Psyllid ID: psy5202

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MSPPYTSPNSGTPLGLITSPQTMNNNNNNSSMSNNNNICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPSLVSSEEDSSVASTKDNT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEccccccccccHHEHEEccccccccccccccccEEEEEHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccccHHHHHHHHHHHHHHHHHHccccccccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccEccccHHHEHEHHccccccccccccccccccHHHHHHHHccccccccccccccEcccccccEcccccccEccccHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
msppytspnsgtplglitspqtmnnnnnnssmsnnnnicfespsgtlekelqrpksptnkiadlssstspskqedfqlSYAMSttsqeeknkecefcgkkfkyeNTLQAHrrnhtgekpfkctvcdhacsqSAKLKKHMkihdedgdkedreegpsaSSLAAAAAAAALNlclpnshmkkesrrndtcefcgkvfkncsnltvhrrshtgekpykcelcsyacaqsSKLTRHmkthgrlgkdvyrcrfcempfsvpstlEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLdghmmenmkldnhnvihnlkmdghsmmapslvsseedssvastkdnt
Flexible Loop (DISEMBL)
msppytspnsgtplgLITSPQTMNNNNNNSSMSNNNNICFESPSGTLEKELQRPKSPtnkiadlssstspskqedFQLSYAMsttsqeeknkECEFCGKKFKYENTLQAhrrnhtgekpfkCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGkvfkncsnltvhrrshtgekpykcELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEmpfsvpstlekHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPslvsseedssvastkdnt
Low Complexity Region (SEG)
MSPPYTSPNSGTPLGLITSPQTmnnnnnnssmsnnnnICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHdedgdkedreegPsasslaaaaaaaalNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPSLVSSEEDSSVASTKDNT
Disordered region (IsUnstruct)
*********************************************************************************************CEFCGKKFKYENTLQA********KPFKCTVCDHAC*************************************AALNLCL************DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVN********************II****************************************************
Disordered Region (DISOPRED)
*SPPYTSPNSGTPLGLITS*************SNNNNICFESPSGTLEK*LQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPS*****************
Disordered Region (DISEMBL)
***********TPLGLITSPQTMNNNNNNSSMSNNNNICFESPSGT*****************************FQLSY************ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACS********************************AAAAAALNLCLPNSH********DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAP******************
Disordered Region (DISPRO)
**PPYTSPNSGTPLGLITSPQTMNNNNNNSSMSNNNNICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPSLVSSEEDSS********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSPPYTSPNSGTPLGLITSPQTMNNNNNNSSMSNNNNICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMMENMKLDNHNVIHNLKMDGHSMMAPSLVSSEEDSSVASTKDNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q9H165	835	B-cell lymphoma/leukemia	yes	N/A	0.297	0.122	0.735	7e-42
Q9C0K0	894	B-cell lymphoma/leukemia	no	N/A	0.344	0.131	0.647	1e-41
Q99PV8	884	B-cell lymphoma/leukemia	no	N/A	0.344	0.133	0.647	1e-41
Q8NB50	900	Zinc finger protein 62 ho	no	N/A	0.478	0.182	0.420	5e-27
Q8C827	914	Zinc finger protein 62 OS	no	N/A	0.478	0.179	0.397	1e-26
O75437	659	Zinc finger protein 254 O	no	N/A	0.641	0.333	0.349	9e-26
Q8BI99	563	Zinc finger protein 879 O	no	N/A	0.478	0.291	0.397	4e-25
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.472	0.138	0.419	4e-25
Q03923	595	Zinc finger protein 85 OS	no	N/A	0.475	0.273	0.446	5e-25
A6NNF4	738	Zinc finger protein 726 O	no	N/A	0.527	0.245	0.399	8e-25

>sp|Q9H165|BC11A_HUMAN B-cell lymphoma/leukemia 11A OS=Homo sapiens GN=BCL11A PE=1 SV=2

 Score =  171 bits (433), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 90/106 (84%), Gaps = 4/106 (3%)

Query: 174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
           P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct: 730 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 789

Query: 234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMKME 275
           KTHG++GKDVY+C  C+MPFSV STLEKHM+K     V+N ++K E
Sbjct: 790 KTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE 835

Functions as a myeloid and B-cell proto-oncogene. May play important roles in leukemogenesis and hematopoiesis. An essential factor in lymphopoiesis, is required for B-cell formation in fetal liver. May function as a modulator of the transcriptional repression activity of ARP1.
Homo sapiens (taxid: 9606)

>sp|Q9C0K0|BC11B_HUMAN B-cell lymphoma/leukemia 11B OS=Homo sapiens GN=BCL11B PE=1 SV=1

 Score =  171 bits (432), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 4/122 (3%)

Query: 158 SSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           S  A+  +   L    P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCE
Sbjct: 768 SGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCE 827

Query: 218 LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMK 273
           LC+YACAQSSKLTRHMKTHG++GK+VYRC  C+MPFSV STLEKHM+K     ++  ++K
Sbjct: 828 LCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLLTNDVK 887

Query: 274 ME 275
           +E
Sbjct: 888 IE 889

Tumor-suppressor protein involved in T-cell lymphomas. May function on the P53-signaling pathway. May be a key regulator of both differentiation and survival during thymocyte development. Repress transcription through direct, TFCOUP2-independent binding to a GC-rich response element.

Homo sapiens (taxid: 9606)

>sp|Q99PV8|BC11B_MOUSE B-cell lymphoma/leukemia 11B OS=Mus musculus GN=Bcl11b PE=1 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 95/122 (77%), Gaps = 4/122 (3%)

Query: 158 SSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           S  A+  +   L    P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCE
Sbjct: 758 SGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCE 817

Query: 218 LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMK 273
           LC+YACAQSSKLTRHMKTHG++GK+VYRC  C+MPFSV STLEKHM+K     ++  ++K
Sbjct: 818 LCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLLTNDVK 877

Query: 274 ME 275
           +E
Sbjct: 878 IE 879

Tumor-suppressor protein involved in T-cell lymphomas. May function on the P53-signaling pathway. May be a key regulator of both differentiation and survival during thymocyte development. Repress transcription through direct, TFCOUP2-independent binding to a GC-rich response element.

Mus musculus (taxid: 10090)

>sp|Q8NB50|ZFP62_HUMAN Zinc finger protein 62 homolog OS=Homo sapiens GN=ZFP62 PE=2 SV=3

 Score =  122 bits (305), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 91/176 (51%), Gaps = 12/176 (6%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  EC+ CGK F+  + L  H+R HTGEKP+KC VC  A S S+ L  H  IH      
Sbjct: 362 EKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSSGLAVHKSIHPGKKAH 421

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
           E +E G S S           N  L          R   C+ CGK F+N + L VHRR H
Sbjct: 422 ECKECGKSFS----------YNSLLLQHRTIHTGERPYVCDVCGKTFRNNAGLKVHRRLH 471

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           TGEKPYKC++C  A    S L  H   H  LG+  Y+C +CE  F+  S LE+H R
Sbjct: 472 TGEKPYKCDVCGKAYISRSSLKNHKGIH--LGEKPYKCSYCEKSFNYSSALEQHKR 525

May play a role in differentiating skeletal muscle.

Homo sapiens (taxid: 9606)

>sp|Q8C827|ZFP62_MOUSE Zinc finger protein 62 OS=Mus musculus GN=Zfp62 PE=2 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 12/176 (6%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  EC+ CGK F+  + L  H+R HTGEKP+KC +C  A S S+ L  H  IH      
Sbjct: 352 EKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDICGKAFSYSSGLAVHKSIHP----- 406

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                G  A        + + N  L          R   C+ CGK F+N S L VHRR H
Sbjct: 407 -----GKKAHECKDCGKSFSYNSLLLQHKTIHTGERPYVCDVCGKTFRNNSGLKVHRRLH 461

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           TGEKPYKC++C  A    S L  H   H  +G+  Y+C +CE  F+  S LE+H R
Sbjct: 462 TGEKPYKCDVCGKAYISRSSLKNHKGIH--MGEKPYKCSYCEKSFNYSSALEQHKR 515

May play a role in differentiating skeletal muscle.

Mus musculus (taxid: 10090)

>sp|O75437|ZN254_HUMAN Zinc finger protein 254 OS=Homo sapiens GN=ZNF254 PE=2 SV=3

 Score =  117 bits (294), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 116/243 (47%), Gaps = 23/243 (9%)

Query: 58  TNKIADLSSSTSPSKQEDFQLSYAMSTTSQEEKN-------KECEFCGKKFKYENTLQAH 110
           T+KI  + +   P K E+   ++  S+T  E K         +CE CGK F + +TL  H
Sbjct: 283 THKI--IHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRH 340

Query: 111 RRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALN 170
           +R HTGEKP+KC  C  A SQS+ L  H  IH  +   +  E G +   L+       ++
Sbjct: 341 KRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIH 400

Query: 171 LCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLT 230
           +            +   CE CGK F   SNLT H+  HTGEKPYKCE C  A   SS LT
Sbjct: 401 V----------GEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLT 450

Query: 231 RHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKME--SHNIMQNMKMDNH 288
           +H + H R  +  Y+C  C   F   STL +H R     +  K E    +  Q+  +  H
Sbjct: 451 KHKRIHTR--EKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTH 508

Query: 289 NII 291
            II
Sbjct: 509 KII 511

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BI99|ZN879_MOUSE Zinc finger protein 879 OS=Mus musculus GN=Znf879 PE=2 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 95/176 (53%), Gaps = 12/176 (6%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           E+  EC+ CGK FK  ++L  H+R HTGEKP+KC  C  A SQ + L +H +IH  +   
Sbjct: 285 ERPYECKECGKTFKGSSSLHNHQRIHTGEKPYKCNECGRAFSQCSSLIQHHRIHTGEKPY 344

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
           E  + G + +S++           L   H      +   C  CGKVF   S LT+H+R+H
Sbjct: 345 ECSQCGKAFTSISR----------LSRHHRVHTGEKPFHCNVCGKVFSYHSALTIHQRTH 394

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           TGEKPY C+ C  A +QSS LT+H + H   G+  Y+C  C   FS  S L  H R
Sbjct: 395 TGEKPYACKECGKAFSQSSALTQHQRIH--TGEKPYKCAECGKAFSWLSRLNIHHR 448

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 94/174 (54%), Gaps = 12/174 (6%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  +CE CGK FK+ + L+ H+  HTGEKP+KC  C  A  QS+KL KH KIH  +   
Sbjct: 821 EKPCKCEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKAFHQSSKLAKHKKIHTGEKPY 880

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
           +  E G + + L+       ++            ++   CE CGK F   +NLT H+R H
Sbjct: 881 KCEECGKAFNRLSHLTTHKIIHT----------GKKPYKCEECGKAFNQSANLTTHKRIH 930

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKH 262
           TGEKPYKCE C  A +QSS LT H   H   G+  Y+C  C   FS  STL  H
Sbjct: 931 TGEKPYKCEECGRAFSQSSTLTAHKIIHA--GEKPYKCEECGKAFSQSSTLTTH 982

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q03923|ZNF85_HUMAN Zinc finger protein 85 OS=Homo sapiens GN=ZNF85 PE=2 SV=3

 Score =  115 bits (288), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 97/177 (54%), Gaps = 14/177 (7%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  +C+ CGK FK+ +TL  H+  HTGEKP+KC  C+ A +QS+KL +H KIH   G+K
Sbjct: 395 EKPYKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEHKKIHT--GEK 452

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDT-CEFCGKVFKNCSNLTVHRRS 207
                 P        A   + NL     H K  +      CE CGK FK  S LT+H+  
Sbjct: 453 ------PYECEKCGKAFNQSSNL---TRHKKSHTEEKPYKCEECGKGFKWPSTLTIHKII 503

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           HTGEKPYKCE C  A  QSSKLT+H K H   G+  Y C  C   F+  S L KH R
Sbjct: 504 HTGEKPYKCEECGKAFNQSSKLTKHKKIH--TGEKPYTCEECGKAFNQSSNLTKHKR 558

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|A6NNF4|ZN726_HUMAN Zinc finger protein 726 OS=Homo sapiens GN=ZNF726 PE=2 SV=3

 Score =  114 bits (286), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 102/208 (49%), Gaps = 27/208 (12%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  +CE CGK F + +TL  H+R HTGEKP+KC  C  A  +S+ L KH  IH   G+K
Sbjct: 366 EKPYKCEECGKAFIWPSTLTKHKRIHTGEKPYKCEECGKAFHRSSNLTKHKIIHT--GEK 423

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDT-CEFCGKVFKNCSNLTVHRRS 207
                 P        A   + NL     H K  +R     CE C K F   S LT H+R 
Sbjct: 424 ------PYKCEECGKAFIWSSNL---TEHKKIHTREKPYKCEECSKAFSRSSALTTHKRM 474

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR--- 264
           HTGEKPYKCE C  A +QSS LT H   H   G+  Y+C  C   F + STL KH R   
Sbjct: 475 HTGEKPYKCEECGKAFSQSSTLTAHKIIH--TGEKPYKCEECGKAFILSSTLSKHKRIHT 532

Query: 265 -----KC-----VVNQNMKMESHNIMQN 282
                KC       NQ+  + +H I+  
Sbjct: 533 GEKPYKCEECGKTFNQSSNLSTHKIIHT 560

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
443708327	141	hypothetical protein CAPTEDRAFT_65449, p	0.411	1.0	0.617	5e-54
321463923	1045	hypothetical protein DAPPUDRAFT_323911 [	0.384	0.126	0.731	5e-51
242025086	879	B-cell lymphoma/leukemia, putative [Pedi	0.285	0.111	0.929	2e-50
91081583	831	PREDICTED: similar to B-cell CLL/lymphom	0.288	0.119	0.92	3e-50
347968184	1067	AGAP002610-PA [Anopheles gambiae str. PE	0.274	0.088	0.968	4e-50
270005111	667	hypothetical protein TcasGA2_TC007120 [T	0.288	0.148	0.92	6e-50
357606996	864	putative B-cell CLL/lymphoma 11A [Danaus	0.230	0.091	0.967	1e-49
195163664	1232	GL14690 [Drosophila persimilis] gi|19410	0.274	0.076	0.947	4e-49
386763968	1207	CG9650, isoform I [Drosophila melanogast	0.274	0.077	0.947	4e-49
281359994	1209	CG9650, isoform H [Drosophila melanogast	0.274	0.077	0.947	4e-49

>gi|443708327|gb|ELU03496.1| hypothetical protein CAPTEDRAFT_65449, partial [Capitella teleta]

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/175 (61%), Positives = 120/175 (68%), Gaps = 34/175 (19%)

Query: 90  KNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKE 149
           K K CEFCGK F++ + L  HRR HTGEKP++C +C H C Q++KLK+HMK+        
Sbjct: 1   KTKPCEFCGKCFRFHSNLIVHRRVHTGEKPYRCPLCSHTCGQASKLKRHMKM-------- 52

Query: 150 DREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHT 209
                              L             +RNDTCEFCGKVFKNCSNLTVHRRSHT
Sbjct: 53  --------------TGGVPLR------------KRNDTCEFCGKVFKNCSNLTVHRRSHT 86

Query: 210 GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           GEKPYKC LCSYACAQSSKLTRHMKTHGRLGKDVYRC+FC MPFSV STLEKHMR
Sbjct: 87  GEKPYKCALCSYACAQSSKLTRHMKTHGRLGKDVYRCKFCNMPFSVASTLEKHMR 141

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|321463923|gb|EFX74935.1| hypothetical protein DAPPUDRAFT_323911 [Daphnia pulex]

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 98/134 (73%), Positives = 104/134 (77%), Gaps = 2/134 (1%)

Query: 178  MKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG 237
            MKKESRRNDTCE+CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG
Sbjct: 879  MKKESRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG 938

Query: 238  RLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLD 297
            RLGKDVYRCRFCEMPFSVPSTLEKHMRKCVV Q  K    N              N  + 
Sbjct: 939  RLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVQQQKKAARLNAAAAAAAAAAAAAANGGMV 998

Query: 298  GHMMENMKLDNHNV 311
            G +  N+ + N+N 
Sbjct: 999  GQV--NLMMPNNNA 1010

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242025086|ref|XP_002432957.1| B-cell lymphoma/leukemia, putative [Pediculus humanus corporis] gi|212518466|gb|EEB20219.1| B-cell lymphoma/leukemia, putative [Pediculus humanus corporis]

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/99 (92%), Positives = 97/99 (97%), Gaps = 1/99 (1%)

Query: 174 PNSHMKKES-RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH 232
           P +H+KKES RRNDTCE+CGK+FKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH
Sbjct: 756 PTTHIKKESSRRNDTCEYCGKIFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH 815

Query: 233 MKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
           MKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVV+QN
Sbjct: 816 MKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVSQN 854

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081583|ref|XP_975280.1| PREDICTED: similar to B-cell CLL/lymphoma 11A [Tribolium castaneum]

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 96/100 (96%), Gaps = 1/100 (1%)

Query: 173 LPNSHMKKES-RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR 231
           LPN  +KK++ RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR
Sbjct: 705 LPNPLIKKDTNRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR 764

Query: 232 HMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
           HMKTHGR+GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ 
Sbjct: 765 HMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQG 804

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968184|ref|XP_312324.5| AGAP002610-PA [Anopheles gambiae str. PEST] gi|333468124|gb|EAA07636.5| AGAP002610-PA [Anopheles gambiae str. PEST]

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 92/95 (96%), Positives = 93/95 (97%), Gaps = 1/95 (1%)

Query: 178 MKKESR-RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           MKKES+ RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH
Sbjct: 816 MKKESKLRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 875

Query: 237 GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
           GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ 
Sbjct: 876 GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQG 910

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005111|gb|EFA01559.1| hypothetical protein TcasGA2_TC007120 [Tribolium castaneum]

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 96/100 (96%), Gaps = 1/100 (1%)

Query: 173 LPNSHMKKES-RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR 231
           LPN  +KK++ RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR
Sbjct: 541 LPNPLIKKDTNRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR 600

Query: 232 HMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
           HMKTHGR+GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ 
Sbjct: 601 HMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQG 640

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357606996|gb|EHJ65312.1| putative B-cell CLL/lymphoma 11A [Danaus plexippus]

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/92 (96%), Positives = 91/92 (98%)

Query: 180 KESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRL 239
           K+ RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRL
Sbjct: 754 KDGRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRL 813

Query: 240 GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
           GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ+
Sbjct: 814 GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQS 845

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195163664|ref|XP_002022669.1| GL14690 [Drosophila persimilis] gi|194104692|gb|EDW26735.1| GL14690 [Drosophila persimilis]

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 90/95 (94%), Positives = 92/95 (96%), Gaps = 1/95 (1%)

Query: 178  MKKESR-RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            +KKESR RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH
Sbjct: 1029 LKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 1088

Query: 237  GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
            GR GKDVYRCRFC+MPFSVPSTLEKHMRKCVVNQ 
Sbjct: 1089 GRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQG 1123

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386763968|ref|NP_727173.2| CG9650, isoform I [Drosophila melanogaster] gi|383293257|gb|AAN09205.2| CG9650, isoform I [Drosophila melanogaster]

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 90/95 (94%), Positives = 92/95 (96%), Gaps = 1/95 (1%)

Query: 178  MKKESR-RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            +KKESR RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH
Sbjct: 1013 LKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 1072

Query: 237  GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
            GR GKDVYRCRFC+MPFSVPSTLEKHMRKCVVNQ 
Sbjct: 1073 GRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQG 1107

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281359994|ref|NP_001096900.2| CG9650, isoform H [Drosophila melanogaster] gi|272506016|gb|ABW09352.2| CG9650, isoform H [Drosophila melanogaster]

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 90/95 (94%), Positives = 92/95 (96%), Gaps = 1/95 (1%)

Query: 178  MKKESR-RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            +KKESR RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH
Sbjct: 1015 LKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 1074

Query: 237  GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN 271
            GR GKDVYRCRFC+MPFSVPSTLEKHMRKCVVNQ 
Sbjct: 1075 GRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQG 1109

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
FB|FBgn0029939	1209	CG9650 [Drosophila melanogaste	0.294	0.083	0.892	4.5e-67
UNIPROTKB|F1SAQ5	697	BCL11B "Uncharacterized protei	0.268	0.131	0.804	4.1e-64
UNIPROTKB|D3YTK1	700	BCL11B "B-cell lymphoma/leukem	0.268	0.131	0.804	4.4e-64
UNIPROTKB|Q9C0K0	894	BCL11B "B-cell lymphoma/leukem	0.268	0.102	0.804	7.8e-63
UNIPROTKB|E1BD25	904	BCL11B "Uncharacterized protei	0.268	0.101	0.804	8.6e-63
UNIPROTKB|E2RCL6	917	BCL11B "Uncharacterized protei	0.268	0.100	0.804	9.7e-63
UNIPROTKB|F1NL75	796	BCL11A "Uncharacterized protei	0.297	0.128	0.735	9.8e-62
UNIPROTKB|Q9H165	835	BCL11A "B-cell lymphoma/leukem	0.297	0.122	0.735	1.7e-61
UNIPROTKB|F2Z5U2	835	BCL11A "Uncharacterized protei	0.297	0.122	0.735	1.7e-61
ZFIN|ZDB-GENE-060421-4643	829	bcl11aa "B-cell CLL/lymphoma 1	0.268	0.110	0.804	3.6e-61

FB|FBgn0029939 CG9650 [Drosophila melanogaster (taxid:7227)]

 Score = 502 (181.8 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
 Identities = 91/102 (89%), Positives = 94/102 (92%)

Query:   178 MKKESR-RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
             +KKESR RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH
Sbjct:  1015 LKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 1074

Query:   237 GRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKMESHN 278
             GR GKDVYRCRFC+MPFSVPSTLEKHMRKCVVNQ     + N
Sbjct:  1075 GRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAN 1116

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SAQ5 BCL11B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 429 (156.1 bits), Expect = 4.1e-64, Sum P(3) = 4.1e-64
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   587 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 646

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GK+VYRC  C+MPFSV STLEKHM+K
Sbjct:   647 KTHGQIGKEVYRCDICQMPFSVYSTLEKHMKK 678

GO:0071678 "olfactory bulb axon guidance" evidence=IEA

GO:0048538 "thymus development" evidence=IEA

GO:0046632 "alpha-beta T cell differentiation" evidence=IEA

GO:0045664 "regulation of neuron differentiation" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0043368 "positive T cell selection" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0033153 "T cell receptor V(D)J recombination" evidence=IEA

GO:0033077 "T cell differentiation in thymus" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0021773 "striatal medium spiny neuron differentiation" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003382 "epithelial cell morphogenesis" evidence=IEA

GO:0003334 "keratinocyte development" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0000978 "RNA polymerase II core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|D3YTK1 BCL11B "B-cell lymphoma/leukemia 11B" [Homo sapiens (taxid:9606)]

 Score = 429 (156.1 bits), Expect = 4.4e-64, Sum P(3) = 4.4e-64
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   590 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 649

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GK+VYRC  C+MPFSV STLEKHM+K
Sbjct:   650 KTHGQIGKEVYRCDICQMPFSVYSTLEKHMKK 681

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9C0K0 BCL11B "B-cell lymphoma/leukemia 11B" [Homo sapiens (taxid:9606)]

 Score = 429 (156.1 bits), Expect = 7.8e-63, Sum P(3) = 7.8e-63
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   784 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 843

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GK+VYRC  C+MPFSV STLEKHM+K
Sbjct:   844 KTHGQIGKEVYRCDICQMPFSVYSTLEKHMKK 875

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000978 "RNA polymerase II core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0003334 "keratinocyte development" evidence=IEA

GO:0003382 "epithelial cell morphogenesis" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0021773 "striatal medium spiny neuron differentiation" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0033077 "T cell differentiation in thymus" evidence=IEA

GO:0033153 "T cell receptor V(D)J recombination" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043368 "positive T cell selection" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0045664 "regulation of neuron differentiation" evidence=IEA

GO:0046632 "alpha-beta T cell differentiation" evidence=IEA

GO:0048538 "thymus development" evidence=IEA

GO:0071678 "olfactory bulb axon guidance" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

UNIPROTKB|E1BD25 BCL11B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 429 (156.1 bits), Expect = 8.6e-63, Sum P(3) = 8.6e-63
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   794 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 853

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GK+VYRC  C+MPFSV STLEKHM+K
Sbjct:   854 KTHGQIGKEVYRCDICQMPFSVYSTLEKHMKK 885

GO:0071678 "olfactory bulb axon guidance" evidence=IEA

GO:0048538 "thymus development" evidence=IEA

GO:0046632 "alpha-beta T cell differentiation" evidence=IEA

GO:0045664 "regulation of neuron differentiation" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0043368 "positive T cell selection" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0033153 "T cell receptor V(D)J recombination" evidence=IEA

GO:0033077 "T cell differentiation in thymus" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0021773 "striatal medium spiny neuron differentiation" evidence=IEA

GO:0019216 "regulation of lipid metabolic process" evidence=IEA

GO:0010837 "regulation of keratinocyte proliferation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003382 "epithelial cell morphogenesis" evidence=IEA

GO:0003334 "keratinocyte development" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0000978 "RNA polymerase II core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RCL6 BCL11B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 429 (156.1 bits), Expect = 9.7e-63, Sum P(3) = 9.7e-63
 Identities = 74/92 (80%), Positives = 83/92 (90%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   807 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 866

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GK+VYRC  C+MPFSV STLEKHM+K
Sbjct:   867 KTHGQIGKEVYRCDICQMPFSVYSTLEKHMKK 898

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1NL75 BCL11A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 434 (157.8 bits), Expect = 9.8e-62, Sum P(2) = 9.8e-62
 Identities = 78/106 (73%), Positives = 89/106 (83%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   691 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 750

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMKME 275
             KTHG++GKDVY+C  C+MPFSV STLEKHM+K     V+N  +K E
Sbjct:   751 KTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNEIKTE 796

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0048672 "positive regulation of collateral sprouting" evidence=IEA

GO:2000171 "negative regulation of dendrite development" evidence=IEA

UNIPROTKB|Q9H165 BCL11A "B-cell lymphoma/leukemia 11A" [Homo sapiens (taxid:9606)]

 Score = 435 (158.2 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
 Identities = 78/106 (73%), Positives = 90/106 (84%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   730 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 789

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMKME 275
             KTHG++GKDVY+C  C+MPFSV STLEKHM+K     V+N ++K E
Sbjct:   790 KTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE 835

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0005737 "cytoplasm" evidence=ISS;NAS

GO:0030097 "hemopoiesis" evidence=NAS

GO:0016925 "protein sumoylation" evidence=ISS

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=TAS

GO:0048671 "negative regulation of collateral sprouting" evidence=IMP

GO:2000171 "negative regulation of dendrite development" evidence=IMP

GO:0010977 "negative regulation of neuron projection development" evidence=IDA

GO:0048672 "positive regulation of collateral sprouting" evidence=IMP

GO:0050773 "regulation of dendrite development" evidence=IMP

GO:0010976 "positive regulation of neuron projection development" evidence=IDA

GO:0032463 "negative regulation of protein homooligomerization" evidence=IC

GO:0030517 "negative regulation of axon extension" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

UNIPROTKB|F2Z5U2 BCL11A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 435 (158.2 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
 Identities = 78/106 (73%), Positives = 90/106 (84%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     KE RR+DTCE+CGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   730 PGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 789

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC----VVNQNMKME 275
             KTHG++GKDVY+C  C+MPFSV STLEKHM+K     V+N ++K E
Sbjct:   790 KTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE 835

GO:2000171 "negative regulation of dendrite development" evidence=IEA

GO:0048672 "positive regulation of collateral sprouting" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0030183 "B cell differentiation" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-060421-4643 bcl11aa "B-cell CLL/lymphoma 11Aa" [Danio rerio (taxid:7955)]

 Score = 430 (156.4 bits), Expect = 3.6e-61, Sum P(2) = 3.6e-61
 Identities = 74/92 (80%), Positives = 82/92 (89%)

Query:   174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
             P     K+ RR DTCEFCGKVFKNCSNLTVHRRSHTGE+PYKCELC+YACAQSSKLTRHM
Sbjct:   724 PGRPSSKDGRRTDTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHM 783

Query:   234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
             KTHG++GKDVY+C  C+MPFSV STLEKHM+K
Sbjct:   784 KTHGQVGKDVYKCEICQMPFSVYSTLEKHMKK 815

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	343
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	2e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 200 NLTVHRRSHTGEKPYKCELCSYACAQ 225
           NL  H R+HTGEKPYKC +C  + + 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 107 LQAHRRNHTGEKPFKCTVCDHACSQ 131
           L+ H R HTGEKP+KC VC  + S 
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG2462|consensus	279		100.0
KOG2462|consensus	279		99.93
KOG1074|consensus	958		99.88
KOG1074|consensus	958		99.84
KOG3608|consensus	467		99.83
KOG3608|consensus	467		99.82
KOG3576|consensus	267		99.81
KOG3576|consensus	267		99.81
KOG3623|consensus	1007		99.69
KOG3623|consensus	1007		99.67
PLN03086	567	PRLI-interacting factor K; Provisional	99.5
KOG3993|consensus	500		99.46
PHA00733	128	hypothetical protein	99.3
PLN03086	567	PRLI-interacting factor K; Provisional	99.24
PHA00733	128	hypothetical protein	99.18
PHA02768	55	hypothetical protein; Provisional	99.03
PHA02768	55	hypothetical protein; Provisional	99.0
KOG3993|consensus	500		98.85
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.84
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.66
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.6
PHA00732	79	hypothetical protein	98.58
PHA00616	44	hypothetical protein	98.55
PHA00616	44	hypothetical protein	98.55
PHA00732	79	hypothetical protein	98.4
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.34
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.16
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.15
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.04
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.03
KOG2231|consensus	669		98.01
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.95
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.91
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.81
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.76
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.7
KOG2231|consensus	669		97.69
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.48
KOG1146|consensus	1406		97.37
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.29
smart00355	26	ZnF_C2H2 zinc finger.	97.26
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.26
KOG2785|consensus	390		97.24
smart00355	26	ZnF_C2H2 zinc finger.	97.2
COG5048	467	FOG: Zn-finger [General function prediction only]	97.13
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.12
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.12
KOG1146|consensus	1406		97.12
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.06
PRK04860	160	hypothetical protein; Provisional	96.87
PRK04860	160	hypothetical protein; Provisional	96.87
KOG2785|consensus	390		96.86
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.82
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.82
KOG2482|consensus	423		96.62
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.49
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.47
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.02
KOG2482|consensus	423		95.8
KOG4173|consensus	253		95.44
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.39
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.88
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.66
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.36
KOG4173|consensus	253		94.24
KOG2893|consensus	341		93.84
COG4049	65	Uncharacterized protein containing archaeal-type C	93.76
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.72
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.42
COG5048	467	FOG: Zn-finger [General function prediction only]	93.36
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.28
COG4049	65	Uncharacterized protein containing archaeal-type C	93.2
KOG2893|consensus	341		92.98
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	92.89
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.69
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	90.8
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.78
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	90.37
COG1592	166	Rubrerythrin [Energy production and conversion]	90.36
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.29
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.17
KOG2807|consensus	378		89.98
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	89.96
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	89.19
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	88.81
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.74
PHA00626	59	hypothetical protein	88.49
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	87.92
KOG2186|consensus	276		87.47
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	87.02
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	86.95
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.85
KOG2186|consensus	276		86.76
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	86.76
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	86.51
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	86.29
COG1198	730	PriA Primosomal protein N' (replication factor Y)	86.27
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.15
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	85.76
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	85.39
smart00531	147	TFIIE Transcription initiation factor IIE.	85.17
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	85.12
COG1592	166	Rubrerythrin [Energy production and conversion]	84.83
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.77
PRK04023	1121	DNA polymerase II large subunit; Validated	84.58
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	84.36
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	84.14
PRK06266	178	transcription initiation factor E subunit alpha; V	83.85
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	82.98
PF15269	54	zf-C2H2_7: Zinc-finger	82.4
smart00531	147	TFIIE Transcription initiation factor IIE.	82.17
KOG4167|consensus	907		81.62
PRK06266	178	transcription initiation factor E subunit alpha; V	81.42
KOG4377|consensus	480		81.36
COG5188	470	PRP9 Splicing factor 3a, subunit 3 [RNA processing	80.92
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.88
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.8

>KOG2462|consensus

Probab=100.00  E-value=4.9e-34  Score=226.21  Aligned_cols=137  Identities=34%  Similarity=0.645  Sum_probs=129.3

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccC---CCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHH
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTG---EKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA  163 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  163 (343)
                      .....|+|..||+.|.+..+|.+|.++|..   .+.+.|++|++.|.+...|+.|+++|.                    
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--------------------  185 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--------------------  185 (279)
T ss_pred             ccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--------------------
Confidence            355679999999999999999999999965   577999999999999999999999996                    


Q ss_pred             HHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcc
Q psy5202         164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDV  243 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  243 (343)
                                          -++.|.+||+.|...+.|+.|+|+|+|||||.|+.|+++|..+++|+.||++|.  +.++
T Consensus       186 --------------------l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS--~~K~  243 (279)
T KOG2462|consen  186 --------------------LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS--DVKK  243 (279)
T ss_pred             --------------------CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhc--CCcc
Confidence                                578999999999999999999999999999999999999999999999999997  7789


Q ss_pred             cccCCCCCCCCChHHHHHHHhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |+|..|+|+|..++.|.+|...
T Consensus       244 ~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  244 HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999874

>KOG2462|consensus

Probab=99.93  E-value=1.5e-26  Score=183.86  Aligned_cols=126  Identities=28%  Similarity=0.575  Sum_probs=114.9

Q ss_pred             CCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccc
Q psy5202         116 GEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVF  195 (343)
Q Consensus       116 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  195 (343)
                      ....|+|+.|++.+.+..+|.+|.++|....                                   ..+.+.|.+|+++|
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~-----------------------------------s~ka~~C~~C~K~Y  171 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLD-----------------------------------SKKAFSCKYCGKVY  171 (279)
T ss_pred             cCCceeccccccccccccccchhhccccccc-----------------------------------ccccccCCCCCcee
Confidence            3456999999999999999999999997532                                   12789999999999


Q ss_pred             cCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCccccccc
Q psy5202         196 KNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNMKME  275 (343)
Q Consensus       196 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  275 (343)
                      .....|..|+++|+  -+++|.+||+.|.+.+.|+.|+|+|+  ||+||.|+.|+|.|..+++|+.||++|...+.+.|.
T Consensus       172 vSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHT--GEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~  247 (279)
T KOG2462|consen  172 VSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHT--GEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCP  247 (279)
T ss_pred             eehHHHhhHhhccC--CCcccccccccccchHHhhccccccc--CCCCccCCcccchhcchHHHHHHHHhhcCCccccCc
Confidence            99999999999997  68999999999999999999999997  999999999999999999999999999999998887


Q ss_pred             chhHH
Q psy5202         276 SHNIM  280 (343)
Q Consensus       276 ~~~~~  280 (343)
                      .+...
T Consensus       248 ~C~Ks  252 (279)
T KOG2462|consen  248 RCGKS  252 (279)
T ss_pred             chhhH
Confidence            66544

>KOG1074|consensus

Probab=99.88  E-value=9.6e-23  Score=183.56  Aligned_cols=90  Identities=31%  Similarity=0.626  Sum_probs=79.1

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcC--CCCcccccC---CCCCCCCChHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGR--LGKDVYRCR---FCEMPFSVPST  258 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~C~---~C~~~f~~~~~  258 (343)
                      .+-.|-+|-++...++.|+-|.++|+||+||+|.+||+.|.++.+|+.||-+|..  .-.-.|.|+   +|-+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            4667999999999999999999999999999999999999999999999999851  011348899   99999999999


Q ss_pred             HHHHHhhhcCccccc
Q psy5202         259 LEKHMRKCVVNQNMK  273 (343)
Q Consensus       259 l~~H~~~~~~~~~~~  273 (343)
                      |..|+|.|-+.....
T Consensus       684 lpQhIriH~~~~~s~  698 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISN  698 (958)
T ss_pred             ccceEEeecCCCCCC
Confidence            999999988655433

>KOG1074|consensus

Probab=99.84  E-value=3.6e-22  Score=179.92  Aligned_cols=177  Identities=27%  Similarity=0.510  Sum_probs=129.6

Q ss_pred             CCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCC-CcchHHHHHHHH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGP-SASSLAAAAAAA  167 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~-~~~~~~~~~~~~  167 (343)
                      -.+-+|-+|-++...+..|+.|.++|+|++||+|.+||+.|.++.+|+.||-.|....+.......+ .+..........
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            4568999999999999999999999999999999999999999999999999987654332111110 000000000000


Q ss_pred             HhhhcCCCCcccc--------------cCCCCcccccCcccccCHHHHHHHHHHccCC----------------------
Q psy5202         168 ALNLCLPNSHMKK--------------ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGE----------------------  211 (343)
Q Consensus       168 ~~~~~~~~~~~~~--------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----------------------  211 (343)
                           ....+++.              .....-+|..|.+.|.....+..++..|.+.                      
T Consensus       683 -----~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~  757 (958)
T KOG1074|consen  683 -----TLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPP  757 (958)
T ss_pred             -----cccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCC
Confidence                 01111111              1112345777888887777777776655210                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy5202         212 --------------------------------------------------------------------------------  211 (343)
Q Consensus       212 --------------------------------------------------------------------------------  211 (343)
                                                                                                      
T Consensus       758 ~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l  837 (958)
T KOG1074|consen  758 PPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSML  837 (958)
T ss_pred             ccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCC
Q psy5202         212 ----------------------------------------KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEM  251 (343)
Q Consensus       212 ----------------------------------------~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~  251 (343)
                                                              ....|.+||+.|...+.|+.|+++|.  ++++|.|.+|++
T Consensus       838 ~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHt--g~KPF~C~fC~~  915 (958)
T KOG1074|consen  838 NEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHT--GPKPFFCHFCEE  915 (958)
T ss_pred             ccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCC--CCCCccchhhhh
Confidence                                                    12579999999999999999999997  899999999999


Q ss_pred             CCCChHHHHHHHhhhcCcccc
Q psy5202         252 PFSVPSTLEKHMRKCVVNQNM  272 (343)
Q Consensus       252 ~f~~~~~l~~H~~~~~~~~~~  272 (343)
                      .|..+.+|+.||.+|+..+..
T Consensus       916 aFttrgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  916 AFTTRGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhhhhhccccccCCC
Confidence            999999999999999876654

>KOG3608|consensus

Probab=99.83  E-value=3.6e-21  Score=157.24  Aligned_cols=166  Identities=25%  Similarity=0.499  Sum_probs=105.5

Q ss_pred             cccccc--cccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCC--CCccccCCCCcchHHHHHHH
Q psy5202          91 NKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDG--DKEDREEGPSASSLAAAAAA  166 (343)
Q Consensus        91 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~--~~~~~~~~~~~~~~~~~~~~  166 (343)
                      .+.|..  |-+.|.++..|++|++.|.+++...|+.||..|.++..|..|++......  .+.+..+...+.........
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~H  256 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSH  256 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHH
Confidence            356654  88999999999999999999999999999999999999999987665322  22232222222221111111


Q ss_pred             HHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHH-ccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccc
Q psy5202         167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRS-HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYR  245 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  245 (343)
                      ..       +|     -..|+|++|+.+....+.|..|++. |...+||+|..|.+.|.+.+.|.+|..+|.   +..|+
T Consensus       257 v~-------rH-----vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS---~~~y~  321 (467)
T KOG3608|consen  257 VV-------RH-----VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS---KTVYQ  321 (467)
T ss_pred             HH-------Hh-----hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc---cccee
Confidence            10       11     1456677777777777777777664 566667777777777777777777766663   45566


Q ss_pred             cCC--CCCCCCChHHHHHHHhhhcCccc
Q psy5202         246 CRF--CEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       246 C~~--C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      |..  |.+.|.+...|++|++.+|.+.+
T Consensus       322 C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  322 CEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence            655  66666666666666665554433

>KOG3608|consensus

Probab=99.82  E-value=2.7e-20  Score=152.12  Aligned_cols=174  Identities=24%  Similarity=0.404  Sum_probs=131.9

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhcc--CCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHH
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHT--GEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAA  162 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~  162 (343)
                      .+.++|...|+.||..|.++..|-.|++.-+  ...+|+|..|.+.|.++..|..|+..|-..  +.+..+.-.......
T Consensus       201 ~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~--ykCplCdmtc~~~ss  278 (467)
T KOG3608|consen  201 THSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNC--YKCPLCDMTCSSASS  278 (467)
T ss_pred             hcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhc--ccccccccCCCChHH
Confidence            4567788888888888888888888876533  356788888888888888888888877532  333333322222211


Q ss_pred             HHHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHHhc-CC
Q psy5202         163 AAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHG-RL  239 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-~~  239 (343)
                      ...      .+.-+|   ...++|+|+.|++.|.+.+.|.+|+.+|. +..|+|..  |.+.|.+...|++|++.++ +.
T Consensus       279 L~~------H~r~rH---s~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  279 LTT------HIRYRH---SKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             HHH------HHHhhh---ccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCC
Confidence            111      111111   12489999999999999999999999988 77899988  9999999999999998766 55


Q ss_pred             CCcccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         240 GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       240 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      ...+|.|..|++.|.+-.+|..|+++.|+-+
T Consensus       349 np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  349 NPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             CCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            6678999999999999999999998877533

>KOG3576|consensus

Probab=99.81  E-value=8.7e-20  Score=137.89  Aligned_cols=87  Identities=32%  Similarity=0.601  Sum_probs=57.2

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc---------CCCCcccccCCCCCCCCCh
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG---------RLGKDVYRCRFCEMPFSVP  256 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~---------~~~~~~~~C~~C~~~f~~~  256 (343)
                      +.|..||+.|.+...|++|+++|+|.+||+|..|++.|..+-.|..|++..|         +...+.|.|+.||++-...
T Consensus       146 ~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~  225 (267)
T KOG3576|consen  146 HLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERP  225 (267)
T ss_pred             HHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCCh
Confidence            3455555555555555555555555566666666666665555555554322         1245778999999999999


Q ss_pred             HHHHHHHhhhcCcccc
Q psy5202         257 STLEKHMRKCVVNQNM  272 (343)
Q Consensus       257 ~~l~~H~~~~~~~~~~  272 (343)
                      ..+..|++.||.....
T Consensus       226 e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  226 EVYYLHLKLHHPFSPA  241 (267)
T ss_pred             hHHHHHHHhcCCCCHH
Confidence            9999999998877644

>KOG3576|consensus

Probab=99.81  E-value=1e-20  Score=142.87  Aligned_cols=110  Identities=31%  Similarity=0.645  Sum_probs=98.7

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCee---cCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHH
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFK---CTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA  163 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~---C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  163 (343)
                      .+...|.|.+|++.|.-...|.+|++-|..   .+   |..||+.|..-..|++|+++|++.                  
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~---vkr~lct~cgkgfndtfdlkrh~rthtgv------------------  171 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD---VKRHLCTFCGKGFNDTFDLKRHTRTHTGV------------------  171 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH---HHHHHHhhccCcccchhhhhhhhccccCc------------------
Confidence            345679999999999999999999999853   44   899999999999999999999987                  


Q ss_pred             HHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccC-----------CCceecCcCcccccChHHHHHH
Q psy5202         164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTG-----------EKPYKCELCSYACAQSSKLTRH  232 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~L~~H  232 (343)
                                          ++|+|..|++.|..+..|..|++.-+|           .+.|.|..||++-.....+..|
T Consensus       172 --------------------rpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h  231 (267)
T KOG3576|consen  172 --------------------RPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLH  231 (267)
T ss_pred             --------------------cccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHH
Confidence                                899999999999999999999876444           3569999999999999999999


Q ss_pred             HHHhc
Q psy5202         233 MKTHG  237 (343)
Q Consensus       233 ~~~h~  237 (343)
                      ++.|+
T Consensus       232 ~~~~h  236 (267)
T KOG3576|consen  232 LKLHH  236 (267)
T ss_pred             HHhcC
Confidence            99987

