 vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~-~~l~~~~~----------  113 (355)
T d2b1pa1          45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ----------  113 (355)
T ss_dssp             EEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS-EEHHHHHT----------
T ss_pred             EEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccc-hHHHHhhh----------
Confidence            6999998663 33345678899999999999999999999952     2367899999997 45544442          


Q ss_pred             hhcCCCCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          75 RCLSQPYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                          ..+++..++.++.|++.|+.|||+.|  ++||||||+|||++.
T Consensus       114 ----~~~~~~~i~~~~~qil~gl~~LH~~g--iiHrDlKP~Nil~~~  154 (355)
T d2b1pa1         114 ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKS  154 (355)
T ss_dssp             ----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECT
T ss_pred             ----cCCCHHHHHHHHHHHHHHHHHhhhcc--cccccCCcccccccc
Confidence                23456667999999999999999999  999999999999975

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1.7e-21  Score=124.37  Aligned_cols=103  Identities=17%  Similarity=0.171  Sum_probs=81.2

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQP   80 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~   80 (122)
                      ||||++.....   .+.+.+|+++++.++|++++..+..+..+.+..+++|||+. +++...+....           ..
T Consensus        35 vAvK~~~~~~~---~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~~~~-----------~~   99 (299)
T d1ckia_          35 VAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCS-----------RK   99 (299)
T ss_dssp             EEEEEEESCTT---SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTT-----------TC
T ss_pred             EEEEEEchhcc---CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cchhhhhhhcc-----------CC
Confidence            69998876532   34578899999999887766666555447788899999996 67766554321           34


Q ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCcccc
Q psy4991          81 YLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFL  120 (122)
Q Consensus        81 ~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~  120 (122)
                      +.+..+..++.|++.|+.|||+++  ++||||||+|||++
T Consensus       100 ~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDiKp~NIl~~  137 (299)
T d1ckia_         100 FSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMG  137 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHhhcccc
Confidence            566667999999999999999999  99999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.84  E-value=1.1e-20  Score=120.42  Aligned_cols=103  Identities=15%  Similarity=0.148  Sum_probs=84.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCC-CCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDH-PRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQ   79 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~   79 (122)
                      ||||+++...   ....+.+|++.++.++| +|++.+++++. .....+++||++. ++|..++...+           .
T Consensus        33 vAvK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~~~~~~vme~~~-~~l~~~~~~~~-----------~   96 (293)
T d1csna_          33 VAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-EGLHNVLVIDLLG-PSLEDLLDLCG-----------R   96 (293)
T ss_dssp             EEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-ETTEEEEEEECCC-CBHHHHHHHTT-----------T
T ss_pred             EEEEEEcccc---CcHHHHHHHHHHHHhcCCCCCCEEEEEee-cCCccEEEEEecC-CCHHHHHHhhc-----------c
Confidence            6899887553   23457788999999965 89999999887 6778889999994 89988887543           2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          80 PYLSTSARSIVMQVVSALKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        80 ~~~~~~~~~~~~~i~~~l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      .+.+..+..++.|++.|+.|||+.+  ++||||||+||+++.
T Consensus        97 ~~~~~~~~~i~~q~~~~l~~lH~~g--iiHrDiKp~Nili~~  136 (293)
T d1csna_          97 KFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGR  136 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeecC
Confidence            3455566899999999999999999  999999999999963

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=3.5e-17  Score=106.40  Aligned_cols=107  Identities=19%  Similarity=0.262  Sum_probs=76.9

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCC-----------CCCccceeeeeee-CCCeEEEEEeccCCCCH-HHHHHhcc
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALD-----------HPRVVKLYDVFEI-DANSFCTVLEYCDGHDL-DFYLKQHK   67 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~-----------h~~i~~~~~~~~~-~~~~~~lv~e~~~~~~L-~~~l~~~~   67 (122)
                      ||||++++.  ....+.+.+|+.+++.+.           |+||+.+++++.. .....+++++++..+.. ....... 
T Consensus        41 vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  117 (362)
T d1q8ya_          41 VAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY-  117 (362)
T ss_dssp             EEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHT-
T ss_pred             EEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccc-
Confidence            699999865  234567788998888774           5789999988852 33455566666654333 2222211 