>KOG3623|consensus

Probab=99.69  E-value=1.1e-17  Score=148.89  Aligned_cols=122  Identities=29%  Similarity=0.601  Sum_probs=99.0

Q ss_pred             CCcccccccccccCChHHHHHHHHhccC--CCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTG--EKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAA  166 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
                      .....|++|.+.+.....|+.|++.-+.  +..|.|..|.++|..+..|.+||..|.........               
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~s---------------  272 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAIS---------------  272 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCccccc---------------
Confidence            4457899999999999999999885332  45699999999999999999999999754322100               


Q ss_pred             HHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHH
Q psy5202         167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                                .......+.|+|..||+.|+.+-.|+.|+|+|.|+|||.|+.|+++|.....+-.||..
T Consensus       273 ----------ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  273 ----------LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ----------ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                      00111237899999999999999999999999999999999999999999999888754

>KOG3623|consensus

Probab=99.67  E-value=1.2e-17  Score=148.77  Aligned_cols=107  Identities=27%  Similarity=0.587  Sum_probs=98.3

Q ss_pred             eecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccccCHH
Q psy5202         120 FKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCS  199 (343)
Q Consensus       120 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  199 (343)
                      ..|++|++.+.....|+.|++..|...                                    +..|.|.+|..+|..+.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekn------------------------------------e~nfsC~lCsytFAyRt  254 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKN------------------------------------EPNFSCMLCSYTFAYRT  254 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhC------------------------------------CCCCcchhhhhhhhhHH
Confidence            789999999999999999999877542                                    26789999999999999


Q ss_pred             HHHHHHHHccC-------------CCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHh
Q psy5202         200 NLTVHRRSHTG-------------EKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       200 ~l~~H~~~h~~-------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      .|.+|+.+|..             .+.|+|..||++|..+..|+.|+|+|.  |++||.|+.|+|+|+....+-.||-
T Consensus       255 QLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHS--GEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  255 QLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHS--GEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             HHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeec--CCCCcCCcccccccccCCccccccc
Confidence            99999999853             356999999999999999999999997  9999999999999999999999995

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.50  E-value=3.2e-14  Score=127.83  Aligned_cols=129  Identities=19%  Similarity=0.418  Sum_probs=98.4

Q ss_pred             ccccccccccCChHHHHHHHHhccC-------------------CCCeecCCCCccCCCHHHHHHHHHHhccCCCCcccc
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHTG-------------------EKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDRE  152 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~~-------------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  152 (343)
                      -.|+.|.+... ...|..|......                   ...+.|+.|++.|. ...|..|++.+|         
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H---------  476 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH---------  476 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC---------
Confidence            46888888766 3456677654321                   24467888888885 677888888875         


Q ss_pred             CCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCccccc--------
Q psy5202         153 EGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACA--------  224 (343)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~--------  224 (343)
                                                     .++.|+ ||+.+ .+..|..|+..|..++++.|.+|++.|.        
T Consensus       477 -------------------------------kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~  523 (567)
T PLN03086        477 -------------------------------EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDV  523 (567)
T ss_pred             -------------------------------CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccch
Confidence                                           568898 99755 6688999999999999999999999885        


Q ss_pred             --ChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         225 --QSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       225 --~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                        ....|..|...+   |.+++.|..||+.|..+ .|..|+..+|.
T Consensus       524 ~d~~s~Lt~HE~~C---G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        524 RDRLRGMSEHESIC---GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhhhHHHHHHhc---CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence              245788998886   78889999999887554 67888887774

>KOG3993|consensus

Probab=99.46  E-value=7.8e-14  Score=117.36  Aligned_cols=174  Identities=19%  Similarity=0.328  Sum_probs=116.7

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhh
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALN  170 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
                      -|.|..|...|.+...|.+|...-.-...|+|+.|++.|....+|..|+++|............+.........  ....
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~ra--e~~e  344 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRA--EVQE  344 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhh--hhhh
Confidence            49999999999999999999765444456999999999999999999999997654332111111000000000  0000


Q ss_pred             hcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCC--------------------------------------
Q psy5202         171 LCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEK--------------------------------------  212 (343)
Q Consensus       171 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--------------------------------------  212 (343)
                      ..  . .-......-|.|.+|++.|.....|+.|+.+|+...                                      
T Consensus       345 a~--r-sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~v  421 (500)
T KOG3993|consen  345 AE--R-SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEV  421 (500)
T ss_pred             cc--c-cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccce
Confidence            00  0 000112357999999999999999999988875310                                      


Q ss_pred             --------ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCccc
Q psy5202         213 --------PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       213 --------~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                              -..|++|+--+.++..--.|.+.-.  .+..|.|.+|.-.|.+...|.+|+.++|....
T Consensus       422 l~~a~sael~~pp~~~~ppsss~~sgg~~rlg~--~~q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  422 LYVAGSAELELPPYDGSPPSSSGSSGGYGRLGI--AEQGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             eeeeccccccCCCCCCCCcccCCCCCccccccc--hhhccccccchHhhhcCcchHhHhhhcChHHh
Confidence                    1235556655555444444433322  35569999999999999999999999996553

>PHA00733 hypothetical protein

Probab=99.30  E-value=2.6e-12  Score=94.45  Aligned_cols=82  Identities=18%  Similarity=0.273  Sum_probs=70.6

Q ss_pred             CCCcccccCcccccCHHHHHHH--HH---HccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChH
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVH--RR---SHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS  257 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~  257 (343)
                      ++.+.|.+|.+.|.....|..|  ++   .+++.++|.|+.|++.|.....|..|++.|.    .+|.|..|++.|....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~----~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE----HSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC----cCccCCCCCCccCCHH
Confidence            3789999999999888777766  22   2456889999999999999999999999762    4699999999999999


Q ss_pred             HHHHHHhhhcC
Q psy5202         258 TLEKHMRKCVV  268 (343)
Q Consensus       258 ~l~~H~~~~~~  268 (343)
                      .|..|+++.|.
T Consensus       114 sL~~H~~~~h~  124 (128)
T PHA00733        114 STLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHhcC
Confidence            99999998874

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.24  E-value=2.4e-11  Score=109.54  Aligned_cols=104  Identities=20%  Similarity=0.513  Sum_probs=86.9

Q ss_pred             CCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAA  168 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (343)
                      ++.+.|+.|++.|. ...|..|+..|+  +++.|+ |++.+ .+..|..|+..|.+.                       
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~-----------------------  502 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPL-----------------------  502 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCC-----------------------
Confidence            45689999999996 688999999986  789999 99755 678999999888766                       


Q ss_pred             hhhcCCCCcccccCCCCcccccCccccc----------CHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         169 LNLCLPNSHMKKESRRNDTCEFCGKVFK----------NCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                                     +++.|.+|++.|.          ....|..|...+ |.+++.|..||+.|.. ..|..|+...|
T Consensus       503 ---------------Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h  564 (567)
T PLN03086        503 ---------------RLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML-KEMDIHQIAVH  564 (567)
T ss_pred             ---------------CceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee-hhHHHHHHHhh
Confidence                           8899999999995          245899998885 8999999999988876 46778876543

>PHA00733 hypothetical protein

Probab=99.18  E-value=3.1e-11  Score=88.74  Aligned_cols=52  Identities=19%  Similarity=0.358  Sum_probs=40.7

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ++|.|+.|++.|.....|..|++.|  +.+|.|..|++.|.....|.+|+...|
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            6778888888888888888887765  346888888888888888888877655

>PHA02768 hypothetical protein; Provisional

Probab=99.03  E-value=1.2e-10  Score=69.99  Aligned_cols=40  Identities=20%  Similarity=0.507  Sum_probs=19.4

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChH
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSS  227 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  227 (343)
                      |.|+.||+.|.....|..|+++|+  ++|+|..|++.|...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccc
Confidence            445555555555555555555544  3444555555444433

>PHA02768 hypothetical protein; Provisional

Probab=99.00  E-value=1.7e-10  Score=69.41  Aligned_cols=44  Identities=20%  Similarity=0.505  Sum_probs=39.9

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHH
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLK  136 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  136 (343)
                      -|+|+.||+.|.....|..|+++|.  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3899999999999999999999998  6899999999998777653

>KOG3993|consensus

Probab=98.85  E-value=4.3e-10  Score=95.18  Aligned_cols=89  Identities=19%  Similarity=0.402  Sum_probs=74.8

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcC-------------------------
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGR-------------------------  238 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-------------------------  238 (343)
                      ..|.|.+|...|.+...|.+|....--..-|+|+.|++.|.-..+|..|.|.|.-                         
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            4689999999999999999997543333459999999999999999999999961                         


Q ss_pred             ------CCCcccccCCCCCCCCChHHHHHHHhhhcCcccc
Q psy5202         239 ------LGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNM  272 (343)
Q Consensus       239 ------~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  272 (343)
                            .....|.|.+|++.|.+...|++|+-+|+.....
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence                  1223599999999999999999999999865543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.84  E-value=2.8e-09  Score=54.77  Aligned_cols=25  Identities=56%  Similarity=1.050  Sum_probs=18.0

Q ss_pred             HHHHHHHHccCCCceecCcCccccc
Q psy5202         200 NLTVHRRSHTGEKPYKCELCSYACA  224 (343)
Q Consensus       200 ~l~~H~~~h~~~~~~~C~~C~~~f~  224 (343)
                      +|.+|+++|++++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667777777777777777777775

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.66  E-value=1.6e-08  Score=51.94  Aligned_cols=26  Identities=50%  Similarity=1.007  Sum_probs=24.0

Q ss_pred             HHHHHHHhccCCCCeecCCCCccCCC
Q psy5202         106 TLQAHRRNHTGEKPFKCTVCDHACSQ  131 (343)
Q Consensus       106 ~L~~H~~~h~~~~~~~C~~C~~~f~~  131 (343)
                      +|.+|+++|.++++|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58999999999999999999999964

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.60  E-value=7.1e-08  Score=59.61  Aligned_cols=51  Identities=20%  Similarity=0.417  Sum_probs=27.7

Q ss_pred             eecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|++|++ ..+...|..|....|....+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            55666666 34445566665554433344566666665433  25666665554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.58  E-value=3.2e-08  Score=65.81  Aligned_cols=45  Identities=29%  Similarity=0.552  Sum_probs=24.4

Q ss_pred             cccccCcccccCHHHHHHHHHH-ccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRS-HTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |.|..|++.|.....|..|++. |.   ++.|+.|++.|.   .|..|++.+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            4566666666666666666553 33   235666666555   355555443

>PHA00616 hypothetical protein

Probab=98.55  E-value=2.9e-08  Score=56.74  Aligned_cols=32  Identities=22%  Similarity=0.369  Sum_probs=16.2

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      |+|+.||+.|.....|..|++.|+|++++.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            44555555555555555555555555554444

>PHA00616 hypothetical protein

Probab=98.55  E-value=3.1e-08  Score=56.64  Aligned_cols=34  Identities=15%  Similarity=0.272  Sum_probs=29.8

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      +|+|..||+.|.....|.+|++.|++++++.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5889999999999999999999999988888765

>PHA00732 hypothetical protein

Probab=98.40  E-value=2e-07  Score=61.97  Aligned_cols=47  Identities=19%  Similarity=0.589  Sum_probs=39.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      ||.|..|++.|.....|+.|++.++  .  ++.|+.||+.|.   .|..|+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H--~--~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH--T--LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc--C--CCccCCCCCEeC---Chhhhhccc
Confidence            6899999999999999999998643  1  358999999998   588898654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.34  E-value=1.1e-06  Score=54.30  Aligned_cols=23  Identities=22%  Similarity=0.485  Sum_probs=10.0

Q ss_pred             eecCCCCccCCCHHHHHHHHHHhc
Q psy5202         120 FKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       120 ~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.|++|++ ..+...|..|....|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H   25 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEH   25 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHC
Confidence            44444444 233344444444433

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.16  E-value=8.7e-07  Score=44.21  Aligned_cols=22  Identities=41%  Similarity=0.922  Sum_probs=11.0

Q ss_pred             eecCcCcccccChHHHHHHHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      |+|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.15  E-value=1.8e-06  Score=42.99  Aligned_cols=22  Identities=45%  Similarity=1.025  Sum_probs=14.5

Q ss_pred             cccCCCCCCCCChHHHHHHHhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.04  E-value=1.2e-06  Score=71.94  Aligned_cols=55  Identities=27%  Similarity=0.577  Sum_probs=45.4

Q ss_pred             CCceecCc--CcccccChHHHHHHHHHhc-----------------CCCCcccccCCCCCCCCChHHHHHHHhh
Q psy5202         211 EKPYKCEL--CSYACAQSSKLTRHMKTHG-----------------RLGKDVYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       211 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~-----------------~~~~~~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      ++||+|++  |.+.+.....|+.|+..-|                 ....+||+|++|+|+|+....|+.|+..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            58999976  9999999999999976422                 1345899999999999999999999753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.03  E-value=2.6e-06  Score=42.91  Aligned_cols=23  Identities=35%  Similarity=0.795  Sum_probs=10.8

Q ss_pred             cccCCCCCCCCChHHHHHHHhhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555544

...

>KOG2231|consensus

Probab=98.01  E-value=1.5e-05  Score=73.52  Aligned_cols=71  Identities=25%  Similarity=0.538  Sum_probs=52.7

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcC------cccccChHHHHHHHHHhcCCCCcccccC--CCC-CCCCC
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC------SYACAQSSKLTRHMKTHGRLGKDVYRCR--FCE-MPFSV  255 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~L~~H~~~h~~~~~~~~~C~--~C~-~~f~~  255 (343)
                      .-.|..|...|.....|.+|++.++    |.|..|      +..|.....|..|.+.+|      |.|.  .|- +.|..
T Consensus       182 hp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H------flCE~~~C~~~~f~~  251 (669)
T KOG2231|consen  182 HPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH------FLCEEEFCRTKKFYV  251 (669)
T ss_pred             CccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC------ccccccccccceeee
Confidence            4579999999999999999998766    566666      345778899999998877      7787  565 34444


Q ss_pred             hHHHHHHHhh
Q psy5202         256 PSTLEKHMRK  265 (343)
Q Consensus       256 ~~~l~~H~~~  265 (343)
                      .-.+..|++.
T Consensus       252 ~~~~ei~lk~  261 (669)
T KOG2231|consen  252 AFELEIELKA  261 (669)
T ss_pred             hhHHHHHHHh
Confidence            4455555553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.95  E-value=3.9e-06  Score=59.68  Aligned_cols=74  Identities=23%  Similarity=0.502  Sum_probs=22.3

Q ss_pred             ccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       187 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      .|.+|+..|.+...|..|+...++...   + ....+.....+..+++..   -...+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~---~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKK---VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccc---c-cccccccccccccccccc---cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            489999999999999999977555321   1 222233445555555433   123699999999999999999999975


Q ss_pred             c
Q psy5202         267 V  267 (343)
Q Consensus       267 ~  267 (343)
                      +
T Consensus        74 ~   74 (100)
T PF12756_consen   74 H   74 (100)
T ss_dssp             T
T ss_pred             c
Confidence            3

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.93  E-value=9.7e-06  Score=40.76  Aligned_cols=24  Identities=33%  Similarity=0.819  Sum_probs=15.0

Q ss_pred             eecCcCcccccChHHHHHHHHHhc
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.|++|++.|.+...|+.|++.||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776653

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.91  E-value=8.2e-06  Score=57.99  Aligned_cols=24  Identities=33%  Similarity=0.630  Sum_probs=0.0

Q ss_pred             ecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         121 KCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       121 ~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      +|.+|+..|.+...|..|+...|+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~   24 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG   24 (100)
T ss_dssp             ------------------------
T ss_pred             Cccccccccccccccccccccccc
Confidence            488888888888888888877665

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.81  E-value=8.2e-06  Score=42.40  Aligned_cols=24  Identities=33%  Similarity=0.620  Sum_probs=13.1

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|..|++.|.+...|..|++.|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhc
Confidence            455555555555555555555443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.76  E-value=7.2e-06  Score=67.48  Aligned_cols=53  Identities=32%  Similarity=0.638  Sum_probs=45.9

Q ss_pred             CCCCccccc--CcccccCHHHHHHHHHH-cc------------------CCCceecCcCcccccChHHHHHHHH
Q psy5202         182 SRRNDTCEF--CGKVFKNCSNLTVHRRS-HT------------------GEKPYKCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       182 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h~------------------~~~~~~C~~C~~~f~~~~~L~~H~~  234 (343)
                      ++++|+|++  |.++|.....|+.|+.- |.                  ..|||+|++|+++++....|+.|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            459999998  99999999999999874 31                  2489999999999999999998864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.70  E-value=2.3e-05  Score=40.71  Aligned_cols=25  Identities=40%  Similarity=0.804  Sum_probs=16.6

Q ss_pred             cccccccccccCChHHHHHHHHhcc
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      +|+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777766654

>KOG2231|consensus

Probab=97.69  E-value=0.0001  Score=68.27  Aligned_cols=103  Identities=22%  Similarity=0.445  Sum_probs=74.2

Q ss_pred             ecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCccccc----------
Q psy5202         121 KCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF----------  190 (343)
Q Consensus       121 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~----------  190 (343)
                      .|..| ..|.+...|+.|+...|.                                        .+.|.+          
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~----------------------------------------~~~c~lC~~~~kif~~  155 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK----------------------------------------LHLCSLCLQNLKIFIN  155 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh----------------------------------------hhccccccccceeeee
Confidence            46666 666688999999976663                                        233333          


Q ss_pred             CcccccCHHHHHHHHHHc-cCCCc----eecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC------CCCCChHHH
Q psy5202         191 CGKVFKNCSNLTVHRRSH-TGEKP----YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE------MPFSVPSTL  259 (343)
Q Consensus       191 C~~~f~~~~~l~~H~~~h-~~~~~----~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~------~~f~~~~~l  259 (343)
                      +.+.| ....|..|++.- .+++.    -.|..|...|.....|.+|++.+|      |.|.+|.      ..|.....|
T Consensus       156 e~k~Y-t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h------~~chfC~~~~~~neyy~~~~dL  228 (669)
T KOG2231|consen  156 ERKLY-TRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH------EFCHFCDYKTGQNEYYNDYDDL  228 (669)
T ss_pred             eeehe-hHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce------eheeecCcccccchhcccchHH
Confidence            33444 566788887652 11221    369999999999999999999876      6677774      568888999


Q ss_pred             HHHHhhhcCccc
Q psy5202         260 EKHMRKCVVNQN  271 (343)
Q Consensus       260 ~~H~~~~~~~~~  271 (343)
                      ..|.|..|..-.
T Consensus       229 e~HfR~~HflCE  240 (669)
T KOG2231|consen  229 EEHFRKGHFLCE  240 (669)
T ss_pred             HHHhhhcCcccc
Confidence            999999886554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.48  E-value=0.00012  Score=61.22  Aligned_cols=135  Identities=21%  Similarity=0.438  Sum_probs=90.6

Q ss_pred             cccccc--cccccCChHHHHHHHHhccCCCCeecCCCC---ccCCCH------HHHHHHHHHhccCCCCccccCCCCcch
Q psy5202          91 NKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTVCD---HACSQS------AKLKKHMKIHDEDGDKEDREEGPSASS  159 (343)
Q Consensus        91 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~---~~f~~~------~~L~~H~~~h~~~~~~~~~~~~~~~~~  159 (343)
                      .|.|+.  |..+......|..|.+..++  .+.|.+|-   +.|...      ..|..|...-..+.       +     
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~-------G-----  216 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEE-------G-----  216 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCcccc-------C-----
Confidence            377876  77777778889999887544  37788874   234333      33444332111100       0     


Q ss_pred             HHHHHHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcc-------cccChHHHHHH
Q psy5202         160 LAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSY-------ACAQSSKLTRH  232 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~L~~H  232 (343)
                                            -+..-.|..|...|-+-..|.+|++..+.    +|.+|++       -|..-..|.+|
T Consensus       217 ----------------------FKGHP~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~H  270 (493)
T COG5236         217 ----------------------FKGHPLCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAH  270 (493)
T ss_pred             ----------------------cCCCchhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHH
Confidence                                  01344699999999999999999997553    4666654       37888899999


Q ss_pred             HHHhcCCCCcccccCC--CC----CCCCChHHHHHHHhhhcCccc
Q psy5202         233 MKTHGRLGKDVYRCRF--CE----MPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       233 ~~~h~~~~~~~~~C~~--C~----~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      .+.-|      |.|.+  |-    +.|.....|..|+...|+...
T Consensus       271 F~~~h------y~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~~~  309 (493)
T COG5236         271 FRNAH------YCCTFQTCRVGKCYVFPYHTELLEHLTRFHKVNA  309 (493)
T ss_pred             hhcCc------eEEEEEEEecCcEEEeccHHHHHHHHHHHhhccc
Confidence            86543      66654  53    579999999999988886553

>KOG1146|consensus

Probab=97.37  E-value=0.00028  Score=69.33  Aligned_cols=160  Identities=20%  Similarity=0.297  Sum_probs=98.7

Q ss_pred             cccccccccCChHHHHHHHH-hccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhh
Q psy5202          93 ECEFCGKKFKYENTLQAHRR-NHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNL  171 (343)
Q Consensus        93 ~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      .|..|+..+.....+.-|+. .|...+.|+|+.|+..|.....|..||+..|.+........+..             ..
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~-------------~~  504 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQN-------------HP  504 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccc-------------cc
Confidence            46777888887777777765 36667889999999999999999999998765532211000000             00


Q ss_pred             cCCCCcccccCCCCcccccCcccccCHHHHHHHHHH--ccCC--------------------------------------
Q psy5202         172 CLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRS--HTGE--------------------------------------  211 (343)
Q Consensus       172 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~--------------------------------------  211 (343)
                      .........-+.++|.|..|...+....+|.+|++.  |..+                                      
T Consensus       505 ~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~p  584 (1406)
T KOG1146|consen  505 RLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGP  584 (1406)
T ss_pred             cccccccccCCCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCC
Confidence            000001112234789999999999999999999874  2211                                      


Q ss_pred             ---CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         212 ---KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       212 ---~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                         -.|.|.+|++...-...|+-||..-.. -..+.-|-.|+-.+.....+..|.+-+
T Consensus       585 ktkP~~~C~vc~yetniarnlrihmtss~~-s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  585 KTKPSWRCEVCSYETNIARNLRIHMTASPS-SSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CCCCCcchhhhcchhhhhhccccccccCCC-CCChHHHhhhcchhhccccccCcCCCC
Confidence               125666666666666666666654221 223355555666655555555555444

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.29  E-value=0.00014  Score=36.48  Aligned_cols=22  Identities=55%  Similarity=1.105  Sum_probs=10.3

Q ss_pred             eecCcCcccccChHHHHHHHHHh
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |+|+.|++... ...|.+|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            44555555554 55555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.26  E-value=0.00025  Score=36.12  Aligned_cols=23  Identities=43%  Similarity=0.800  Sum_probs=17.4

Q ss_pred             cccCCCCCCCCChHHHHHHHhhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            56778888888888888887754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.26  E-value=0.00036  Score=40.92  Aligned_cols=31  Identities=23%  Similarity=0.439  Sum_probs=14.2

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEK  118 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  118 (343)
                      .+.|-.|++|+..+....+|++|+..+++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3445556666666666666666655544433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2785|consensus

Probab=97.24  E-value=0.00091  Score=57.15  Aligned_cols=60  Identities=23%  Similarity=0.375  Sum_probs=46.9

Q ss_pred             eecCcCcccccChHHHHHHHHHhcCC------------------C---CcccccCCCC---CCCCChHHHHHHHhhhcCc
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHGRL------------------G---KDVYRCRFCE---MPFSVPSTLEKHMRKCVVN  269 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~~~------------------~---~~~~~C~~C~---~~f~~~~~l~~H~~~~~~~  269 (343)
                      -.|-.|++.|.....-..||..+|+.                  |   ..-|.|-.|.   +.|.+....+.||+....+
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K~HC  246 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDKGHC  246 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhccCc
Confidence            46999999999999999999988731                  0   1127788898   9999999999999865444


Q ss_pred             cccc
Q psy5202         270 QNMK  273 (343)
Q Consensus       270 ~~~~  273 (343)
                      +-..
T Consensus       247 kl~y  250 (390)
T KOG2785|consen  247 KLPY  250 (390)
T ss_pred             ccCC
Confidence            4433

>smart00355 ZnF_C2H2 zinc finger

Probab=97.20  E-value=0.00029  Score=35.86  Aligned_cols=24  Identities=38%  Similarity=0.760  Sum_probs=19.2

Q ss_pred             eecCcCcccccChHHHHHHHHHhc
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578888888888888888887663

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=97.13  E-value=0.00043  Score=63.37  Aligned_cols=145  Identities=24%  Similarity=0.351  Sum_probs=92.6

Q ss_pred             CcccccccccccCChHHHHHHHH--hccCC--CCeecC--CCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHH
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRR--NHTGE--KPFKCT--VCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA  163 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  163 (343)
                      .++.|..|...|.....|.+|.+  .|.++  +++.|+  .|++.|.....+.+|...|.+.....+.............
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            47999999999999999999999  89999  999999  7999999999999999999876544332221111100000


Q ss_pred             HHHHHhhhcCCCCcccccCCCCccccc--CcccccCHHHHHHHHHHccCCC--ceecCcCcccccChHHHHHHHHHhc
Q psy5202         164 AAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEK--PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ...   ................+.|..  |-..+.....+..|...|....  .+.|..|...|.....+..|++.|.
T Consensus       368 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         368 NNE---PPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             CCC---CccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccc
Confidence            000   000000000011112333322  5556666666666666665555  3556778888888888888877774

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.12  E-value=0.00034  Score=58.54  Aligned_cols=107  Identities=27%  Similarity=0.504  Sum_probs=76.5

Q ss_pred             eecCC--CCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcc----
Q psy5202         120 FKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGK----  193 (343)
Q Consensus       120 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~----  193 (343)
                      |.|+.  |.........|..|.+..|+.                                        +.|.+|-.    
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~----------------------------------------~~C~~C~~nKk~  191 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF----------------------------------------VLCSECIGNKKD  191 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc----------------------------------------EEhHhhhcCccc
Confidence            88986  777777788999999987743                                        45555532    


Q ss_pred             -----cccCHHHHHHHHHHccCCCce----ecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCC-------CCCChH
Q psy5202         194 -----VFKNCSNLTVHRRSHTGEKPY----KCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEM-------PFSVPS  257 (343)
Q Consensus       194 -----~f~~~~~l~~H~~~h~~~~~~----~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~-------~f~~~~  257 (343)
                           ..-....|..|...-..+.-|    .|..|...|..-..|.+|+|..|   +   +|-+|++       -|....
T Consensus       192 F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H---E---~ChICD~v~p~~~QYFK~Y~  265 (493)
T COG5236         192 FWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH---E---ACHICDMVGPIRYQYFKSYE  265 (493)
T ss_pred             CccceeeeecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh---h---hhhhhhccCccchhhhhCHH
Confidence                 233455677776543323223    59999999999999999999866   3   4777764       489999


Q ss_pred             HHHHHHhhhcCcccc
Q psy5202         258 TLEKHMRKCVVNQNM  272 (343)
Q Consensus       258 ~l~~H~~~~~~~~~~  272 (343)
                      .|..|.+.-|..-.+
T Consensus       266 ~Le~HF~~~hy~ct~  280 (493)
T COG5236         266 DLEAHFRNAHYCCTF  280 (493)
T ss_pred             HHHHHhhcCceEEEE
Confidence            999999876654433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.12  E-value=0.00062  Score=39.93  Aligned_cols=26  Identities=31%  Similarity=0.661  Sum_probs=10.2

Q ss_pred             CceecCcCcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .|-.|++|+..+....+|++|+.++|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHh
Confidence            34445555555555555555544433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG1146|consensus

Probab=97.12  E-value=7e-05  Score=73.33  Aligned_cols=150  Identities=20%  Similarity=0.309  Sum_probs=96.1

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhcc-------------------------CCCCeecCCCCccCCCHHHHHHHHHH
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHT-------------------------GEKPFKCTVCDHACSQSAKLKKHMKI  141 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~L~~H~~~  141 (343)
                      .-.+.|+|+.|++.|+....|..|||..+                         +.++|.|..|...+..+.+|.+|++.
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            34578999999999999999999999721                         12679999999999999999999975


Q ss_pred             hccCCCCccccC--CCCcchHHHHHHH--HHhhhcCCCCccc-ccCCCCcccccCcccccCHHHHHHHHHH-ccCCCcee
Q psy5202         142 HDEDGDKEDREE--GPSASSLAAAAAA--AALNLCLPNSHMK-KESRRNDTCEFCGKVFKNCSNLTVHRRS-HTGEKPYK  215 (343)
Q Consensus       142 h~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~  215 (343)
                      --.....+..+.  +............  ............. ......|.|.+|+....-..+|+.|+.. ++-..|.-
T Consensus       541 ~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~p~~  620 (1406)
T KOG1146|consen  541 DLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSPPSL  620 (1406)
T ss_pred             HhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCChHH
Confidence            321111111000  0000000000000  0000001111111 2234679999999999999999999876 44445577


Q ss_pred             cCcCcccccChHHHHHHHHHh
Q psy5202         216 CELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       216 C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |..|+..+.....+..|.+.+
T Consensus       621 ~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  621 VLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             HhhhcchhhccccccCcCCCC
Confidence            888888888887777777766

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.06  E-value=0.00055  Score=34.23  Aligned_cols=23  Identities=39%  Similarity=0.846  Sum_probs=12.8

Q ss_pred             eecCCCCccCCCHHHHHHHHHHhc
Q psy5202         120 FKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       120 ~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |+|+.|++... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666554

>PRK04860 hypothetical protein; Provisional

Probab=96.87  E-value=0.0005  Score=52.64  Aligned_cols=36  Identities=25%  Similarity=0.572  Sum_probs=17.5

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcCccccc
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACA  224 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  224 (343)
                      +|.|. |+.   ....+.+|.++|.++++|+|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            34554 544   3334445555555555555555554443

>PRK04860 hypothetical protein; Provisional

Probab=96.87  E-value=0.00051  Score=52.59  Aligned_cols=40  Identities=33%  Similarity=0.765  Sum_probs=34.7

Q ss_pred             CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChH
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS  257 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~  257 (343)
                      -+|.|. |+.   ....+++|.++|.  ++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~--g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVR--GEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhc--CCccEECCCCCceeEEec
Confidence            479998 997   7788999999997  889999999999987543

>KOG2785|consensus

Probab=96.86  E-value=0.0041  Score=53.27  Aligned_cols=146  Identities=19%  Similarity=0.345  Sum_probs=92.0

Q ss_pred             cccccccccccCChHHHHHHHHh--cc-----------------------------------CCCCeecCCCCccCCCHH
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRN--HT-----------------------------------GEKPFKCTVCDHACSQSA  133 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~--h~-----------------------------------~~~~~~C~~C~~~f~~~~  133 (343)
                      -|.|.-|...|.+...-+.|+++  |.                                   ..-++.|..|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            38999999999999888889875  31                                   113589999999999999


Q ss_pred             HHHHHHHHhccCCCCccc---cCCCCcch----------HHH----HHHHHHhhhc---------------CCCCccccc
Q psy5202         134 KLKKHMKIHDEDGDKEDR---EEGPSASS----------LAA----AAAAAALNLC---------------LPNSHMKKE  181 (343)
Q Consensus       134 ~L~~H~~~h~~~~~~~~~---~~~~~~~~----------~~~----~~~~~~~~~~---------------~~~~~~~~~  181 (343)
                      ....|++...........   ..+.....          +..    ..........               +........
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            999998754321111000   00000000          000    0000000000               000000111


Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCC-----------------------CceecCcCc---ccccChHHHHHHHHH
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGE-----------------------KPYKCELCS---YACAQSSKLTRHMKT  235 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~L~~H~~~  235 (343)
                      ...|--|-+|++.+.....-..||..+||-                       .-|.|-.|.   +.|.+....+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            123467999999999999999999998873                       247899999   999999999999975


Q ss_pred             h
Q psy5202         236 H  236 (343)
Q Consensus       236 h  236 (343)
                      -
T Consensus       243 K  243 (390)
T KOG2785|consen  243 K  243 (390)
T ss_pred             c
Confidence            3

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.82  E-value=0.00089  Score=33.81  Aligned_cols=20  Identities=20%  Similarity=0.747  Sum_probs=9.6

Q ss_pred             ecCcCcccccChHHHHHHHH
Q psy5202         215 KCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       215 ~C~~C~~~f~~~~~L~~H~~  234 (343)
                      .|.+|++.|.+...|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            44444444444444444443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.82  E-value=0.00056  Score=34.56  Aligned_cols=23  Identities=30%  Similarity=0.778  Sum_probs=21.1

Q ss_pred             cccCCCCCCCCChHHHHHHHhhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999854

>KOG2482|consensus

Probab=96.62  E-value=0.0094  Score=50.18  Aligned_cols=132  Identities=19%  Similarity=0.296  Sum_probs=85.2

Q ss_pred             CCeecCCCCccC-CCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCccccc
Q psy5202         118 KPFKCTVCDHAC-SQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFK  196 (343)
Q Consensus       118 ~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~  196 (343)
                      ...+|-+|...+ ..++....|+-..|+-.......  ......-......              .-..+.|-.|.+.|.
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDn--iVyvnelLehLke--------------kL~r~~CLyCekifr  206 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDN--IVYVNELLEHLKE--------------KLERLRCLYCEKIFR  206 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcc--eeeHHHHHHHHHH--------------HHhhheeeeeccccC
Confidence            346899998766 45667777876655431110000  0000000000000              114678999999999


Q ss_pred             CHHHHHHHHHH--ccCC----------------------------------------------------Cc--eecCcCc
Q psy5202         197 NCSNLTVHRRS--HTGE----------------------------------------------------KP--YKCELCS  220 (343)
Q Consensus       197 ~~~~l~~H~~~--h~~~----------------------------------------------------~~--~~C~~C~  220 (343)
                      ++..|+.||+.  |..-                                                    .+  .+|-.|.
T Consensus       207 dkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~  286 (423)
T KOG2482|consen  207 DKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCT  286 (423)
T ss_pred             CcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeec
Confidence            99999999985  3210                                                    11  4799999


Q ss_pred             ccccChHHHHHHHHHhcC-------------------------CCCcccccCCCCCCCCChHHHHHHHhh
Q psy5202         221 YACAQSSKLTRHMKTHGR-------------------------LGKDVYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       221 ~~f~~~~~L~~H~~~h~~-------------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      ...-+...|..||+.-|.                         .....-.|-.|...|.....|..||.-
T Consensus       287 ~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  287 NFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             cchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            988889999999987551                         112234688999999999999999964

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.49  E-value=0.00084  Score=34.65  Aligned_cols=22  Identities=32%  Similarity=0.762  Sum_probs=16.0

Q ss_pred             cccCCCCCCCCChHHHHHHHhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.47  E-value=0.0023  Score=32.20  Aligned_cols=22  Identities=41%  Similarity=0.872  Sum_probs=14.6

Q ss_pred             cccCCCCCCCCChHHHHHHHhhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      ..|+.||+.| ....|.+|++.|
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~C   24 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKIC   24 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHhc
Confidence            4577777777 666677776543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.02  E-value=0.0019  Score=33.33  Aligned_cols=22  Identities=27%  Similarity=0.718  Sum_probs=15.4

Q ss_pred             eecCcCcccccChHHHHHHHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.80  E-value=0.016  Score=48.81  Aligned_cols=54  Identities=33%  Similarity=0.591  Sum_probs=43.1

Q ss_pred             cccccccccccCChHHHHHHHHh--ccCC---------------------------------------------------
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRN--HTGE---------------------------------------------------  117 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~--h~~~---------------------------------------------------  117 (343)
                      .+.|-.|.+.|..+..|+.||+.  |...                                                   
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            58899999999999999999985  4221                                                   


Q ss_pred             -C--CeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         118 -K--PFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       118 -~--~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                       .  ...|-+|....-+...|..||+..|.
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe  304 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHE  304 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHH
Confidence             1  15888888888888888889887764

>KOG4173|consensus

Probab=95.44  E-value=0.01  Score=46.21  Aligned_cols=82  Identities=23%  Similarity=0.498  Sum_probs=63.2

Q ss_pred             CCccccc--CcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc--------CCCCcccccCC--CCC
Q psy5202         184 RNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG--------RLGKDVYRCRF--CEM  251 (343)
Q Consensus       184 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--------~~~~~~~~C~~--C~~  251 (343)
                      ..|.|++  |...|.....+..|-..-++   -.|..|.+.|.+...|-.|+.--|        ..|...|.|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            5677877  77888888777777655443   369999999999999999975432        24677899954  999


Q ss_pred             CCCChHHHHHHHhhhcC
Q psy5202         252 PFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       252 ~f~~~~~l~~H~~~~~~  268 (343)
                      .|.+...-..|+-..|.
T Consensus       155 KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhHHHHhcc
Confidence            99999999999876554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.39  E-value=0.014  Score=29.29  Aligned_cols=19  Identities=26%  Similarity=0.705  Sum_probs=10.1

Q ss_pred             ecCcCcccccChHHHHHHHH
Q psy5202         215 KCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       215 ~C~~C~~~f~~~~~L~~H~~  234 (343)
                      .|+.||+.| ....|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4455555544

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.88  E-value=0.072  Score=37.78  Aligned_cols=109  Identities=22%  Similarity=0.339  Sum_probs=62.7

Q ss_pred             ccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhh
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNL  171 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (343)
                      |.|+.|+-..              =+-|..|+.|+-.......|.|-.  ||--......+. +.               
T Consensus         2 Y~CPrC~skv--------------C~LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev-~~---------------   49 (112)
T TIGR00622         2 YFCPQCRAKV--------------CELPVECPICGLTLILSTHLARSY--HHLFPLKAFQEI-PL---------------   49 (112)
T ss_pred             ccCCCCCCCc--------------cCCCCcCCcCCCEEeccchHHHhh--hccCCCcccccc-cc---------------
Confidence            6777776544              235678999998888877777652  331100000000 00               


Q ss_pred             cCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC
Q psy5202         172 CLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE  250 (343)
Q Consensus       172 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~  250 (343)
                              ......-.|--|...|........  ..-.....|+|+.|...|-..-++..|...|.        |+.|.
T Consensus        50 --------~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~--------CPGC~  110 (112)
T TIGR00622        50 --------EEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNVFCVDCDVFVHESLHC--------CPGCI  110 (112)
T ss_pred             --------cccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCccccccchhhhhhccC--------CcCCC
Confidence                    000022348888888876431110  00122346889999999888888888877773        77775

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.66  E-value=0.027  Score=30.89  Aligned_cols=23  Identities=22%  Similarity=0.732  Sum_probs=19.9

Q ss_pred             ccccCCCCCCCCChHHHHHHHhh
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      +|.|.+|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.36  E-value=0.02  Score=31.00  Aligned_cols=12  Identities=25%  Similarity=0.927  Sum_probs=6.7

Q ss_pred             cccccCcccccC
Q psy5202         186 DTCEFCGKVFKN  197 (343)
Q Consensus       186 ~~C~~C~~~f~~  197 (343)
                      |+|..||..+..
T Consensus         2 ~~C~~CGy~y~~   13 (33)
T cd00350           2 YVCPVCGYIYDG   13 (33)
T ss_pred             EECCCCCCEECC
Confidence            456666655543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG4173|consensus

Probab=94.24  E-value=0.021  Score=44.50  Aligned_cols=26  Identities=27%  Similarity=0.473  Sum_probs=18.7

Q ss_pred             CCCceecC--cCcccccChHHHHHHHHH
Q psy5202         210 GEKPYKCE--LCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       210 ~~~~~~C~--~C~~~f~~~~~L~~H~~~  235 (343)
                      |...|+|-  .|+..|.+...-..|+-.
T Consensus       141 G~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  141 GQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             CccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            45567884  488888888888888643

>KOG2893|consensus

Probab=93.84  E-value=0.015  Score=46.42  Aligned_cols=47  Identities=28%  Similarity=0.572  Sum_probs=38.4

Q ss_pred             cccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202          93 ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus        93 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      -|=+|++.|.+..-|..|++.    +.|+|.+|.+...+--.|..|....|
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            488999999999999999876    34999999998887777777754443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.76  E-value=0.027  Score=33.66  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=16.7

Q ss_pred             CCcccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         240 GKDVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       240 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |+..++|+.||..|....++.+|+.+-|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4555666666666666666666665544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.72  E-value=0.053  Score=29.71  Aligned_cols=23  Identities=22%  Similarity=0.598  Sum_probs=18.4

Q ss_pred             ceecCcCcccccChHHHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      +|.|.+|+..|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.42  E-value=0.048  Score=38.77  Aligned_cols=30  Identities=23%  Similarity=0.424  Sum_probs=24.0

Q ss_pred             eecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCCh
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVP  256 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~  256 (343)
                      ..|+.||.+|...             ++.|..|++||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-------------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-------------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-------------CCCCccCCCCCCccCcc
Confidence            4689999888762             56788899999988766

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.36  E-value=0.017  Score=52.90  Aligned_cols=54  Identities=35%  Similarity=0.632  Sum_probs=49.6

Q ss_pred             CCcccccCcccccCHHHHHHHHH--HccCC--CceecC--cCcccccChHHHHHHHHHhc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRR--SHTGE--KPYKCE--LCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ..+.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc
Confidence            36889999999999999999999  89999  999999  79999999999999988886

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.28  E-value=0.18  Score=36.15  Aligned_cols=25  Identities=36%  Similarity=0.541  Sum_probs=22.5

Q ss_pred             ccc----CCCCCCCCChHHHHHHHhhhcC
Q psy5202         244 YRC----RFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       244 ~~C----~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      |.|    ..|++.+.+...+..|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            789    9999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.20  E-value=0.04  Score=32.97  Aligned_cols=29  Identities=21%  Similarity=0.387  Sum_probs=22.3

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhc
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  114 (343)
                      -.++.-+.|+.|+..|.....+.+|+..-
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            34666788888888888888888887643

>KOG2893|consensus

Probab=92.98  E-value=0.023  Score=45.34  Aligned_cols=41  Identities=27%  Similarity=0.661  Sum_probs=24.5

Q ss_pred             cccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHH
Q psy5202         188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH  232 (343)
Q Consensus       188 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  232 (343)
                      |-+|++.|.+..-|..|++.    +-|+|.+|.+...+--.|..|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            66666666666666666554    236666666655555555555

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=92.89  E-value=0.079  Score=28.89  Aligned_cols=11  Identities=27%  Similarity=0.993  Sum_probs=6.8

Q ss_pred             eecCcCccccc
Q psy5202         214 YKCELCSYACA  224 (343)
Q Consensus       214 ~~C~~C~~~f~  224 (343)
                      |+|..||+.+.
T Consensus         3 ~~C~~CG~i~~   13 (34)
T cd00729           3 WVCPVCGYIHE   13 (34)
T ss_pred             EECCCCCCEeE
Confidence            66777775543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.69  E-value=0.25  Score=35.45  Aligned_cols=54  Identities=17%  Similarity=0.391  Sum_probs=43.5

Q ss_pred             CcccccccccccCChHHHHHHHHh-ccCC-----------------------------------------CCeec----C
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRN-HTGE-----------------------------------------KPFKC----T  123 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~-----------------------------------------~~~~C----~  123 (343)
                      +-..|..|+....- ..+..|++. |+..                                         .-|.|    .
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            45689999988775 888999884 4221                                         12899    9


Q ss_pred             CCCccCCCHHHHHHHHHHhcc
Q psy5202         124 VCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       124 ~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      .|++.+.+...|.+|++.+|+
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=90.80  E-value=0.51  Score=33.55  Aligned_cols=77  Identities=18%  Similarity=0.246  Sum_probs=52.1

Q ss_pred             CCcccccCcccccCHHHHHHHHHHcc-------CCC-------ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHT-------GEK-------PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~-------~~~-------~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      -+..|+.||.+......|.+--  |+       .+.       ...|--|...|........=  .  ......|+|+.|
T Consensus        14 LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~--~~~~~~y~C~~C   87 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--E--LKDSHRYVCAVC   87 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCccccccc--c--cccccceeCCCC
Confidence            5678999999998887776542  22       011       12399999999764311100  0  013457999999


Q ss_pred             CCCCCChHHHHHHHhhh
Q psy5202         250 EMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       250 ~~~f~~~~~l~~H~~~~  266 (343)
                      ...|--.-++..|..-|
T Consensus        88 ~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        88 KNVFCVDCDVFVHESLH  104 (112)
T ss_pred             CCccccccchhhhhhcc
Confidence            99999999999997654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.78  E-value=0.18  Score=35.92  Aligned_cols=32  Identities=25%  Similarity=0.608  Sum_probs=26.1

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccCh
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQS  226 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  226 (343)
                      ....|+.||+.|-..           +..|-.|++||..|.-.
T Consensus         8 tKR~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    8 TKRTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CcccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            456899999999653           34788999999999766

The function of members of this family is unknown.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=90.37  E-value=0.18  Score=36.44  Aligned_cols=33  Identities=9%  Similarity=0.053  Sum_probs=24.0

Q ss_pred             eecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTL  259 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l  259 (343)
                      ..|+.||++|...             ++.|..|++||..|.-...+
T Consensus        10 r~Cp~cg~kFYDL-------------nk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300        10 RICPNTGSKFYDL-------------NRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             ccCCCcCcccccc-------------CCCCccCCCcCCccCcchhh
Confidence            5688888888652             56788899999887655333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.36  E-value=0.18  Score=38.71  Aligned_cols=23  Identities=26%  Similarity=0.807  Sum_probs=17.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE  250 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~  250 (343)
                      .|.|++||+.+.               |+.|-+||+||
T Consensus       134 ~~vC~vCGy~~~---------------ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTHE---------------GEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCccc---------------CCCCCcCCCCC
Confidence            588888886542               57788888888

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.29  E-value=0.13  Score=28.80  Aligned_cols=14  Identities=14%  Similarity=0.387  Sum_probs=7.1

Q ss_pred             eecCcCcccccChH
Q psy5202         214 YKCELCSYACAQSS  227 (343)
Q Consensus       214 ~~C~~C~~~f~~~~  227 (343)
                      +.|+.|+..|.-..
T Consensus         3 ~~CP~C~~~~~v~~   16 (38)
T TIGR02098         3 IQCPNCKTSFRVVD   16 (38)
T ss_pred             EECCCCCCEEEeCH
Confidence            34555555554443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.17  E-value=0.067  Score=43.58  Aligned_cols=45  Identities=16%  Similarity=0.348  Sum_probs=24.4

Q ss_pred             CceecCcCcccccChHHHHHHHHHhc-C-------CCCc-----ccccCCCCCCCCCh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHG-R-------LGKD-----VYRCRFCEMPFSVP  256 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~-~-------~~~~-----~~~C~~C~~~f~~~  256 (343)
                      +.+.||+|+..|....-+....+.-. .       .+..     +..|+.||++|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            44566666666665544444433211 0       0122     25799999987654

>KOG2807|consensus

Probab=89.98  E-value=0.65  Score=39.32  Aligned_cols=31  Identities=29%  Similarity=0.623  Sum_probs=21.6

Q ss_pred             CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE  250 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~  250 (343)
                      ..|+|..|...|-.--+...|...|.        |+.|.
T Consensus       344 ~~y~C~~Ck~~FCldCDv~iHesLh~--------CpgCe  374 (378)
T KOG2807|consen  344 GRYRCESCKNVFCLDCDVFIHESLHN--------CPGCE  374 (378)
T ss_pred             CcEEchhccceeeccchHHHHhhhhc--------CCCcC
Confidence            45778777777777777777766663        66665

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.96  E-value=0.18  Score=29.45  Aligned_cols=25  Identities=28%  Similarity=0.733  Sum_probs=12.0

Q ss_pred             CcccccCCCCCCCCCh----HHHHHHHhh
Q psy5202         241 KDVYRCRFCEMPFSVP----STLEKHMRK  265 (343)
Q Consensus       241 ~~~~~C~~C~~~f~~~----~~l~~H~~~  265 (343)
                      ....+|.+|++.+...    ..|.+|++.
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            3445666666655543    566666643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=89.19  E-value=0.064  Score=43.69  Aligned_cols=44  Identities=27%  Similarity=0.557  Sum_probs=30.0

Q ss_pred             CCcccccccccccCChHHHHHHHHhc---c-------CCC-----CeecCCCCccCCCH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNH---T-------GEK-----PFKCTVCDHACSQS  132 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h---~-------~~~-----~~~C~~C~~~f~~~  132 (343)
                      ++.+.|++|+..|.+..-.....+.-   .       +..     ...|+.||+.|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46789999999999876555444321   1       112     26899999987644

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=88.81  E-value=0.29  Score=27.07  Aligned_cols=14  Identities=14%  Similarity=0.406  Sum_probs=6.8

Q ss_pred             ecCcCcccccChHH
Q psy5202         215 KCELCSYACAQSSK  228 (343)
Q Consensus       215 ~C~~C~~~f~~~~~  228 (343)
                      .|+.|+..|.-...
T Consensus         4 ~Cp~C~~~y~i~d~   17 (36)
T PF13717_consen    4 TCPNCQAKYEIDDE   17 (36)
T ss_pred             ECCCCCCEEeCCHH
Confidence            45555555544433

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.74  E-value=0.28  Score=27.28  Aligned_cols=11  Identities=36%  Similarity=0.721  Sum_probs=5.4

Q ss_pred             ccccCCCCCCC
Q psy5202         243 VYRCRFCEMPF  253 (343)
Q Consensus       243 ~~~C~~C~~~f  253 (343)
                      ..+|+.|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            44555555444

>PHA00626 hypothetical protein

Probab=88.49  E-value=0.18  Score=30.36  Aligned_cols=14  Identities=36%  Similarity=0.429  Sum_probs=8.8

Q ss_pred             cccccCCCCCCCCC
Q psy5202         242 DVYRCRFCEMPFSV  255 (343)
Q Consensus       242 ~~~~C~~C~~~f~~  255 (343)
                      ..|.|+.||+.|+.
T Consensus        22 nrYkCkdCGY~ft~   35 (59)
T PHA00626         22 DDYVCCDCGYNDSK   35 (59)
T ss_pred             cceEcCCCCCeech
Confidence            45677777766643

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=87.92  E-value=0.54  Score=28.96  Aligned_cols=10  Identities=30%  Similarity=0.919  Sum_probs=6.2

Q ss_pred             cccccCCCCC
Q psy5202         242 DVYRCRFCEM  251 (343)
Q Consensus       242 ~~~~C~~C~~  251 (343)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4566666664

>KOG2186|consensus

Probab=87.47  E-value=0.39  Score=39.08  Aligned_cols=47  Identities=21%  Similarity=0.398  Sum_probs=37.9

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHH
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  234 (343)
                      .|.|..||....-. .+.+|+-..++ ..|.|--|++.|.. ..+..|..
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            48899999887654 46779888777 66999999999988 77888854

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=87.02  E-value=0.29  Score=28.78  Aligned_cols=11  Identities=36%  Similarity=0.920  Sum_probs=5.9

Q ss_pred             eecCcCccccc
Q psy5202         214 YKCELCSYACA  224 (343)
Q Consensus       214 ~~C~~C~~~f~  224 (343)
                      |+|+.||..|.
T Consensus         4 y~C~~CG~~~~   14 (46)
T PRK00398          4 YKCARCGREVE   14 (46)
T ss_pred             EECCCCCCEEE
Confidence            55555555544

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=86.95  E-value=0.73  Score=28.29  Aligned_cols=10  Identities=40%  Similarity=1.082  Sum_probs=5.8

Q ss_pred             cccccCCCCC
Q psy5202         242 DVYRCRFCEM  251 (343)
Q Consensus       242 ~~~~C~~C~~  251 (343)
                      .+|+|+.||.
T Consensus        49 ~~Y~Cp~CGF   58 (61)
T COG2888          49 NPYRCPKCGF   58 (61)
T ss_pred             CceECCCcCc
Confidence            4566666654

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.85  E-value=0.74  Score=23.29  Aligned_cols=21  Identities=19%  Similarity=0.618  Sum_probs=14.6

Q ss_pred             ccCCCCCCCCChHHHHHHHhhh
Q psy5202         245 RCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       245 ~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      .|++|++.+ ....+..|+..+
T Consensus         3 ~CPiC~~~v-~~~~in~HLD~C   23 (26)
T smart00734        3 QCPVCFREV-PENLINSHLDSC   23 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHHHh
Confidence            577888777 556777777644

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>KOG2186|consensus

Probab=86.76  E-value=0.44  Score=38.80  Aligned_cols=51  Identities=24%  Similarity=0.480  Sum_probs=42.1

Q ss_pred             ccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |.|..||..... ..+.+|+...++ .-|.|--|++.|.. ..+..|..-.+..
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITEa   54 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITEA   54 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcchH
Confidence            789999999874 557889988777 67999999999998 7888898765543

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=86.76  E-value=0.6  Score=39.16  Aligned_cols=55  Identities=25%  Similarity=0.464  Sum_probs=35.0

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE  250 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~  250 (343)
                      -.|-.|.-.|.....-..-  .-+....|+|+.|...|-.--+...|...|.        |..|.
T Consensus       363 ~~Cf~CQ~~fp~~~~~~~~--~~~ss~rY~Ce~CK~~FC~dCdvfiHe~Lh~--------C~gCe  417 (421)
T COG5151         363 THCFVCQGPFPKPPVSPFD--ESTSSGRYQCELCKSTFCSDCDVFIHETLHF--------CIGCE  417 (421)
T ss_pred             ccceeccCCCCCCCCCccc--ccccccceechhhhhhhhhhhHHHHHHHHhh--------CCCCc
Confidence            3477777777654221000  1122346899999999988888888877773        66665

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=86.51  E-value=0.59  Score=25.00  Aligned_cols=11  Identities=27%  Similarity=0.706  Sum_probs=5.8

Q ss_pred             eecCcCccccc
Q psy5202         214 YKCELCSYACA  224 (343)
Q Consensus       214 ~~C~~C~~~f~  224 (343)
                      |.|..|+..+.
T Consensus         1 Y~C~~Cg~~~~   11 (32)
T PF03604_consen    1 YICGECGAEVE   11 (32)
T ss_dssp             EBESSSSSSE-
T ss_pred             CCCCcCCCeeE
Confidence            45666665554

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=86.29  E-value=0.4  Score=28.37  Aligned_cols=11  Identities=27%  Similarity=0.773  Sum_probs=5.8

Q ss_pred             CcccccCcccc
Q psy5202         185 NDTCEFCGKVF  195 (343)
Q Consensus       185 ~~~C~~C~~~f  195 (343)
                      .|.|..||+.|
T Consensus         6 ~Y~C~~Cg~~~   16 (49)
T COG1996           6 EYKCARCGREV   16 (49)
T ss_pred             EEEhhhcCCee
Confidence            35555555555

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=86.27  E-value=0.68  Score=44.75  Aligned_cols=40  Identities=20%  Similarity=0.528  Sum_probs=28.7

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMP  252 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~  252 (343)
                      +.|+.|+..+.          .|......+|.+||+.                 ...|..|+.||-.
T Consensus       445 ~~Cp~Cd~~lt----------~H~~~~~L~CH~Cg~~-----------------~~~p~~Cp~Cgs~  484 (730)
T COG1198         445 AECPNCDSPLT----------LHKATGQLRCHYCGYQ-----------------EPIPQSCPECGSE  484 (730)
T ss_pred             ccCCCCCcceE----------EecCCCeeEeCCCCCC-----------------CCCCCCCCCCCCC
Confidence            56888876643          3555577899999932                 3578899999965

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.15  E-value=0.95  Score=34.89  Aligned_cols=34  Identities=12%  Similarity=0.231  Sum_probs=25.6

Q ss_pred             cCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCC
Q psy5202         209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPF  253 (343)
Q Consensus       209 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f  253 (343)
                      .+..-|.|+.|+..|+....+.           .-|.|+.||...
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~-----------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME-----------LNFTCPRCGAML  138 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH-----------cCCcCCCCCCEe
Confidence            3456688999999888887774           138899999653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=85.76  E-value=0.55  Score=33.98  Aligned_cols=35  Identities=14%  Similarity=0.238  Sum_probs=27.0

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKL  229 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  229 (343)
                      ....|+.||++|...           +..|..|++||..|.....+
T Consensus         8 tKr~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~~~~   42 (129)
T TIGR02300         8 TKRICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPEEAL   42 (129)
T ss_pred             ccccCCCcCcccccc-----------CCCCccCCCcCCccCcchhh
Confidence            457899999999653           45789999999998665333

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=85.39  E-value=0.4  Score=32.01  Aligned_cols=13  Identities=31%  Similarity=1.035  Sum_probs=6.9

Q ss_pred             cccccCCCCCCCC
Q psy5202         242 DVYRCRFCEMPFS  254 (343)
Q Consensus       242 ~~~~C~~C~~~f~  254 (343)
                      ..+.|..||..|.
T Consensus        52 GIW~C~kCg~~fA   64 (89)
T COG1997          52 GIWKCRKCGAKFA   64 (89)
T ss_pred             CeEEcCCCCCeec
Confidence            4455555555554

>smart00531 TFIIE Transcription initiation factor IIE

Probab=85.17  E-value=1.1  Score=34.07  Aligned_cols=38  Identities=16%  Similarity=0.300  Sum_probs=24.1

Q ss_pred             CCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCC
Q psy5202         210 GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPF  253 (343)
Q Consensus       210 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f  253 (343)
                      +...|.|+.|+..|.....+..    ..  ....|.|+.||...
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~----~d--~~~~f~Cp~Cg~~l  133 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL----LD--MDGTFTCPRCGEEL  133 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh----cC--CCCcEECCCCCCEE
Confidence            3456889999988886544432    01  12338899998754

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=85.12  E-value=0.16  Score=38.69  Aligned_cols=44  Identities=16%  Similarity=0.355  Sum_probs=24.4

Q ss_pred             ccccccccccCCh---HHHHHHHHhccCCCCeecCCCCccCCCHHHHHHH
Q psy5202          92 KECEFCGKKFKYE---NTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKH  138 (343)
Q Consensus        92 ~~C~~C~~~f~~~---~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  138 (343)
                      ++|++||..+...   ..+..  ..+ -.+.++|+.||+.|.+...+..-
T Consensus         1 m~cp~c~~~~~~~~~s~~~~~--~~~-~~~~~~c~~c~~~f~~~e~~~~~   47 (154)
T PRK00464          1 MRCPFCGHPDTRVIDSRPAED--GNA-IRRRRECLACGKRFTTFERVELV   47 (154)
T ss_pred             CcCCCCCCCCCEeEeccccCC--CCc-eeeeeeccccCCcceEeEeccCc
Confidence            4799999665211   11111  001 11238899999999876654433

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.83  E-value=0.54  Score=36.20  Aligned_cols=25  Identities=32%  Similarity=0.783  Sum_probs=20.6

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSY  221 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  221 (343)
                      +.|+|++||..+             -|+.|-+||+||-
T Consensus       133 ~~~vC~vCGy~~-------------~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGYTH-------------EGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCCcc-------------cCCCCCcCCCCCC
Confidence            379999999764             4578999999993

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.77  E-value=0.61  Score=27.10  Aligned_cols=27  Identities=19%  Similarity=0.508  Sum_probs=20.8

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCCCCcc
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHA  128 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~  128 (343)
                      .|.|..||..|...           ...+..|+.||..
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCceECCCCCce
Confidence            48999999988743           3456899999864

present in RNA polymerase I, II and III

>PRK04023 DNA polymerase II large subunit; Validated

Probab=84.58  E-value=1.1  Score=44.21  Aligned_cols=13  Identities=15%  Similarity=0.225  Sum_probs=8.6

Q ss_pred             ccccCCCCCCCCC
Q psy5202         243 VYRCRFCEMPFSV  255 (343)
Q Consensus       243 ~~~C~~C~~~f~~  255 (343)
                      ++.|+.||..-..
T Consensus       663 ~y~CPKCG~El~~  675 (1121)
T PRK04023        663 EDECEKCGREPTP  675 (1121)
T ss_pred             CCcCCCCCCCCCc
Confidence            4678888865443

>smart00614 ZnF_BED BED zinc finger

Probab=84.36  E-value=0.7  Score=27.73  Aligned_cols=21  Identities=33%  Similarity=0.863  Sum_probs=11.8

Q ss_pred             cccCCCCCCCCCh-----HHHHHHHh
Q psy5202         244 YRCRFCEMPFSVP-----STLEKHMR  264 (343)
Q Consensus       244 ~~C~~C~~~f~~~-----~~l~~H~~  264 (343)
                      -.|.+|++.+...     +.|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            4466666555443     45666665

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=84.14  E-value=0.18  Score=38.45  Aligned_cols=15  Identities=20%  Similarity=0.416  Sum_probs=8.0

Q ss_pred             cccCCCCCCCCChHH
Q psy5202         244 YRCRFCEMPFSVPST  258 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~  258 (343)
                      ++|+.||++|.+...
T Consensus        29 ~~c~~c~~~f~~~e~   43 (154)
T PRK00464         29 RECLACGKRFTTFER   43 (154)
T ss_pred             eeccccCCcceEeEe
Confidence            555555555555443

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=83.85  E-value=1.2  Score=35.09  Aligned_cols=35  Identities=14%  Similarity=0.329  Sum_probs=26.3

Q ss_pred             CCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCC
Q psy5202         210 GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSV  255 (343)
Q Consensus       210 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~  255 (343)
                      ...-|.|+.|+..|+....+.           .-|.|+.||.....
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~-----------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME-----------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh-----------cCCcCCCCCCCCee
Confidence            345699999999998887752           24899999976543

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=82.98  E-value=0.27  Score=29.79  Aligned_cols=29  Identities=21%  Similarity=0.627  Sum_probs=20.3

Q ss_pred             ccccccccccCChHHHHHHHHhccCCCCeecCCCCc
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDH  127 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~  127 (343)
                      |+|..|+..|.....+.       ......|+.|+.
T Consensus         6 y~C~~Cg~~fe~~~~~~-------~~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKMS-------DDPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEecC-------CCCCCCCCCCCC
Confidence            89999999997543221       134567999986

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF15269 zf-C2H2_7: Zinc-finger

Probab=82.40  E-value=1  Score=25.74  Aligned_cols=22  Identities=45%  Similarity=0.970  Sum_probs=16.7

Q ss_pred             eecCcCcccccChHHHHHHHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      |+|-.|..+..-++.|..||+.
T Consensus        21 ykcfqcpftc~~kshl~nhmky   42 (54)
T PF15269_consen   21 YKCFQCPFTCNEKSHLFNHMKY   42 (54)
T ss_pred             ceeecCCcccchHHHHHHHHHH
Confidence            6777777777777777777764

>smart00531 TFIIE Transcription initiation factor IIE

Probab=82.17  E-value=1.3  Score=33.67  Aligned_cols=38  Identities=18%  Similarity=0.449  Sum_probs=25.5

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHAC  129 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  129 (343)
                      ...-|.|+.|+..|.....+..   .. ....|.|+.||...
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~---~d-~~~~f~Cp~Cg~~l  133 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL---LD-MDGTFTCPRCGEEL  133 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh---cC-CCCcEECCCCCCEE
Confidence            3457999999999985443322   11 23449999999764

>KOG4167|consensus

Probab=81.62  E-value=3.8  Score=38.95  Aligned_cols=29  Identities=28%  Similarity=0.410  Sum_probs=24.8

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhcc
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      ....-|.|..|+++|....++..||++|.
T Consensus       788 ~~~giFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  788 DPTGIFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             CCCceeehHHHHHHHHHHhhhhHHHHHHH
Confidence            34567999999999999999999999984

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.42  E-value=0.75  Score=36.23  Aligned_cols=32  Identities=16%  Similarity=0.275  Sum_probs=26.2

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCccccc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACA  224 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  224 (343)
                      ..|.|+.|+..|..-..+.         .-|.|+.||....
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            6799999999998877653         3699999997654

>KOG4377|consensus

Probab=81.36  E-value=7.7  Score=34.29  Aligned_cols=27  Identities=22%  Similarity=0.533  Sum_probs=21.2

Q ss_pred             Ceec--CCCCccCCCHHHHHHHHHHhccC
Q psy5202         119 PFKC--TVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       119 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      .|.|  +.|++.+..+..+.+|.++|...
T Consensus       271 hyhcl~e~C~ykr~~k~DvirH~~~hkkr  299 (480)
T KOG4377|consen  271 HYHCLNEYCFYKRGQKNDVIRHVEIHKKR  299 (480)
T ss_pred             hhcccCccccccccchhhhHHHHHHHhhc
Confidence            3566  45998888899999999988643

>COG5188 PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification]

Probab=80.92  E-value=1.4  Score=37.72  Aligned_cols=23  Identities=22%  Similarity=0.446  Sum_probs=20.5

Q ss_pred             CCcccccCcccccCHHHHHHHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRR  206 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~  206 (343)
                      ..+-|..|++.|....-+..|+.
T Consensus       237 ~~~YC~~C~r~f~~~~VFe~Hl~  259 (470)
T COG5188         237 PKVYCVKCGREFSRSKVFEYHLE  259 (470)
T ss_pred             cceeeHhhhhHhhhhHHHHHHHh
Confidence            56889999999999999999975

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.88  E-value=0.34  Score=27.55  Aligned_cols=31  Identities=23%  Similarity=0.581  Sum_probs=21.3

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCCCCcc
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHA  128 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~  128 (343)
                      .|+|..||..|.......       ......|+.||..
T Consensus         5 ~y~C~~Cg~~fe~~~~~~-------~~~~~~CP~Cg~~   35 (41)
T smart00834        5 EYRCEDCGHTFEVLQKIS-------DDPLATCPECGGD   35 (41)
T ss_pred             EEEcCCCCCEEEEEEecC-------CCCCCCCCCCCCc
Confidence            389999999987443321       1355679999873

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.80  E-value=2.1  Score=32.96  Aligned_cols=20  Identities=10%  Similarity=0.100  Sum_probs=14.1

Q ss_pred             CCCeecCCCCccCCCHHHHH
Q psy5202         117 EKPFKCTVCDHACSQSAKLK  136 (343)
Q Consensus       117 ~~~~~C~~C~~~f~~~~~L~  136 (343)
                      ..-|.|+.|+..|.....+.
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~  126 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME  126 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH
Confidence            45578888888777766653

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	343
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-17
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-12
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-11
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-10
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-10
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-10
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		3e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-07
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-07
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		8e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		8e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		4e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		5e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		9e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		9e-05
2epr_A	48	Solution Structure Of The Secound Zinc Finger Domai		3e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 81/187 (43%), Gaps = 14/187 (7%)
Query: 79  SYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKH 138
           S A +     EK   C  CGK F   + L  H+R HTGEKP+KC  C  + S    L +H
Sbjct: 9   SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH 68
Query: 139 MKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLPNSHMKKES-RRNDTCEFCGKVFKN 197
            + H            P              NL    +H +  +  +   C  CGK F  
Sbjct: 69  QRTH--------TGEKPYKCPECGKSFSQRANL---RAHQRTHTGEKPYACPECGKSFSQ 117
Query: 198 CSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS 257
            ++L  H+R+HTGEKPYKC  C  + ++   L  H +TH   G+  Y+C  C   FS   
Sbjct: 118 LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH--TGEKPYKCPECGKSFSRRD 175
Query: 258 TLEKHMR 264
            L  H R
Sbjct: 176 ALNVHQR 182

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           C  CGK F   SNL  H+R+HTGEKPYKC  C  + +QSS L +H +TH   G+  Y+C 
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTH--TGEKPYKCP 64
Query: 248 FCEMPFSVPSTLEKHMRKCVVNQNMK 273
            C   FS    L +H R    +QN K
Sbjct: 65  ECGKSFSRSDHLSRHQR---THQNKK 87

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 38/119 (31%)
Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHXXXXXXXXXX 152
           +CE CGK F  ++ L+ H R HTG KP+KC  CD+A + S+ L KH++IH          
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH---------- 59
Query: 153 XXPXXXXXXXXXXXXXXNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGE 211
                                          R   C+ C    +N S LTVH RSHTG+
Sbjct: 60  ----------------------------SDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           CE CGK F     L  H R HTG KPYKC+ C YA A SS L +H++ H    +  ++C+
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD--ERPFKCQ 68
Query: 248 FCEMPFSVPSTLEKHMR 264
            C       S L  H+R
Sbjct: 69  ICPYASRNSSQLTVHLR 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH-GRLGKDVYR 245
            CE CGK+F++  +L  H+ SH+GEKPY C +C     +  +++ H+++H G +GK  Y 
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YI 67
Query: 246 CRFCEMPFSVPSTLEKHMRK 265
           C+ C   FS P  L  H+++
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQ 87

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 181 ESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTH 236
           E RR   C++  C KV+   S+L  H R+HTGEKPYKC  E C +  A+S +LTRH + H
Sbjct: 11  EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70
Query: 237 GRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
              G   ++C  C   FS    L  HM++
Sbjct: 71  --TGAKPFQCGVCNRSFSRSDHLALHMKR 97

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C +CGK F++   L +H R+HTGEKPYKCE C YA AQ + L  H++ H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 187 TCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKD 242
           TC++  CGK +   S+L  H R+HTGEKPY C+   C +  A+S +LTRH + H   G  
Sbjct: 8   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH--TGHR 65
Query: 243 VYRCRFCEMPFSVPSTLEKHMRK 265
            ++C+ C+  FS    L  HM++
Sbjct: 66  PFQCQKCDRAFSRSDHLALHMKR 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 187 TCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKD 242
           TC++  CGK +   S+L  H R+HTGEKPY C+   C +  A+S +LTRH + H   G  
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH--TGHR 64
Query: 243 VYRCRFCEMPFSVPSTLEKHMRK 265
            ++C+ C+  FS    L  HM++
Sbjct: 65  PFQCQKCDRAFSRSDHLALHMKR 87

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 178 MKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            ++  RR   C+ CGK F + S+L+ HRR+HTGEKPYKC+ C  A  Q S L  H + H
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F + SNLT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 53/141 (37%), Gaps = 35/141 (24%)
Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHXXXXXXXXXX 152
           EC  C KKF  +  L+ H R HTGEKPF+C  C     +   L +H              
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-------------- 54
Query: 153 XXPXXXXXXXXXXXXXXNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEK 212
                              C+        S +  TC  C + F+    L +H  SHTGE 
Sbjct: 55  ---------------EARNCM------NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM 93
Query: 213 PYKCELCSYACAQSSKLTRHM 233
           PYKC  CS    Q   L  HM
Sbjct: 94  PYKCSSCSQQFMQKKDLQSHM 114

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 188 CEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
           C F  CGK+F    NL +H+R+HTGEKP+KCE   C    A SS   +HM  H
Sbjct: 93  CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   S+SA+L +H++IH                                
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHT------------------------------- 30
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 31  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 235 THGR 238
            H R
Sbjct: 84  IHLR 87

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F   + LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           EK   C  CGK F   + L  H+R HTGEKP+KC  C  A SQ++ L  H +IH
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C  CGK F   S L  H+R HTGEKPYKC  C  A +Q+S L  H + H
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   SQS  L +H++IH                                
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHT------------------------------- 30
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 31  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 235 THGR 238
            H R
Sbjct: 84  IHLR 87

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F    +LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   S+SA L +H++IH                                
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHT------------------------------- 30
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 31  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 235 THGR 238
            H R
Sbjct: 84  IHLR 87

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F   ++LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 42/144 (29%)
Query: 97  CGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXX 154
           C K++   + LQ H R HTGEKP++C    C+   S+S +LK+H + H            
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ----- 68
Query: 155 PXXXXXXXXXXXXXXNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
                                            C+ C + F    +L  H R+HTGEKP+
Sbjct: 69  ---------------------------------CKTCQRKFSRSDHLKTHTRTHTGEKPF 95
Query: 215 KCEL--CSYACAQSSKLTRHMKTH 236
            C    C    A+S +L RH   H
Sbjct: 96  SCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 191 CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           C K +   S+L +H R HTGEKPY+C+   C    ++S +L RH + H   G   ++C+ 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH--TGVKPFQCKT 71
Query: 249 CEMPFSVPSTLEKHMR 264
           C+  FS    L+ H R
Sbjct: 72  CQRKFSRSDHLKTHTR 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F   +NL  H R HTG+KP++C +C    +Q + L +H++TH   G+  + C  
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKHMR 264
           C   F+   T ++H +
Sbjct: 68  CGRKFATLHTRDRHTK 83

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 181 ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLG 240
           ++++   C+FCG+ F    NL +H R+HT E+PY C++C  A  +   L  H   H +  
Sbjct: 13  KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK-- 70
Query: 241 KDVYRCRFCEMPFSVPSTLEKH 262
           +  ++C+ C   F    TL  H
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVH 92

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +K  +C+ C   F+Y+  L +H+  HTGEKP++C +C    ++ A LK H +IH
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C+ C   F+   NL  H+  HTGEKPY+C +C     + + L  H + H
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   S+S +L +H++IH                                
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHT------------------------------- 30
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 31  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 235 THGR 238
            H R
Sbjct: 84  IHLR 87

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F     LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F   +NL  H R HTG+KP++C +C    +Q + L  H++TH   G+  + C  
Sbjct: 10  ESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKHMR 264
           C   F+   T  +H +
Sbjct: 68  CGRKFATLHTRTRHTK 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   S+S +L +H++IH                                
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHT------------------------------- 29
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 30  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 82
Query: 235 THGR 238
            H R
Sbjct: 83  IHLR 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F     LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 9   ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 66
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 67  CGRKFARSDERKRH 80

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           C+ CGK FK  S L+ H   H+  +PY C+ C     Q S + +H   H   G+  ++C+
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH--TGEKPHKCQ 61
Query: 248 FCEMPFSVPSTLEKHMRK 265
            C   FS  S L  H RK
Sbjct: 62  VCGKAFSQSSNLITHSRK 79

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 40/124 (32%)
Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHXXXXXXXXXXXXPXXXXXXXXXXXXXXNLCLP 174
           E+P+ C V  CD   S+S +L +H++IH                                
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHT------------------------------- 30
Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                   ++   C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 31  -------GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 235 THGR 238
            H R
Sbjct: 84  IHLR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF 248
           E C + F     LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  
Sbjct: 10  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDI 67
Query: 249 CEMPFSVPSTLEKH 262
           C   F+     ++H
Sbjct: 68  CGRKFARSDERKRH 81

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           S R   C FCGK +++ S L+ HRR+H G +P  C  C       S++ RH+K H
Sbjct: 1   SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 177 HMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           H+     R   C  CGK F   S L  H+  HTGEKP++C      C +   L  +++TH
Sbjct: 26  HLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF--EGCGKRFSLDFNLRTH 83
Query: 237 GRL--GKDVYRCRF--CEMPFSVPSTLEKHM 263
            R+  G   Y C F  C   F+  + L+ H+
Sbjct: 84  VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHM-KTHGRLGKDV 243
           T E C K +    NL  H RSHTGEKPY C  E CS A + +S   +H  +TH      V
Sbjct: 71  TFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYV 130
Query: 244 YRCRFCEMPFSVPSTLEKHMR 264
            +   C   ++ PS+L KH++
Sbjct: 131 CKLPGCTKRYTDPSSLRKHVK 151

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH 232
           C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 191 CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
           CGK +   S+L  H R+HTGEKP+ C    C    A+S +L+RH +TH
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           E C + F     LT H R HTG+KP++C +C    ++S  LT H++TH
Sbjct: 25  ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 58/156 (37%), Gaps = 22/156 (14%)
Query: 94  CEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHXXXXXXX 149
           C F  CG  +     LQAH   HTGEKPF C    C+   +    L +H   H       
Sbjct: 15  CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 74
Query: 150 XXXXXPXXXXXXXXXXXXXXN------LCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTV 203
                               N      +C+   H           E CGK FK  + L V
Sbjct: 75  CDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHF----------ENCGKAFKKHNQLKV 124
Query: 204 HRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHG 237
           H+ SHT + PY+C  E C    +  S+L RH K H 
Sbjct: 125 HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM-KTH-GRLGK 241
            CE C + F    +L  H RSHT EKPY C LC+ A  +   L RH  K H G LG+
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60

>pdb|2EPR|A Chain A, Solution Structure Of The Secound Zinc Finger Domain Of Zinc Finger Protein 278 Length = 48

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 181 ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
            +R+   CE CGK+F++  +L  H+ SH+GEKPY
Sbjct: 8   RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 41

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	343
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-28
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-32
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-29
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-27
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-24
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-21
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-27
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-26
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-23
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-22
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-13
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-18
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-15
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-12
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-11
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	8e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	7e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	4e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	4e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	7e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	3e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	5e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  121 bits (307), Expect = 1e-33
 Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 40/176 (22%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK   C  CGK F   + L  H+R HTGEKP+KC  C  + S    L +H + H   G+K
Sbjct: 19  EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHT--GEK 76

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C  CGK F   +NL  H+R+H
Sbjct: 77  ------PY------------------------------KCPECGKSFSQRANLRAHQRTH 100

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           TGEKPY C  C  + +Q + L  H +TH   G+  Y+C  C   FS    L  H R
Sbjct: 101 TGEKPYACPECGKSFSQLAHLRAHQRTH--TGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  121 bits (305), Expect = 3e-33
 Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 40/176 (22%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  +C  CGK F  +  L  H+R HTGEKP+KC  C  + SQ A L+ H + H   G+K
Sbjct: 47  EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHT--GEK 104

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C  CGK F   ++L  H+R+H
Sbjct: 105 ------PY------------------------------ACPECGKSFSQLAHLRAHQRTH 128

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           TGEKPYKC  C  + ++   L  H +TH   G+  Y+C  C   FS    L  H R
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTHQRTH--TGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  111 bits (281), Expect = 7e-30
 Identities = 51/148 (34%), Positives = 65/148 (43%), Gaps = 38/148 (25%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK  +C  CGK F     L+AH+R HTGEKP+ C  C  + SQ A L+ H + H   G+K
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--GEK 132

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C  CGK F    NL  H+R+H
Sbjct: 133 ------PY------------------------------KCPECGKSFSREDNLHTHQRTH 156

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMKTH 236
           TGEKPYKC  C  + ++   L  H +TH
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  107 bits (271), Expect = 2e-28
 Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 40/164 (24%)

Query: 101 FKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSL 160
               ++  A      GEKP+ C  C  + S+S  L +H + H   G+K      P     
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHT--GEK------PY---- 50

Query: 161 AAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCS 220
                                      C  CGK F +  +LT H+R+HTGEKPYKC  C 
Sbjct: 51  --------------------------KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECG 84

Query: 221 YACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
            + +Q + L  H +TH   G+  Y C  C   FS  + L  H R
Sbjct: 85  KSFSQRANLRAHQRTH--TGEKPYACPECGKSFSQLAHLRAHQR 126

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.1 bits (217), Expect = 1e-20
 Identities = 40/125 (32%), Positives = 50/125 (40%), Gaps = 38/125 (30%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           EK   C  CGK F     L+AH+R HTGEKP+KC  C  + S+   L  H + H   G+K
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH--TGEK 160

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C  CGK F     L VH+R+H
Sbjct: 161 ------PY------------------------------KCPECGKSFSRRDALNVHQRTH 184

Query: 209 TGEKP 213
           TG+K 
Sbjct: 185 TGKKT 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  118 bits (298), Expect = 2e-32
 Identities = 51/184 (27%), Positives = 65/184 (35%), Gaps = 42/184 (22%)

Query: 89  EKNKECE--FCGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHDE 144
           EK   C+   C K F   + L  H   HTGEK F C    CD   +  A +KKH      
Sbjct: 40  EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH- 98

Query: 145 DGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH 204
              K                       C                E CGK FK  + L VH
Sbjct: 99  -NIKICVYV------------------C--------------HFENCGKAFKKHNQLKVH 125

Query: 205 RRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKH 262
           + SHT + PY+C  E C    +  S+L RH K H   G    +   C       +   KH
Sbjct: 126 QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH--AGYPCKKDDSCSFVGKTWTLYLKH 183

Query: 263 MRKC 266
           + +C
Sbjct: 184 VAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  108 bits (271), Expect = 2e-28
 Identities = 47/188 (25%), Positives = 65/188 (34%), Gaps = 52/188 (27%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHDE 144
            K   C F  CG  +     LQAH   HTGEKPF C    C+   +    L +H   H  
Sbjct: 10  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH-- 67

Query: 145 DGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCE--FCGKVFKNCSNLT 202
            G+K                                    N TC+   C   F   +N+ 
Sbjct: 68  TGEK------------------------------------NFTCDSDGCDLRFTTKANMK 91

Query: 203 VHRRSHTGEK--PYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRC--RFCEMPFSVP 256
            H       K   Y C    C  A  + ++L  H  +H    +  Y C    C+  FS+P
Sbjct: 92  KHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH--TQQLPYECPHEGCDKRFSLP 149

Query: 257 STLEKHMR 264
           S L++H +
Sbjct: 150 SRLKRHEK 157

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 98.8 bits (247), Expect = 5e-25
 Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 46/164 (28%)

Query: 109 AHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDK--EDREEGPSASSLAAAA 164
             +      K + C+   C  A +++ KL+ H+  H   G+K    +EEG          
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHT--GEKPFPCKEEG---------- 49

Query: 165 AAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE--LCSYA 222
                                     C K F +  +LT H  +HTGEK + C+   C   
Sbjct: 50  --------------------------CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR 83

Query: 223 CAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMR 264
               + + +H      +   VY C F  C   F   + L+ H  
Sbjct: 84  FTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 45/128 (35%)

Query: 89  EKNK--ECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIH 142
            K     C F  CGK FK  N L+ H+ +HT + P++C    CD   S  ++LK+H K+H
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 143 DEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLT 202
              G    +                                     + C  V K  +   
Sbjct: 160 --AGYPCKK------------------------------------DDSCSFVGKTWTLYL 181

Query: 203 VH-RRSHT 209
            H    H 
Sbjct: 182 KHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 89  EKNKEC--EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK-IHDE 144
           +   EC  E C K+F   + L+ H + H G    K   C           KH+   H +
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  116 bits (292), Expect = 7e-32
 Identities = 49/191 (25%), Positives = 69/191 (36%), Gaps = 55/191 (28%)

Query: 89  EKNKECEFCGKKFKYENTLQAH---RRNHTGEKPFKCTVCDHAC-----SQSAKLKKHMK 140
           E +   + C ++F  +  L  H      H   K F C     +           L  HM+
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 141 IHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNC 198
            H   G+K                         P+            C F  C K +   
Sbjct: 61  RHT--GEK-------------------------PH-----------KCTFEGCRKSYSRL 82

Query: 199 SNLTVHRRSHTGEKPYKCE--LCSYACAQSSKLTRHMK-THGRLGKDVYRCRF--CEMPF 253
            NL  H RSHTGEKPY CE   CS A + +S   +H   TH    +  Y C+   C   +
Sbjct: 83  ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH--SNEKPYVCKLPGCTKRY 140

Query: 254 SVPSTLEKHMR 264
           + PS+L KH++
Sbjct: 141 TDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  100 bits (251), Expect = 5e-26
 Identities = 48/160 (30%), Positives = 63/160 (39%), Gaps = 50/160 (31%)

Query: 89  EKNKECEFCG-----KKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKI 141
            K   C + G     + FK +  L  H R HTGEKP KCT   C  + S+   LK H++ 
Sbjct: 32  RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

Query: 142 HDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCS 199
           H   G+K                         P             CE   C K F N S
Sbjct: 92  HT--GEK-------------------------PY-----------MCEHEGCSKAFSNAS 113

Query: 200 NLTVH-RRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
           +   H  R+H+ EKPY C+L  C+      S L +H+KT 
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 45/129 (34%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMK-IHD 143
           EK  +C F  C K +     L+ H R+HTGEKP+ C    C  A S ++   KH    H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH- 123

Query: 144 EDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNL 201
              +K      P                                C+   C K + + S+L
Sbjct: 124 -SNEK------PY------------------------------VCKLPGCTKRYTDPSSL 146

Query: 202 TVHRRSHTG 210
             H ++  G
Sbjct: 147 RKHVKTVHG 155

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  111 bits (279), Expect = 2e-30
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 44/154 (28%)

Query: 89  EKNKECE--FCGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDE 144
           ++   C    C K++   + LQ H R HTGEKP++C    C+   S+S +LK+H + H  
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT- 62

Query: 145 DGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH 204
            G K                         P             C+ C + F    +L  H
Sbjct: 63  -GVK-------------------------PF-----------QCKTCQRKFSRSDHLKTH 85

Query: 205 RRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
            R+HTGEKP+ C    C    A+S +L RH   H
Sbjct: 86  TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 99.5 bits (249), Expect = 5e-26
 Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 46/156 (29%)

Query: 115 TGEKPFKCT--VCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLC 172
           + ++PF C    C+    + + L+ H + H   G+K                        
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT--GEK------------------------ 35

Query: 173 LPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLT 230
            P             C+F  C + F     L  H+R HTG KP++C+ C    ++S  L 
Sbjct: 36  -P-----------YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83

Query: 231 RHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMR 264
            H +TH   G+  + CR+  C+  F+    L +H  
Sbjct: 84  THTRTH--TGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  108 bits (273), Expect = 4e-29
 Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 35/172 (20%)

Query: 97  CGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPS 156
            G   +      + +     +       CD   S   +L  H+ +        ++     
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH--VGGPEQNN--- 57

Query: 157 ASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
                                        + C   GK FK    L  H R HTGEKP+ C
Sbjct: 58  ------------------------HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93

Query: 217 --ELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMR 264
               C    A+S  L  H +TH   G+  ++C F  C+  F+  S  +KHM 
Sbjct: 94  PFPGCGKIFARSENLKIHKRTH--TGEKPFKCEFEGCDRRFANSSDRKKHMH 143

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  104 bits (262), Expect = 1e-27
 Identities = 39/161 (24%), Positives = 57/161 (35%), Gaps = 51/161 (31%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFK---------CTVCDHACSQSAKLKKHM 139
           + ++  + C + F   + L  H        P +         C     +     KL  H+
Sbjct: 23  QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 140 KIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKN 197
           ++H   G+K                         P             C F  CGK+F  
Sbjct: 83  RVHT--GEK-------------------------PF-----------PCPFPGCGKIFAR 104

Query: 198 CSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
             NL +H+R+HTGEKP+KCE   C    A SS   +HM  H
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 85.8 bits (213), Expect = 2e-20
 Identities = 37/137 (27%), Positives = 47/137 (34%), Gaps = 42/137 (30%)

Query: 84  TTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKI 141
             +     +EC   GK FK +  L  H R HTGEKPF C    C    ++S  LK H + 
Sbjct: 55  QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114

Query: 142 HDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCS 199
           H   G+K      P                                CEF  C + F N S
Sbjct: 115 H--TGEK------PF------------------------------KCEFEGCDRRFANSS 136

Query: 200 NLTVHRRSHTGEKPYKC 216
           +   H   HT +K    
Sbjct: 137 DRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CEF  C ++F   +  + H   HT +K    +
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  104 bits (263), Expect = 4e-28
 Identities = 45/152 (29%), Positives = 55/152 (36%), Gaps = 42/152 (27%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK---IHDED 145
               EC  C KKF  +  L+ H R HTGEKPF+C  C     +   L +H     ++   
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN--- 61

Query: 146 GDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHR 205
                R E                                 TC  C + F+    L +H 
Sbjct: 62  -----RSEQVF------------------------------TCSVCQETFRRRMELRLHM 86

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHM-KTH 236
            SHTGE PYKC  CS    Q   L  HM K H
Sbjct: 87  VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 94.1 bits (235), Expect = 6e-24
 Identities = 33/155 (21%), Positives = 48/155 (30%), Gaps = 43/155 (27%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCL 173
            +G    +C  C         LK H + H   G+K      P                  
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHT--GEK------PF----------------- 36