Q ss_pred             chhHHhhhhcCCCCChHHHHHHHHHHHHHHHHHHc-CCCCeeeeCCCCCCccccc
Q psy4991          68 TIAEREARCLSQPYLSTSARSIVMQVVSALKYLNE-IKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~~~i~h~dlk~~nill~~  121 (122)
                               ....+.+..++.++.|++.|+.|||+ .+  |+||||||+|||++.
T Consensus       118 ---------~~~~~~~~~i~~i~~qil~al~~lh~~~~--IvHrDlKp~NIll~~  161 (362)
T d1q8ya_         118 ---------EHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEI  161 (362)
T ss_dssp             ---------TTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEE
T ss_pred             ---------cccCCcHHHHHHHHHHHHHHHHHHhhhcC--cccccCChhHeeeec
Confidence                     12455667779999999999999998 77  999999999999963

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.64  E-value=3.3e-16  Score=93.83  Aligned_cols=79  Identities=16%  Similarity=0.152  Sum_probs=61.0

Q ss_pred             HHHHHHHHHhhCCCCCccceeeeeeeCCCeEEEEEeccCCCCHHHHHHhccchhHHhhhhcCCCCChHHHHHHHHHHHHH
Q psy4991          17 HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIAEREARCLSQPYLSTSARSIVMQVVSA   96 (122)
Q Consensus        17 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   96 (122)
                      ...+|...+.++.|.+++..++...     .+++|||+.+..+.+                   +.......++.|++.+
T Consensus        60 ~~~~e~~~l~~l~~~~v~~~~~~~~-----~~lvme~~~~~~~~~-------------------l~~~~~~~i~~ql~~~  115 (191)
T d1zara2          60 SARNEFRALQKLQGLAVPKVYAWEG-----NAVLMELIDAKELYR-------------------VRVENPDEVLDMILEE  115 (191)
T ss_dssp             HHHHHHHHHHHTTTSSSCCEEEEET-----TEEEEECCCCEEGGG-------------------CCCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCcceEEEecC-----CEEEEEeeccccccc-------------------hhhHHHHHHHHHHHHH
Confidence            3456888899999999988776432     258999998644321                   1122236789999999


Q ss_pred             HHHHHcCCCCeeeeCCCCCCccccc
Q psy4991          97 LKYLNEIKPPVIHYDLKPGKPLFLF  121 (122)
Q Consensus        97 l~~lh~~~~~i~h~dlk~~nill~~  121 (122)
                      +.|||+.+  ++|||+||+|||+++
T Consensus       116 l~~lH~~g--iiHrDiKP~NILv~~  138 (191)
T d1zara2         116 VAKFYHRG--IVHGDLSQYNVLVSE  138 (191)
T ss_dssp             HHHHHHTT--EECSCCSTTSEEEET
T ss_pred             HHHHhhCC--EEEccCChhheeeeC
Confidence            99999999  999999999999975

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.62  E-value=0.00032  Score=42.43  Aligned_cols=47  Identities=15%  Similarity=-0.022  Sum_probs=33.5