Query: 174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRS---HTGEKPYKCELCSYACAQSSKLT 230
                         C  CGK +    NL  H      +  E+ + C +C     +  +L 
Sbjct: 37  -------------ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR 83

Query: 231 RHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
            HM +H   G+  Y+C  C   F     L+ HM K
Sbjct: 84  LHMVSH--TGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.8 bits (185), Expect = 6e-17
 Identities = 27/128 (21%), Positives = 40/128 (31%), Gaps = 42/128 (32%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRN---HTGEKPFKCTVCDHACSQSAKLKKHMKIHDED 145
           EK  EC  CGK +  +  L  H      +  E+ F C+VC     +  +L+ HM  H   
Sbjct: 33  EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH--T 90

Query: 146 GDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH- 204
           G+       P                                C  C + F    +L  H 
Sbjct: 91  GEM------PY------------------------------KCSSCSQQFMQKKDLQSHM 114

Query: 205 RRSHTGEK 212
            + H+G  
Sbjct: 115 IKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCV 267
            +G    +C  C         L  H + H   G+  + C  C   +     L +H  +  
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKH--TGEKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 268 V 268
           +
Sbjct: 60  M 60

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  103 bits (260), Expect = 1e-27
 Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 41/153 (26%)

Query: 88  EEKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED 145
           E +   C    C K F+  + ++ H   H G +   C  C  A  +S+KLK+H  +H   
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT-- 58

Query: 146 GDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHR 205
           G+K                         P     +          CGK F    NL  H 
Sbjct: 59  GEK-------------------------PFQCTFEG---------CGKRFSLDFNLRTHV 84

Query: 206 RSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH 236
           R HTG++PY C    C+   AQS+ L  H+ TH
Sbjct: 85  RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 89.9 bits (224), Expect = 2e-22
 Identities = 33/154 (21%), Positives = 49/154 (31%), Gaps = 47/154 (30%)

Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLP 174
            +   C    C      ++ ++KH+  H                                
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGP------------------------------ 32

Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRH 232
                    R   C  CGK F   S L  H+  HTGEKP++C    C    +    L  H
Sbjct: 33  ---------RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

Query: 233 MKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMR 264
           ++ H   G   Y C F  C   F+  + L+ H+ 
Sbjct: 84  VRIH--TGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 86.0 bits (214), Expect = 6e-21
 Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 38/129 (29%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDG 146
            +   C  CGK F   + L+ H+  HTGEKPF+CT   C    S    L+ H++IH   G
Sbjct: 32  PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH--TG 89

Query: 147 DKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRR 206
           D+                         P                C K F   +NL  H  
Sbjct: 90  DR-------------------------PYVCPFDG---------CNKKFAQSTNLKSHIL 115

Query: 207 SHTGEKPYK 215
           +H   K  +
Sbjct: 116 THAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 77.9 bits (193), Expect = 5e-18
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 13/94 (13%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC 246
             + C K+F++ S +  H  +H G + + C  C  A  +SSKL RH   H   G+  ++C
Sbjct: 9   PHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH--TGEKPFQC 65

Query: 247 RF--CEMPFSVPSTLEKHMR--------KCVVNQ 270
            F  C   FS+   L  H+R         C  + 
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  102 bits (257), Expect = 2e-27
 Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 38/128 (29%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
               +CE CGK F  ++ L+ H R HTG KP+KC  CD+A + S+ L KH++IH    ++
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--SDER 63

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C+ C    +N S LTVH RSH
Sbjct: 64  ------PF------------------------------KCQICPYASRNSSQLTVHLRSH 87

Query: 209 TGEKPYKC 216
           TG+     
Sbjct: 88  TGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  100 bits (252), Expect = 1e-26
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 38/123 (30%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCL 173
                P KC VC    S+  KLK HM+ H   G K      P                  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT--GVK------PY----------------- 37

Query: 174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
                         C+ C     + S+L  H R H+ E+P+KC++C YA   SS+LT H+
Sbjct: 38  -------------KCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL 84

Query: 234 KTH 236
           ++H
Sbjct: 85  RSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 91.7 bits (229), Expect = 2e-23
 Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           CE CGK F     L  H R HTG KPYKC+ C YA A SS L +H++ H    +  ++C+
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--SDERPFKCQ 68

Query: 248 FCEMPFSVPSTLEKHMR 264
            C       S L  H+R
Sbjct: 69  ICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           S     P+KCE+C    ++  KL  HM+ H   G   Y+C+ C+   +  S+L KH+R
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH--TGVKPYKCKTCDYAAADSSSLNKHLR 57

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  102 bits (256), Expect = 3e-27
 Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 38/131 (29%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA 165
                R     +K F C  C    ++S  L  H + H    ++      P          
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHT--DER------PY--------- 46

Query: 166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQ 225
                                TC+ C K F+   +L  HR  H+ EKP+KC+ C     Q
Sbjct: 47  ---------------------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ 85

Query: 226 SSKLTRHMKTH 236
           S  L  H   H
Sbjct: 86  SRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 99.0 bits (248), Expect = 5e-26
 Identities = 31/128 (24%), Positives = 42/128 (32%), Gaps = 38/128 (29%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           +K   C+FCG+ F     L  H R HT E+P+ C +C  A  +   L+ H  IH    +K
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH--SKEK 72

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C+ CGK F     L VH+  H
Sbjct: 73  ------PF------------------------------KCQECGKGFCQSRTLAVHKTLH 96

Query: 209 TGEKPYKC 216
                   
Sbjct: 97  MQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.1 bits (217), Expect = 1e-21
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           C+FCG+ F    NL +H R+HT E+PY C++C  A  +   L  H   H    +  ++C+
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH--SKEKPFKCQ 77

Query: 248 FCEMPFSVPSTLEKHMR 264
            C   F    TL  H  
Sbjct: 78  ECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 71.7 bits (177), Expect = 6e-16
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPST 258
           S  +  R     +K + C+ C     +S  L  H +TH    +  Y C  C   F     
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH--TDERPYTCDICHKAFRRQDH 60

Query: 259 LEKHMR 264
           L  H  
Sbjct: 61  LRDHRY 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ CGK F    TL  H+  H         
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 97.1 bits (243), Expect = 3e-25
 Identities = 31/142 (21%), Positives = 44/142 (30%), Gaps = 41/142 (28%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
           +K   C+ CGK F +++    H   H G +P+ C VC         L  HMKIH   G K
Sbjct: 8   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH--TGIK 64

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                 P                                C  C K F    +   HR   
Sbjct: 65  ------PY------------------------------ECNICAKRFMWRDSF--HRHVT 86

Query: 209 TGEKPYKCELCSYACAQSSKLT 230
           +  K Y+         ++S  +
Sbjct: 87  SCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 86.7 bits (216), Expect = 2e-21
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 43/148 (29%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNL 171
              +G+K + C  C  + +  ++  +HM +H   G +      P                
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHL--GLR------PY--------------- 38

Query: 172 CLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTR 231
                           C  CGK FK   +L  H + HTG KPY+C +C+          R
Sbjct: 39  ---------------GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR 83

Query: 232 HMKTHGRLGKDVYRCRFCEMPFSVPSTL 259
           H+ +        Y     E   +  S  
Sbjct: 84  HVTS----CTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 77.9 bits (193), Expect = 4e-18
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           C+ CGK F + S    H   H G +PY C +C         L  HMK H   G   Y C 
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH--TGIKPYECN 69

Query: 248 FCEMPFSVPSTLEKHM 263
            C   F    +  +H+
Sbjct: 70  ICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 61.3 bits (150), Expect = 4e-12
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
              +G+K Y C+ C  +    S+  RHM  H  LG   Y C  C   F +   L  HM+
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMH--LGLRPYGCGVCGKKFKMKHHLVGHMK 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 91.4 bits (228), Expect = 3e-23
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH-GRLGKDVYR 245
            CE CGK+F++  +L  H+ SH+GEKPY C +C     +  +++ H+++H G +GK  Y 
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YI 67

Query: 246 CRFCEMPFSVPSTLEKHMRK 265
           C+ C   FS P  L  H+++
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 87.9 bits (219), Expect = 5e-22
 Identities = 28/126 (22%), Positives = 39/126 (30%), Gaps = 41/126 (32%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCL 173
            +G     C +C         L +H   H   G+K      P                  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSH--SGEK------PY----------------- 36

Query: 174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGE--KPYKCELCSYACAQSSKLTR 231
                        +C  CG  FK    ++ H RSH G   KPY C+ C    ++   L  
Sbjct: 37  -------------SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG 83

Query: 232 HMK-TH 236
           H+K  H
Sbjct: 84  HIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 86.4 bits (215), Expect = 2e-21
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 37/125 (29%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
                CE CGK F+    L  H+ +H+GEKP+ C VC     +  ++  H++ HD    K
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 149 EDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH-RRS 207
                 P                                C+ CGK F    +L  H ++ 
Sbjct: 65  ------PY------------------------------ICQSCGKGFSRPDHLNGHIKQV 88

Query: 208 HTGEK 212
           H+G  
Sbjct: 89  HSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.7 bits (151), Expect = 2e-12
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
            +G     CE+C         L RH  +H   G+  Y C  C + F     +  H+R
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSH--SGEKPYSCPVCGLRFKRKDRMSYHVR 56

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 90.6 bits (226), Expect = 4e-23
 Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 40/122 (32%)

Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLP 174
           E+P+ C V  CD   SQS  L +H++IH   G K                         P
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHT--GQK-------------------------P 34

Query: 175 NSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK 234
                        C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH K
Sbjct: 35  F-----------QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

Query: 235 TH 236
            H
Sbjct: 84  IH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 87.5 bits (218), Expect = 5e-22
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 191 CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE 250
           C + F    +LT H R HTG+KP++C +C    ++S  LT H++TH   G+  + C  C 
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDICG 69

Query: 251 MPFSVPSTLEKHMR 264
             F+     ++H +
Sbjct: 70  RKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 82.9 bits (206), Expect = 4e-20
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 40/126 (31%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDG 146
           E+   C    C ++F    +L  H R HTG+KPF+C +C    S+S  L  H++ H   G
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH--TG 59

Query: 147 DKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRR 206
           +K      P                                C+ CG+ F        H +
Sbjct: 60  EK------PF------------------------------ACDICGRKFARSDERKRHTK 83

Query: 207 SHTGEK 212
            H  +K
Sbjct: 84  IHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 211 EKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           E+PY C +  C    +QS  LTRH++ H   G+  ++CR C   FS    L  H+R
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIH--TGQKPFQCRICMRNFSRSDHLTTHIR 55

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 88.1 bits (219), Expect = 4e-22
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHGRLGKDVY 244
             E CGK FK  + L VH+ SHT + PY+C  E C    +  S+L RH K H   G    
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH--AGYPCK 62

Query: 245 RCRFCEMPFSVPSTLEKHMRKC 266
           +   C       +   KH+ +C
Sbjct: 63  KDDSCSFVGKTWTLYLKHVAEC 84

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 63.4 bits (155), Expect = 4e-13
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 93  ECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIH 142
            C F  CGK FK  N L+ H+ +HT + P++C    CD   S  ++LK+H K+H
Sbjct: 3   VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK-TH 236
           E C K F   S L  H + H G    K + CS+     +   +H+   H
Sbjct: 37  EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.8 bits (130), Expect = 8e-10
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 89  EKNKEC--EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK 140
           +   EC  E C K+F   + L+ H + H G    K   C           KH+ 
Sbjct: 29  QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 86.8 bits (216), Expect = 1e-21
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC 246
            C  C + F    +LT H R+HTGEKP+ C++C    A+S +  RH              
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILP-ILE 61

Query: 247 RFCEMPFSVPSTLEKHMR 264
              E   S    LE  + 
Sbjct: 62  DKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 79.5 bits (197), Expect = 5e-19
 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 42/123 (34%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDRE 152
           +C  C + F   + L  H R HTGEKPF C +C    ++S + K+H  I           
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-------- 56

Query: 153 EGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHR---RSHT 209
                                               +   ++     +L       +   
Sbjct: 57  -------------------------------LPILEDKVEELLSKNYHLENEVARLKKLV 85

Query: 210 GEK 212
           GE+
Sbjct: 86  GER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 73.7 bits (182), Expect = 7e-17
 Identities = 22/122 (18%), Positives = 35/122 (28%), Gaps = 42/122 (34%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSH 177
           KPF+C +C    S+S  L  H++ H   G+K      P                      
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH--TGEK------PF--------------------- 32

Query: 178 MKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH---MK 234
                     C+ CG+ F        HR       P   +      +++  L      +K
Sbjct: 33  ---------ACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLK 82

Query: 235 TH 236
             
Sbjct: 83  KL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKH---MKIH 142
           EK   C+ CG+KF   +  + HR       P      +   S++  L+     +K  
Sbjct: 29  EKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           KP++C +C    ++S  LT H++TH   G+  + C  C   F+     ++H  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH--TGEKPFACDICGRKFARSDERKRHRD 52

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 85.8 bits (213), Expect = 3e-21
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 183 RRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHGR 238
           RR   C++  C KV+   S+L  H R+HTGEKPYKC  E C +  A+S +LTRH + H  
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH-- 70

Query: 239 LGKDVYRCRFCEMPFSVPSTLEKHMR 264
            G   ++C  C   FS    L  HM+
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 77.7 bits (192), Expect = 4e-18
 Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 40/137 (29%)

Query: 100 KFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASS 159
                      RR H  + P     C    ++S+ LK H++ H   G+K      P    
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHT--GEK------PYK-- 47

Query: 160 LAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC 219
                       C              T E C   F     LT H R HTG KP++C +C
Sbjct: 48  ------------C--------------TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81

Query: 220 SYACAQSSKLTRHMKTH 236
           + + ++S  L  HMK H
Sbjct: 82  NRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.7 bits (161), Expect = 8e-14
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 95  EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           E C  +F   + L  H R HTG KPF+C VC+ + S+S  L  HMK H
Sbjct: 51  EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 42/131 (32%)

Query: 83  STTSQEEKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKH 138
               ++ +   C++  C K +   + L+AH R HTGEKP+KCT   CD   ++S +L +H
Sbjct: 7   GPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH 66

Query: 139 MKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNC 198
            + H   G K  +                                    C  C + F   
Sbjct: 67  YRKH--TGAKPFQ------------------------------------CGVCNRSFSRS 88

Query: 199 SNLTVHRRSHT 209
            +L +H + H 
Sbjct: 89  DHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 195 FKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMP 252
             +       RR H  + P     C+    +SS L  H++TH   G+  Y+C +  C+  
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTH--TGEKPYKCTWEGCDWR 56

Query: 253 FSVPSTLEKHMRK 265
           F+    L +H RK
Sbjct: 57  FARSDELTRHYRK 69

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.2 bits (212), Expect = 3e-21
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR 247
           C+ CGK FK  S L+ H   H+  +PY C+ C     Q S + +H   H   G+  ++C+
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH--TGEKPHKCQ 61

Query: 248 FCEMPFSVPSTLEKHMR 264
            C   FS  S L  H R
Sbjct: 62  VCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 79.8 bits (198), Expect = 4e-19
 Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 38/118 (32%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDRE 152
           +C+ CGK FK  +TL  H   H+  +P+ C  C     Q + +KKH  IH   G+K    
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH--TGEK---- 56

Query: 153 EGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTG 210
             P                                C+ CGK F   SNL  H R HTG
Sbjct: 57  --PH------------------------------KCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 76.7 bits (190), Expect = 4e-18
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 38/117 (32%)

Query: 120 FKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMK 179
           F C +C  +  +S+ L  H+ IH     +      P                        
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHS--DTR------PY----------------------- 30

Query: 180 KESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
                   C++CGK F   S++  H   HTGEKP+KC++C  A +QSS L  H + H
Sbjct: 31  -------PCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 69.0 bits (170), Expect = 3e-15
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            +   C++CGK+F  ++ ++ H   HTGEKP KC VC  A SQS+ L  H + H
Sbjct: 27  TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 214 YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           + C++C  +  +SS L+ H+  H       Y C++C   F   S ++KH  
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIH--SDTRPYPCQYCGKRFHQKSDMKKHTF 50

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 84.5 bits (210), Expect = 7e-21
 Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 34/114 (29%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA 165
           +  +  R HTGEKP+ C+ CD    Q   L  H K + +     +               
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD----PNFVPAAF--------- 48

Query: 166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC 219
                                 C  CGK F   + +  H  +  G    + E  
Sbjct: 49  ---------------------VCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 200 NLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH--GRLGKDVYRCRFCEMPFSVPS 257
           +     R+HTGEKPY C  C     Q   L  H K +         + C  C   F+  +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 258 TLEKHMR 264
           T+ +H  
Sbjct: 62  TMARHAD 68

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 6/67 (8%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGE----KPYKCELCSYACAQSSKLTRHMKTHGRLGKD 242
            C  C K F+    L +H + +         + C  C     + + + RH       G D
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC--AGPD 74

Query: 243 VYRCRFC 249
                  
Sbjct: 75  GVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGE----KPFKCTVCDHACSQSAKLKKHMKIH 142
           EK   C  C K F+ +  L  H + +         F C+ C    ++   + +H    
Sbjct: 13  EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 10/33 (30%), Positives = 12/33 (36%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC 125
            C  CGK F   NT+  H  N  G    +    
Sbjct: 49  VCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 83.0 bits (206), Expect = 3e-20
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 179 KKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTH 236
           K+ +        CGK +   S+L  H R+HTGEKPY C  + C +  A+S +LTRH + H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 237 GRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
              G   ++C+ C+  FS    L  HM+
Sbjct: 61  --TGHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 78.3 bits (194), Expect = 1e-18
 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 36/123 (29%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCL 173
            T         C    ++S+ LK H++ H   G+K      P                C 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHT--GEK------PYH--------------C- 38

Query: 174 PNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM 233
                          + CG  F     LT H R HTG +P++C+ C  A ++S  L  HM
Sbjct: 39  -------------DWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

Query: 234 KTH 236
           K H
Sbjct: 86  KRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 89  EKNKEC--EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           EK   C  + CG KF   + L  H R HTG +PF+C  CD A S+S  L  HMK H
Sbjct: 33  EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 40/122 (32%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDG 146
               +   CGK +   + L+AH R HTGEKP+ C    C    ++S +L +H + H   G
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH--TG 62

Query: 147 DKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRR 206
            +                                       C+ C + F    +L +H +
Sbjct: 63  HR------------------------------------PFQCQKCDRAFSRSDHLALHMK 86

Query: 207 SH 208
            H
Sbjct: 87  RH 88

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 82.6 bits (205), Expect = 3e-20
 Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 37/110 (33%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA 165
           +  +  R H+GEKP++C +C    +QS  +K H+     +                    
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA------KF--------- 46

Query: 166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH-RRSHTGEKPY 214
                                 C  C  V    S+L VH R+ H+   P 
Sbjct: 47  ---------------------HCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.3 bits (199), Expect = 2e-19
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 200 NLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH-GRLGKDVYRCRFCEMPFSVPST 258
           +     R+H+GEKPY+C +C     QS  +  H+           + C  C+   +  S 
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA-KFHCPHCDTVIARKSD 60

Query: 259 LEKHMRK 265
           L  H+RK
Sbjct: 61  LGVHLRK 67

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGE--KPYKCELCSYACAQSSKLTRHMKTH 236
            C  C   F     + +H      E    + C  C    A+ S L  H++  
Sbjct: 17  ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGE--KPFKCTVCDHACSQSAKLKKHM-KIH 142
           EK  EC  C  +F    T++ H      E    F C  CD   ++ + L  H+ K H
Sbjct: 13  EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 7/37 (18%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 85  TSQEEKNKECEFCGKKFKYENTLQAH-RRNHTGEKPF 120
            ++      C  C      ++ L  H R+ H+   P 
Sbjct: 39  HTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.2 bits (199), Expect = 2e-19
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C  C     + + L +H R H  ++P+KC  CS+   Q S L++HMK  
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 72.9 bits (180), Expect = 9e-17
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
            S +   P KC  CSY+C+  + L  H + H       ++C +C      PS L KHM+K
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIH--CTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.4 bits (176), Expect = 3e-16
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDK 148
              ++C  C      +  L+ H R H  ++PFKC  C     Q + L KHMK     GD 
Sbjct: 7   GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF--HGDM 64

Query: 149 EDREEG 154
                G
Sbjct: 65  SGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 38/105 (36%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNL 171
            + +   P KC+ C ++CS  A L+ H +IH    D+      P                
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIH--CTDR------PF--------------- 38

Query: 172 CLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
                           C +C    K  SNL+ H +   G+     
Sbjct: 39  ---------------KCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 78.3 bits (194), Expect = 1e-18
 Identities = 26/108 (24%), Positives = 33/108 (30%), Gaps = 38/108 (35%)

Query: 107 LQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAA 166
              H      +KP+KC  C  +      L  H  +H   G+K  R               
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH--TGEKPYR--------------- 47

Query: 167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
                                C  CG  F   +NL  H R H+GEKPY
Sbjct: 48  ---------------------CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 77.5 bits (192), Expect = 2e-18
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C+ C   F+   NL  H+  HTGEKPY+C +C     + + L  H + H
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 74.4 bits (184), Expect = 2e-17
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPST 258
            +   H      +KPYKC+ C  +      L  H   H   G+  YRC  C   F+ P+ 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH--TGEKPYRCNICGAQFNRPAN 60

Query: 259 LEKHMR 264
           L+ H R
Sbjct: 61  LKTHTR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 71.7 bits (177), Expect = 2e-16
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +K  +C+ C   F+Y+  L +H+  HTGEKP++C +C    ++ A LK H +IH
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           EK   C  CG +F     L+ H R H+GEKP+
Sbjct: 43  EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.7 bits (190), Expect = 4e-18
 Identities = 25/110 (22%), Positives = 34/110 (30%), Gaps = 38/110 (34%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA 165
           +           + +KC  C  + S S+ L KH + H   G+K      P          
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH--TGEK------PY--------- 47

Query: 166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYK 215
                                 C+ CGK F   S+L  H R HTG  P  
Sbjct: 48  ---------------------KCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 74.0 bits (183), Expect = 4e-17
 Identities = 26/49 (53%), Positives = 33/49 (67%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C+ CGK F + S+L+ HRR+HTGEKPYKC+ C  A  Q S L  H + H
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 68.6 bits (169), Expect = 4e-15
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 198 CSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS 257
             +           + YKC+ C  + + SS L++H +TH   G+  Y+C  C   F   S
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH--TGEKPYKCDECGKAFIQRS 60

Query: 258 TLEKHMR 264
            L  H R
Sbjct: 61  HLIGHHR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 64.8 bits (159), Expect = 1e-13
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            +  +C+ CGK F + + L  HRR HTGEKP+KC  C  A  Q + L  H ++H
Sbjct: 16  RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFK 121
           EK  +C+ CGK F   + L  H R HTG  P  
Sbjct: 44  EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 74.0 bits (183), Expect = 3e-17
 Identities = 25/49 (51%), Positives = 29/49 (59%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           C  CGK F   S L  H+R HTGEKPYKC  C  A +Q+S L  H + H
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 74.0 bits (183), Expect = 4e-17
 Identities = 27/108 (25%), Positives = 36/108 (33%), Gaps = 38/108 (35%)

Query: 107 LQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAA 166
                  H+GEKP+ C  C  A S+S+ L +H ++H   G+K      P           
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH--TGEK------PY---------- 43

Query: 167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
                                C  CGK F   S L  H+R HT     
Sbjct: 44  --------------------KCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 68.3 bits (168), Expect = 5e-15
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           EK   C  CGK F   + L  H+R HTGEKP+KC  C  A SQ++ L  H +IH
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 65.2 bits (160), Expect = 6e-14
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 201 LTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLE 260
            +     H+GEKPY C  C  A ++SS L +H + H   G+  Y+C  C   FS  S L 
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH--TGEKPYKCLECGKAFSQNSGLI 59

Query: 261 KHMR 264
            H R
Sbjct: 60  NHQR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           EK  +C  CGK F   + L  H+R HT     
Sbjct: 40  EKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 73.7 bits (182), Expect = 4e-17
 Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHM-KTH 236
           CE C + F    +L  H RSHT EKPY C LC+ A  +   L RH  K H
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.4 bits (158), Expect = 7e-14
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHM-KIH 142
            CE C + F  +  L+ H R+HT EKP+ C +C+ A ++   L +H  KIH
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
           + + CE+C+ A A+   L RH ++H    +  Y C  C   F+    L +H +K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH--TNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 18/96 (18%), Positives = 28/96 (29%), Gaps = 39/96 (40%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSH 177
           + F C VC  A ++   LK+H + H    +K      P                      
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT--NEK------PY--------------------- 31

Query: 178 MKKESRRNDTCEFCGKVFKNCSNLTVH-RRSHTGEK 212
                     C  C + F     L  H ++ H+G  
Sbjct: 32  ---------PCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 187 TCEFCGKVFKNCSNLTVHRRS--HTGEKPYKCELCSYACAQSSKLTRHMKTHGRL 239
            C+ C +V+ + SN   H  +      K Y C  C     +   +T H+K   ++
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
            +  GE  Y+C++CS      S   RH  T  +    VY C FC   F+    +  H++
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRN--HTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           E    C+ C + + + +    H         K + C  C    ++   +  H+KI 
Sbjct: 8   EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.7 bits (130), Expect = 6e-10
 Identities = 15/99 (15%), Positives = 23/99 (23%), Gaps = 36/99 (36%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNL 171
               GE  ++C VC    +  +   +H     +   K                       
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK------VY--------------- 41

Query: 172 CLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTG 210
                           C FC K F    N+T H +    
Sbjct: 42  ---------------PCPFCFKEFTRKDNMTAHVKIIHK 65

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.9 bits (174), Expect = 6e-16
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 3/53 (5%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHT---GEKPYKCELCSYACAQSSKLTRHMKTH 236
            CE CG   +  ++L  H+R H        + CE C     +   +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 70.1 bits (172), Expect = 1e-15
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTH-GRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
            +G    +CE+C + C Q + L  H + H   +    + C FC   F  P ++  H  K
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 68.6 bits (168), Expect = 5e-15
 Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 37/108 (34%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIH-DEDGDKEDREEGPSASSLAAAAAAAALNLC 172
            +G    +C +C   C Q A L  H + H +                             
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR----------------------- 38

Query: 173 LPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCS 220
                          CEFCGK F+   ++  HR           +  S
Sbjct: 39  -------------FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 67.0 bits (164), Expect = 2e-14
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHT---GEKPFKCTVCDHACSQSAKLKKHMKIH 142
               +CE CG   + + +L  H+R H        F C  C     +   +  H    
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 84  TTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
             +       CEFCGK+F+  +++ AHR           
Sbjct: 31  AETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 70.3 bits (173), Expect = 1e-15
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 187 TCEFCGKVFKNCSNLTVHRR-SHTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDV 243
               CG++F N   L  H++  H  +K + C    C  +      L  HMK H       
Sbjct: 11  DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH--SDTRD 68

Query: 244 YRCRFC 249
           Y C F 
Sbjct: 69  YICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 69.1 bits (170), Expect = 3e-15
 Identities = 20/111 (18%), Positives = 26/111 (23%), Gaps = 43/111 (38%)

Query: 114 HTGEKPFKCTV--CDHACSQSAKLKKHMKI-HDEDGDKEDREEGPSASSLAAAAAAAALN 170
            +G     C    C    S    L  H K  H     K                      
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI--HQK------SF-------------- 39

Query: 171 LCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCELC 219
                           +C    CGK F    +L  H + H+  + Y CE  
Sbjct: 40  ----------------SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRR-NHTGEKPFKCT--VCDHACSQSAKLKKHMKIH 142
                C+F  CG+ F     L  H++  H  +K F C    C  + +    LK+HMK+H
Sbjct: 5   SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 50.6 bits (122), Expect = 9e-09
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTVC 125
           +K+  C    CGK F ++  L+ H + H+  + + C   
Sbjct: 36  QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 208 HTGEKPYKCEL--CSYACAQSSKLTRHMK-THGRLGKDVYRCRF--CEMPFSVPSTLEKH 262
            +G     C+   C    +    L  H K  H  + +  + C    C   F+    L++H
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH--IHQKSFSCPEPACGKSFNFKKHLKEH 59

Query: 263 MR 264
           M+
Sbjct: 60  MK 61

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 65.1 bits (159), Expect = 6e-14
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 173 LPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSK 228
                +     R+  C    CGK +   S+L  H R+HTGEKP+ C  + C    A+S +
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 229 LTRHMKTH 236
           L+RH +TH
Sbjct: 65  LSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 57.4 bits (139), Expect = 3e-11
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 83  STTSQEEKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKH 138
              S   ++  C    CGK +   + L+AH R HTGEKPF C+   C+   ++S +L +H
Sbjct: 9   QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68

Query: 139 MKIH 142
            + H
Sbjct: 69  RRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 199 SNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFS 254
           S  +  +   +  + + C    C     +SS L  H +TH   G+  + C +  CE  F+
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH--TGEKPFSCSWKGCERRFA 60

Query: 255 VPSTLEKHMRK 265
               L +H R 
Sbjct: 61  RSDELSRHRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 38/105 (36%)

Query: 106 TLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA 163
                + + +  +   C+   C     +S+ LK H + H   G+K      P +      
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH--TGEK------PFS------ 49

Query: 164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                   C              + + C + F     L+ HRR+H
Sbjct: 50  --------C--------------SWKGCERRFARSDELSRHRRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
             E C + F     LT H R HTG+KP++C +C    ++S  LT H++TH
Sbjct: 23  PVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 89  EKNKEC--EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            +   C  E C ++F   + L  H R HTG+KPF+C +C    S+S  L  H++ H
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 60.0 bits (146), Expect = 4e-12
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 199 SNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVP 256
           +NL  +       +PY C  E C    ++S +LTRH++ H   G+  ++CR C   FS  
Sbjct: 7   NNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIH--TGQKPFQCRICMRNFSRS 62

Query: 257 STLEKHMR 264
             L  H+R
Sbjct: 63  DHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.3 bits (100), Expect = 9e-06
 Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 42/107 (39%)

Query: 105 NTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAA 162
           N L  +       +P+ C V  CD   S+S +L +H++IH   G K  +           
Sbjct: 7   NNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIH--TGQKPFQ----------- 51

Query: 163 AAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHT 209
                                    C  C + F    +LT H R+HT
Sbjct: 52  -------------------------CRICMRNFSRSDHLTTHIRTHT 73

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 59.6 bits (144), Expect = 3e-12
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 179 KKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCS 220
              +R+   CE CGK+F++  +L  H+ SH+GEKPY     S
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.5 bits (110), Expect = 1e-07
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 84  TTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC 125
           ++ +  K   CE CGK F+    L  H+ +H+GEKP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKI--HDEDGDKEDREEGPSASSLAAA 163
           + + +    TG   F+C  C  A     +L  HM    H  D + E     P   S    
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVH--RRSHTGEKPYK 215
            +       L     K+++++   C +CG  F++  +L+VH  +  H  +    
Sbjct: 66  RS-------LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 1e-07
 Identities = 20/98 (20%), Positives = 30/98 (30%), Gaps = 31/98 (31%)

Query: 199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRL------------------- 239
           S+  ++    TG   ++C+ CS A     +LT HM   G                     
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 240 ------------GKDVYRCRFCEMPFSVPSTLEKHMRK 265
                        + V +C +C   F     L  HM K
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.3 bits (96), Expect = 6e-05
 Identities = 9/57 (15%), Positives = 14/57 (24%)

Query: 84  TTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK 140
                 +             + +L         +K  KC  C H+      L  HM 
Sbjct: 45  YRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F+  SNLT H+  HTGEKP    
Sbjct: 15  CNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 16/33 (48%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  A    S LT H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F+  + L  H+  HTGEKP   +
Sbjct: 10  EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C  A    + L  H  IH
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ C K F+  S+LTVH+R HTGEKP   
Sbjct: 15  CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC++C  +    S LT H + H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC VC  +    + L  H +IH
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ C K F+Y ++L  H+R HTGEKP   +
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 187 TCEFCGKVFKNCSNLTVH-RRSHTGEKPYKCELC 219
            C+ CGK F    +L  H ++ HT E+P+KC++ 
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 88  EEKNKECEFCGKKFKYENTLQAH-RRNHTGEKPFKCTVCDHACSQ 131
             K   C+ CGK F   + L  H ++ HT E+P KC V     S 
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMK-THGRLGKDVYRCRFCEMPFS 254
              S +  KPY C+ C    ++   L  H+K  H    +  ++C+      S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH--TSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK-IH 142
           +   + +  KP+ C  C    S+   L  H+K +H
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEKPYKCE C     Q + L  H+  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              +  GEKP+KC  C     Q A L+ H+ IH
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPY 214
           CE CG  F   ++L  H   HTG  P 
Sbjct: 14  CETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           EK  +CE CG +F     L+AH   HTG  P 
Sbjct: 9   EKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S+LT H+  HTGEKP    
Sbjct: 15  CNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG KPY C  C  A +  S LT H   H
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
            K   C  CGK F   ++L  H+  HTGEKP   
Sbjct: 10  VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG KP+ C  C  A S  + L  H  IH
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 14/30 (46%), Positives = 15/30 (50%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           CE CGK F    +L  H   HTGEKP    
Sbjct: 15  CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKCE C         L  H   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 16/35 (45%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK F     L  H   HTGEKP   +
Sbjct: 10  EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C         L  H  +H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           CE CGK + +  NL +H++ HTGE+P   
Sbjct: 15  CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 15/33 (45%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKCE C         L  H K H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C    +    L  H K+H
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK +  +  L  H++ HTGE+P   +
Sbjct: 10  EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           CE CGK F + S L  H+R HTGEKP    
Sbjct: 15  CEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY CE C  A    S+L  H + H
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 18/35 (51%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   CE CGK F +++ LQ H+R HTGEKP   +
Sbjct: 10  EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+ C  C  A    ++L++H +IH
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 7e-11
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           CE CGK +    NL +H+R H GEK    
Sbjct: 15  CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S + EKPYKCE C     +   L  H + H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + + EKP+KC  C    ++   L  H ++H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK +     L  H+R H GEK    +
Sbjct: 10  EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 56.3 bits (135), Expect = 7e-11
 Identities = 20/50 (40%), Positives = 27/50 (54%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            CE CG   K  S L  H R+HT  +PY C  C+++      LT+HMK+ 
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            CE CG + K  + L+ H R HT  +P+ CT C+ +      L KHMK  
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.7 bits (105), Expect = 7e-07
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 214 YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRK 265
           Y CE C     + S L +H++TH       Y C +C   F     L KHM+ 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTH--TDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKP+KC++C  +    S+L RH   H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 13/30 (43%), Positives = 14/30 (46%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ CGK F   S L  H   HT EKP    
Sbjct: 15  CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKPFKC +C  +    ++L +H  +H
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ CGK F   + L  H   HT EKP   +
Sbjct: 10  EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   ++L  HRR HTG +P    
Sbjct: 15  CSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKPYKC  C  A  + + L  H + H
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GEKP+KC+ C  A  +   L +H +IH
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F     L  HRR HTG +P   +
Sbjct: 10  EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF++ S L+ H+R HTGEKP    
Sbjct: 15  CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 2e-09
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C      +S L+RH + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+KC  C      ++ L +H +IH
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F++ + L  H+R HTGEKP   +
Sbjct: 10  EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKPY+C  C  A    S L  H +TH
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C K F   SNL VH+R+HTGE     
Sbjct: 15  CNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           EK  EC  C K F  ++ L  H+R HTGE     
Sbjct: 10  EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.2 bits (116), Expect = 3e-08
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP++C  C  A +  + L  H + H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ C K F + ++LT H+R H+GEKP    
Sbjct: 15  CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKPY+C++C  A +  + LT+H + H
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC+ C K F +  +L  H+R H+GEKP   +
Sbjct: 10  EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP++C VC  A S  A L +H ++H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ CGK F+  S+L  H   H+GE+P   
Sbjct: 15  CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 16/33 (48%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC++C  A   SS L +H   H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+KC VC  A   S+ L +H  +H
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ CGK F+  + L  H   H+GE+P   +
Sbjct: 10  EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF+  S+L  H+  HTGEKP    
Sbjct: 15  CHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C     ++S L RH   H
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C     +++ L +H  IH
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F+  + L  H+  HTGEKP   +
Sbjct: 10  EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ CGK F   S+L  H+R HTGEKP   
Sbjct: 15  CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S  GEK YKC++C    +QSS L  H + H
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              +  GEK +KC VC    SQS+ L+ H ++H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ CGK+F   + LQ H+R HTGEKP   +
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C K F   S+LTVH+R HTGEKP   
Sbjct: 15  CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  G+K +KC  C     QSS LT H + H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   +  G+K FKC  C    +QS+ L  H +IH
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           +K  +C  C K F   ++L  H+R HTGEKP   +
Sbjct: 10  KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S L+ H++ HTGEKP    
Sbjct: 15  CNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEK YKC  C    +++S+L++H K H
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEK +KC  C    S++++L +H KIH
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  H++ HTGEKP   +
Sbjct: 10  EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 18/29 (62%), Positives = 19/29 (65%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK FK  S+L  HRRSHTGEKP   
Sbjct: 15  CIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG++PY+C  C  A    S L  H ++H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           ++  EC  CGK FK +++L  HRR+HTGEKP   +
Sbjct: 10  QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TG++P++C  C  A    + L  H + H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S+L  HR  HTGEKP    
Sbjct: 15  CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TG+KPYKC  C     Q+S L RH   H
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG+KP+KC  C    +Q++ L +H  IH
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           +K  +C  CGK F   + L  HR  HTGEKP   +
Sbjct: 10  KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F + SNL  H++ HTGEKP    
Sbjct: 15  CAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY+C  C  A    S L  H K H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP++C  C  A +  + L  H KIH
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           EK   C  CGK F   + L  H++ HTGEKP   
Sbjct: 10  EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F + S+ T H+R HTG++P    
Sbjct: 15  CMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  A   +S  T+H + H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C  A   ++   +H ++H
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   ++   H+R HTG++P   +
Sbjct: 10  EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           CE CGK F   S    H+RSH+GEKP    
Sbjct: 15  CEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKP+KCE C      +S+   H ++H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK F   +   +H+R+H+GEKP   +
Sbjct: 10  EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKPFKC  C      +++   H + H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
               +  GEKP+ C +C         LK H++IH
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEKPY CE+C         L  H++ H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
            CE CG  F++   L  H R HTG  P 
Sbjct: 13  PCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           EK   CE CG +F++  TL++H R HTG  P 
Sbjct: 9   EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S+L  HR  HTGEKP    
Sbjct: 15  CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 16/33 (48%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C     Q+S L RH   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C    +Q++ L +H  IH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  HR  HTGEKP   +
Sbjct: 10  EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F +   L  HRR HTGEKP    
Sbjct: 15  CIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP+ C  C  A +    L +H + H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKPF C  C  A S    L +H +IH
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 17/35 (48%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F     L  HRR HTGEKP   +
Sbjct: 10  EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  C K F   SNL VH+R+HTGEKP    
Sbjct: 15  CSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.9 bits (123), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP++C  C  A    S L  H +TH
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  C K F  ++ L  H+R HTGEKP   +
Sbjct: 10  EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKPF+C+ C  A +  + L  H + H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 17/29 (58%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGKVF   S+LT H R HTGEKP   
Sbjct: 15  CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKPYKC  C     Q+S LT H + H
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKP+KC  C    +Q++ L  H +IH
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  H R HTGEKP   +
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S L  H+R HTGEKP    
Sbjct: 15  CNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG KPY+C  C  A +Q+SKL RH + H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG KP++C  C  A SQ++KL +H ++H
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
            K  +C  CGK F   + L  H+R HTGEKP   +
Sbjct: 10  GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L +H++SHTGE+    
Sbjct: 15  CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  A  + S L  H ++H
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+KC+ C  A ++ + L  H + H
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F  ++ L  H+++HTGE+    +
Sbjct: 10  EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S L  H+R HTGEKP    
Sbjct: 15  CNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 18/33 (54%), Positives = 21/33 (63%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  A +Q+SKL RH + H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+KC  C  A SQ++KL +H +IH
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  H+R HTGEKP   +
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 15/29 (51%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F + SNL  H++ HTGEKP   
Sbjct: 15  CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE+PY C +C  A    S L +H K H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGE+P+ CTVC  A +  + L KH KIH
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           E+   C  CGK F   + L  H++ HTGEKP   
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ CGK F+  S L  H+R H+GEKP    
Sbjct: 15  CKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY C+ C  +   +S L +H + H
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C+ CGK F++ + L  H+R H+GEKP   +
Sbjct: 10  EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+ C  C  +   ++ L KH ++H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 15/29 (51%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L VH + HTGEKP   
Sbjct: 15  CVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP+KC  C    ++ S L  H K H
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKPFKC  C    S+ + L  H K+H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  H + HTGEKP   +
Sbjct: 10  EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F+  S+L +H+ +H+GEKP   
Sbjct: 15  CNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 16/33 (48%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  A    S L  H  TH
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F+  ++L  H+  H+GEKP   +
Sbjct: 10  EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+KC  C  A    + L  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   +NLT H+R HTGEKP   
Sbjct: 15  CGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY+C  C  A AQ + LT+H + H
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP++C  C  A +Q A L +H +IH
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F  +  L  H+R HTGEKP   +
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C++CGK F   + L  H+R HTGEKP   
Sbjct: 15  CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKPY C+ C  A   S++L RH + H
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GEKP+ C  C  A   SA+L +H +IH
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C++CGK F     L  H+R HTGEKP   +
Sbjct: 10  EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ CGK F+   +L  H R HTGEKP    
Sbjct: 15  CKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKP+KC+ C  A  Q+  L  H++ H
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKPFKC  C  A  Q+  L  H++IH
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C+ CGK F+    L +H R HTGEKP   +
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S+L  HR  HTGEKP    
Sbjct: 15  CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/33 (48%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C     Q+S L RH   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C    +Q++ L +H  IH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  HR  HTGEKP   +
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S+LT H+  HTG+KP    
Sbjct: 15  CNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY+C  C  A +  S LT H   H
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  CGK F   ++L  H+  HTG+KP   +
Sbjct: 10  EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP++C  C  A S  + L  H  IH
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S+L  HRR HTG KP    
Sbjct: 15  CNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C     Q+S L RH + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C    +Q++ L +H ++H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  HRR HTG KP   +
Sbjct: 10  EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F++ S L +H R+HTGE     
Sbjct: 15  CNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG KPY C  C  A    S L  H +TH
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
            K   C  CGK F+ ++ L  H R HTGE     
Sbjct: 10  MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG KP+ C  C  A    + L  H + H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L +H++ HTGE+    
Sbjct: 15  CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C  +    S+L  H K H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F +++ L+ H++ HTGE+    +
Sbjct: 10  EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC+ C  + +  ++L+ H K H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK +K   +L  H+R HTGEK    
Sbjct: 15  CVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKPYKC  C     +   L  H + H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKP+KC  C     +   L  H ++H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK +K    L  H+R HTGEK    +
Sbjct: 10  EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 54.0 bits (131), Expect = 3e-10
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S L  H+R HTGEKP    
Sbjct: 15  CAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP++C  C  + + SS+L  H + H
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  CGK F   + L  H+R HTGEKP   +
Sbjct: 10  EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKPF+C  C  + S S++L  H +IH
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F +  +L+VH+R H+G+KP    
Sbjct: 15  CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKPY+C +C  A +    L+ H + H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  CGK F +  +L  H+R H+G+KP   +
Sbjct: 10  EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP++C+VC  A S    L  H +IH
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 15/29 (51%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C K F   S L VH+RSHTG KP   
Sbjct: 15  CSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG KPY C  C+   +  S+L  H ++H
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
            K   C  C K F  ++ L  H+R+HTG KP   +
Sbjct: 10  VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG KP+ C+ C    S  ++L  H + H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F     LT H  +HT EKP   
Sbjct: 15  CSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEKPY+C  C  + + S +LT+H  TH
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   +  GEKP++C+ C  + S S +L +H   H
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F     L  H   HT EKP   +
Sbjct: 10  EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C   F   S+L +H+  H GEKP   
Sbjct: 15  CRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   +  GEK +KC  CD   SQ++ L+ H  +H
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEK +KC  C    +Q+S L  H   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  C   F   ++L+ H+  H GEKP   +
Sbjct: 10  EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGKVF   S+L  H+R HTG KP    
Sbjct: 15  CNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPYKC  C     Q+S L  H + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+KC  C    +Q++ L  H +IH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F   + L  H+R HTG KP   +
Sbjct: 10  EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C K F + S L VH+++H  EKP   
Sbjct: 13  CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  C K F  ++ L  H++ H  EKP   +
Sbjct: 8   EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (105), Expect = 9e-07
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              +GEKP+ C  C  A +  S L  H +TH
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            +GEKPF C+ C+ A S  + L  H + H
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L VH++ HTGEKP   
Sbjct: 15  CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKPY+C +C  +  + S+L  H + H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  CGK F  ++ L  H++ HTGEKP   +
Sbjct: 10  EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 11/33 (33%), Positives = 22/33 (66%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP++C++C  + ++ ++L  H +IH
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   ++L  H R HT E      
Sbjct: 15  CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY C +C  A   S+ L +H++ H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP+ C VC  A   SA L +H+++H
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 14/35 (40%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F     L  H R HT E     +
Sbjct: 10  EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S+L  HRR HTGEKP    
Sbjct: 15  CNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY C  C  +  Q S L RH + H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+ C  C  +  Q + L +H +IH
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F  ++ L  HRR HTGEKP   +
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGKVF + +NL +H++ HTGE+P   
Sbjct: 15  CSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE P+ C  C       + L  H K H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGE PF C+ C    +    L  H KIH
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E    C  CGK F ++  L  H++ HTGE+P   +
Sbjct: 10  ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   SNL  H++ HT +KP    
Sbjct: 15  CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY C  C  A    S L +H K H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP+ C  C  A +  + L KH KIH
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F   + L  H++ HT +KP   +
Sbjct: 10  EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F + S L +H R+H+GEKP    
Sbjct: 15  CSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEKPY C  C  A +  S L  HM+TH
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F  ++ L  H R H+GEKP   +
Sbjct: 10  EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   +  GEKP+ C+ C  A S  + L  HM+ H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S +GEKPY C  C    +Q S L+ H +TH
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 8e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S L+ H+R+HTGEKP    
Sbjct: 15  CNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C  CGK F  ++ L AH+R HTGEKP   +
Sbjct: 10  EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKP+ C  C    SQ + L  H + H
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/29 (51%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L VH+R HTGE P   
Sbjct: 15  CRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP++C  C  + + +S+L  H + H
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC  CGK F + + L  H+R HTGE P   +
Sbjct: 10  EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP +C  C  + S +++L  H +IH
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 16/29 (55%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           CE CGK F   S L  H+R HTGEKP   
Sbjct: 15  CEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKP+KCE C     Q+S+L  H + H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GEKPFKC  C    +Q+++L  H ++H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK+F   + L +H+R HTGEKP   +
Sbjct: 10  EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK +    +LT H+R HTGEKP   
Sbjct: 15  CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP+KC  C  +  Q   LT+H + H
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKPFKC  C  + +Q   L +H ++H
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK +     L  H+R HTGEKP   +
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/29 (51%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L VH+R HTGE P   
Sbjct: 15  CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGEKPY+C  C  +  + S+L  H + H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP++C+ C  +  + ++L  H +IH
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           EK  EC  CGK F  ++ L  H+R HTGE P   
Sbjct: 10  EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ C K F   ++L  H+++HTGEKP    
Sbjct: 15  CKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 17/33 (51%), Positives = 22/33 (66%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY+C++CS A  Q + L +H KTH
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP++C VC  A +Q A L +H K H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC+ C K F  +  L  H++ HTGEKP   +
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.0 bits (128), Expect = 7e-10
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GEKPY+C+ C  A +Q   L  H++ H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
               +  GEKP++C  C  A SQ   L  H+++H
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPY 214
           C+ CGK F    +L VH R HTG  P 
Sbjct: 14  CDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           EK   C+ CGK F  + +L  H R HTG  P 
Sbjct: 9   EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L++H+R H GEKP   
Sbjct: 15  CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE+ Y+C  C  A  Q S L+ H + H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E++ EC  CGK F  ++TL  H+R H GEKP   +
Sbjct: 10  ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGE+ ++C+ C  A  Q + L  H +IH
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.0 bits (128), Expect = 7e-10
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP++C+ C    + S  L +H+++H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKPF+C  C    S S  L KH++ H
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 10/29 (34%), Positives = 12/29 (41%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ CG  F    +L  H RSH    P   
Sbjct: 15  CKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           EK  +C+ CG  F +  +L  H R+H    P   
Sbjct: 10  EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 7e-10
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L +H+R+H  +K    
Sbjct: 15  CTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKP KC  C  A    S+L  H +TH
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +C  CGK F +++ L  H+R H  +K    +
Sbjct: 10  EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEKP KCT C  A    ++L  H + H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F+   NL  H+R HTGEK    
Sbjct: 15  CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG+KP++C  C  +      L  H + H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           +K  EC  CGK F+ +  L  H+R HTGEK    +
Sbjct: 10  QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG+KPF+CT C  +      L  H +IH
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           CE CGK F   S+L  H+R HTGEKP   
Sbjct: 15  CEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKP++CE C     Q+S L  H + H
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GEKPF+C  C    +Q++ L  H ++H
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  +CE CGK+F   + L +H+R HTGEKP   +
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/29 (55%), Positives = 16/29 (55%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   SN   HRR HTGEKP   
Sbjct: 15  CSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GE+ ++C  C     Q+S   +H + H
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              +  GE+  +C+ C     Q++   +H +IH
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E+   C  CGK F   +    HRR HTGEKP   +
Sbjct: 10  ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   ++L  H+R HTGEKP    
Sbjct: 15  CNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE+P+KC  C  +  QS+ L +H + H
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGE+P KC  C  +  QSA L +H +IH
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E+  +C  CGK F     L  H+R HTGEKP   +
Sbjct: 10  ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 13/29 (44%), Positives = 14/29 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  C K F     L VH+R HT EKP   
Sbjct: 15  CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   +  G  P+KC+ C+ + S   +L  H ++H
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  G  PYKC  C  + +   +L  H + H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
               +C  C K F  +  L  H+R HT EKP   +
Sbjct: 10  VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ CGK F   ++L  H+R HTGEKP   
Sbjct: 15  CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEKPY+C+ C  A +Q++ L +H + H
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGEKP++C  C  A SQ+  L +H ++H
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK  EC+ CGK F     L  H+R HTGEKP   +
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S+L  H R H+ EK    
Sbjct: 15  CNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GE+P+KC  C     + S L  H++ H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E+  +C  CGK F   + L  H R H+ EK    +
Sbjct: 10  ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GE+PFKC  C     + + L  H+++H
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F     L  H+R+H GEKP   
Sbjct: 15  CHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               S TGE PY+C  C  A ++  +L  H +TH
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E   EC  CGK F  +  L +H+R H GEKP   +
Sbjct: 10  ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGE P++C  C  A S+  +L  H + H
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C  CGK F   S L++H++ HTGEKP    
Sbjct: 15  CTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TG K ++C  C  A  + S L+ H K H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TG K F+CT C  A ++ + L  H KIH
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
            K+ EC  CGK F  ++TL  H++ HTGEKP   +
Sbjct: 10  GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L +H+R HTGEKP   
Sbjct: 15  CSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE+ Y+C  C  A A+ S L  H + H
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E++ EC  CGK F  ++TL  H+R HTGEKP   +
Sbjct: 10  ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + TGE+ ++C+ C  A ++ + L  H +IH
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
             R  TG KPF+C  CD + S+S  L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 51.2 bits (123), Expect = 2e-09
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
             R  TG KP++C  C  + ++S  L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C+ CGK F     L  H R H+GEKP   
Sbjct: 15  CKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGEK Y C+ C  + +++  L +H + H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGEK + C  C  + S++  L KH ++H
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C+ CGK F     L  H R H+GEKP   +
Sbjct: 10  EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           C+ C K F    +L  H+R HTGE+     
Sbjct: 15  CKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +G+KPY+C+ C     Q   L +H + H
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 7e-08
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +G+KP++C  C     Q   L +H ++H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           +K  EC+ C K F     L  H+R HTGE+    
Sbjct: 10  KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEKPY+C  C  A    S L  H +TH
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S L VH R+H G      
Sbjct: 15  CNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           EK  EC  CGK F +++ L  H R H G      
Sbjct: 10  EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + +GEKP++C  C  A    + L  H + H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F     L  H+R+H GE     
Sbjct: 13  CSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 47.1 bits (113), Expect = 6e-08
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 205 RRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
               +GE PY+C  C  A  +  +L  H +TH
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           E   EC  CGK F  ++ L +H+R H GE     
Sbjct: 8   ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 111 RRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
               +GE P++C+ C  A ++  +L  H + H
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 204 HRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKTH 236
              S TGEKP+ C    C +  ++S +L+RH ++H
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 109 AHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIH 142
           +   + TGEKPF CT   C    S+S +L +H + H
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
             CG  F     L+ HRRSH+G KP    
Sbjct: 18  PGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 89  EKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK   C +  CG +F   + L  HRR+H+G KP   +
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 14/35 (40%), Positives = 15/35 (42%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGR 238
              S T  K Y C  C  A  +   LTRH K H R
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.2 bits (113), Expect = 7e-08
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 7/48 (14%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSA 157
              + T  K + C  C  A ++   L +H KIH        R+ GPS+
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH-------TRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F    +LT H++ HT +     
Sbjct: 15  CNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
            K+  C  CGK F     L  H++ HT +     
Sbjct: 10  SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.7 bits (126), Expect = 3e-09
 Identities = 20/109 (18%), Positives = 26/109 (23%), Gaps = 39/109 (35%)

Query: 113 NHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLC 172
               +       CD   S   +L  H+                                 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVT-------------------------------- 46

Query: 173 LPNSHMKKESRRNDTCEF-----CGKVFKNCSNLTVHRRSHTGEKPYKC 216
               H+    + N  C +      GK FK    L  H R HTGEK    
Sbjct: 47  --MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 9/59 (15%)

Query: 187 TCEFCGKVFKNCSNLTVH-RRSHTGEKPYKCELCSY--------ACAQSSKLTRHMKTH 236
             + C + F     L  H    H G       +C +        +     KL  H++ H
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 92  KECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           +EC   GK FK +  L  H R HTGEK    +
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.8 bits (103), Expect = 4e-06
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 9/65 (13%)

Query: 87  QEEKNKECEFCGKKFKYENTLQAH-RRNHTGEKPFK--------CTVCDHACSQSAKLKK 137
           + + ++  + C + F   + L  H    H G             C     +     KL  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 138 HMKIH 142
           H+++H
Sbjct: 81  HIRVH 85

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 7/64 (10%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHM-KTH-GRLGKDVYRCRF-----CEMPFSVPSTLE 260
              +     + C    +   +L  H+   H G   ++ + C +         F     L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 261 KHMR 264
            H+R
Sbjct: 80  NHIR 83

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGK F   S+L  H + H  EK    
Sbjct: 15  CNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GE+PY C  C     + S L  H+K H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           E+   C  CGK F   + L  H + H  EK    +
Sbjct: 10  ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GE+P+ C  C     + + L +H+K H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPY 214
           C+ CGK F+   +LT+H R HTG  P 
Sbjct: 13  CQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              +G++ Y+C+ C  +  Q   LT H + H
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 83  STTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           S+ S  ++  EC+ CGK F+ + +L  H R HTG  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              +G++ ++C  C  +  Q   L  H +IH
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S TGE PY+C  C    ++  +L  H KTH
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CGKVF     L  H+++H+G+     
Sbjct: 15  CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +   + TGE P++C  C    S+  +L  H K H
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           E   EC  CGK F  ++ L +H++ H+G+     
Sbjct: 10  ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
           TC+ CGK F   S L +H+R H GEK     
Sbjct: 14  TCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +GEK + C+ C       S L  H + H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
           EK+  C+ CGK F Y + L+ H+R H GEK    +
Sbjct: 10  EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +GEK   C  C       + L+ H ++H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           C  CG+ F   S+L  H+R HTGEKP   
Sbjct: 15  CHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S +  K ++C  C       S L +H + H
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
              + +  K  +C  C    +  + L +H +IH
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT 123
            K+ +C  CG+ F  ++ L  H+R HTGEKP   +
Sbjct: 10  TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 188 CEFCGKVFKNCSNLTVHRRS-HTGEKPYKC 216
           C  CGK F   ++L  H R  HTGEKP   
Sbjct: 15  CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRH 232
              S TG+KPY+C  C  A  Q++ L RH
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.5 bits (106), Expect = 8e-07
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRN-HTGEKPFKCT 123
           +K  EC  CGK F    +L  H R  HTGEKP   +
Sbjct: 10  KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHM-KIH 142
           +   + TG+KP++C  C  A  Q+  L +H    H
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYK 215
            C  CGK F    +L VH+RS +   P  
Sbjct: 13  LCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              S  GE PY C  C  +  Q   L  H ++ 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
               +  GE P+ C  C  + +Q   L  H +  
Sbjct: 1   GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFK 121
           E    C  CGK F    +L  H+R+ +   P  
Sbjct: 9   ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 9/66 (13%)

Query: 199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPST 258
            +    ++ H G++  KC  C     + S L+R              C  C       + 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT---------PMCEKCRKDSCQEAA 54

Query: 259 LEKHMR 264
           L K   
Sbjct: 55  LNKDEG 60

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.3 bits (99), Expect = 9e-06
 Identities = 13/109 (11%), Positives = 27/109 (24%), Gaps = 45/109 (41%)

Query: 106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA 165
           +    ++ H G++  KC+ C     + + L +                            
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------------------------- 37

Query: 166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
                             +   CE C K     + L     + +G+K  
Sbjct: 38  ------------------KTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.6 bits (92), Expect = 7e-05
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 7/54 (12%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +++++C  CG  F         R   +  K   C  C     Q A L K     
Sbjct: 16  DRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.1 bits (88), Expect = 2e-04
 Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 7/50 (14%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            C  CG +F       + R + +  K   CE C     Q + L +     
Sbjct: 20  KCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNE 62

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.6 bits (106), Expect = 6e-07
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
              +GEKPY C  C    + +++L +H K H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
            +GEKP+ C  C    S + +L +H K+H
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKC 216
           +C  C + F + + L  H++ HT +     
Sbjct: 12  SCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 83  STTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
           S+ S  EK   C  C + F   N L  H++ HT +     
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGR 238
              S  GE P+KC  C     Q + L +H +TH R
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSA 157
           +   +  GE PFKC+ CD   +Q   L +H + H        R+ GPS+
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH-------ARKSGPSS 43

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 23/191 (12%), Positives = 58/191 (30%), Gaps = 6/191 (3%)

Query: 18  TSPQTMNNNNNNSSMSNNNNICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQ 77
           ++ ++ + ++      NN      +  GT  +E  R +     +   + S     + + +
Sbjct: 19  STERSDDGSSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRATESAELPMKNNDE 78

Query: 78  LSYAMSTTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKK 137
            +      ++ +   E      +       QA   + +  +        +  ++ ++   
Sbjct: 79  GTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGN 138

Query: 138 HMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKN 197
                D +G    +    S     A +A  + +           S     C  C  V  +
Sbjct: 139 V----DNEGGSNQKP--MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFS 192

Query: 198 CSNLTVHRRSH 208
             +L  H  SH
Sbjct: 193 PLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 28/215 (13%), Positives = 50/215 (23%), Gaps = 15/215 (6%)

Query: 26  NNNNSSMSNNNNICFESPSGTLEKELQRPKSPTNKIADLSSSTSPSKQEDFQLSYAMSTT 85
               SS   N++        +  ++ Q  K+         ++T P      Q        
Sbjct: 8   TKGKSSGKGNDSTERSDDGSSQLRDKQNNKAG-------PATTEPGTSNREQYRARPGIA 60

Query: 86  SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED 145
           S +   +  E   K    E T                   D A   + K  K        
Sbjct: 61  SVQRATESAELPMKNND-EGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQ 119

Query: 146 GDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHR 205
               D     +     +                 ++       E    +           
Sbjct: 120 VTYSDTGINNANELSRSGNVD-------NEGGSNQKPMSTRIAEATSAIVSKHPARVGLP 172

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLG 240
            + +    Y+C +CS        L  H+ +HG  G
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 40.5 bits (94), Expect = 7e-05
 Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKT-HGRLGKD-VYRCRFCEMPFSVP 256
            +   ++++   E  Y+C+ C++     +  T H+ + H  +  +  Y C  C       
Sbjct: 4   HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63

Query: 257 STLEKHMRKCVVNQNMKMESHNIMQNMKMDNHNIIQ 292
             L +H  K         E +  +  +K +N  I +
Sbjct: 64  DALSEHNLKYHPG-----EENFKLTMVKRNNQTIFE 94

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 181 ESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEK 212
             ++   C    CGKV+   S+L  H R HTGE+
Sbjct: 4   GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 36

 Score = 36.8 bits (84), Expect = 3e-04
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 90  KNKECEFCGKKFKYENTLQAHRRNHTGEK 118
           K   CE+C K FK++++LQAH R HT EK
Sbjct: 8   KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGEK 212
            +CGK F     L  H+R+HTGEK
Sbjct: 8   SYCGKRFTRSDELQRHKRTHTGEK 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.88
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.72
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.67
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.6
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.6
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.55
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.53
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.53
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.33
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.33
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.29
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.28
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.26
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.19
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.1
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.03
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.03
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.95
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.88
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.86
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.86
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.86
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.85
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.84
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.83
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.81
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.75
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.72
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.68
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.66
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.63
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.58
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.56
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.53
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.5
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.45
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.42
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.3
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.29
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.29
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.27
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.26
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.26
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.26
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.26
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.25
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.24
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.23
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.21
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.21
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.18
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.18
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.18
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.16
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.15
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.44
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.14
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.43
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.41
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.12
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.09
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.09
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.08
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.98
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.98
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.94
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.83
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.81
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.77
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.34
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.19
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.87
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.77
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.75
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.44
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.37
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.98
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.34
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.74
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	93.08
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.61
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	92.48
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.59
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	90.22
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	89.75
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.53
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.5
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.49
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	89.47
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.82
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.62
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.14
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.44
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.37
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	87.31
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.89
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	85.68
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	85.36
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	85.17
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	83.06
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	82.98
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.93
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	80.72
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.29
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	80.04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.1e-33  Score=227.36  Aligned_cols=173  Identities=35%  Similarity=0.632  Sum_probs=129.7

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHH
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA  165 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
                      ..++++|.|++|++.|.....|..|++.|.+.++|.|+.|++.|.....|..|++.|+++.++.+..++..+........
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   95 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA   95 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHH
Confidence            45677899999999999999999999999888999999999999999999999999998888888888777665544333


Q ss_pred             HHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccc
Q psy5202         166 AAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYR  245 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  245 (343)
                      ....          ..++++|.|+.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+  ++++|.
T Consensus        96 H~~~----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~--~~~~~~  163 (190)
T 2i13_A           96 HQRT----------HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT--GEKPYK  163 (190)
T ss_dssp             HHHH----------HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEE
T ss_pred             HHHh----------cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC--CCCCeE
Confidence            2211          1234789999999999999999999999999999999999999999999999999997  788999


Q ss_pred             cCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         246 CRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       246 C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      |++|++.|.+...|..|++.|++..
T Consensus       164 C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          164 CPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             CTTTCCEESSHHHHHHHHTTC----
T ss_pred             CCCCCCccCCHHHHHHHHHhcCCCC
Confidence            9999999999999999999987653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=6.3e-30  Score=205.32  Aligned_cols=170  Identities=31%  Similarity=0.486  Sum_probs=131.1

Q ss_pred             CCCCCcccc--cccccccCChHHHHHHHHhccCCCCeec--CCCCccCCCHHHHHHHHHHhccCCCCccc--cCCCCcch
Q psy5202          86 SQEEKNKEC--EFCGKKFKYENTLQAHRRNHTGEKPFKC--TVCDHACSQSAKLKKHMKIHDEDGDKEDR--EEGPSASS  159 (343)
Q Consensus        86 ~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~--~~~~~~~~  159 (343)
                      ....++|.|  +.|++.|.....|..|++.|.++++|.|  +.|++.|.+...|..|++.|+++.++.+.  .++..+..
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            345688999  6899999999999999999999999999  88999999999999999999988777777  66666655


Q ss_pred             HHHHHHHHHhhhcCCCCcccccCCCCccc--ccCcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHH
Q psy5202         160 LAAAAAAAALNLCLPNSHMKKESRRNDTC--EFCGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKT  235 (343)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~  235 (343)
                      ...........      +  ..+..+|.|  ..|++.|.....|..|+++|+++++|.|++  |++.|.....|..|+++
T Consensus        87 ~~~l~~H~~~~------h--~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A           87 KANMKKHFNRF------H--NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             HHHHHHHHHTT------S--STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             HHHHHHHHHHh------c--CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence            44333322110      0  012357888  778888888888888888888888888876  88888888888888887


Q ss_pred             hcCCCCcccccCC---CCCCCCChHHHHHHHhhhcC
Q psy5202         236 HGRLGKDVYRCRF---CEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       236 h~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~~~  268 (343)
                      |+  +   |.|..   |++.|.+...|..|++.|++
T Consensus       159 H~--~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          159 HA--G---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             SC--S---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             hC--C---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            75  3   77887   88888888888888887764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=6.9e-30  Score=198.24  Aligned_cols=140  Identities=33%  Similarity=0.613  Sum_probs=129.9

Q ss_pred             CCcccccccccccCChHHHHHHHH---hccCCCCeecCCC-----CccCCCHHHHHHHHHHhccCCCCccccCCCCcchH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRR---NHTGEKPFKCTVC-----DHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSL  160 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~  160 (343)
                      |.+|.|+.|++.|.+...|..|++   .|.+.++|.|++|     ++.|.+...|..|++.|+++               
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~---------------   65 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE---------------   65 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC---------------
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCC---------------
Confidence            357999999999999999999998   6888899998753     49999999999999999876               


Q ss_pred             HHHHHHHHhhhcCCCCcccccCCCCccccc--CcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHH-HH
Q psy5202         161 AAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHM-KT  235 (343)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~  235 (343)
                                             ++|.|++  |++.|.....|..|+++|.++++|.|++  |++.|.....|..|+ +.
T Consensus        66 -----------------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~  122 (155)
T 2gli_A           66 -----------------------KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT  122 (155)
T ss_dssp             -----------------------CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             -----------------------CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHh
Confidence                                   7899986  9999999999999999999999999998  999999999999999 77


Q ss_pred             hcCCCCcccccCC--CCCCCCChHHHHHHHhhhcC
Q psy5202         236 HGRLGKDVYRCRF--CEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       236 h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  268 (343)
                      |.  ++++|.|++  |++.|.+...|..|++.||+
T Consensus       123 H~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          123 HS--NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TC--SCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             cC--CCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            86  889999998  99999999999999999884

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=2.7e-27  Score=189.95  Aligned_cols=177  Identities=29%  Similarity=0.486  Sum_probs=125.1

Q ss_pred             hHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCC
Q psy5202         104 ENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESR  183 (343)
Q Consensus       104 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (343)
                      ...|..|++.|.++++|.|+.|++.|.....|..|++.|+++.++.+..++..+............          ..+.
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~   75 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT----------HTGE   75 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHH----------HHCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHh----------cCCC
Confidence            456889999999999999999999999999999999999999999999998887765544333221          1234


Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHM  263 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~  263 (343)
                      ++|.|+.|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+  ++++|.|++|++.|.+...|..|+
T Consensus        76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~  153 (190)
T 2i13_A           76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--GEKPYKCPECGKSFSREDNLHTHQ  153 (190)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC--CCCCeECCCCCcccCCHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999999997  889999999999999999999999


Q ss_pred             hhhcCcccccccchhHHhhhccccchhhhccccccccc
Q psy5202         264 RKCVVNQNMKMESHNIMQNMKMDNHNIIQNMKLDGHMM  301 (343)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  301 (343)
                      +.|++...+.+..         +...+.....|..|+.
T Consensus       154 ~~H~~~~~~~C~~---------C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          154 RTHTGEKPYKCPE---------CGKSFSRRDALNVHQR  182 (190)
T ss_dssp             HHHHCCCCEECTT---------TCCEESSHHHHHHHHT
T ss_pred             HhcCCCCCeECCC---------CCCccCCHHHHHHHHH
Confidence            9999887776543         3344555555555554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.1e-25  Score=167.67  Aligned_cols=114  Identities=37%  Similarity=0.640  Sum_probs=79.9

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHH
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAA  166 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++.++...                    
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~--------------------   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR--------------------   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCS--------------------
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCC--------------------
Confidence            356778888888888888888888888877777888888877777777777777653210                    


Q ss_pred             HHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHH
Q psy5202         167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                                     +.++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.....|..|++.
T Consensus        63 ---------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           63 ---------------SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             ---------------CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             ---------------CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence                           115566666666666666666666666666666666666666666666666654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=5.8e-26  Score=176.00  Aligned_cols=121  Identities=31%  Similarity=0.611  Sum_probs=86.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHHh-ccCCCC--------eecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCc
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRN-HTGEKP--------FKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSA  157 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~  157 (343)
                      ..+..|.|..|++.|.....|..|++. |.+..+        |.|.+|++.|.....|..|++.|+++            
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------   88 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE------------   88 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCC------------
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCC------------
Confidence            446678899999999999999999887 655443        56777777777777777777766654            


Q ss_pred             chHHHHHHHHHhhhcCCCCcccccCCCCccccc--CcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHH
Q psy5202         158 SSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHM  233 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~  233 (343)
                                                ++|.|.+  |++.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+
T Consensus        89 --------------------------~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~  142 (155)
T 2rpc_A           89 --------------------------KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM  142 (155)
T ss_dssp             --------------------------CSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred             --------------------------CcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence                                      5666766  7777777777777777777777777765  777777777777777


Q ss_pred             HHhcCCCCcccccC
Q psy5202         234 KTHGRLGKDVYRCR  247 (343)
Q Consensus       234 ~~h~~~~~~~~~C~  247 (343)
                      ++|+  ++++|.|.
T Consensus       143 ~~H~--~~k~~~c~  154 (155)
T 2rpc_A          143 HVHT--SDKSGPSS  154 (155)
T ss_dssp             TTTT--SCCCSCSC
T ss_pred             HHhc--CCCCCCCC
Confidence            6665  56666664

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=1e-25  Score=166.52  Aligned_cols=110  Identities=37%  Similarity=0.761  Sum_probs=58.9

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHhccCCCCeecC--CCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHH
Q psy5202          88 EEKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA  163 (343)
Q Consensus        88 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  163 (343)
                      ++++|.|.+  |++.|.....|..|++.|.+.++|.|+  .|++.|.+...|..|++.|+++                  
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------------   64 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV------------------   64 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCC------------------
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCC------------------
Confidence            345566654  666666666666666655555555555  3555555555555555555433                  


Q ss_pred             HHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceec--CcCcccccChHHHHHHHHH
Q psy5202         164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC--ELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~  235 (343)
                                          ++|.|..|++.|.....|..|+++|+++++|.|  +.|++.|.....|.+|+++
T Consensus        65 --------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           65 --------------------KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             --------------------CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             --------------------CCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence                                445555555555555555555555555555555  4455555555555555444

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.6e-25  Score=166.73  Aligned_cols=116  Identities=26%  Similarity=0.508  Sum_probs=108.1

Q ss_pred             cCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCccc
Q psy5202         115 TGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKV  194 (343)
Q Consensus       115 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  194 (343)
                      .+.++|.|++|++.|.....|..|++.|+++                                      ++|.|++|++.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------~~~~C~~C~~~   44 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGE--------------------------------------KPFECPKCGKC   44 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSC--------------------------------------CSCBCTTTCCB
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCC--------------------------------------CCeECCCCCch
Confidence            4678999999999999999999999999876                                      78999999999


Q ss_pred             ccCHHHHHHHHHH---ccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         195 FKNCSNLTVHRRS---HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       195 f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      |.....|..|++.   |.++++|.|.+|++.|.....|..|+++|+  ++++|.|++|++.|.+...|..|+++.|...
T Consensus        45 f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           45 YFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT--GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHS--SSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             hcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999996   578899999999999999999999999997  8899999999999999999999999877553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=1.2e-25  Score=166.18  Aligned_cols=112  Identities=28%  Similarity=0.657  Sum_probs=106.2

Q ss_pred             cCCCCeecCC--CCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccc--c
Q psy5202         115 TGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCE--F  190 (343)
Q Consensus       115 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~  190 (343)
                      .++++|.|.+  |++.|.+...|..|++.|+++                                      ++|.|+  .
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------~~~~C~~~~   43 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE--------------------------------------KPYQCDFKD   43 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTT--------------------------------------CCEECCSTT
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCC--------------------------------------CCccCCCCC
Confidence            4678999997  999999999999999999876                                      789999  7


Q ss_pred             CcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc--CCCCCCCCChHHHHHHHhhh
Q psy5202         191 CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC--RFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       191 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|+  ++++|.|  +.|++.|.+...|..|++.|
T Consensus        44 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           44 CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT--GEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--TCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhc--CCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999997  7899999  89999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=3.4e-26  Score=171.03  Aligned_cols=108  Identities=25%  Similarity=0.478  Sum_probs=70.4

Q ss_pred             HHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCccccc
Q psy5202         111 RRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF  190 (343)
Q Consensus       111 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~  190 (343)
                      .++|.|+++|.|++|++.|.....|..|++.|.++                                      ++|.|++
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~--------------------------------------k~~~C~~   55 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWE--------------------------------------KKYPCRY   55 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCC--------------------------------------SCEECSS
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCC--------------------------------------CCeeCCc
Confidence            34455666666666666666666666666666544                                      5666666


Q ss_pred             CcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCC----CCcccccCCCCCCCCCh
Q psy5202         191 CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRL----GKDVYRCRFCEMPFSVP  256 (343)
Q Consensus       191 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~~~C~~C~~~f~~~  256 (343)
                      |++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++.    ..++|+|..|++.|...
T Consensus        56 C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           56 CEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             cCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            6666777777777776777777777777777777777777777666521    12457788888777644

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=2.3e-25  Score=165.87  Aligned_cols=82  Identities=32%  Similarity=0.656  Sum_probs=38.5

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHHhcCCCCcccccC--CCCCCCCChHHHH
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCR--FCEMPFSVPSTLE  260 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~--~C~~~f~~~~~l~  260 (343)
                      +|.|..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|+  ++++|.|+  .|++.|.+...|.
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~  111 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT--GDRPYVCPFDGCNKKFAQSTNLK  111 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHH--CCCCCCCCSTTCCCCCSSTTTTH
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC--CCCceECCCCCCCCccCCHHHHH
Confidence            3444444444444444444444444444444443  4444544444555544443  34444553  2555555555555


Q ss_pred             HHHhhhcC
Q psy5202         261 KHMRKCVV  268 (343)
Q Consensus       261 ~H~~~~~~  268 (343)
                      .|++.|++
T Consensus       112 ~H~~~H~~  119 (124)
T 1ubd_C          112 SHILTHAK  119 (124)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHHcc
Confidence            55544443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=3.9e-25  Score=165.29  Aligned_cols=107  Identities=21%  Similarity=0.376  Sum_probs=98.4

Q ss_pred             ccCCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHH
Q psy5202          83 STTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAA  162 (343)
Q Consensus        83 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~  162 (343)
                      ...+.|+++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|.++                 
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~-----------------   76 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGE-----------------   76 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTC-----------------
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCC-----------------
Confidence            345678999999999999999999999999999999999999999999999999999999876                 


Q ss_pred             HHHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCC------ceecCcCcccccChH
Q psy5202         163 AAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEK------PYKCELCSYACAQSS  227 (343)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~~  227 (343)
                                           ++|.|++|++.|.....|..|+++|++++      +|+|.+|++.|....
T Consensus        77 ---------------------k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           77 ---------------------RRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             ---------------------CCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             ---------------------ccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence                                 88999999999999999999999998764      599999999887543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=7.5e-25  Score=163.05  Aligned_cols=116  Identities=35%  Similarity=0.656  Sum_probs=103.4

Q ss_pred             CCCccccc--ccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHH
Q psy5202          88 EEKNKECE--FCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAA  165 (343)
Q Consensus        88 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
                      ++++|.|+  .|++.|.....|..|++.| +.++|.|+.|++.|.+...|..|++.|+++                    
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------   60 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE--------------------   60 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCC--------------------
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCC--------------------
Confidence            35789999  8999999999999999999 889999999999999999999999999876                    


Q ss_pred             HHHhhhcCCCCcccccCCCCccccc--CcccccCHHHHHHHHHHccCCCceecC--cCcccccChHHHHHHHHHhcCCCC
Q psy5202         166 AAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGK  241 (343)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~  241 (343)
                                        ++|.|.+  |++.|.....|..|+++|+++++|.|+  .|++.|.....|..|+++|+  ++
T Consensus        61 ------------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~--~~  120 (124)
T 1ubd_C           61 ------------------KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA--KA  120 (124)
T ss_dssp             ------------------CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred             ------------------CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHc--cc
Confidence                              7899986  999999999999999999999999996  59999999999999999997  66


Q ss_pred             ccc
Q psy5202         242 DVY  244 (343)
Q Consensus       242 ~~~  244 (343)
                      +++
T Consensus       121 k~~  123 (124)
T 1ubd_C          121 KNN  123 (124)
T ss_dssp             ---
T ss_pred             ccC
Confidence            654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.90  E-value=5e-24  Score=165.04  Aligned_cols=128  Identities=29%  Similarity=0.515  Sum_probs=110.2

Q ss_pred             CCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccc
Q psy5202         116 GEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVF  195 (343)
Q Consensus       116 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  195 (343)
                      ....|.|..|++.|.+...|..|++.+|.......                             ......|.|.+|++.|
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~-----------------------------~~~~~~~~C~~C~~~f   72 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQN-----------------------------NHVCYWEECPREGKSF   72 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCS-----------------------------SCCCCBTTCTTSSCCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccC-----------------------------CccccccCCCCccccc
Confidence            46789999999999999999999998554321000                             0001348999999999


Q ss_pred             cCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHHhcCCCCcccccCC--CCCCCCChHHHHHHHhhhcCccc
Q psy5202         196 KNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       196 ~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      .....|..|+++|+++++|.|.+  |++.|.....|..|+++|+  ++++|.|.+  |++.|.+...|..|++.|++...
T Consensus        73 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A           73 KAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT--GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             SSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTC--SSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             CCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhC--CCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            99999999999999999999998  9999999999999999997  889999997  99999999999999999998776


Q ss_pred             ccc
Q psy5202         272 MKM  274 (343)
Q Consensus       272 ~~~  274 (343)
                      +.+
T Consensus       151 ~~c  153 (155)
T 2rpc_A          151 GPS  153 (155)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.88  E-value=3.4e-22  Score=160.12  Aligned_cols=141  Identities=26%  Similarity=0.384  Sum_probs=121.5

Q ss_pred             CCCCeec--CCCCccCCCHHHHHHHHHHhccCCCCcc--ccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccc--
Q psy5202         116 GEKPFKC--TVCDHACSQSAKLKKHMKIHDEDGDKED--REEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCE--  189 (343)
Q Consensus       116 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--  189 (343)
                      ..++|.|  +.|++.|.....|..|++.|+++.++.+  ..++..+...........          ...++++|.|.  
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~----------~h~~~~~~~C~~~   78 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL----------THTGEKNFTCDSD   78 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHT----------TTTTCCCEECCSS
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHH----------HccCCCceeCCCC
Confidence            4688999  6899999999999999999999999999  778887766554433321          12345789999  


Q ss_pred             cCcccccCHHHHHHHH-HHc-cCCCceec--CcCcccccChHHHHHHHHHhcCCCCcccccCC--CCCCCCChHHHHHHH
Q psy5202         190 FCGKVFKNCSNLTVHR-RSH-TGEKPYKC--ELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHM  263 (343)
Q Consensus       190 ~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~  263 (343)
                      .|++.|.....|..|+ +.| .++++|.|  ..|++.|.....|..|+++|+  ++++|.|++  |++.|.+...|..|+
T Consensus        79 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A           79 GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT--QQLPYECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             SCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS--SSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC--CCCCccCCCCCCCchhcCHHHHHHHH
Confidence            8999999999999999 556 46889999  889999999999999999997  889999988  999999999999999


Q ss_pred             hhhcC
Q psy5202         264 RKCVV  268 (343)
Q Consensus       264 ~~~~~  268 (343)
                      +.|++
T Consensus       157 ~~H~~  161 (190)
T 1tf6_A          157 KVHAG  161 (190)
T ss_dssp             TSSCS
T ss_pred             HHhCC
Confidence            99886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=6.4e-23  Score=158.79  Aligned_cols=115  Identities=39%  Similarity=0.721  Sum_probs=107.0

Q ss_pred             CCCCCCccccccc-----ccccCChHHHHHHHHhccCCCCeecCC--CCccCCCHHHHHHHHHHhccCCCCccccCCCCc
Q psy5202          85 TSQEEKNKECEFC-----GKKFKYENTLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDEDGDKEDREEGPSA  157 (343)
Q Consensus        85 ~~~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~  157 (343)
                      .+.++++|.|.+|     ++.|.....|..|++.|.++++|.|++  |++.|.+...|..|++.|+++            
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------   95 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGE------------   95 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTC------------
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCC------------
Confidence            4567889998753     499999999999999999999999986  999999999999999999876            


Q ss_pred             chHHHHHHHHHhhhcCCCCcccccCCCCccccc--CcccccCHHHHHHHH-HHccCCCceecCc--CcccccChHHHHHH
Q psy5202         158 SSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKVFKNCSNLTVHR-RSHTGEKPYKCEL--CSYACAQSSKLTRH  232 (343)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~L~~H  232 (343)
                                                ++|.|++  |++.|.....|..|+ +.|.++++|.|.+  |++.|.....|..|
T Consensus        96 --------------------------~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H  149 (155)
T 2gli_A           96 --------------------------KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH  149 (155)
T ss_dssp             --------------------------CCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHH
T ss_pred             --------------------------CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHH
Confidence                                      7899998  999999999999998 7899999999998  99999999999999


Q ss_pred             HHHhc
Q psy5202         233 MKTHG  237 (343)
Q Consensus       233 ~~~h~  237 (343)
                      +++|+
T Consensus       150 ~~~hh  154 (155)
T 2gli_A          150 VKTVH  154 (155)
T ss_dssp             HHHSC
T ss_pred             HHhhc
Confidence            99986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=8.6e-21  Score=136.82  Aligned_cols=92  Identities=32%  Similarity=0.681  Sum_probs=74.4

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHH
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAA  166 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
                      ..+++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|+++                     
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------   71 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE---------------------   71 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCC---------------------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCC---------------------
Confidence            45678999999999999999999999888888888888888888888888888777654                     


Q ss_pred             HHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceec
Q psy5202         167 AALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC  216 (343)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  216 (343)
                                       ++|.|.+|++.|.....|..|+++|+++++|.+
T Consensus        72 -----------------~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           72 -----------------KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             -----------------CTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             -----------------CCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence                             667788888888888888888777777777654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.8e-21  Score=135.51  Aligned_cols=89  Identities=37%  Similarity=0.744  Sum_probs=83.8

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHH
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEK  261 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  261 (343)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|+  ++++|.|.+|++.|.+...|..
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS--DERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC--CCCCEECSSSSCEESSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHHHHH
Confidence            34889999999999999999999999999999999999999999999999999997  7899999999999999999999


Q ss_pred             HHhhhcCcccc
Q psy5202         262 HMRKCVVNQNM  272 (343)
Q Consensus       262 H~~~~~~~~~~  272 (343)
                      |++.|++....
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999876543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.84  E-value=4.4e-21  Score=131.52  Aligned_cols=82  Identities=34%  Similarity=0.659  Sum_probs=78.4

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHh
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      +|.|.+|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+  ++++|.|+.|++.|.+...|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT--GEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH--TCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc--CCCCCcCCCcchhhCChHHHHHHHH
Confidence            48899999999999999999999999999999999999999999999999997  7899999999999999999999999


Q ss_pred             hhcC
Q psy5202         265 KCVV  268 (343)
Q Consensus       265 ~~~~  268 (343)
                      .|++
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9863

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.84  E-value=1.6e-20  Score=135.36  Aligned_cols=90  Identities=29%  Similarity=0.655  Sum_probs=84.5

Q ss_pred             cCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHH
Q psy5202         181 ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLE  260 (343)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~  260 (343)
                      ..+++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+  ++++|.|.+|++.|.+...|.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS--KEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC--CCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhC--CCCCeECCCcCCcccCHHHHH
Confidence            345789999999999999999999999999999999999999999999999999997  789999999999999999999


Q ss_pred             HHHhhhcCcccc
Q psy5202         261 KHMRKCVVNQNM  272 (343)
Q Consensus       261 ~H~~~~~~~~~~  272 (343)
                      .|++.|++...+
T Consensus        91 ~H~~~H~~~~~~  102 (106)
T 2ee8_A           91 VHKTLHMQTSSP  102 (106)
T ss_dssp             HHHHHTTSCCCC
T ss_pred             HHHHHhCCCCCC
Confidence            999999876654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.83  E-value=8.9e-21  Score=132.44  Aligned_cols=86  Identities=30%  Similarity=0.684  Sum_probs=80.1

Q ss_pred             CCCcccc--cCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHH
Q psy5202         183 RRNDTCE--FCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLE  260 (343)
Q Consensus       183 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~  260 (343)
                      +++|.|+  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  ++++|.|++|++.|.+...|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT--GEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC--CCCCccCCCCCchhCCHHHHH
Confidence            3789998  599999999999999999999999999999999999999999999997  789999999999999999999


Q ss_pred             HHHhhhcCcc
Q psy5202         261 KHMRKCVVNQ  270 (343)
Q Consensus       261 ~H~~~~~~~~  270 (343)
                      .|++.|++..
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999998643

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.6e-20  Score=131.42  Aligned_cols=88  Identities=31%  Similarity=0.716  Sum_probs=80.3

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHH
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEK  261 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  261 (343)
                      +.++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+....++|.|.+|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            34889999999999999999999999999999999999999999999999999998332489999999999999999999


Q ss_pred             HHhhhcCc
Q psy5202         262 HMRKCVVN  269 (343)
Q Consensus       262 H~~~~~~~  269 (343)
                      |++..|..
T Consensus        84 H~~~~H~~   91 (95)
T 2yt9_A           84 HIKQVHSG   91 (95)
T ss_dssp             HHHHTSCC
T ss_pred             HHHHhcCC
Confidence            99865543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1e-20  Score=136.67  Aligned_cols=59  Identities=19%  Similarity=0.287  Sum_probs=34.7

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHH-HhcCCCCccccc
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMK-THGRLGKDVYRC  246 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~C  246 (343)
                      +|.|.+|++.|.....|..|++ |.++++|+|.+|++.|.....|..|++ .|.  ++++|.|
T Consensus        42 ~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~--~~~~~~~  101 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN--QNNMAPT  101 (107)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC--CCCCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcC--CCCCCCC
Confidence            4556666666666666666653 666666666666666666666666665 443  5555554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=3.2e-20  Score=131.27  Aligned_cols=57  Identities=44%  Similarity=0.905  Sum_probs=33.5

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      ++++|.|.+|++.|.....|..|++.|.+.++|.|++|++.|.....|..|++.|++
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   61 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD   61 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCC
Confidence            345566666666666666666666666655555555555555555555555555543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=9.7e-22  Score=144.03  Aligned_cols=96  Identities=22%  Similarity=0.301  Sum_probs=64.0

Q ss_pred             HHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHH--hccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccC
Q psy5202         105 NTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKI--HDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKES  182 (343)
Q Consensus       105 ~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (343)
                      ..|..|+++|.++++|.|.+|++.|.....|..|++.  |.+..                                    
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~------------------------------------   48 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDD------------------------------------   48 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCS------------------------------------
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccC------------------------------------
Confidence            3466677777777777777777777777777777776  32220                                    