Q ss_pred             hHHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCHHHH
Q psy4991          15 PRHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFY   62 (122)
Q Consensus        15 ~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   62 (122)
                      ...+.+|...+..+ .+-.+..++.... +.+..+++|++.+|.++...
T Consensus        53 ~~~~~~E~~~l~~l~~~vpvP~vl~~~~-~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          53 TYDVEREKDMMLWLEGKLPVPKVLHFER-HDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TTCHHHHHHHHHHHTTTSCCCCEEEEEE-ETTEEEEEEECCSSEEHHHH
T ss_pred             hhhHHHHHHHHHHHhccCCCCcEEEEEe-cCCceEEEEEeccccccccc
Confidence            44577888888776 3445677777666 56778899999998776543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.05  E-value=0.00043  Score=41.61  Aligned_cols=43  Identities=21%  Similarity=0.132  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHhhCC--CCCccceeeeeeeCCCeEEEEEeccCCCCH
Q psy4991          16 RHALREYNIHKALD--HPRVVKLYDVFEIDANSFCTVLEYCDGHDL   59 (122)
Q Consensus        16 ~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   59 (122)
                      ..+..|...++.+.  ...+.+++.... +.+..+++|++++|.++
T Consensus        49 ~~l~~E~~~l~~L~~~gvpvP~v~~~~~-~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          49 NELQDEAARLSWLATTGVPCAAVLDVVT-EAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEE-CSSCEEEEEECCSSEET
T ss_pred             hHHHHHHHHHHHHHhcCCCCCceeeecc-cccceEEEEEeeecccc
Confidence            45677888777663  334666777666 56677899999986544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.66  E-value=0.015  Score=37.25  Aligned_cols=41  Identities=17%  Similarity=0.026  Sum_probs=24.8

Q ss_pred             hHHHHHHHHHHhhC-CC--CCccceeeeeeeCCCeEEEEEeccCCCC
Q psy4991          15 PRHALREYNIHKAL-DH--PRVVKLYDVFEIDANSFCTVLEYCDGHD   58 (122)
Q Consensus        15 ~~~~~~e~~~l~~~-~h--~~i~~~~~~~~~~~~~~~lv~e~~~~~~   58 (122)
                      ..+...|.+.++.+ .+  ..++.++.+.   ....+++||++.+..
T Consensus        74 ~~R~~~E~~~L~~~~~~~p~~vP~v~~~d---~~~~~lvmE~L~~~~  117 (392)
T d2pula1          74 IDRARIESSALIRQGEHVPHLVPRVFYSD---TEMAVTVMEDLSHLK  117 (392)
T ss_dssp             TTHHHHHHHHHHHHHTTCGGGSCCEEEEE---TTTTEEEECCCTTSE
T ss_pred             HHHHHHHHHHHHHhhhhCCCCcceEEEEc---CCCCEEEEeccCCcc
Confidence            34556788888766 33  3455555433   233458999997644

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=1.1  Score=27.44  Aligned_cols=54  Identities=13%  Similarity=0.085  Sum_probs=29.3

Q ss_pred             CeeeeccCCCCCcchHHHHHHHHHHhhCCCCCc--cceeee----eeeCCCeEEEEEeccCC
Q psy4991           1 MCAKLLTTNLNLPFPRHALREYNIHKALDHPRV--VKLYDV----FEIDANSFCTVLEYCDG   56 (122)
Q Consensus         1 vavK~~~~~~~~~~~~~~~~e~~~l~~~~h~~i--~~~~~~----~~~~~~~~~lv~e~~~~   56 (122)
                      +++|+...+  .-..+.+..|...+..+...++  +.....    .....+..+.+++++.|
T Consensus        49 ~VlK~~rp~--~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          49 FVVKFYRPE--RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             EEEEEECTT--TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             EEEEEeCCC--CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            356766554  2234667788888877632222  222111    11134456788898875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.70  E-value=0.2  Score=31.79  Aligned_cols=39  Identities=28%  Similarity=0.371  Sum_probs=25.8

Q ss_pred             HHHHHHHHHHhhC-CCCCccceeeeeeeCCCeEEEEEeccCCCCH
Q psy4991          16 RHALREYNIHKAL-DHPRVVKLYDVFEIDANSFCTVLEYCDGHDL   59 (122)
Q Consensus        16 ~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   59 (122)
                      ....+|..+++.+ ++.-..++++.+. +    .+|+||++|.++
T Consensus        89 idr~~E~~i~~~ls~~gl~Pkll~~~~-~----g~I~efi~g~~l  128 (395)
T d1nw1a_          89 SHLVAESVIFTLLSERHLGPKLYGIFS-G----GRLEEYIPSRPL  128 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEET-T----EEEECCCCEEEC
T ss_pred             hHHHHHHHHHHHHHhCCCCCeEEEEcC-C----ceEEEEeccccC
Confidence            4556788888887 3443457777664 2    378999986433