Q ss_pred             CCCcccccCcccc--cCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         183 RRNDTCEFCGKVF--KNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       183 ~~~~~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                       ..+.|.+|++.|  .....|..|+++|.++++|.|.+|++.|.....|.+|++.|+
T Consensus        49 -~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           49 -NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             -CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             -CCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhC
Confidence             223477777666  666666677666666667777777777777777777766665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=3.8e-20  Score=134.35  Aligned_cols=84  Identities=30%  Similarity=0.634  Sum_probs=80.5

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHH
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEK  261 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  261 (343)
                      ++++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+  ++++|.|++|++.|.+...|..
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT--GIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC--CCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC--CCCCeeCCCCcchhcCHHHHHH
Confidence            4589999 999999999999999999999999999999999999999999999997  7899999999999999999999


Q ss_pred             HHhhhcC
Q psy5202         262 HMRKCVV  268 (343)
Q Consensus       262 H~~~~~~  268 (343)
                      |++.|+.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            9999874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=5e-20  Score=128.57  Aligned_cols=54  Identities=39%  Similarity=0.767  Sum_probs=33.9

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           33 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            455666666666666666666666666666666666666666666666666664

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=1.6e-21  Score=142.89  Aligned_cols=89  Identities=19%  Similarity=0.301  Sum_probs=81.2

Q ss_pred             CCCcccccCcccccCHHHHHHHHHH--ccCCCcee-cCcCcccc--cChHHHHHHHHHhcCCCCcccccCCCCCCCCChH
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRS--HTGEKPYK-CELCSYAC--AQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS  257 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~  257 (343)
                      +++|.|.+|++.|.....|..|++.  |.+.+++. |.+|++.|  .....|..|+++|.  ++++|.|.+|++.|.+..
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~--~~~~~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED--AQKVLKCMYCGHSFESLQ   94 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC--CCSSCBCSSSCCBCSSHH
T ss_pred             CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC--CCcceECCCCCCccCCHH
Confidence            3889999999999999999999999  87777655 99999999  89999999999997  889999999999999999


Q ss_pred             HHHHHHhhhcCccccc
Q psy5202         258 TLEKHMRKCVVNQNMK  273 (343)
Q Consensus       258 ~l~~H~~~~~~~~~~~  273 (343)
                      .|..|++.||......
T Consensus        95 ~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           95 DLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             HHHHHHHHTTTTTCSC
T ss_pred             HHHHHHHHhCCcccCC
Confidence            9999999998766543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=9.3e-20  Score=124.83  Aligned_cols=81  Identities=40%  Similarity=0.807  Sum_probs=56.5

Q ss_pred             CeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccccCH
Q psy5202         119 PFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNC  198 (343)
Q Consensus       119 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  198 (343)
                      +|.|.+|++.|.....|..|++.|+++                                      ++|.|..|++.|...
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------~~~~C~~C~~~f~~~   42 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT--------------------------------------RPYPCQYCGKRFHQK   42 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC--------------------------------------CCEECSSSCCEESSH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC--------------------------------------CCeeCCcCChhhCCH
Confidence            466666666666666666666666544                                      556777777777777


Q ss_pred             HHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         199 SNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       199 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ..|..|++.|+++++|.|.+|++.|.....|..|+++|+
T Consensus        43 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           43 SDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             HHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            777777777777777777777777777777777777764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.5e-19  Score=131.18  Aligned_cols=86  Identities=30%  Similarity=0.638  Sum_probs=64.0

Q ss_pred             hccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCc
Q psy5202         113 NHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCG  192 (343)
Q Consensus       113 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~  192 (343)
                      .|.++++|.| .|++.|.....|..|++.|+++                                      ++|.|.+|+
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~--------------------------------------~~~~C~~C~   44 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGL--------------------------------------RPYGCGVCG   44 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCC--------------------------------------CSEECTTTS
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCC--------------------------------------cCccCCCCC
Confidence            3556666777 6777777777777777766654                                      567777777


Q ss_pred             ccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         193 KVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       193 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +.|.....|..|+++|+++++|.|.+|++.|.....|.+|++.|+
T Consensus        45 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           45 KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             CEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcc
Confidence            777777777777777777788888888888888888888887775

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=1.6e-19  Score=130.36  Aligned_cols=92  Identities=17%  Similarity=0.272  Sum_probs=84.4

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHH
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAA  164 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~  164 (343)
                      .+.++++|.|.+|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|++ |.++                   
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~-------------------   67 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEY-------------------   67 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCST-------------------
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCC-------------------
Confidence            3456789999999999999999999999984  68999999999999999999996 7765                   


Q ss_pred             HHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHH-HccCCCceecC
Q psy5202         165 AAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRR-SHTGEKPYKCE  217 (343)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  217 (343)
                                         ++|.|.+|++.|.....|..|++ .|.++++|.|.
T Consensus        68 -------------------~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           68 -------------------KKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             -------------------GGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             -------------------CCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence                               78999999999999999999997 89999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=6.1e-19  Score=125.60  Aligned_cols=84  Identities=42%  Similarity=0.856  Sum_probs=79.5

Q ss_pred             CCCCccccc--CcccccCHHHHHHHHHHccCCCceecC--cCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChH
Q psy5202         182 SRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPS  257 (343)
Q Consensus       182 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~  257 (343)
                      ..+.|.|.+  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+  ++++|.|.+|++.|.+..
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT--GAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT--SCCSCBCSSSCCBCSSHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC--CCCCeECCCCcCccCCHH
Confidence            347899997  999999999999999999999999996  69999999999999999997  889999999999999999


Q ss_pred             HHHHHHhhhc
Q psy5202         258 TLEKHMRKCV  267 (343)
Q Consensus       258 ~l~~H~~~~~  267 (343)
                      .|..|++.|.
T Consensus        90 ~l~~H~~~H~   99 (100)
T 2ebt_A           90 HLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999999985

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=7.4e-19  Score=123.89  Aligned_cols=57  Identities=33%  Similarity=0.752  Sum_probs=36.1

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|++
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   60 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG   60 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence            455666666666666666666666666666666666666666666666666655554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.77  E-value=4.7e-19  Score=123.28  Aligned_cols=81  Identities=41%  Similarity=0.906  Sum_probs=77.9

Q ss_pred             CCccccc--CcccccCHHHHHHHHHHccCCCceecC--cCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHH
Q psy5202         184 RNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTL  259 (343)
Q Consensus       184 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l  259 (343)
                      ..|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|.  ++++|.|+.|++.|.+...|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT--GHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH--CCCCEECSSSSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC--CCCCccCCCCCcccCCHHHH
Confidence            6799999  999999999999999999999999997  59999999999999999997  78999999999999999999


Q ss_pred             HHHHhhh
Q psy5202         260 EKHMRKC  266 (343)
Q Consensus       260 ~~H~~~~  266 (343)
                      ..|++.|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=4.1e-20  Score=128.35  Aligned_cols=83  Identities=28%  Similarity=0.421  Sum_probs=79.1

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHM  263 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~  263 (343)
                      ++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+   ..+|.|..|++.|.+...|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~---~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH---ILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC---CCcchHHHHHHHHHHHhhhHHHH
Confidence            689999999999999999999999999999999999999999999999999997   48899999999999999999999


Q ss_pred             hhhcCc
Q psy5202         264 RKCVVN  269 (343)
Q Consensus       264 ~~~~~~  269 (343)
                      +++|..
T Consensus        79 ~~~h~~   84 (88)
T 1llm_C           79 ARLKKL   84 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998743

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=1.1e-18  Score=110.13  Aligned_cols=54  Identities=39%  Similarity=0.825  Sum_probs=28.8

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ++|.|.+||+.|.....|..|+++|+|++||.|.+||+.|.....|.+|+++|.
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            455555555555555555555555555555555555555555555555555553

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.74  E-value=3.1e-18  Score=117.96  Aligned_cols=78  Identities=38%  Similarity=0.711  Sum_probs=74.5

Q ss_pred             Cccc--ccCcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHHhcCCCCcccccCC---CCCCCCChH
Q psy5202         185 NDTC--EFCGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRF---CEMPFSVPS  257 (343)
Q Consensus       185 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~---C~~~f~~~~  257 (343)
                      +|.|  +.|++.|.....|..|+++|.++++|.|++  |++.|.....|.+|+++|+  +   |.|..   |++.|.+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA--G---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH--S---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC--C---CCCCCCCCCCCccCCHH
Confidence            4889  899999999999999999999999999998  9999999999999999997  4   99999   999999999


Q ss_pred             HHHHHHhhhc
Q psy5202         258 TLEKHMRKCV  267 (343)
Q Consensus       258 ~l~~H~~~~~  267 (343)
                      .|..|++.||
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            9999999886

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=2.1e-18  Score=108.89  Aligned_cols=59  Identities=25%  Similarity=0.522  Sum_probs=55.2

Q ss_pred             CCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         210 GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       210 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      .|+||+|.+|++.|.....|..|+++|.  ++++|.|.+||+.|.....|..|++.|.+..
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht--~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHL--GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHH--TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhC--CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3799999999999999999999999997  8999999999999999999999999987654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=9.7e-18  Score=119.30  Aligned_cols=84  Identities=33%  Similarity=0.745  Sum_probs=58.0

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHhccCCCCeecC--CCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHH
Q psy5202          88 EEKNKECEF--CGKKFKYENTLQAHRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAA  163 (343)
Q Consensus        88 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~  163 (343)
                      .+++|.|.+  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++                  
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------------   73 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA------------------   73 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSC------------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCC------------------
Confidence            456788886  888888888888888888777777775  4666666666666666666544                  


Q ss_pred             HHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHcc
Q psy5202         164 AAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHT  209 (343)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  209 (343)
                                          ++|.|.+|++.|.....|..|+++|.
T Consensus        74 --------------------~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           74 --------------------KPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             --------------------CSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             --------------------CCeECCCCcCccCCHHHHHHHHHHhC
Confidence                                45666666666666666666666554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=4.8e-18  Score=118.11  Aligned_cols=53  Identities=40%  Similarity=0.788  Sum_probs=37.3

Q ss_pred             CCcccc--cCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         184 RNDTCE--FCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       184 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|+  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|
T Consensus        34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            456665  37777777777777777777777777777777777777777777666

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.72  E-value=7.2e-19  Score=121.99  Aligned_cols=54  Identities=37%  Similarity=0.786  Sum_probs=31.6

Q ss_pred             CcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      ++|.|.+|++.|.....|..|+++|.++++|.|+.|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC
Confidence            455666666666666666666666555555555555555555555555555554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.8e-17  Score=110.79  Aligned_cols=71  Identities=28%  Similarity=0.630  Sum_probs=66.5

Q ss_pred             CCCCccccc--CcccccCHHHHHHHHH-HccCCCceecCc--CcccccChHHHHHHHHHhcCCCCcccccCCCCCCCC
Q psy5202         182 SRRNDTCEF--CGKVFKNCSNLTVHRR-SHTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFS  254 (343)
Q Consensus       182 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~  254 (343)
                      +.++|.|..  |++.|.....|..|++ .|.++++|.|.+  |++.|.....|.+|+++|+  ++++|.|.+|++.|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS--DTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH--TSCCCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC--CCCCeeCCCCCCCCC
Confidence            347899987  9999999999999999 799999999999  9999999999999999997  889999999999984

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=9.4e-17  Score=110.46  Aligned_cols=78  Identities=27%  Similarity=0.519  Sum_probs=72.9

Q ss_pred             Ceec--CCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCccccc--Cccc
Q psy5202         119 PFKC--TVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEF--CGKV  194 (343)
Q Consensus       119 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~  194 (343)
                      ||.|  +.|++.|.....|..|++.|.++                                      ++|.|+.  |++.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------~~~~C~~~~C~~~   42 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQ--------------------------------------LPYECPHEGCDKR   42 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTT--------------------------------------CCEECCSTTCCCE
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCC--------------------------------------CCeeCCCCCCcCc
Confidence            5889  88999999999999999998876                                      7899998  9999


Q ss_pred             ccCHHHHHHHHHHccCCCceecCc---CcccccChHHHHHHHHHhc
Q psy5202         195 FKNCSNLTVHRRSHTGEKPYKCEL---CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       195 f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.....|..|+++|++   |.|..   |++.|.....|..|+++|+
T Consensus        43 f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           43 FSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            9999999999999998   99999   9999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.67  E-value=6.3e-18  Score=126.24  Aligned_cols=80  Identities=16%  Similarity=0.258  Sum_probs=62.4

Q ss_pred             CcccccCcccc------cCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHH
Q psy5202         185 NDTCEFCGKVF------KNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPST  258 (343)
Q Consensus       185 ~~~C~~C~~~f------~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~  258 (343)
                      .+.|++|++.|      .....|..|+ .|+++++|.|.+|++.|.....|..|+++|    +++|.|++|++.|.+...
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H----~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT----CCCCBCTTTCCBCSSHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC----CCCCCCCCCCcccCCHHH
Confidence            34455555444      4566666666 588888899999999999999999998887    567899999999999999


Q ss_pred             HHHHHhhhcCc
Q psy5202         259 LEKHMRKCVVN  269 (343)
Q Consensus       259 l~~H~~~~~~~  269 (343)
                      |..|++.|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999888754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.7e-17  Score=112.78  Aligned_cols=68  Identities=18%  Similarity=0.365  Sum_probs=59.6

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCC----CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGE----KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPF  253 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f  253 (343)
                      ++|.|.+|++.|.....|..|++.|++.    ++|.|.+|++.|.....|..|+++|+  +++++.|..|+..|
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA--GPDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC--CCCSCCCCCCCCCC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc--CCCCcccCCCCCCC
Confidence            7899999999999999999998887765    68999999999999999999999987  78889999998876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=2.9e-17  Score=116.18  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=68.8

Q ss_pred             ccCHHHHHHHHHHccCCCceecCcCccccc-ChHHHHHHHHHhcCCC-CcccccCCCCCCCCChHHHHHHHhhhcCcccc
Q psy5202         195 FKNCSNLTVHRRSHTGEKPYKCELCSYACA-QSSKLTRHMKTHGRLG-KDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNM  272 (343)
Q Consensus       195 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  272 (343)
                      +.....+..|+++|.++++|.|.+|++.|. ....|.+|+++|+  + +++|.|.+|++.|.+...|..|++.|++....
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~--~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ--KLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH--HHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc--CCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            445556788999999999999999999999 9999999999997  6 88999999999999999999999999976643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6e-17  Score=111.75  Aligned_cols=84  Identities=26%  Similarity=0.442  Sum_probs=73.7

Q ss_pred             HHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCC
Q psy5202         106 TLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRN  185 (343)
Q Consensus       106 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (343)
                      .|.+|+++|.++++|.|.+|++.|.....|.+|++.|+....                                  ..++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~----------------------------------~~~~   47 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF----------------------------------VPAA   47 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC----------------------------------CCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC----------------------------------CCcc
Confidence            456789999999999999999999999999999998875410                                  1157


Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccc
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYAC  223 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  223 (343)
                      |.|..|++.|.....|..|+++|++++++.|..|+..|
T Consensus        48 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             eECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            99999999999999999999999999999999999865

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.9e-16  Score=106.35  Aligned_cols=40  Identities=28%  Similarity=0.577  Sum_probs=21.8

Q ss_pred             CCccccc--CcccccCHHHHHHHHHHccCCCceecCcCcccc
Q psy5202         184 RNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCELCSYAC  223 (343)
Q Consensus       184 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  223 (343)
                      ++|.|.+  |++.|.....|..|+++|+++++|.|.+|++.|
T Consensus        37 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           37 KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4455554  555555555555555555555555555555555

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=4.3e-16  Score=104.93  Aligned_cols=64  Identities=45%  Similarity=0.808  Sum_probs=59.3

Q ss_pred             cCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         181 ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       181 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|+++|+  ++++|.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~--~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT--GSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC--CCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC--CCCCCCC
Confidence            455889999999999999999999999999999999999999999999999999997  7899987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=5.9e-17  Score=109.21  Aligned_cols=71  Identities=27%  Similarity=0.498  Sum_probs=60.5

Q ss_pred             HHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCccc
Q psy5202         201 LTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       201 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      |.+|+++|.++++|.|.+|++.|.....|..|++.++..+.++|.|++|++.|.+...|..|++.+|....
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            44688899999999999999999999999999985432234899999999999999999999999887654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.9e-16  Score=104.23  Aligned_cols=62  Identities=39%  Similarity=0.652  Sum_probs=46.0

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCc
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVN  269 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  269 (343)
                      ++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|++.|.+...|..|++.|++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT--GEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG--CSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC--CCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            45677777777777777777777777777775  667777777777777777777777777654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.5e-15  Score=106.39  Aligned_cols=74  Identities=15%  Similarity=0.272  Sum_probs=67.3

Q ss_pred             cccccCHHHHHHHHHHccCCCceecCcCcccc-cChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHH-HhhhcC
Q psy5202         192 GKVFKNCSNLTVHRRSHTGEKPYKCELCSYAC-AQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKH-MRKCVV  268 (343)
Q Consensus       192 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~  268 (343)
                      ...|.....|..|++.|.++++|.|.+|++.| .....|..|+++|   ++++|.|.+|++.|.....|..| ++.|..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h---~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC---KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH---CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH---CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            34667888899999999999999999999999 9999999999999   57999999999999999999999 777654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.7e-16  Score=108.41  Aligned_cols=70  Identities=20%  Similarity=0.457  Sum_probs=62.6

Q ss_pred             ccCCCCcccccCcccccCHHHHHHHHH-Hc---cCCCceecCcCcccccChHHHHHH-HHHhcCCCCcccccCCCCC
Q psy5202         180 KESRRNDTCEFCGKVFKNCSNLTVHRR-SH---TGEKPYKCELCSYACAQSSKLTRH-MKTHGRLGKDVYRCRFCEM  251 (343)
Q Consensus       180 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~~~C~~C~~  251 (343)
                      ..++++|.|..|++.|.....|..|++ .|   .++++|.|.+|++.|.....|..| +++|.  ++++|.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht--gekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP--GEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST--TCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC--CCCCeeCCcccC
Confidence            446689999999999999999999998 58   568999999999999999999999 78896  899999988553

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.60  E-value=1.5e-16  Score=118.78  Aligned_cols=110  Identities=17%  Similarity=0.239  Sum_probs=84.4

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhcc---CCCCeecCCCCccCC------CHHHHHHHHHHhccCCCCccccCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHT---GEKPFKCTVCDHACS------QSAKLKKHMKIHDEDGDKEDREEGP  155 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~---~~~~~~C~~C~~~f~------~~~~L~~H~~~h~~~~~~~~~~~~~  155 (343)
                      ...+.++|.|..++....  ..+..|.+.+.   ..+.+.|++|.+.|.      ....|..|+ .|+++          
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~----------   72 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAI----------   72 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHH----------
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCC----------
Confidence            345678898887654432  22344433332   345678888766554      667777777 46654          


Q ss_pred             CcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHH
Q psy5202         156 SASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                                                  ++|.|.+|++.|.....|..|+++|  +++|.|.+|++.|.....|.+|++.
T Consensus        73 ----------------------------~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           73 ----------------------------SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             ----------------------------CSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             ----------------------------CCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHH
Confidence                                        8899999999999999999999998  8899999999999999999999999


Q ss_pred             hc
Q psy5202         236 HG  237 (343)
Q Consensus       236 h~  237 (343)
                      |+
T Consensus       123 h~  124 (129)
T 2wbt_A          123 KH  124 (129)
T ss_dssp             TT
T ss_pred             HC
Confidence            97

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3e-16  Score=110.85  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=21.4

Q ss_pred             HHHHHHHHhccCCCCeecCCCCccCC-CHHHHHHHHHHhcc
Q psy5202         105 NTLQAHRRNHTGEKPFKCTVCDHACS-QSAKLKKHMKIHDE  144 (343)
Q Consensus       105 ~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~  144 (343)
                      ..+..|++.|.++++|.|.+|++.|. ....|.+|++.|++
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~   50 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK   50 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcC
Confidence            33445555555555555555555555 55555555555543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=5.7e-16  Score=100.96  Aligned_cols=63  Identities=27%  Similarity=0.563  Sum_probs=51.9

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ++|.++++|.|..|++.|.....|..|++.++..++++|.|+.|++.|.+...|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            457888888898899889888888888887432367888899999999998889999888874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=9e-16  Score=104.19  Aligned_cols=57  Identities=23%  Similarity=0.585  Sum_probs=29.9

Q ss_pred             cCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         209 TGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       209 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      ...++|.|++|++.|.....|.+|+++|+  ++++|.|.+|++.|.+...|.+|+++.|
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            34444555555555555555555555554  4555555555555555555555554443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.59  E-value=2.3e-15  Score=100.44  Aligned_cols=61  Identities=34%  Similarity=0.773  Sum_probs=50.6

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVY  244 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  244 (343)
                      +.++|.|..|++.|.....|..|+++|.++++|+|.+|++.|.....|.+|+++|+  ++++|
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS--GEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC--CSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC--CCCCC
Confidence            34778888888888888888888888888888888888888888888888888886  66664

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.7e-15  Score=105.11  Aligned_cols=80  Identities=14%  Similarity=0.192  Sum_probs=68.5

Q ss_pred             CccCCCHHHHHHHHHHhccCCCCccccCCCCcchHHHHHHHHHhhhcCCCCcccccCCCCcccccCcccc-cCHHHHHHH
Q psy5202         126 DHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNSHMKKESRRNDTCEFCGKVF-KNCSNLTVH  204 (343)
Q Consensus       126 ~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f-~~~~~l~~H  204 (343)
                      ...|.....|..|++.+.++                                      ++|.|+.|++.| .....|..|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~C~~C~k~F~~~~~~L~~H   54 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDK--------------------------------------GSVSCPTCQAVGRKTIEGLKKH   54 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHT--------------------------------------SCEECTTTCSCEESSHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCC--------------------------------------CCcCCCCCCCCcccCHHHHHHH
Confidence            34566777788888887765                                      889999999999 999999999


Q ss_pred             HHHccCCCceecCcCcccccChHHHHHH-HHHhcCCCCccccc
Q psy5202         205 RRSHTGEKPYKCELCSYACAQSSKLTRH-MKTHGRLGKDVYRC  246 (343)
Q Consensus       205 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~~~C  246 (343)
                      +++| ++++|.|.+|++.|.....|..| +++|.  ++..|.+
T Consensus        55 ~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~--~~p~~~~   94 (96)
T 2ctd_A           55 MENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN--SLPSGPS   94 (96)
T ss_dssp             HHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC--CCSSCSC
T ss_pred             HHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC--CCCCCCC
Confidence            9999 99999999999999999999999 88885  4444433

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.7e-15  Score=99.87  Aligned_cols=60  Identities=32%  Similarity=0.700  Sum_probs=34.4

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVN  269 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  269 (343)
                      |.++++|.|.+|++.|.....|..|+++|.  ++++|.|.+|++.|.+...|..|++.|++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHC--TDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGC--CSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            445555555555555555555555555554  455555555665555555555565555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.7e-15  Score=101.97  Aligned_cols=60  Identities=40%  Similarity=0.810  Sum_probs=48.2

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      ..++++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.....|.+|++.|+++
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC
Confidence            445678888888888888888888888888888888888888777777777777777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=96.08  Aligned_cols=53  Identities=49%  Similarity=1.044  Sum_probs=25.4

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|..|++.|.....|..|+++|+++++|.|++|++.|.....|..|++.|
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            34445555555555555555554444444455555555555555555554444

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=5.5e-15  Score=98.57  Aligned_cols=63  Identities=33%  Similarity=0.809  Sum_probs=58.2

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCC
Q psy5202          84 TTSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDG  146 (343)
Q Consensus        84 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  146 (343)
                      ....++++|+|..|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|++.|++++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            344567899999999999999999999999999999999999999999999999999999874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=8.2e-15  Score=96.58  Aligned_cols=62  Identities=29%  Similarity=0.572  Sum_probs=58.4

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGD  147 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  147 (343)
                      +.++++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|.+|++.|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999999999999999999999999999999998754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=4.4e-15  Score=100.20  Aligned_cols=64  Identities=25%  Similarity=0.603  Sum_probs=50.7

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhcCC-CCcccccCCCCCCCCChHHHHHHHhhhcCccc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRL-GKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      |.++++|+|.+|++.|.....|..|+++|++. ++++|.|.+|++.|.....|..|++.+|....
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            67888888888888888888888888888621 26788888888888888888888877775543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=5.3e-15  Score=93.20  Aligned_cols=57  Identities=40%  Similarity=0.867  Sum_probs=51.2

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            367899999999999999999999999999999999999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.9e-15  Score=103.51  Aligned_cols=62  Identities=21%  Similarity=0.435  Sum_probs=56.7

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHH-hc---cCCCCeecCCCCccCCCHHHHHHH-HHHhccC
Q psy5202          84 TTSQEEKNKECEFCGKKFKYENTLQAHRR-NH---TGEKPFKCTVCDHACSQSAKLKKH-MKIHDED  145 (343)
Q Consensus        84 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~  145 (343)
                      ....++++|.|.+|++.|.....|..|++ .|   .++++|.|..|++.|.....|..| ++.|.++
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence            45568899999999999999999999998 58   568999999999999999999999 7899877

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.3e-14  Score=96.09  Aligned_cols=61  Identities=43%  Similarity=0.725  Sum_probs=57.9

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      .+.++++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.....|.+|++.|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999999999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.9e-14  Score=97.60  Aligned_cols=58  Identities=22%  Similarity=0.457  Sum_probs=53.6

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      ....++|.|++|++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|++..|
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            3456789999999999999999999999999999999999999999999999986544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=1.4e-14  Score=91.25  Aligned_cols=52  Identities=38%  Similarity=0.744  Sum_probs=31.1

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|.+|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            5566666666666666666666655556666666666666666666655554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=2.8e-14  Score=89.83  Aligned_cols=56  Identities=30%  Similarity=0.692  Sum_probs=52.9

Q ss_pred             ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      ||.|.+|++.|.....|..|+++|+  ++++|.|+.|++.|.+...|..|++.|+...
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT--DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS--SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC--CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999999999999997  7899999999999999999999999998754

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=8.6e-15  Score=98.45  Aligned_cols=56  Identities=21%  Similarity=0.492  Sum_probs=51.5

Q ss_pred             CCCCcccccCcccccCHHHHHHHHH-HccCC-CceecCcCcccccChHHHHHHHHHhc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRR-SHTGE-KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ++++|.|.+|++.|.....|..|++ .|.++ ++|+|.+|++.|.....|..|++.|+
T Consensus        12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            3489999999999999999999997 57764 89999999999999999999999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.6e-14  Score=92.30  Aligned_cols=60  Identities=20%  Similarity=0.471  Sum_probs=55.4

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHh-c-cCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRN-H-TGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      .+.++++|.|..|++.|.....|..|++. | .++++|.|+.|++.|.....|..|++.||+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            34568899999999999999999999998 7 588999999999999999999999999985

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.6e-14  Score=89.85  Aligned_cols=49  Identities=31%  Similarity=0.727  Sum_probs=26.1

Q ss_pred             ceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHM  263 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~  263 (343)
                      +|.|.+|++.|.....|..|+++|+  ++++|.|+.|++.|.+...|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT--NEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT--SSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555553  445555555555555555555554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.3e-13  Score=92.81  Aligned_cols=60  Identities=22%  Similarity=0.477  Sum_probs=55.1

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccC---CCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTG---EKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      +.++++|+|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.....|.+|++.+|..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999986   89999999999999999999999776654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=7.5e-14  Score=92.74  Aligned_cols=57  Identities=33%  Similarity=0.730  Sum_probs=40.7

Q ss_pred             ccCCCceecC--cCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         208 HTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       208 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |.++++|.|+  .|++.|.....|..|+++|.  ++++|.|++||+.|.+...|..|++.|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHT--GQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhC--CCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            5666777775  47777777777777777775  566777777777777777777777665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.4e-13  Score=87.53  Aligned_cols=55  Identities=35%  Similarity=0.760  Sum_probs=51.2

Q ss_pred             CcccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHH-Hhcc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMK-IHDE  144 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~  144 (343)
                      ++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.....|..|++ .|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            479999999999999999999999999999999999999999999999984 5554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=3.5e-13  Score=94.50  Aligned_cols=62  Identities=19%  Similarity=0.320  Sum_probs=55.2

Q ss_pred             CCcccccCcccccCHHHHHHHHHH-ccCCCc--------eecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRS-HTGEKP--------YKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      ..|.|..|++.|.....|..|++. |.++++        |.|.+|++.|.....|..|+++|+  ++++|.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT--GEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH--TCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC--CCCCCCCC
Confidence            457899999999999999999998 888877        899999999999999999999997  78899886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.2e-16  Score=105.15  Aligned_cols=36  Identities=19%  Similarity=0.223  Sum_probs=20.4

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++|.|..|++.|.....|..|+++|+++++|.|.+|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            445555555555555555555555555555555554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.2e-13  Score=89.66  Aligned_cols=62  Identities=31%  Similarity=0.681  Sum_probs=56.4

Q ss_pred             cccCCCCCCccccc--ccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202          82 MSTTSQEEKNKECE--FCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus        82 ~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      ......++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|.+|++.|.
T Consensus        10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34556678999997  599999999999999999999999999999999999999999998773

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.8e-13  Score=87.27  Aligned_cols=53  Identities=15%  Similarity=0.342  Sum_probs=25.9

Q ss_pred             CCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC-CCCCCCCChHHHHHHHhhh
Q psy5202         210 GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR-FCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       210 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~~  266 (343)
                      ++++|.|.+|++.|. ...|..|+++ .  ++++|.|+ .||+.|..+..|..|++.|
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~--~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-C--PRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-C--SSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-c--CCcCccCCcccCcccccHHHHHHHHHhh
Confidence            344455555555555 4555555444 2  44455555 4555555555555555443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.2e-16  Score=102.96  Aligned_cols=58  Identities=26%  Similarity=0.423  Sum_probs=51.4

Q ss_pred             CCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +++|.|.+|++.|.....|..       +++|.|.+|++.|.....|..|+++|+  ++++|.|++|
T Consensus        16 ~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~~~C~~C   73 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES--GKKTSGPSSG   73 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC--CCCCSSCCCC
T ss_pred             CCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc--CCCCCCCCCC
Confidence            378999999999998888776       788999999999999999999999986  7889999988

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=9.7e-13  Score=85.34  Aligned_cols=53  Identities=23%  Similarity=0.542  Sum_probs=50.8

Q ss_pred             CCCcccccCcccccCHHHHHHHHHHccCCCceecC-cCcccccChHHHHHHHHHhc
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE-LCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .++|.|..|++.|. ...|..|+++ ++++||.|. .|++.|.....|..|+++|.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            48899999999999 9999999999 999999999 99999999999999999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=3.6e-12  Score=89.21  Aligned_cols=57  Identities=19%  Similarity=0.373  Sum_probs=52.8

Q ss_pred             CCcccccccccccCChHHHHHHHHh-ccCCCC--------eecCCCCccCCCHHHHHHHHHHhccC
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRN-HTGEKP--------FKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      ...|.|..|++.|.....|.+|++. |.+.++        |.|..|++.|.....|.+|++.|+++
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~   88 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE   88 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCC
Confidence            3458899999999999999999998 888777        99999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.4e-13  Score=78.58  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=38.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA--EEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT--SSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5667888999999999999999999999999886  7888999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.30  E-value=2.3e-12  Score=85.14  Aligned_cols=55  Identities=44%  Similarity=0.883  Sum_probs=33.7

Q ss_pred             CCCCccccc--CcccccCHHHHHHHHHHccCCCceecCc--CcccccChHHHHHHHHHh
Q psy5202         182 SRRNDTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       182 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      ..++|.|..  |++.|.....|..|+++|+++++|+|.+  |++.|.....|.+|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345566665  6666666666666666666666666643  666666666666665543

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.4e-13  Score=79.15  Aligned_cols=45  Identities=31%  Similarity=0.448  Sum_probs=39.7

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHS--CCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778899999999999999999999999999986  7889999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.9e-13  Score=79.27  Aligned_cols=45  Identities=33%  Similarity=0.539  Sum_probs=39.6

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS--GKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGS--SCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc--CCCCCCCCCC
Confidence            36778889999999999999999999999999986  7889999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.30  E-value=7.4e-13  Score=79.14  Aligned_cols=45  Identities=33%  Similarity=0.538  Sum_probs=38.6

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS--SCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778888889999999999999999999998886  7888998887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.30  E-value=6.7e-13  Score=79.35  Aligned_cols=44  Identities=34%  Similarity=0.465  Sum_probs=38.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS--CCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            6778888999999999999999999999999886  7888999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7e-13  Score=79.26  Aligned_cols=45  Identities=33%  Similarity=0.395  Sum_probs=39.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH--CCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778889999999999999999999999999987  7889999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.29  E-value=3.6e-12  Score=84.18  Aligned_cols=57  Identities=28%  Similarity=0.584  Sum_probs=52.4

Q ss_pred             ccCCCceecCc--CcccccChHHHHHHHHHhcCCCCcccccCC--CCCCCCChHHHHHHHhhh
Q psy5202         208 HTGEKPYKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRF--CEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       208 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  266 (343)
                      +...++|.|..  |++.|.....|..|+++|.  ++++|.|.+  |++.|.....|..|++.|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT--GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHS--SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcC--CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678999998  9999999999999999997  889999975  999999999999999875

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.1e-13  Score=79.24  Aligned_cols=45  Identities=27%  Similarity=0.406  Sum_probs=38.4

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC--SSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778888888999999999999999999988886  7888988887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.6e-13  Score=79.35  Aligned_cols=44  Identities=30%  Similarity=0.398  Sum_probs=39.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTS--CSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6778889999999999999999999999999886  7889999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.7e-13  Score=79.34  Aligned_cols=44  Identities=36%  Similarity=0.545  Sum_probs=39.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTC--CCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcC--CCCCCCCCCC
Confidence            6778889999999999999999999999999886  7889999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.7e-13  Score=78.85  Aligned_cols=45  Identities=36%  Similarity=0.461  Sum_probs=38.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT--GERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS--CCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778888889999999999999999999988886  7888988887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.1e-13  Score=79.24  Aligned_cols=45  Identities=36%  Similarity=0.508  Sum_probs=38.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS--CCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC--CCCCCCCCCC
Confidence            36778888899999999999999999999998886  7888999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.8e-13  Score=79.04  Aligned_cols=45  Identities=31%  Similarity=0.495  Sum_probs=39.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT--TSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778888999999999999999999999999886  7888999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.9e-13  Score=78.58  Aligned_cols=45  Identities=33%  Similarity=0.415  Sum_probs=39.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT--KQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS--CCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            47788899999999999999999999999999986  7889999887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.3e-12  Score=79.81  Aligned_cols=46  Identities=24%  Similarity=0.450  Sum_probs=32.1

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHH-HhcCCCCcccccCCCCCCCCC
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMK-THGRLGKDVYRCRFCEMPFSV  255 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~C~~C~~~f~~  255 (343)
                      |.++++|.|.+|++.|.....|.+|++ +|.  ++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~--~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHT--SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSC--CCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcC--CCCCccCCCCCCCCCC
Confidence            556677777777777777777777765 564  6677777777777764

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.4e-13  Score=78.89  Aligned_cols=44  Identities=30%  Similarity=0.406  Sum_probs=38.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM--GEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG--SCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6677888899999999999999999999998886  7888999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.5e-13  Score=79.13  Aligned_cols=45  Identities=36%  Similarity=0.505  Sum_probs=39.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT--GVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGS--CCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778888999999999999999999999999886  7888999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.29  E-value=7.4e-13  Score=79.15  Aligned_cols=45  Identities=29%  Similarity=0.386  Sum_probs=39.3

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS--SSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcC--CCCCcCCCCC
Confidence            36778889999999999999999999999999886  7889999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.9e-13  Score=79.00  Aligned_cols=45  Identities=27%  Similarity=0.409  Sum_probs=39.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF--REKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH--STTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc--CCCCCCCCCC
Confidence            47778899999999999999999999999999987  7889999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.3e-13  Score=78.70  Aligned_cols=45  Identities=31%  Similarity=0.463  Sum_probs=39.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT--GYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHT--CCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778888999999999999999999999999886  7888999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9e-13  Score=78.77  Aligned_cols=45  Identities=36%  Similarity=0.533  Sum_probs=39.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHS--SSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC--CCCCCCCCCC
Confidence            36778888999999999999999999999999886  7889999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.29  E-value=8.4e-13  Score=78.89  Aligned_cols=45  Identities=33%  Similarity=0.485  Sum_probs=39.4

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGG--CCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778889999999999999999999999999986  7889999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-13  Score=78.97  Aligned_cols=45  Identities=33%  Similarity=0.520  Sum_probs=39.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH--CSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778889999999999999999999999999987  7889999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=8.3e-13  Score=78.92  Aligned_cols=44  Identities=34%  Similarity=0.442  Sum_probs=38.9

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT--TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6678889999999999999999999999999886  7889999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=7.7e-13  Score=79.09  Aligned_cols=45  Identities=29%  Similarity=0.408  Sum_probs=39.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT--GVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSS--SCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778899999999999999999999999999986  7889999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.9e-13  Score=78.79  Aligned_cols=45  Identities=31%  Similarity=0.506  Sum_probs=37.9

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT--AEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT--CCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36677888888888888888888888888888886  7888888887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=78.44  Aligned_cols=45  Identities=33%  Similarity=0.536  Sum_probs=39.9

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGC--CCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778899999999999999999999999999986  7889999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8e-13  Score=79.00  Aligned_cols=44  Identities=30%  Similarity=0.428  Sum_probs=38.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT--TCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6677888889999999999999999999988886  7888988887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=78.47  Aligned_cols=45  Identities=31%  Similarity=0.515  Sum_probs=39.6

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS--SCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778899999999999999999999999999886  7889999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=9.8e-13  Score=78.61  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=40.0

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS--GEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGT--SCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778999999999999999999999999999986  7889999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.2e-13  Score=79.19  Aligned_cols=45  Identities=38%  Similarity=0.541  Sum_probs=40.3

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT--GGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH--SCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778999999999999999999999999999997  7889999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.6e-13  Score=78.84  Aligned_cols=44  Identities=36%  Similarity=0.515  Sum_probs=37.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS--GEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC--CSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            6677888888889889988888888888888886  7888888887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9e-13  Score=78.74  Aligned_cols=44  Identities=36%  Similarity=0.496  Sum_probs=37.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT--GQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH--SCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5677888888888888888888888888888886  7788888887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=78.36  Aligned_cols=45  Identities=33%  Similarity=0.515  Sum_probs=40.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGS--CCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            47788999999999999999999999999999996  7899999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.2e-13  Score=78.95  Aligned_cols=45  Identities=36%  Similarity=0.502  Sum_probs=38.9

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTC--CCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36677888999999999999999999999998886  7888999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=8.3e-13  Score=78.91  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTS--CSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778889999999999999999999999998886  7889999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.9e-13  Score=78.59  Aligned_cols=45  Identities=33%  Similarity=0.364  Sum_probs=39.6

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV--DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC--SCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778889999999999999999999999999986  7889999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.2e-12  Score=78.20  Aligned_cols=44  Identities=30%  Similarity=0.470  Sum_probs=38.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS--GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC--CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            5677888889999999999999999999988886  7888999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=78.43  Aligned_cols=45  Identities=33%  Similarity=0.492  Sum_probs=39.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS--SCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778889999999999999999999999999986  7889999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.2e-13  Score=78.72  Aligned_cols=45  Identities=29%  Similarity=0.400  Sum_probs=38.7

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT--GENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT--TSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778888899999999999999999999988886  7888999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.3e-12  Score=78.05  Aligned_cols=44  Identities=23%  Similarity=0.187  Sum_probs=38.4

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM--GQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS--CCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6677888899999999999999999999998886  7888999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=8.9e-13  Score=78.79  Aligned_cols=45  Identities=42%  Similarity=0.603  Sum_probs=38.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT--TCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            36778888888999999999999999999988886  7888888887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.8e-13  Score=78.81  Aligned_cols=44  Identities=36%  Similarity=0.492  Sum_probs=38.2

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT--GERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC--SCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC--CCCCCCCCCC
Confidence            6677888899999999999999999999998886  7888999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.1e-12  Score=78.46  Aligned_cols=45  Identities=24%  Similarity=0.293  Sum_probs=39.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM--GEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTC--CSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            36778888999999999999999999999998886  7888999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=77.98  Aligned_cols=44  Identities=30%  Similarity=0.465  Sum_probs=37.4

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT--GEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH--CCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc--CCCCCCCCCC
Confidence            5667888888888888888888888888888886  7888888887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.26  E-value=1.6e-12  Score=77.63  Aligned_cols=44  Identities=23%  Similarity=0.346  Sum_probs=37.7

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT--REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC--CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5677888888999999999999999999988886  7888888887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=8.3e-13  Score=78.92  Aligned_cols=45  Identities=33%  Similarity=0.493  Sum_probs=40.0

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGS--SCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778899999999999999999999999999986  7889999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=77.63  Aligned_cols=45  Identities=36%  Similarity=0.493  Sum_probs=39.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTT--TSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778889999999999999999999999999886  7889999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.6e-12  Score=76.68  Aligned_cols=44  Identities=32%  Similarity=0.523  Sum_probs=38.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC--CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6677888899999999999999999999998886  7888998875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.2e-12  Score=77.40  Aligned_cols=44  Identities=34%  Similarity=0.498  Sum_probs=38.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHH-HhcCCCCcccccCCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMK-THGRLGKDVYRCRFC  249 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~C~~C  249 (343)
                      |+++|.++++|.|.+|++.|.....|..|++ +|.  ++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~--~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT--GEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT--TSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcC--CCCCCCCCCC
Confidence            6677888889999999999999999999988 886  7888999887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=1.3e-11  Score=76.45  Aligned_cols=47  Identities=34%  Similarity=0.568  Sum_probs=43.5

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHH-hccCCCCeecCCCCccCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRR-NHTGEKPFKCTVCDHACSQ  131 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~  131 (343)
                      .+.++++|.|.+|++.|.....|.+|++ +|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4567889999999999999999999997 8999999999999999976

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.19  E-value=4.3e-13  Score=85.71  Aligned_cols=55  Identities=18%  Similarity=0.407  Sum_probs=45.7

Q ss_pred             HHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHH
Q psy5202         201 LTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLE  260 (343)
Q Consensus       201 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~  260 (343)
                      |..|+++|.++++|.|++|++.|.....|.   ++|.  ++++|.|++||+.|.....+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~--~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDP--MTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEET--TTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcC--CCCCEECCCCCCccccCcccc
Confidence            345788899999999999999999888886   6775  789999999999998766544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.4e-11  Score=73.06  Aligned_cols=42  Identities=24%  Similarity=0.560  Sum_probs=32.0

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCC
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCE  250 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~  250 (343)
                      .|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~--~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD--GSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHS--CCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHcc--CCCCCCCcCCC
Confidence            4667777778778877777777777777775  67777777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.5e-11  Score=74.10  Aligned_cols=42  Identities=24%  Similarity=0.391  Sum_probs=26.1

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCC
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEM  251 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~  251 (343)
                      |.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHS--GEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSC--SCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcC--CCCCccCCCCCC
Confidence            445566666666666666666666666664  556666666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=6.6e-12  Score=73.29  Aligned_cols=42  Identities=29%  Similarity=0.570  Sum_probs=35.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHA--GESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGC--CCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcC--CCCCCCCC
Confidence            5567888888999999999999999999988886  77888884

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=7.7e-12  Score=74.61  Aligned_cols=43  Identities=30%  Similarity=0.474  Sum_probs=36.8

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT--GEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHS--SSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            6778888899999999999999999999998886  788888863

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.17  E-value=7.6e-12  Score=74.63  Aligned_cols=43  Identities=33%  Similarity=0.520  Sum_probs=37.2

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHT--TSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6778888999999999999999999999999886  788898864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=74.69  Aligned_cols=43  Identities=37%  Similarity=0.559  Sum_probs=34.1

Q ss_pred             HHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         205 RRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       205 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      +++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS--SSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            346777888888888888888888888888876  6778888877

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.1e-12  Score=74.29  Aligned_cols=44  Identities=39%  Similarity=0.519  Sum_probs=37.3

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHC--CCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcC--CCCCCCCCC
Confidence            36778888899999999999999999999998886  788888863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=74.08  Aligned_cols=44  Identities=41%  Similarity=0.628  Sum_probs=37.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC--CCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            36778888899999999999999999999998886  788888864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=74.48  Aligned_cols=44  Identities=32%  Similarity=0.452  Sum_probs=37.4

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      .|+++|.++++|+|.+|++.|.....|..|+++|.  ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTS--CCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            36778888899999999999999999999998886  788888863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=74.05  Aligned_cols=43  Identities=33%  Similarity=0.471  Sum_probs=36.9

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR--GEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGC--SCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhC--CCCCCCCCC
Confidence            6778888899999999999999999999998886  788888863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=72.41  Aligned_cols=42  Identities=29%  Similarity=0.506  Sum_probs=33.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT--VKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTS--CCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhC--CCCCCCCC
Confidence            4567888888888888888888888888888886  67888774

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=74.00  Aligned_cols=43  Identities=37%  Similarity=0.572  Sum_probs=37.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHH--SCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            6778888999999999999999999999999887  788898864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.8e-12  Score=74.35  Aligned_cols=43  Identities=40%  Similarity=0.569  Sum_probs=35.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTT--TSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhC--CCCCCCCCC
Confidence            6677888888888888888888888888888886  778888863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.5e-12  Score=74.20  Aligned_cols=42  Identities=33%  Similarity=0.470  Sum_probs=31.7

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      ++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHT--REKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH--HCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            45777777777777777777777777777776  6777777776

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.1e-11  Score=73.90  Aligned_cols=43  Identities=35%  Similarity=0.513  Sum_probs=36.5

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSC--SSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6677888889999999999999999999988886  788888864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=73.81  Aligned_cols=44  Identities=32%  Similarity=0.555  Sum_probs=38.0

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|+  ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT--QETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHS--SCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            36778889999999999999999999999999986  788898863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=74.08  Aligned_cols=44  Identities=39%  Similarity=0.591  Sum_probs=36.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC--CCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            36677888888888888888888888888888886  778888863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=73.75  Aligned_cols=44  Identities=32%  Similarity=0.522  Sum_probs=36.8

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGT--TCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            36777888888999999999999999999988886  788888863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.1e-11  Score=73.86  Aligned_cols=44  Identities=36%  Similarity=0.532  Sum_probs=37.6

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTS--SCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcC--CCCCcCCCC
Confidence            36778888999999999999999999999998886  788898864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=74.08  Aligned_cols=43  Identities=28%  Similarity=0.434  Sum_probs=34.9

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT--GERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTS--CCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6677888888888888888888888888888886  778888863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=73.66  Aligned_cols=42  Identities=29%  Similarity=0.532  Sum_probs=34.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT--GERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCS--SCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC--CCCCCCCC
Confidence            5677888888888888888888888888888886  77888886

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.14  E-value=9.4e-12  Score=74.23  Aligned_cols=38  Identities=37%  Similarity=0.636  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.4e-11  Score=73.43  Aligned_cols=43  Identities=33%  Similarity=0.448  Sum_probs=35.5

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT--SSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            6677888888888888888888888888888886  778888863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=74.05  Aligned_cols=43  Identities=40%  Similarity=0.594  Sum_probs=35.7

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS--GERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTT--SCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcC--CCCCCCCCC
Confidence            5677888888888888888888888888888886  778888863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=73.71  Aligned_cols=44  Identities=32%  Similarity=0.502  Sum_probs=35.7

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT--GENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS--SSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            36677888888888888888888888888888886  778888863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.9e-12  Score=74.13  Aligned_cols=43  Identities=40%  Similarity=0.573  Sum_probs=35.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS--CSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcC--CCCCCCCCC
Confidence            6677888888888888888888888888888886  778888863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.13  E-value=9.5e-12  Score=77.01  Aligned_cols=51  Identities=24%  Similarity=0.283  Sum_probs=42.9

Q ss_pred             cccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccc
Q psy5202         192 GKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVY  244 (343)
Q Consensus       192 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  244 (343)
                      ++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+  ++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRH--FAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHT--TTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhc--cCCCC
Confidence            3567777788888889999999999999999999999999998886  67766

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=73.78  Aligned_cols=38  Identities=32%  Similarity=0.510  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=73.63  Aligned_cols=44  Identities=39%  Similarity=0.579  Sum_probs=37.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTS--SCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            36778888899999999999999999999998886  788888863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=72.44  Aligned_cols=43  Identities=37%  Similarity=0.557  Sum_probs=36.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT--GESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTT--TSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhC--CCCCCCCC
Confidence            36778888889999999999999999999988886  77888884

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=73.59  Aligned_cols=43  Identities=35%  Similarity=0.526  Sum_probs=35.8

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS--SSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            6677888888888888888888888888888886  778888863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=73.34  Aligned_cols=43  Identities=37%  Similarity=0.534  Sum_probs=37.3

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      +|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT--GERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHT--CCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcC--CCCCCCCC
Confidence            36778888999999999999999999999999986  78889886

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=73.21  Aligned_cols=42  Identities=33%  Similarity=0.564  Sum_probs=35.9

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS--GQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSS--SSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcC--CCCCCCCC
Confidence            6778888889999999999999999999988886  77888884

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=73.75  Aligned_cols=42  Identities=40%  Similarity=0.565  Sum_probs=35.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT--GEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTC--CSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhC--CCCCCCCC
Confidence            6677888888888888888888888888888886  77888886

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=73.48  Aligned_cols=37  Identities=35%  Similarity=0.504  Sum_probs=35.5

Q ss_pred             CCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      +++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4889999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=73.02  Aligned_cols=38  Identities=34%  Similarity=0.547  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=74.04  Aligned_cols=38  Identities=34%  Similarity=0.663  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.1e-11  Score=73.92  Aligned_cols=38  Identities=34%  Similarity=0.560  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=4.8e-11  Score=71.78  Aligned_cols=43  Identities=33%  Similarity=0.668  Sum_probs=39.7

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCc
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDH  127 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~  127 (343)
                      .+..+++|.|.+|++.|.....|.+|+++|.++++|.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3456789999999999999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=72.70  Aligned_cols=42  Identities=36%  Similarity=0.489  Sum_probs=34.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT--GESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTC--CSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcC--CCCCCCCC
Confidence            6677888888888888888888888888888886  77788874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.11  E-value=1.6e-11  Score=73.16  Aligned_cols=38  Identities=39%  Similarity=0.558  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=1.1e-11  Score=73.94  Aligned_cols=38  Identities=29%  Similarity=0.509  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|+.|++.|.....|..|+++|.++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34889999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.11  E-value=1.1e-11  Score=73.84  Aligned_cols=38  Identities=39%  Similarity=0.656  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|+.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.2e-11  Score=73.79  Aligned_cols=38  Identities=45%  Similarity=0.646  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|..|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.9e-11  Score=72.11  Aligned_cols=43  Identities=30%  Similarity=0.492  Sum_probs=36.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      +|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA--RKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCC--CCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcC--CCCCCCCC
Confidence            36778888899999999999999999999998886  78888884

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.6e-11  Score=73.24  Aligned_cols=38  Identities=42%  Similarity=0.656  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=72.67  Aligned_cols=38  Identities=34%  Similarity=0.506  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2e-11  Score=71.95  Aligned_cols=43  Identities=26%  Similarity=0.350  Sum_probs=37.1

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHA--AKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGC--CCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCcCCC
Confidence            36778888999999999999999999999999886  78888884

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=73.03  Aligned_cols=38  Identities=39%  Similarity=0.608  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.5e-11  Score=73.31  Aligned_cols=43  Identities=26%  Similarity=0.269  Sum_probs=36.7

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCC-CcccccCC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLG-KDVYRCRF  248 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~~~~C~~  248 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  + +++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHT--RGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCC--SCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            6677888899999999999999999999998886  7 78888863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.5e-11  Score=71.73  Aligned_cols=41  Identities=37%  Similarity=0.578  Sum_probs=34.6

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT--GSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHH--SCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcC--CCCCCCC
Confidence            5667888888888888888888888888888886  7788877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-11  Score=73.71  Aligned_cols=38  Identities=39%  Similarity=0.620  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=1e-11  Score=74.11  Aligned_cols=38  Identities=39%  Similarity=0.527  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1e-11  Score=74.05  Aligned_cols=38  Identities=39%  Similarity=0.607  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=72.92  Aligned_cols=38  Identities=39%  Similarity=0.584  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=73.20  Aligned_cols=38  Identities=42%  Similarity=0.670  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=73.11  Aligned_cols=42  Identities=26%  Similarity=0.533  Sum_probs=35.7

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS--REKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH--HTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC--CCCCCCCC
Confidence            6677888888888888888888888888888886  77888886

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.6e-11  Score=73.22  Aligned_cols=38  Identities=37%  Similarity=0.614  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=72.63  Aligned_cols=38  Identities=34%  Similarity=0.591  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=72.66  Aligned_cols=38  Identities=37%  Similarity=0.609  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44899999999999999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.10  E-value=2.4e-11  Score=70.84  Aligned_cols=41  Identities=24%  Similarity=0.409  Sum_probs=33.4

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~--~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS--QSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTT--CCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcC--CCCCCCC
Confidence            4567888888888888888888888888888886  7788877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.4e-11  Score=72.44  Aligned_cols=37  Identities=38%  Similarity=0.694  Sum_probs=35.6

Q ss_pred             CCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      +++|.|++|++.|.....|..|+++|.++++|+|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4889999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2e-11  Score=72.72  Aligned_cols=38  Identities=34%  Similarity=0.514  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44899999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=8.2e-11  Score=69.66  Aligned_cols=42  Identities=29%  Similarity=0.476  Sum_probs=39.2

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCD  126 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  126 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            456788999999999999999999999999999999999996

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.3e-11  Score=72.50  Aligned_cols=38  Identities=39%  Similarity=0.654  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-11  Score=71.44  Aligned_cols=41  Identities=32%  Similarity=0.599  Sum_probs=33.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT--GSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTS--CCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcC--CCCCCCC
Confidence            5567888888888888888888888888888886  7778877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.2e-11  Score=72.62  Aligned_cols=38  Identities=39%  Similarity=0.637  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=72.92  Aligned_cols=38  Identities=39%  Similarity=0.613  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.1e-11  Score=72.66  Aligned_cols=42  Identities=36%  Similarity=0.670  Sum_probs=34.1

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS--GEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC--CSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC--CCCCCCCC
Confidence            4567888888888888888888888888888886  77888885

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.9e-11  Score=72.84  Aligned_cols=38  Identities=37%  Similarity=0.505  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.1e-11  Score=70.63  Aligned_cols=40  Identities=33%  Similarity=0.475  Sum_probs=24.1

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      +.++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445566666666666666666666666666666666555

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2e-11  Score=72.71  Aligned_cols=43  Identities=40%  Similarity=0.561  Sum_probs=36.2

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT--GKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSC--CCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhC--CCCCCCCC
Confidence            36677888888999999999999899999988886  77888886

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.4e-11  Score=73.47  Aligned_cols=38  Identities=37%  Similarity=0.563  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|++|++.|.....|..|+++|+++++|+|..|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.4e-11  Score=71.86  Aligned_cols=41  Identities=34%  Similarity=0.633  Sum_probs=33.9

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT--GSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTS--CCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhC--CCCCCCC
Confidence            5677888888888888888888888888888886  7788877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3e-11  Score=72.01  Aligned_cols=38  Identities=39%  Similarity=0.548  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44899999999999999999999999999999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.8e-11  Score=72.97  Aligned_cols=43  Identities=30%  Similarity=0.530  Sum_probs=37.5

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      .|+++|.++++|.|.+|++.|.....|.+|+++|.  ++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE--RTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHH--HSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhC--CCCCCCCC
Confidence            36778889999999999999999999999999987  78889885

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.9e-11  Score=72.05  Aligned_cols=38  Identities=24%  Similarity=0.433  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.9e-11  Score=71.04  Aligned_cols=39  Identities=38%  Similarity=0.611  Sum_probs=21.0

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            8 TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555555555555555555555555555555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.4e-11  Score=72.42  Aligned_cols=38  Identities=29%  Similarity=0.428  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34889999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.07  E-value=2.3e-11  Score=72.48  Aligned_cols=38  Identities=37%  Similarity=0.589  Sum_probs=36.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34899999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.6e-11  Score=72.24  Aligned_cols=37  Identities=43%  Similarity=0.636  Sum_probs=35.6

Q ss_pred             CCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         183 RRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       183 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      +++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4889999999999999999999999999999999988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.5e-11  Score=70.92  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=32.3

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHA--GESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHT--TSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHC--CCCCCCCC
Confidence            4566777788888888888888888888888875  67777774

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=71.04  Aligned_cols=39  Identities=36%  Similarity=0.504  Sum_probs=20.1

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            8 TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.5e-11  Score=72.34  Aligned_cols=38  Identities=39%  Similarity=0.629  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44899999999999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2e-11  Score=72.79  Aligned_cols=38  Identities=39%  Similarity=0.627  Sum_probs=35.6

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.2e-11  Score=70.91  Aligned_cols=38  Identities=29%  Similarity=0.420  Sum_probs=18.4

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|+.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=70.84  Aligned_cols=39  Identities=36%  Similarity=0.585  Sum_probs=20.0

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            8 TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            344455555555555555555555555555555555444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=70.67  Aligned_cols=40  Identities=33%  Similarity=0.531  Sum_probs=26.0

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      +.++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455666666666666666666666666666666666665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.5e-11  Score=71.59  Aligned_cols=43  Identities=33%  Similarity=0.400  Sum_probs=36.9

Q ss_pred             HHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         203 VHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT--RKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC--CCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhC--CCCCCCCC
Confidence            36778889999999999999999999999999986  78888884

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-11  Score=73.91  Aligned_cols=38  Identities=37%  Similarity=0.576  Sum_probs=36.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34899999999999999999999999999999999998

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6e-12  Score=83.47  Aligned_cols=66  Identities=18%  Similarity=0.253  Sum_probs=52.7

Q ss_pred             HHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         200 NLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       200 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      .|..|++.|.++++|.|..|++.|. ...|..|+ .|.  ++++|.|+.|++.|. ...|..|++.|....
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c--~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC--GARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH--HHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc--CCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4566777788888888888888884 88888888 665  788888888888876 488888888876543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.7e-11  Score=69.98  Aligned_cols=41  Identities=37%  Similarity=0.526  Sum_probs=34.8

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA--GVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGS--SCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhc--CCCCCCC
Confidence            6777888888999889988988888888988886  7788876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5e-11  Score=70.99  Aligned_cols=39  Identities=41%  Similarity=0.617  Sum_probs=21.6

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            8 TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.6e-11  Score=71.49  Aligned_cols=43  Identities=33%  Similarity=0.571  Sum_probs=34.2

Q ss_pred             HHHccCCCceecC--cCcccccChHHHHHHHHHhcCCCCcccccCCC
Q psy5202         205 RRSHTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDVYRCRFC  249 (343)
Q Consensus       205 ~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C  249 (343)
                      .++|.++++|+|.  .|++.|.....|.+|+++|.  ++++|.|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS--GVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC--CCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            4567788888887  78888888888888888876  6788888877

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.9e-11  Score=69.87  Aligned_cols=40  Identities=38%  Similarity=0.487  Sum_probs=27.1

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      +.++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4456667777777777777777777777766666776665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=1.5e-10  Score=67.73  Aligned_cols=39  Identities=15%  Similarity=0.342  Sum_probs=28.2

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      +|.++++|.|..|++.|.....|.+|+++|.  ++++|.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTH--SDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT--CTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhC--CCCCccCC
Confidence            4667777777777777777777777777775  66777775

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.02  E-value=2.2e-10  Score=68.12  Aligned_cols=41  Identities=29%  Similarity=0.392  Sum_probs=37.7

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.7e-11  Score=71.07  Aligned_cols=38  Identities=37%  Similarity=0.550  Sum_probs=35.9

Q ss_pred             CCCCcccccCcccccCHHHHHHHHH-HccCCCceecCcC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRR-SHTGEKPYKCELC  219 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  219 (343)
                      ++++|.|.+|++.|.....|..|++ +|.++++|+|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3489999999999999999999999 9999999999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=69.27  Aligned_cols=40  Identities=25%  Similarity=0.389  Sum_probs=29.6

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      ++|.++++|+|.+|++.|.....|..|+++|.  ++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHT--GEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS--SCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC--CCCCCCCC
Confidence            45677777777777777777777777777775  67777775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.4e-11  Score=70.14  Aligned_cols=40  Identities=28%  Similarity=0.556  Sum_probs=30.8

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccC
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCR  247 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~  247 (343)
                      ++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT--GEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTS--SCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhC--CCCCCCCC
Confidence            45777788888888888888888888887775  67778775

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=68.12  Aligned_cols=41  Identities=34%  Similarity=0.597  Sum_probs=37.7

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .+.++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            35678899999999999999999999999999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.5e-10  Score=67.87  Aligned_cols=41  Identities=39%  Similarity=0.711  Sum_probs=38.2

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .+.++++|.|.+|++.|.....|.+|+++|.++++|.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.6e-10  Score=68.74  Aligned_cols=40  Identities=40%  Similarity=0.590  Sum_probs=23.2

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445556666666666666666666666655556665543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=68.37  Aligned_cols=41  Identities=34%  Similarity=0.480  Sum_probs=38.0

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999988

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2.3e-10  Score=66.12  Aligned_cols=38  Identities=26%  Similarity=0.521  Sum_probs=29.0

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      +|.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHT--GSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCC--CCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhC--CCCCcCC
Confidence            4677777888888888888888888877775  6777776

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.97  E-value=1.2e-11  Score=78.86  Aligned_cols=45  Identities=13%  Similarity=0.387  Sum_probs=39.8

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHH
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKL  229 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  229 (343)
                      ++++|.|+.|++.|.....|.   ++|.++++|+|.+|++.|.....+
T Consensus        11 ~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A           11 NRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             CCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            448999999999999988886   789999999999999999876654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.7e-10  Score=68.65  Aligned_cols=37  Identities=51%  Similarity=0.744  Sum_probs=34.5

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.95  E-value=1.8e-10  Score=67.05  Aligned_cols=36  Identities=31%  Similarity=0.563  Sum_probs=33.7

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            348899999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=68.85  Aligned_cols=37  Identities=41%  Similarity=0.627  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3488999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=66.24  Aligned_cols=36  Identities=19%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|.
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            348899999999999999999999999999999984

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=68.98  Aligned_cols=37  Identities=41%  Similarity=0.666  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=68.27  Aligned_cols=37  Identities=43%  Similarity=0.666  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|.|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=68.17  Aligned_cols=37  Identities=38%  Similarity=0.670  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3488999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-10  Score=68.66  Aligned_cols=37  Identities=43%  Similarity=0.661  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|+++++|.|..
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.9e-10  Score=68.38  Aligned_cols=37  Identities=43%  Similarity=0.691  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.92  E-value=2.5e-10  Score=70.46  Aligned_cols=50  Identities=22%  Similarity=0.406  Sum_probs=44.8

Q ss_pred             ccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccCCC
Q psy5202          98 GKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDEDGD  147 (343)
Q Consensus        98 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  147 (343)
                      ++.|.....|..|+++|.++++|.|..|++.|.....|..|++.|.++++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            46688888899999999999999999999999999999999999988743

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.2e-10  Score=68.14  Aligned_cols=37  Identities=43%  Similarity=0.671  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|.+++||.|.+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.92  E-value=4.4e-10  Score=66.76  Aligned_cols=36  Identities=47%  Similarity=0.738  Sum_probs=17.7

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      ++++|.|.+|++.|.....|.+|+++|.++++|.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344455555555555555555555555444444443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.2e-10  Score=67.41  Aligned_cols=36  Identities=31%  Similarity=0.574  Sum_probs=33.9

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            348999999999999999999999999999999996

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.6e-10  Score=67.82  Aligned_cols=37  Identities=41%  Similarity=0.674  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3488999999999999999999999999999999964

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.7e-10  Score=67.73  Aligned_cols=37  Identities=41%  Similarity=0.727  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3488999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.3e-10  Score=68.01  Aligned_cols=37  Identities=43%  Similarity=0.647  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3489999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.6e-10  Score=67.82  Aligned_cols=37  Identities=43%  Similarity=0.681  Sum_probs=34.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecCc
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCEL  218 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  218 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3489999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=1.3e-09  Score=63.70  Aligned_cols=40  Identities=20%  Similarity=0.250  Sum_probs=35.4

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            3556789999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.6e-10  Score=66.31  Aligned_cols=36  Identities=39%  Similarity=0.716  Sum_probs=18.4

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            444555555555555555555555555555555543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.6e-10  Score=66.29  Aligned_cols=36  Identities=33%  Similarity=0.737  Sum_probs=17.6

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE   38 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSC
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCC
Confidence            344444445555555555555555555555544443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.7e-10  Score=66.27  Aligned_cols=37  Identities=41%  Similarity=0.706  Sum_probs=19.4

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .++++|.|.+|++.|.....|.+|+++|.++++|.|+
T Consensus         8 ~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            8 TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.3e-10  Score=66.61  Aligned_cols=36  Identities=36%  Similarity=0.632  Sum_probs=33.7

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            348899999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=66.87  Aligned_cols=37  Identities=35%  Similarity=0.503  Sum_probs=18.8

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            8 TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444555555555555555555555555555555543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=66.11  Aligned_cols=37  Identities=43%  Similarity=0.666  Sum_probs=20.1

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            8 TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.7e-10  Score=65.68  Aligned_cols=38  Identities=37%  Similarity=0.583  Sum_probs=22.1

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34455566666666666666666666666555555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-10  Score=77.34  Aligned_cols=51  Identities=22%  Similarity=0.411  Sum_probs=30.6

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +++.|..|++.|. ...|..|+ .|.++++|.|+.|++.|. ...|..|+++|.
T Consensus        16 r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A           16 RLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             cccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            5556666666663 55666666 566666666666666555 366666666654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.1e-10  Score=66.50  Aligned_cols=36  Identities=33%  Similarity=0.667  Sum_probs=19.0

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE   38 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCC
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCC
Confidence            444455555555555555555555555555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.7e-10  Score=64.73  Aligned_cols=36  Identities=31%  Similarity=0.661  Sum_probs=17.7

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+++|.++++|.|++|++.|.....|..|++.|.++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGE   38 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTS
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCC
Confidence            344444445555555555555555555555544443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.6e-09  Score=63.89  Aligned_cols=40  Identities=38%  Similarity=0.625  Sum_probs=36.1

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4567889999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.5e-09  Score=62.60  Aligned_cols=38  Identities=37%  Similarity=0.651  Sum_probs=33.7

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeec
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC  122 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  122 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45678899999999999999999999999999999887

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.8e-10  Score=65.91  Aligned_cols=37  Identities=43%  Similarity=0.672  Sum_probs=21.6

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            8 TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3455566666666666666666666555555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=6e-10  Score=64.71  Aligned_cols=35  Identities=31%  Similarity=0.528  Sum_probs=33.1

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceec
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC  216 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  216 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|+|
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34889999999999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.8e-10  Score=65.44  Aligned_cols=36  Identities=28%  Similarity=0.760  Sum_probs=18.8

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+++|.++++|.|.+|++.|.....|..|++.|.++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSRE   38 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHT
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence            344455555555555555555555555555555444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.2e-10  Score=66.66  Aligned_cols=35  Identities=37%  Similarity=0.676  Sum_probs=33.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceec
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC  216 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  216 (343)
                      ++++|.|+.|++.|.....|..|+++|+++++|.|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34899999999999999999999999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=64.24  Aligned_cols=40  Identities=33%  Similarity=0.648  Sum_probs=34.5

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|.+|+++|.++++|.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4567788999999999999999999999999999998874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4.7e-10  Score=65.92  Aligned_cols=36  Identities=19%  Similarity=0.421  Sum_probs=33.6

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|..|++.|.....|..|+++|.++++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            348899999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.2e-09  Score=63.64  Aligned_cols=40  Identities=38%  Similarity=0.628  Sum_probs=34.9

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1e-09  Score=64.49  Aligned_cols=36  Identities=25%  Similarity=0.415  Sum_probs=18.4

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeec
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC  122 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  122 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            8 AGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            344455555555555555555555555555555544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=4.5e-10  Score=65.26  Aligned_cols=35  Identities=34%  Similarity=0.668  Sum_probs=33.0

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceec
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKC  216 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  216 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|+|
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34899999999999999999999999999999988

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.7e-09  Score=63.89  Aligned_cols=41  Identities=34%  Similarity=0.563  Sum_probs=37.8

Q ss_pred             CCCCCCccccc--ccccccCChHHHHHHHHhccCCCCeecCCC
Q psy5202          85 TSQEEKNKECE--FCGKKFKYENTLQAHRRNHTGEKPFKCTVC  125 (343)
Q Consensus        85 ~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  125 (343)
                      .+.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899998  899999999999999999999999999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1e-09  Score=63.66  Aligned_cols=36  Identities=39%  Similarity=0.571  Sum_probs=18.4

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCCCCeec
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC  122 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  122 (343)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            7 GGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344455555555555555555555555555555544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1e-09  Score=65.11  Aligned_cols=36  Identities=39%  Similarity=0.685  Sum_probs=21.3

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+++|.++++|.|.+|++.|.....|.+|++.|.++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT   38 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCC
Confidence            445555556666666666666666666666665554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3e-09  Score=62.38  Aligned_cols=39  Identities=28%  Similarity=0.538  Sum_probs=32.0

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            345678888888888888888888888888888888874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.9e-09  Score=63.13  Aligned_cols=40  Identities=38%  Similarity=0.654  Sum_probs=34.6

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3556788999999999999999999999999999999863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.81  E-value=3.2e-09  Score=60.42  Aligned_cols=37  Identities=19%  Similarity=0.352  Sum_probs=24.9

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhcCCCCccccc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRC  246 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C  246 (343)
                      |.++++|.|.+|++.|.....|..|+++|.  ++++|.|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHR--RDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTC--CSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcC--CCcccee
Confidence            456677777777777777777777777775  5666654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=4.2e-09  Score=61.74  Aligned_cols=39  Identities=28%  Similarity=0.510  Sum_probs=32.3

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345677888888888888888888888888888888884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.4e-09  Score=63.91  Aligned_cols=36  Identities=33%  Similarity=0.490  Sum_probs=33.4

Q ss_pred             CCCCcccccCcccccCHHHHHHHHHHccCCCceecC
Q psy5202         182 SRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       182 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            348999999999999999999999999999999873

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.8e-09  Score=62.60  Aligned_cols=39  Identities=33%  Similarity=0.427  Sum_probs=33.1

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccC-CCCeecCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTG-EKPFKCTV  124 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~~  124 (343)
                      +.++++|.|.+|++.|.....|..|+++|.+ +++|.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567889999999999999999999988888 88888864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.1e-09  Score=62.00  Aligned_cols=40  Identities=38%  Similarity=0.645  Sum_probs=33.0

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3456788889889998988888888988888888888863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.75  E-value=2.7e-09  Score=59.94  Aligned_cols=34  Identities=35%  Similarity=0.627  Sum_probs=18.8

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+++|.++++|+|..|++.|.....|..|+++|.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            3445555555555555555555555555555553

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.4e-09  Score=59.03  Aligned_cols=31  Identities=23%  Similarity=0.574  Sum_probs=21.4

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +|.++++|.|.+|++.|.....|..|+++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            4666677777777777777777777776665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.72  E-value=9.4e-09  Score=64.72  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=19.8

Q ss_pred             cCCCceecCc--CcccccChHHHHHHH-HHhcCCCCcccccC
Q psy5202         209 TGEKPYKCEL--CSYACAQSSKLTRHM-KTHGRLGKDVYRCR  247 (343)
Q Consensus       209 ~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~~~C~  247 (343)
                      .+++||+|.+  |+++|.....|.+|+ ++|+  +++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT--gEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK--SDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS--SCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCC--CCCCcccc
Confidence            4555555543  555555555555554 3453  55555553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.8e-09  Score=61.49  Aligned_cols=38  Identities=26%  Similarity=0.423  Sum_probs=30.3

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCT  123 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  123 (343)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45667888888888888888888888888888888774

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=2.6e-09  Score=72.87  Aligned_cols=58  Identities=17%  Similarity=0.257  Sum_probs=42.1

Q ss_pred             HHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         205 RRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       205 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      .++|.++++|.|.+|++.|.....|..|+++|.  ++++|.|..|.+    ...|..|++.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht--~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN--EEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH--HHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC--CCCCcccchhhh----HHHHHhhhccccc
Confidence            445778888888888888888888888888886  678888876553    4445556655543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.68  E-value=1.4e-08  Score=56.09  Aligned_cols=30  Identities=27%  Similarity=0.545  Sum_probs=19.9

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|..|+++|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            556666666666666666666666666664

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=3.1e-08  Score=62.39  Aligned_cols=41  Identities=20%  Similarity=0.262  Sum_probs=35.9

Q ss_pred             cCCCCCCcccccc--cccccCChHHHHHHH-HhccCCCCeecCC
Q psy5202          84 TTSQEEKNKECEF--CGKKFKYENTLQAHR-RNHTGEKPFKCTV  124 (343)
Q Consensus        84 ~~~~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C~~  124 (343)
                      ....+++||+|.+  |++.|.....|.+|+ ++|.+++||.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4557889999976  999999999999997 6899999999864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.66  E-value=1.5e-08  Score=55.91  Aligned_cols=30  Identities=30%  Similarity=0.776  Sum_probs=20.1

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|.+|+++|+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            556666666666666666666666666664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=1.4e-08  Score=57.67  Aligned_cols=35  Identities=20%  Similarity=0.490  Sum_probs=28.1

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeec
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKC  122 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  122 (343)
                      ++++|.|.+|++.|.....|..|+++|.++++|.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            46778888888888888888888888888877765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.63  E-value=9.8e-09  Score=57.56  Aligned_cols=35  Identities=43%  Similarity=0.657  Sum_probs=24.3

Q ss_pred             HHHhccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       110 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      |++.|.++++|.|+.|++.|.....|..|++.|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45666677777777777777777777777766654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.63  E-value=2.5e-08  Score=54.24  Aligned_cols=29  Identities=24%  Similarity=0.249  Sum_probs=14.5

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCCce
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEKPY  214 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  214 (343)
                      |.|..|++.|.....|..|+++|+++++|
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            44555555555555555555555544444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.63  E-value=2.5e-08  Score=54.29  Aligned_cols=32  Identities=22%  Similarity=0.388  Sum_probs=24.6

Q ss_pred             CceecCcCcccccChHHHHHHHHHhcCCCCcccc
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYR  245 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  245 (343)
                      +||.|.+|++.|.....|..|+++|.  ++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE--LLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT--TTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC--CCCCCC
Confidence            46788888888888888888888876  666664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=3.2e-08  Score=55.47  Aligned_cols=30  Identities=30%  Similarity=0.573  Sum_probs=18.2

Q ss_pred             ccCCCceecCc--CcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCEL--CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  237 (343)
                      +++++||+|.+  |++.|.....|.+|+++|+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            44566666654  6666666666666666664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=4e-10  Score=76.94  Aligned_cols=49  Identities=18%  Similarity=0.294  Sum_probs=26.2

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|..|++.|.....|..|+++|+++++|+|..|.    ....|..|.+.|
T Consensus        24 kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~   72 (88)
T 1x6f_A           24 STYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYA   72 (88)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCC
T ss_pred             CCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccc
Confidence            4555555555565555566665555555566554433    233344444444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.56  E-value=3.9e-08  Score=54.24  Aligned_cols=25  Identities=24%  Similarity=0.414  Sum_probs=14.7

Q ss_pred             cCCCceecCcCcccccChHHHHHHH
Q psy5202         209 TGEKPYKCELCSYACAQSSKLTRHM  233 (343)
Q Consensus       209 ~~~~~~~C~~C~~~f~~~~~L~~H~  233 (343)
                      .+++||.|..|+++|...+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4555666666666666666666555

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.4e-08  Score=55.26  Aligned_cols=33  Identities=21%  Similarity=0.624  Sum_probs=18.5

Q ss_pred             hccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         113 NHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       113 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      .|.++++|.|..|++.|.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            345555555555555555555555555555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=6.3e-08  Score=54.50  Aligned_cols=35  Identities=20%  Similarity=0.423  Sum_probs=22.9

Q ss_pred             ccCCCceecC--cCcccccChHHHHHHHHHhcCCCCccc
Q psy5202         208 HTGEKPYKCE--LCSYACAQSSKLTRHMKTHGRLGKDVY  244 (343)
Q Consensus       208 h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~  244 (343)
                      |.++++|.|.  .|++.|.....|.+|+++|.  ++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE--MTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH--TTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC--CCCCC
Confidence            4566677776  47777777777777777765  45544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.3e-08  Score=54.82  Aligned_cols=31  Identities=29%  Similarity=0.612  Sum_probs=21.8

Q ss_pred             HccCCCceecCcCcccccCh-HHHHHHHHHhc
Q psy5202         207 SHTGEKPYKCELCSYACAQS-SKLTRHMKTHG  237 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~  237 (343)
                      +|.++++|.|.+|++.|... ..|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            46667777777777777776 77777777765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=3e-08  Score=55.55  Aligned_cols=31  Identities=29%  Similarity=0.635  Sum_probs=21.2

Q ss_pred             HccCCCceecCcCcccccChHHHHHH-HHHhc
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRH-MKTHG  237 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~  237 (343)
                      +|.+++||+|..|++.|.....|..| ++.|.
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            46666777777777777777777777 66664

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=8.8e-08  Score=53.09  Aligned_cols=30  Identities=43%  Similarity=0.848  Sum_probs=19.6

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|..|+++|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            556666666666666666666666666664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=9.3e-08  Score=53.03  Aligned_cols=30  Identities=43%  Similarity=0.882  Sum_probs=19.3

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|+|.+|++.|.....|..|+++|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            556666666666666666666666666664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.50  E-value=1e-07  Score=52.40  Aligned_cols=31  Identities=19%  Similarity=0.506  Sum_probs=16.5

Q ss_pred             ccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       114 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      |.++++|.|..|++.|.....|..|++.|++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            3445555555555555555555555555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.50  E-value=9.4e-08  Score=52.62  Aligned_cols=31  Identities=19%  Similarity=0.342  Sum_probs=17.8

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEK  118 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  118 (343)
                      ++++|.|.+|++.|.....|..|++.|.+++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4455666666666666666666665555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=8.8e-08  Score=53.13  Aligned_cols=30  Identities=27%  Similarity=0.547  Sum_probs=18.5

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|..|+++|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            455566666666666666666666666654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.4e-07  Score=52.21  Aligned_cols=30  Identities=20%  Similarity=0.387  Sum_probs=15.3

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|..|+++|.
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            344455555555555555555555555543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.6e-07  Score=52.00  Aligned_cols=30  Identities=23%  Similarity=0.516  Sum_probs=17.5

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+|++.|.....|..|+++|.
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            445555666666666666666666665554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.45  E-value=9.7e-08  Score=56.92  Aligned_cols=30  Identities=27%  Similarity=0.640  Sum_probs=18.2

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHH-Hhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMK-THG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~  237 (343)
                      |+++++|.|.+|++.|.....|..|++ +|.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            555666666666666666666666665 554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.8e-07  Score=52.32  Aligned_cols=29  Identities=28%  Similarity=0.329  Sum_probs=15.3

Q ss_pred             CCCcccccc--cccccCChHHHHHHHHhccC
Q psy5202          88 EEKNKECEF--CGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        88 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  116 (343)
                      +++||+|.+  |++.|.....|.+|+++|.+
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            445555543  55555555555555555544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.42  E-value=1e-07  Score=52.54  Aligned_cols=32  Identities=28%  Similarity=0.523  Sum_probs=25.9

Q ss_pred             CCCCCcccccccccccCChHHHHHHHHhccCCCCeecCC
Q psy5202          86 SQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTV  124 (343)
Q Consensus        86 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  124 (343)
                      ..+++||+|.+|++.|.....|.+|+       +|.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            35678899999999999999999998       566654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=4.6e-07  Score=57.57  Aligned_cols=29  Identities=24%  Similarity=0.532  Sum_probs=15.3

Q ss_pred             cCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         209 TGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       209 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .+++||+|.+|++.|.....|.+|+++|+
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            34455555555555555555555555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=3e-07  Score=50.87  Aligned_cols=30  Identities=33%  Similarity=0.691  Sum_probs=15.0

Q ss_pred             ccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202         114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       114 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.++++|.|.+|++.|.....|..|++.|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            344445555555555555555555555444

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.8e-07  Score=51.02  Aligned_cols=30  Identities=40%  Similarity=0.815  Sum_probs=14.8

Q ss_pred             ccCCCCeecCCCCccCCCHHHHHHHHHHhc
Q psy5202         114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       114 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.++++|.|.+|++.|.....|..|++.|.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            344444555555555555555555554444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.2e-07  Score=53.03  Aligned_cols=31  Identities=19%  Similarity=0.472  Sum_probs=17.1

Q ss_pred             hccCCCCeecCCCCccCCCHHHHHHH-HHHhc
Q psy5202         113 NHTGEKPFKCTVCDHACSQSAKLKKH-MKIHD  143 (343)
Q Consensus       113 ~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~  143 (343)
                      +|.++++|.|..|++.|.....|..| ++.|.
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            34555555555555555555555555 45444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.2e-07  Score=51.82  Aligned_cols=32  Identities=22%  Similarity=0.572  Sum_probs=19.4

Q ss_pred             hccCCCCeecCCCCccCCCH-HHHHHHHHHhcc
Q psy5202         113 NHTGEKPFKCTVCDHACSQS-AKLKKHMKIHDE  144 (343)
Q Consensus       113 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~  144 (343)
                      +|.++++|.|+.|++.|... ..|..|++.|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            35555666666666666666 666666666554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.8e-07  Score=50.99  Aligned_cols=31  Identities=26%  Similarity=0.412  Sum_probs=18.7

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhccCC
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      .++++|.|.+|++.|.....|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3455666666666666666666666666543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=2.9e-07  Score=47.19  Aligned_cols=25  Identities=40%  Similarity=0.915  Sum_probs=12.4

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555554444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=4.4e-07  Score=50.16  Aligned_cols=29  Identities=45%  Similarity=0.835  Sum_probs=14.0

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ++++|.|.+|++.|.....|..|+++|.+
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            34444555555555544445555444443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=3.8e-07  Score=50.86  Aligned_cols=30  Identities=23%  Similarity=0.480  Sum_probs=17.5

Q ss_pred             ccCCCceecCc--CcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCEL--CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.++++|.|.+  |++.|.....|.+|+++|.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            44555666653  6666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=2.2e-07  Score=47.70  Aligned_cols=25  Identities=36%  Similarity=0.979  Sum_probs=12.0

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3444555555555444454444443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=3.3e-07  Score=51.43  Aligned_cols=33  Identities=30%  Similarity=0.626  Sum_probs=21.0

Q ss_pred             CCCccccc--ccccccCChHHHHHHHHhccCCCCe
Q psy5202          88 EEKNKECE--FCGKKFKYENTLQAHRRNHTGEKPF  120 (343)
Q Consensus        88 ~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~  120 (343)
                      ++++|.|.  .|++.|.....|.+|+++|.++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            45566666  3666666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=6.2e-07  Score=49.54  Aligned_cols=29  Identities=48%  Similarity=0.838  Sum_probs=15.5

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      .+++|.|.+|++.|.....|..|+++|.+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            34555555555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=7.1e-08  Score=57.24  Aligned_cols=34  Identities=18%  Similarity=0.381  Sum_probs=24.2

Q ss_pred             HHHHccCCCceecC--cCcccccChHHHHHHHHHhc
Q psy5202         204 HRRSHTGEKPYKCE--LCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       204 H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |...|.++++|.|.  .|++.|.....|.+|+++|.
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            34457777777774  57777777777777777775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.4e-07  Score=47.66  Aligned_cols=28  Identities=25%  Similarity=0.673  Sum_probs=17.4

Q ss_pred             CcccccccccccCChHHHHHHHHhccCC
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666666543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.27  E-value=3e-08  Score=53.51  Aligned_cols=31  Identities=19%  Similarity=0.296  Sum_probs=25.6

Q ss_pred             CcccccccccccCChHHHHHHHHhccCCCCe
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGEKPF  120 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  120 (343)
                      ++|.|.+|++.|.....|..|+++|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4688888888888888888888888887765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.26  E-value=4.7e-07  Score=53.85  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=23.4

Q ss_pred             hccCCCCeecCCCCccCCCHHHHHHHHH-HhccC
Q psy5202         113 NHTGEKPFKCTVCDHACSQSAKLKKHMK-IHDED  145 (343)
Q Consensus       113 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~  145 (343)
                      +|.++++|.|.+|++.|.....|.+|++ .|.++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            3667777777777777777777777777 66654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=1.2e-06  Score=55.68  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=31.8

Q ss_pred             CCCCCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCc
Q psy5202          85 TSQEEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDH  127 (343)
Q Consensus        85 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~  127 (343)
                      ...++++|+|.+|++.|.....|.+|+++|.+.. ..|.+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            3556788999999999998888999988887753 45555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=6.5e-07  Score=46.97  Aligned_cols=25  Identities=36%  Similarity=0.922  Sum_probs=12.0

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHh
Confidence            3444444444444444444444444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=3.8e-07  Score=47.15  Aligned_cols=25  Identities=24%  Similarity=0.773  Sum_probs=13.1

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=4e-07  Score=46.71  Aligned_cols=25  Identities=28%  Similarity=0.499  Sum_probs=17.6

Q ss_pred             CcccccccccccCChHHHHHHHHhc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h  114 (343)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5677777777777777777777665

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=5.2e-07  Score=46.19  Aligned_cols=25  Identities=24%  Similarity=0.522  Sum_probs=15.2

Q ss_pred             CcccccccccccCChHHHHHHHHhc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h  114 (343)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666666555

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.24  E-value=4.1e-08  Score=52.97  Aligned_cols=25  Identities=28%  Similarity=0.570  Sum_probs=13.0

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ||.|.+|++.|.....|..|+++|.
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHc
Confidence            4555555555555555555555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.24  E-value=7.2e-07  Score=46.43  Aligned_cols=26  Identities=35%  Similarity=0.696  Sum_probs=14.4

Q ss_pred             cccccccccccCChHHHHHHHHhccC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            45555555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.2e-07  Score=46.60  Aligned_cols=26  Identities=35%  Similarity=0.839  Sum_probs=17.1

Q ss_pred             CcccccccccccCChHHHHHHHHhcc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      ++|.|..|++.|.....|..|+++|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.24  E-value=5e-07  Score=47.07  Aligned_cols=27  Identities=26%  Similarity=0.433  Sum_probs=16.5

Q ss_pred             cccccccccccCChHHHHHHHHhccCC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            466666666666666666666666543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.23  E-value=6.9e-07  Score=46.51  Aligned_cols=25  Identities=28%  Similarity=0.526  Sum_probs=12.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ||.|..|++.|.....|..|+++|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhc
Confidence            4455555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.21  E-value=1.1e-06  Score=45.67  Aligned_cols=25  Identities=36%  Similarity=0.828  Sum_probs=14.8

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +|.|.+|++.|.....|..|+++|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhc
Confidence            4556666666666666666665554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.21  E-value=9.4e-07  Score=45.11  Aligned_cols=24  Identities=38%  Similarity=0.764  Sum_probs=13.8

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|..|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            555555555555555555555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.18  E-value=8.8e-07  Score=46.44  Aligned_cols=27  Identities=15%  Similarity=0.481  Sum_probs=14.9

Q ss_pred             cccccccccccCChHHHHHHHHhccCC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      +|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455555555555555555555555443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.18  E-value=1.2e-06  Score=45.90  Aligned_cols=25  Identities=28%  Similarity=0.713  Sum_probs=12.2

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +|.|..||+.|.....|..|++.|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHc
Confidence            3445555555555555555544444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=8e-07  Score=46.21  Aligned_cols=26  Identities=38%  Similarity=0.769  Sum_probs=14.0

Q ss_pred             cccccccccccCChHHHHHHHHhccC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      +|.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45555555555555555555555544

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=45.67  Aligned_cols=25  Identities=20%  Similarity=0.571  Sum_probs=12.6

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +|.|..|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhc
Confidence            3455555555555555555554443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=1.2e-06  Score=45.51  Aligned_cols=25  Identities=36%  Similarity=0.784  Sum_probs=15.4

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +|.|..|++.|.....|..|+++|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHHhc
Confidence            5666666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.15  E-value=1.8e-06  Score=47.95  Aligned_cols=31  Identities=19%  Similarity=0.550  Sum_probs=15.3

Q ss_pred             ccCCCCeecCC--CCccCCCHHHHHHHHHHhcc
Q psy5202         114 HTGEKPFKCTV--CDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       114 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  144 (343)
                      |.++++|.|.+  |++.|.....|.+|++.|.+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            33444555542  55555555555555555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.44  E-value=2.8e-07  Score=46.79  Aligned_cols=24  Identities=33%  Similarity=0.632  Sum_probs=12.7

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhh
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      +|.|+.||+.|.....|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=8.9e-07  Score=45.99  Aligned_cols=26  Identities=35%  Similarity=0.695  Sum_probs=13.4

Q ss_pred             cccccccccccCChHHHHHHHHhccC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=1.5e-06  Score=46.50  Aligned_cols=28  Identities=25%  Similarity=0.585  Sum_probs=18.9

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhccCC
Q psy5202          90 KNKECE--FCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        90 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      ++|.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566776  6777777777777777766554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=3e-07  Score=46.67  Aligned_cols=25  Identities=48%  Similarity=0.915  Sum_probs=17.9

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +||.|..|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3677777777777777777777665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.2e-07  Score=47.89  Aligned_cols=26  Identities=46%  Similarity=0.857  Sum_probs=16.8

Q ss_pred             cccccccccccCChHHHHHHHHhccC
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      +|.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            56666666666666666666666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.12  E-value=1.6e-06  Score=45.94  Aligned_cols=27  Identities=48%  Similarity=0.994  Sum_probs=17.0

Q ss_pred             ccccc--ccccccCChHHHHHHHHhccCC
Q psy5202          91 NKECE--FCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        91 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      +|.|.  .|++.|.....|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6666666666666666666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.5e-07  Score=48.10  Aligned_cols=27  Identities=41%  Similarity=0.656  Sum_probs=18.0

Q ss_pred             CcccccccccccCChHHHHHHHHhccC
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ++|.|..|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            456677777777666666666666654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.11  E-value=1.3e-06  Score=44.55  Aligned_cols=25  Identities=28%  Similarity=0.676  Sum_probs=15.2

Q ss_pred             ccccccccccCChHHHHHHHHhccC
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      |.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5566666666666666666665543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.09  E-value=2.4e-06  Score=45.23  Aligned_cols=25  Identities=24%  Similarity=0.670  Sum_probs=12.8

Q ss_pred             ccccC--CCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCR--FCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~--~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +|.|.  .||+.|.....|..|++.|.
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            44554  45555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.1e-07  Score=47.50  Aligned_cols=24  Identities=38%  Similarity=0.808  Sum_probs=11.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHh
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ||.|.+|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            344444444444444444444444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=2.4e-06  Score=45.60  Aligned_cols=25  Identities=40%  Similarity=0.875  Sum_probs=12.6

Q ss_pred             CceecC--cCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCE--LCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~--~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|.  .|++.|.....|..|+++|
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            345554  4555555555555555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=3.5e-07  Score=54.16  Aligned_cols=36  Identities=22%  Similarity=0.502  Sum_probs=22.1

Q ss_pred             HHHhccCCCCeecC--CCCccCCCHHHHHHHHHHhccC
Q psy5202         110 HRRNHTGEKPFKCT--VCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       110 H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      |+..|.++++|.|.  .|++.|.....|.+|++.|.++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            33446666666664  4666666666666666666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5.1e-07  Score=47.47  Aligned_cols=24  Identities=38%  Similarity=0.800  Sum_probs=11.9

Q ss_pred             ceecCcCcccccChHHHHHHHHHh
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +|.|..|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            444555555555555555554444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.98  E-value=2.8e-06  Score=44.49  Aligned_cols=27  Identities=26%  Similarity=0.679  Sum_probs=17.2

Q ss_pred             cccccccccccCChHHHHHH-HHhccCC
Q psy5202          91 NKECEFCGKKFKYENTLQAH-RRNHTGE  117 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H-~~~h~~~  117 (343)
                      +|.|..|++.|.....|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4556543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.98  E-value=3.9e-06  Score=43.91  Aligned_cols=20  Identities=30%  Similarity=0.760  Sum_probs=11.2

Q ss_pred             ccccCCCCCCCCChHHHHHH
Q psy5202         243 VYRCRFCEMPFSVPSTLEKH  262 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H  262 (343)
                      +|.|..||+.|.....|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            45555555555555555555

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.94  E-value=2.2e-05  Score=49.53  Aligned_cols=45  Identities=18%  Similarity=0.520  Sum_probs=22.5

Q ss_pred             CcccccCHHHHHHHH-HHccCCC------ceecC--cCcccccChHHHHHHHHH
Q psy5202         191 CGKVFKNCSNLTVHR-RSHTGEK------PYKCE--LCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       191 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~  235 (343)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            555555555555555 2454433      45553  455554444555555444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.83  E-value=9.3e-06  Score=41.94  Aligned_cols=25  Identities=32%  Similarity=0.674  Sum_probs=16.9

Q ss_pred             ccccc--ccccccCChHHHHHHHHhcc
Q psy5202          91 NKECE--FCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        91 ~~~C~--~C~~~f~~~~~L~~H~~~h~  115 (343)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67777777777777766664

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.81  E-value=1.2e-05  Score=41.55  Aligned_cols=24  Identities=38%  Similarity=0.686  Sum_probs=13.4

Q ss_pred             ceecC--cCcccccChHHHHHHHHHh
Q psy5202         213 PYKCE--LCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~--~C~~~f~~~~~L~~H~~~h  236 (343)
                      +|.|.  .|++.|.....|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            45555  5555555555555555555

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.77  E-value=5.3e-05  Score=47.73  Aligned_cols=52  Identities=23%  Similarity=0.537  Sum_probs=44.2

Q ss_pred             ccccc--cccccCChHHHHHHHH-hccCCC------CeecC--CCCccCCCHHHHHHHHHHhc
Q psy5202          92 KECEF--CGKKFKYENTLQAHRR-NHTGEK------PFKCT--VCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus        92 ~~C~~--C~~~f~~~~~L~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.|..  |++.|.+...|..|+. .|.+.+      .|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            34554  9999999999999985 787665      79998  69999999999999998764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.34  E-value=0.0016  Score=50.12  Aligned_cols=81  Identities=19%  Similarity=0.299  Sum_probs=59.4

Q ss_pred             CCccc--ccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHH
Q psy5202         184 RNDTC--EFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEK  261 (343)
Q Consensus       184 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  261 (343)
                      ....|  ..|+..+. ...|..|.. .-.-++..|+.|+..+ .+..|..|+...-  ..+...|++|+..| ....|..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C--~~r~~~C~~C~~~~-~~~~l~~  154 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDC--PRRQVSCDNCAASM-AFEDKEI  154 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTC--TTCEEECTTTCCEE-EGGGHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhC--CCCCeECCCCCCcc-CHHHHHh
Confidence            34567  46887765 556788874 4455778999999888 6778999997654  67788999999987 4567799


Q ss_pred             HHhhhcCcc
Q psy5202         262 HMRKCVVNQ  270 (343)
Q Consensus       262 H~~~~~~~~  270 (343)
                      |...+.+..
T Consensus       155 H~~~~~~~~  163 (170)
T 3hcs_A          155 HDQNCPLAL  163 (170)
T ss_dssp             HHTTCCC--
T ss_pred             HHHhCcChh
Confidence            998776544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.19  E-value=0.00043  Score=50.23  Aligned_cols=75  Identities=21%  Similarity=0.350  Sum_probs=51.1

Q ss_pred             CCcccccCcccccCHHHHHHHH--HHccCC-CceecCcC------cccccChHHHHHHHHHhcCCCCcccccCCCCCCCC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHR--RSHTGE-KPYKCELC------SYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFS  254 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~  254 (343)
                      +++.|.+|+..|.+...+..|.  +.|... +.|.+..+      +..|....    +...+  .+...|.|.+|++.|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISD--GEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSS--CCCTTTEETTTTEECS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----ccccc--CCCCCeEcCCCCCEeC
Confidence            6789999999999999999998  556432 33433211      12222111    11122  3567899999999999


Q ss_pred             ChHHHHHHHh
Q psy5202         255 VPSTLEKHMR  264 (343)
Q Consensus       255 ~~~~l~~H~~  264 (343)
                      +...|..|+.
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999986

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.87  E-value=0.0009  Score=37.79  Aligned_cols=27  Identities=30%  Similarity=0.527  Sum_probs=19.7

Q ss_pred             cccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ..|.|+.|+..|.....|+.||+.+-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            457788888888888888888775543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.77  E-value=0.0027  Score=46.00  Aligned_cols=52  Identities=23%  Similarity=0.448  Sum_probs=43.6

Q ss_pred             CCcccccccccccCChHHHHHHH--Hhc-------------------------------cCCCCeecCCCCccCCCHHHH
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHR--RNH-------------------------------TGEKPFKCTVCDHACSQSAKL  135 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~--~~h-------------------------------~~~~~~~C~~C~~~f~~~~~L  135 (343)
                      .+++.|.+|+..|.+...+..|.  +.|                               .+...|.|..|+..|.+...|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            45799999999999999999998  333                               123468899999999999999


Q ss_pred             HHHHH
Q psy5202         136 KKHMK  140 (343)
Q Consensus       136 ~~H~~  140 (343)
                      ..|+.
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99985

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.75  E-value=0.00035  Score=49.67  Aligned_cols=25  Identities=32%  Similarity=0.612  Sum_probs=12.6

Q ss_pred             CCcccccCCCCCCCCChHHHHHHHh
Q psy5202         240 GKDVYRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       240 ~~~~~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      |+++|.|..|++.|.+...|..|++
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCcceEcccCcchhCCHHHHHHHHh
Confidence            4444555555555555555555544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.44  E-value=0.00076  Score=47.98  Aligned_cols=31  Identities=19%  Similarity=0.398  Sum_probs=27.9

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ..|+|+++|.|..|++.|.+...|..|++..
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4588999999999999999999999998654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.37  E-value=0.0013  Score=50.55  Aligned_cols=56  Identities=14%  Similarity=0.202  Sum_probs=44.6

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHhcCCCCcc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDV  243 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  243 (343)
                      .+..|+.|+..+ .+..|..|+......+...|+.|+..+.. ..|..|..++.  |+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~--~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCP--LALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCC--C---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCc--Chhh
Confidence            567899999988 56779999988888889999999987754 67899998886  4443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.98  E-value=0.0077  Score=34.04  Aligned_cols=24  Identities=21%  Similarity=0.343  Sum_probs=15.7

Q ss_pred             CCcccccCcccccCHHHHHHHHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRS  207 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~  207 (343)
                      ..|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456666666666666666666663

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.34  E-value=0.011  Score=31.22  Aligned_cols=24  Identities=21%  Similarity=0.396  Sum_probs=12.8

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|++|.+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            455555555555555555555444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.74  E-value=0.036  Score=29.27  Aligned_cols=23  Identities=17%  Similarity=0.488  Sum_probs=13.6

Q ss_pred             eecCcCcccccChHHHHHHHHHh
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |.|++|.+.|.+...|..|....
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhc
Confidence            55666666666666666665443

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=93.08  E-value=0.0088  Score=37.96  Aligned_cols=16  Identities=25%  Similarity=0.584  Sum_probs=12.5

Q ss_pred             CcccccCCCCCCCCCh
Q psy5202         241 KDVYRCRFCEMPFSVP  256 (343)
Q Consensus       241 ~~~~~C~~C~~~f~~~  256 (343)
                      +..|+|+.||..|.-+
T Consensus        49 ~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           49 EFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             HSEEECTTTCCEEETT
T ss_pred             HHhhcCCCccHHHhcc
Confidence            4579999999888543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.61  E-value=0.18  Score=26.67  Aligned_cols=26  Identities=31%  Similarity=0.511  Sum_probs=20.7

Q ss_pred             CCcccccccccccCChHHHHHHHHhc
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h  114 (343)
                      ...+.|..|+..|.....+..|++..
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34578888998898888888887654

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=92.48  E-value=0.059  Score=30.34  Aligned_cols=12  Identities=25%  Similarity=0.736  Sum_probs=6.7

Q ss_pred             eecCcCcccccC
Q psy5202         214 YKCELCSYACAQ  225 (343)
Q Consensus       214 ~~C~~C~~~f~~  225 (343)
                      |.|..||+.|..
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            566666666654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=91.59  E-value=0.11  Score=26.45  Aligned_cols=24  Identities=38%  Similarity=0.732  Sum_probs=19.8

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      -.|.+|.+.|+...+|.+|+|--|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            358889999999999999988655

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=90.22  E-value=0.75  Score=26.78  Aligned_cols=47  Identities=23%  Similarity=0.584  Sum_probs=24.0

Q ss_pred             ecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCC-CCCChHHHHHHHhhh
Q psy5202         215 KCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEM-PFSVPSTLEKHMRKC  266 (343)
Q Consensus       215 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~-~f~~~~~l~~H~~~~  266 (343)
                      .|.+|..-..+...|..|.....     .-+|++|-. .-.+.+.|..|.+.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp-----~gqCPYC~~~~e~tesAlQaHfkvC   52 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCI-----NGQCPYCMTITEATESALQAHYSIC   52 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHT-----TTBCTTTCCBCCSSHHHHHHHHTTC
T ss_pred             hhhHHHhhhhhHHHHHHHhccCC-----CCCCCcccCcCCcCHHHHHHHHHHh
Confidence            45555555555555555555542     123555542 344555566665543

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.75  E-value=0.15  Score=32.75  Aligned_cols=28  Identities=25%  Similarity=0.431  Sum_probs=22.0

Q ss_pred             cccccCCCCCCCC-------ChHHHHHHHhhhcCc
Q psy5202         242 DVYRCRFCEMPFS-------VPSTLEKHMRKCVVN  269 (343)
Q Consensus       242 ~~~~C~~C~~~f~-------~~~~l~~H~~~~~~~  269 (343)
                      ..-.|.+|++.+.       .-..|.+|++.+|..
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            3467999998887       356899999998843

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.53  E-value=0.23  Score=26.26  Aligned_cols=23  Identities=22%  Similarity=0.408  Sum_probs=15.5

Q ss_pred             cccccCCCCCCCCChHHHHHHHh
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      ..+.|..|+-+|.....+..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            44667777777777777777765

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.50  E-value=0.048  Score=34.64  Aligned_cols=41  Identities=22%  Similarity=0.355  Sum_probs=27.1

Q ss_pred             CcccccCcccccCHHHHHHHHHHcc----------------CCCceecCcCcccccCh
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHT----------------GEKPYKCELCSYACAQS  226 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~----------------~~~~~~C~~C~~~f~~~  226 (343)
                      .-+|++||....+. .|...|..--                .+-.|+|+.||.-|..+
T Consensus         8 ~~~~PlCG~~L~W~-eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            8 MAKCPICGSPLKWE-ELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             CEECSSSCCEECHH-HHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             cccCCcCCCccCHH-HHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            35799999998654 4544443211                12459999999988653

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.49  E-value=0.1  Score=33.32  Aligned_cols=47  Identities=19%  Similarity=0.277  Sum_probs=26.5

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHH
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRH  232 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  232 (343)
                      ..|.|..||.++.. ..|..|...-.+-..|.|-.|+..|.. ..++.|
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            44667777766543 346666555444445666666666653 334444

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=89.47  E-value=0.6  Score=27.16  Aligned_cols=49  Identities=24%  Similarity=0.467  Sum_probs=39.7

Q ss_pred             CcccccCcccccCHHHHHHHHHHccCCCceecCcCcc-cccChHHHHHHHHHh
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSY-ACAQSSKLTRHMKTH  236 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~L~~H~~~h  236 (343)
                      ...|.+|...-.....|..|...-...   +|++|-. .-.+.+.|+.|.++.
T Consensus         3 smvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkvC   52 (57)
T 2k9h_A            3 SMVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSIC   52 (57)
T ss_dssp             TTBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTTC
T ss_pred             cchhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHHh
Confidence            357999999999999999999886543   5888875 457899999998764

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.82  E-value=0.35  Score=24.58  Aligned_cols=25  Identities=32%  Similarity=0.705  Sum_probs=21.1

Q ss_pred             CcccccCcccccCHHHHHHHHHHcc
Q psy5202         185 NDTCEFCGKVFKNCSNLTVHRRSHT  209 (343)
Q Consensus       185 ~~~C~~C~~~f~~~~~l~~H~~~h~  209 (343)
                      .-.|.+|.+.|....+|..|++.-+
T Consensus         9 kqhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3469999999999999999988644

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.62  E-value=0.22  Score=33.87  Aligned_cols=29  Identities=24%  Similarity=0.552  Sum_probs=19.6

Q ss_pred             CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCC
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPF  253 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f  253 (343)
                      .+|+|..||+.|..             .-.+|-+|+.|+...
T Consensus        66 ~p~~C~~CG~~F~~-------------~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFKA-------------EINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCCC-------------CSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeecc-------------cCCCCCCCcCCCCCc
Confidence            57888888888811             134667888887654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.14  E-value=0.23  Score=31.72  Aligned_cols=47  Identities=21%  Similarity=0.408  Sum_probs=37.1

Q ss_pred             cccccccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHH
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHM  139 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  139 (343)
                      .|.|..|+.++. +..|..|...-.+-..|.|--|++.|.. ..++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            489999999987 5669999877655567999999999985 4555553

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.44  E-value=0.29  Score=33.27  Aligned_cols=30  Identities=30%  Similarity=0.605  Sum_probs=22.2

Q ss_pred             CCcccccccccccCChHHHHHHHHhccCCCCeecCCCCccC
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHAC  129 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  129 (343)
                      -.+|+|..||..|.           -...+|-+|+.|+...
T Consensus        65 v~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           65 IKPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             ECCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             EECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            45799999999992           1234678999998653

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.37  E-value=0.32  Score=24.35  Aligned_cols=22  Identities=23%  Similarity=0.448  Sum_probs=13.3

Q ss_pred             cccCCCCCCCCChHHHHHHHhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |.|++|.........|..|...
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHHH
Confidence            5566666666666666666543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=87.31  E-value=0.23  Score=32.54  Aligned_cols=23  Identities=22%  Similarity=0.388  Sum_probs=15.9

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ...|-+||+.|..   |.+|++++|+
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTC
T ss_pred             ceEecccchhhHH---HHHHHHHccC
Confidence            3567778877774   6678777654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.89  E-value=0.37  Score=31.59  Aligned_cols=27  Identities=33%  Similarity=0.644  Sum_probs=21.1

Q ss_pred             CcccccccccccCChHHHHHHHHhccCCCC
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGEKP  119 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  119 (343)
                      .-..|-+||+.|.   .|.+|+..|++..+
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CceEecccchhhH---HHHHHHHHccCCCH
Confidence            3468999999998   47799999777654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=85.68  E-value=0.31  Score=38.22  Aligned_cols=25  Identities=32%  Similarity=0.731  Sum_probs=15.0

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSY  221 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  221 (343)
                      ..|+|..||..+..             ..|+.|+.|+.
T Consensus       170 ~~~~C~~CG~i~~g-------------~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHKG-------------EDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEES-------------SCCSBCTTTCC
T ss_pred             cEEEECCCCCEEcC-------------cCCCCCCCCCC
Confidence            45667777766541             34566666663

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=85.36  E-value=0.18  Score=28.79  Aligned_cols=12  Identities=25%  Similarity=0.839  Sum_probs=6.0

Q ss_pred             CcccccCccccc
Q psy5202         185 NDTCEFCGKVFK  196 (343)
Q Consensus       185 ~~~C~~C~~~f~  196 (343)
                      .|+|..||..|.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            345555555543

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=85.17  E-value=0.38  Score=26.30  Aligned_cols=26  Identities=27%  Similarity=0.441  Sum_probs=18.8

Q ss_pred             CCcccccccccccCChHHHHHHHHhcc
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      ...|.|+.|+..|.. ..+..|.-.|.
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhhHHH
Confidence            345788888888886 55677876663

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=83.06  E-value=0.79  Score=34.26  Aligned_cols=45  Identities=24%  Similarity=0.541  Sum_probs=31.3

Q ss_pred             hHHHHHHHHHhcCCCC-----cccccCCCCCCCCChHHHHHHHhhhcCccc
Q psy5202         226 SSKLTRHMKTHGRLGK-----DVYRCRFCEMPFSVPSTLEKHMRKCVVNQN  271 (343)
Q Consensus       226 ~~~L~~H~~~h~~~~~-----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  271 (343)
                      -..|..|++...-.|.     .-|+|..||+ +....+|.+||+.|-....
T Consensus       132 GgrlieHlK~~~~~GqDyvFWQFYKCe~CgK-YvDId~~~~Hlk~Hg~~v~  181 (226)
T 2czr_A          132 GAALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGIKLH  181 (226)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTCCGG
T ss_pred             hHHHHHHHHhccccCcceEEEEEEehhhcCc-eecHHHHHHHHHHcCcchh
Confidence            4678888876432222     1378999997 5688899999998865443

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=82.98  E-value=0.51  Score=36.96  Aligned_cols=25  Identities=32%  Similarity=0.749  Sum_probs=20.3

Q ss_pred             CceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCC
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEM  251 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~  251 (343)
                      ..|+|.+||+.+.               |..|+.||.||-
T Consensus       170 ~~~~C~~CG~i~~---------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK---------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE---------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc---------------CcCCCCCCCCCC
Confidence            4699999998875               246799999995

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.93  E-value=0.58  Score=27.29  Aligned_cols=22  Identities=18%  Similarity=0.472  Sum_probs=16.3

Q ss_pred             eecCcCcccccChHHHHHHHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      -.|.+|+..|..+..|+.|+..
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4688888888887788777643

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=80.72  E-value=1  Score=35.13  Aligned_cols=27  Identities=19%  Similarity=0.432  Sum_probs=21.9

Q ss_pred             CcccccCCCCCCCCC-hHHHHHHHhhhc
Q psy5202         241 KDVYRCRFCEMPFSV-PSTLEKHMRKCV  267 (343)
Q Consensus       241 ~~~~~C~~C~~~f~~-~~~l~~H~~~~~  267 (343)
                      ..+.+|..|++.|.+ -..|+.|+..|-
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            457889999999976 888999988654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.29  E-value=0.68  Score=27.00  Aligned_cols=21  Identities=19%  Similarity=0.591  Sum_probs=19.2

Q ss_pred             cccCCCCCCCCChHHHHHHHh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      -.|.+|+..|..+..|.-|+=
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            589999999999999999983

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=80.04  E-value=0.45  Score=30.48  Aligned_cols=48  Identities=23%  Similarity=0.457  Sum_probs=36.1

Q ss_pred             Ccccc-cccccccCChHHHHHHHHhccCCCCeecCCCCccCCCHHHHHHHH
Q psy5202          90 KNKEC-EFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHM  139 (343)
Q Consensus        90 ~~~~C-~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  139 (343)
                      .+..| ..|+..+. +..|..|+...-..+...|.+|+..|.. ..|..|.
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             cccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHH
Confidence            45678 57998876 5678888876666788999999998864 4567765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	343
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	9e-11
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	9e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-09
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	8e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-05
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	3e-06
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.001
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	3e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.002
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	5e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.001
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	4e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.003
d2dmda1	28	g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {	0.002
d2dmda1	28	g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {	0.004
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.004
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.004
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.004

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (130), Expect = 9e-11
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
             R  TG KP++C  C  + ++S  L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (123), Expect = 9e-10
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
             R  TG KPF+C  CD + S+S  L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 1e-10
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
                   + YKC+ C  + + SS L++H +TH
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (120), Expect = 2e-09
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 110 HRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
                   + +KC  C  + S S+ L KH + H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 8e-04
 Identities = 14/24 (58%), Positives = 19/24 (79%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGE 211
           C+ CGK F + S+L+ HRR+HTGE
Sbjct: 15  CDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.001
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGE 117
            +  +C+ CGK F + + L  HRR HTGE
Sbjct: 10  RRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (128), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           H+GEKPY C  C  A ++SS L +H + H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (120), Expect = 2e-09
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           H+GEKP+ C  C  A S+S+ L +H ++H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 5e-06
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGE 211
            C  CGK F   S L  H+R HTGE
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGE 117
           EK   C  CGK F   + L  H+R HTGE
Sbjct: 5   EKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (127), Expect = 2e-10
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCE 217
               CGK F    +L  H + H+  + Y CE
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 1e-07
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEKPFKC 122
               CGK F ++  L+ H + H+  + + C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (127), Expect = 3e-10
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           R+HTGEKPY C  C     Q   L  H K +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (118), Expect = 4e-09
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           R HTGEKP+ C+ CD    Q   L  H K +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEK 212
           C  C K F+    L +H + +    
Sbjct: 11  CSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 8e-04
 Identities = 8/30 (26%), Positives = 12/30 (40%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEK 118
           EK   C  C K F+ +  L  H + +    
Sbjct: 6   EKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (126), Expect = 4e-10
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 187 TCEFCGKVFKNCSNLTVH-RRSHTGEKPYKCEL 218
            C+ CGK F    +L  H ++ HT E+P+KC++
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 9e-09
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 89  EKNKECEFCGKKFKYENTLQAH-RRNHTGEKPFKCTV 124
            K   C+ CGK F   + L  H ++ HT E+P KC V
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 6e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)

Query: 209 TGEKPYKCELCSYACAQSSKLTRHMK-TH 236
           +  KPY C+ C    ++   L  H+K  H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)

Query: 115 TGEKPFKCTVCDHACSQSAKLKKHMK-IH 142
           +  KP+ C  C    S+   L  H+K +H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 1e-09
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
           R+H+GEKPY+C +C     QS  +  H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (117), Expect = 6e-09
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 112 RNHTGEKPFKCTVCDHACSQSAKLKKH-MKIHDED 145
           R H+GEKP++C +C    +QS  +K H ++ H E+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 3e-09
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            C+ CGK F + S    H   H G +PY C +C         L  HMK H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 9e-09
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIH 142
           +K   C+ CGK F +++    H   H G +P+ C VC         L  HMKIH
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 1e-07
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 211 EKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMR 264
           +K Y C+ C  +    S+  RHM  H       Y C  C   F +   L  HM+
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 39/92 (42%)

Query: 117 EKPFKCTVCDHACSQSAKLKKHMKIHDEDGDKEDREEGPSASSLAAAAAAAALNLCLPNS 176
           +K + C  C  + +  ++  +HM +H                                  
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLG-------------------------------- 27

Query: 177 HMKKESRRNDTCEFCGKVFKNCSNLTVHRRSH 208
                  R   C  CGK FK   +L  H + H
Sbjct: 28  ------LRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (109), Expect = 6e-08
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 208 HTGEKPYKCELCSYACAQSSKLTRHMKTH 236
            +G++P+ C +C  A    +   RH+K H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (107), Expect = 1e-07
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDE 144
            +G++PF C +C  A +  A   +H+K+H +
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.003
 Identities = 6/29 (20%), Positives = 10/29 (34%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTGE 117
           ++   C  C   F  +     H + HT  
Sbjct: 5   KRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 3e-07
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 211 EKPYKCELCSYACAQSSKLTRHMKTH 236
           +KP++C +C    ++S  LT H++TH
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 117 EKPFKCTVCDHACSQSAKLKKHMKIH 142
           +KPF+C +C    S+S  L  H++ H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTG 210
           C  C + F    +LT H R+HTG
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 89  EKNKECEFCGKKFKYENTLQAHRRNHTG 116
           +K  +C  C + F   + L  H R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.6 bits (101), Expect = 8e-07
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHTGEK 212
           CE C + F    +L  H RSHT EK
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTH 236
           + + CE+C+ A A+   L RH ++H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEK 118
            CE C + F  +  L+ H R+HT EK
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.0 bits (89), Expect = 3e-05
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIH 142
           + F C VC  A ++   LK+H + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 2e-06
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTH 236
           K + C  C     +S  L++H+KTH
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 3e-06
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEK 212
            C  C K F    +L+ H ++H  +K
Sbjct: 4   ACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 3e-05
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIH 142
           K F C  C     +S  L KH+K H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 93  ECEFCGKKFKYENTLQAHRRNHTGEK 118
            C  C K+F   + L  H + H  +K
Sbjct: 4   ACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 3e-06
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 181 ESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY 214
            +R+   CE CGK+F++  +L  H+ SH+GEKPY
Sbjct: 1   RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.001
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 90  KNKECEFCGKKFKYENTLQAHRRNHTGEKPF 120
           K   CE CGK F+    L  H+ +H+GEKP+
Sbjct: 4   KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 5/40 (12%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 199 SNLTVHRRSHTGEKPYKCELC--SYACAQSSKLTRHMKTH 236
            ++  + +    +K ++C     +    +   +  H++TH
Sbjct: 5   GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (88), Expect = 6e-05
 Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 106 TLQAHRRNHTGEKPFKCTVCD--HACSQSAKLKKHMKIH 142
           ++  + +    +K F+C          +   ++ H++ H
Sbjct: 6   SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.5 bits (79), Expect = 9e-04
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEK 212
               C K FK   N+  H ++H  ++
Sbjct: 22  LFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 7e-06
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 187 TCEFCGKVFKNCSNLTVHRRSHTGEK 212
           T  +CGK F     L  H+R+HTGEK
Sbjct: 6   TWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 212 KPYKC--ELCSYACAQSSKLTRHMKTH 236
           +P+ C    C     +S +L RH +TH
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 7e-04
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 94  CEFCGKKFKYENTLQAHRRNHTGEK 118
             +CGK+F   + LQ H+R HTGEK
Sbjct: 7   WSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 118 KPFKCTV--CDHACSQSAKLKKHMKIH 142
           +PF CT   C    ++S +L++H + H
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 3e-05
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGE 211
           E C K +    NL  H RSHTGE
Sbjct: 8   EGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 212 KPYKC--ELCSYACAQSSKLTRHMKTH 236
           KP+KC  E C  + ++   L  H+++H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 118 KPFKCTV--CDHACSQSAKLKKHMKIH 142
           KP KCT   C  + S+   LK H++ H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 5e-05
 Identities = 13/26 (50%), Positives = 21/26 (80%)

Query: 211 EKPYKCELCSYACAQSSKLTRHMKTH 236
           E+P+KC++C YA   SS+LT H+++H
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSH 26

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (87), Expect = 7e-05
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 211 EKPYKC--ELCSYACAQSSKLTRHMKTH 236
           ++PY C    C  A  ++  L RH K+H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 117 EKPFKCTV--CDHACSQSAKLKKHMKIH 142
           ++P+ C    CD A  ++  L +H K H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 7/23 (30%), Positives = 11/23 (47%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGE 211
             C K F    +L  H++SH  +
Sbjct: 9   PGCDKAFVRNHDLIRHKKSHQEK 31

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTH 236
           KPYKC  C  A +Q+S L  H + H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 188 CEFCGKVFKNCSNLTVHRRSHT 209
           C  CGK F   S L  H+R HT
Sbjct: 5   CLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIH 142
           KP+KC  C  A SQ++ L  H +IH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 212 KPYKC--ELCSYACAQSSKLTRHMKTH 236
           +PY C  E C    ++S+ LTRH++ H
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTG 210
           E C + F   ++LT H R HTG
Sbjct: 8   ESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 118 KPFKCTV--CDHACSQSAKLKKHMKIH 142
           +P+ C V  CD   S+SA L +H++IH
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 189 EFCGKVFKNCSNLTVHRRSHTGE 211
           E CGK F    NL  H R HTG+
Sbjct: 8   EGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 212 KPYKC--ELCSYACAQSSKLTRHMKTH 236
           KP++C  E C    +    L  H++ H
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.002
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 212 KPYKCELCSYACAQSSKLTRHMKTH 236
           KPYKC+ C YA A SS L +H++ H
Sbjct: 2   KPYKCKTCDYAAADSSSLNKHLRIH 26

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (73), Expect = 0.004
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 118 KPFKCTVCDHACSQSAKLKKHMKIH 142
           KP+KC  CD+A + S+ L KH++IH
Sbjct: 2   KPYKCKTCDYAAADSSSLNKHLRIH 26

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 211 EKPYKCELCSYACAQSSKLTRHMKTHGR 238
           EKP+ C++C    A+S +  RH K H R
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIHLR 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 117 EKPFKCTVCDHACSQSAKLKKHMKIH 142
           EKPF C +C    ++S + K+H KIH
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIH 26

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.004
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 189 EFCGKVFKNCSNLTVHRRSHT 209
           + C K F   +NL  H  +H 
Sbjct: 8   DGCNKKFAQSTNLKSHILTHA 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	343
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.13
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.01
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.0
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.95
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.94
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.89
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.87
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.75
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.67
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.53
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.5
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.49
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.47
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.98
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.96
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.96
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.87
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.83
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.81
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.79
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.78
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.75
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.74
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.73
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.68
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.65
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.63
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.56
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.47
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.46
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.43
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.39
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.36
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.31
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.08
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.03
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.99
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.98
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.83
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.79
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.71
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.56
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.49
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.42
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.37
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.13
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.09
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.86
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.86
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.46
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.33
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.99
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.87
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.52
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.38
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.12
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	94.05
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.83
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.75
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.69
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.67
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.42
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.02
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.97
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.88
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	92.83
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.69
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.56
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.45
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.77
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.76
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.27
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	91.07
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.73
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.28
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.67
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.72
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	88.35
d1fu9a_	36	U-shaped transcription factor, different fingers {	86.71
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.17
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.68
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	84.32
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	84.22
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.34
d2dkta1	74	RING finger and CHY zinc finger domain-containing	80.59
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	80.34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.3e-17  Score=100.93  Aligned_cols=53  Identities=32%  Similarity=0.631  Sum_probs=29.2

Q ss_pred             CCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         211 EKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       211 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |+||.|. ||+.|.....|..|+++|.  ++++|.|.+||+.|.....|..|++.|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht--~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS--CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc--cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3455552 5555555555555555554  555555555555555555555555543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.8e-17  Score=100.32  Aligned_cols=52  Identities=35%  Similarity=0.673  Sum_probs=50.5

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++|.|. ||+.|.....|..|+++|+|++||.|.+||+.|.....|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            789995 9999999999999999999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.7e-12  Score=70.83  Aligned_cols=37  Identities=41%  Similarity=0.740  Sum_probs=34.0

Q ss_pred             CCCcccccccccccCChHHHHHHHH-hccCCCCeecCC
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRR-NHTGEKPFKCTV  124 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~  124 (343)
                      .++||+|.+||+.|.....|.+|++ +|.+++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999986 799999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.7e-12  Score=70.89  Aligned_cols=35  Identities=29%  Similarity=0.700  Sum_probs=18.6

Q ss_pred             CCceecCcCcccccChHHHHHHHH-HhcCCCCcccccC
Q psy5202         211 EKPYKCELCSYACAQSSKLTRHMK-THGRLGKDVYRCR  247 (343)
Q Consensus       211 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~C~  247 (343)
                      ++||+|.+||+.|.....|.+|++ +|.  +++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht--~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHT--SERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSC--CCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccC--CCcCcCCc
Confidence            455555555555555555555544 343  55555554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.5e-12  Score=66.73  Aligned_cols=31  Identities=45%  Similarity=0.802  Sum_probs=24.6

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +|+|++||+|.+|+++|...+.|..|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            4778888888888888888888888888875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=6.1e-13  Score=72.93  Aligned_cols=34  Identities=29%  Similarity=0.623  Sum_probs=22.5

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+++|++++||.|.+||++|...+.|..|+++|+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            5556666666666666666666666666666664

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.3e-12  Score=71.02  Aligned_cols=33  Identities=36%  Similarity=0.681  Sum_probs=20.0

Q ss_pred             HHHHccCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         204 HRRSHTGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       204 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |.++|+|++||+|.+|++.|...+.|.+|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            345566666666666666666666666666655

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=5e-12  Score=68.15  Aligned_cols=32  Identities=44%  Similarity=0.752  Sum_probs=25.2

Q ss_pred             HHccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         206 RSHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       206 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+|+|++||+|.+|+++|...+.|..|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            46778888888888888888888888888776

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.4e-11  Score=65.37  Aligned_cols=30  Identities=30%  Similarity=0.776  Sum_probs=21.3

Q ss_pred             ccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         208 HTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       208 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+|++||+|.+|++.|.....|.+|+++|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            566777777777777777777777777764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=7e-12  Score=68.08  Aligned_cols=34  Identities=21%  Similarity=0.471  Sum_probs=31.5

Q ss_pred             HHHHhcCCCCcccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         232 HMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       232 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|+|+  |++||.|..|++.|.+++.|..|+++|-
T Consensus         2 h~R~HT--geKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGST--GIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTC--CSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccC--CccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            678886  9999999999999999999999999885

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=4.1e-12  Score=69.52  Aligned_cols=37  Identities=24%  Similarity=0.544  Sum_probs=28.4

Q ss_pred             HHHHhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         109 AHRRNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       109 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      +|+++|.+++||.|+.||+.|...+.|..|+++|.++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3667777788888888888888888888888777764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-11  Score=65.87  Aligned_cols=31  Identities=35%  Similarity=0.764  Sum_probs=19.2

Q ss_pred             HccCCCceecCcCcccccChHHHHHHHHHhc
Q psy5202         207 SHTGEKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       207 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +|+|++||+|++|++.|.....|.+|++.++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            4666666666666666666666666654443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.5e-11  Score=62.45  Aligned_cols=31  Identities=42%  Similarity=0.866  Sum_probs=19.6

Q ss_pred             ccCCCCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         114 HTGEKPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       114 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      |++++||.|..|++.|...+.|..|+++|.+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            5566666666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2e-11  Score=65.57  Aligned_cols=34  Identities=26%  Similarity=0.629  Sum_probs=30.3

Q ss_pred             HHhcCCCCcccccCCCCCCCCChHHHHHHHhhhcCc
Q psy5202         234 KTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVN  269 (343)
Q Consensus       234 ~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  269 (343)
                      |+|+  |++||.|++|++.|.+...|..|++++|..
T Consensus         1 R~HT--gekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHS--GEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCS--CCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccC--CCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3565  999999999999999999999999888754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.5e-11  Score=63.96  Aligned_cols=34  Identities=41%  Similarity=0.774  Sum_probs=26.6

Q ss_pred             HhccCCCCeecCCCCccCCCHHHHHHHHHHhccC
Q psy5202         112 RNHTGEKPFKCTVCDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       112 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      ++|++++||+|.+|++.|.....|..|++.|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4677888888888888888888888888887754

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=5.7e-11  Score=59.38  Aligned_cols=27  Identities=37%  Similarity=0.886  Sum_probs=14.8

Q ss_pred             CCceecCcCcccccChHHHHHHHHHhc
Q psy5202         211 EKPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       211 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |+||+|.+|++.|...+.|.+|+++|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            345555555555555555555555553

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=5.2e-11  Score=59.55  Aligned_cols=28  Identities=36%  Similarity=0.746  Sum_probs=17.0

Q ss_pred             CCcccccccccccCChHHHHHHHHhccC
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      |+||+|.+|++.|.....|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566666666666666666666666643

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.01  E-value=9.4e-11  Score=59.39  Aligned_cols=25  Identities=36%  Similarity=0.828  Sum_probs=12.4

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ||+|++|++.|...+.|.+|+++|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             cCCCCCCCCCCCCchHcccccCccc
Confidence            4445555555555555555555443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=8.6e-11  Score=62.82  Aligned_cols=32  Identities=34%  Similarity=0.677  Sum_probs=17.0

Q ss_pred             ccccc--CcccccCHHHHHHHHHHccCCCceecC
Q psy5202         186 DTCEF--CGKVFKNCSNLTVHRRSHTGEKPYKCE  217 (343)
Q Consensus       186 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  217 (343)
                      |.|+.  |++.|.....|.+|+++|+|++||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            34443  555555555555555555555555553

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.99  E-value=1.4e-10  Score=58.76  Aligned_cols=29  Identities=45%  Similarity=0.739  Sum_probs=27.5

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEK  212 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  212 (343)
                      ++|.|++|++.|.....|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=2.1e-10  Score=60.68  Aligned_cols=29  Identities=21%  Similarity=0.392  Sum_probs=15.0

Q ss_pred             CCCCcccccccccccCChHHHHHHHHhcc
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      .+++||+|.+|++.|.....|.+|+++|.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccC
Confidence            34555555555555555555555555554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.4e-10  Score=61.02  Aligned_cols=33  Identities=30%  Similarity=0.665  Sum_probs=30.7

Q ss_pred             eecCc--CcccccChHHHHHHHHHhcCCCCcccccCC
Q psy5202         214 YKCEL--CSYACAQSSKLTRHMKTHGRLGKDVYRCRF  248 (343)
Q Consensus       214 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~  248 (343)
                      |.|+.  |++.|.....|++|+++|.  |++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht--gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS--DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH--TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC--CCCCEeCCC
Confidence            78987  9999999999999999997  999999974

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.2e-10  Score=55.61  Aligned_cols=25  Identities=48%  Similarity=0.822  Sum_probs=14.3

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +||+|.+||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3555555555555555555555555

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=57.97  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=17.8

Q ss_pred             CcccccccccccCChHHHHHHHHhccCC
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      +||.|.+|++.|.....|.+|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4566666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.4e-10  Score=57.72  Aligned_cols=25  Identities=32%  Similarity=0.696  Sum_probs=11.8

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ||.|.+|++.|...+.|.+|+++|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CEECCcCCCeecchHHhhhhcCccC
Confidence            4444444444444444444444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=7.3e-11  Score=67.47  Aligned_cols=36  Identities=17%  Similarity=0.444  Sum_probs=26.8

Q ss_pred             HHHHHHHccCCCceecCc--CcccccChHHHHHHHHHhc
Q psy5202         201 LTVHRRSHTGEKPYKCEL--CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       201 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  237 (343)
                      |..|++ |.+++||+|.+  |++.|...+.|..|+++|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            445554 77788888866  8888888888888888876

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.7e-10  Score=54.80  Aligned_cols=25  Identities=36%  Similarity=0.541  Sum_probs=24.0

Q ss_pred             cccccCCCCCCCCChHHHHHHHhhh
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      +||+|..||+.|...+.|..|+|.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            6899999999999999999999987

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=2.2e-10  Score=65.42  Aligned_cols=39  Identities=21%  Similarity=0.541  Sum_probs=25.5

Q ss_pred             HHHHHHHhccCCCCeecCC--CCccCCCHHHHHHHHHHhccC
Q psy5202         106 TLQAHRRNHTGEKPFKCTV--CDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       106 ~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      .|.+|+. |.+++||.|.+  |++.|...+.|.+|+++|.++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3445553 66777777765  777777777777777777654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.1e-09  Score=53.89  Aligned_cols=24  Identities=29%  Similarity=0.780  Sum_probs=10.8

Q ss_pred             ceecCc--CcccccChHHHHHHHHHh
Q psy5202         213 PYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      ||+|.+  |+++|...+.|++|+++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcC
Confidence            444444  444444444444444444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.7e-09  Score=53.70  Aligned_cols=26  Identities=27%  Similarity=0.710  Sum_probs=13.6

Q ss_pred             CceecCc--CcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  237 (343)
                      +||.|++  |+++|...+.|.+|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            3455544  5555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.3e-09  Score=52.98  Aligned_cols=28  Identities=46%  Similarity=0.891  Sum_probs=26.4

Q ss_pred             CCccccc--CcccccCHHHHHHHHHHccCC
Q psy5202         184 RNDTCEF--CGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       184 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      ++|+|++  |++.|.....|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5799999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=5.6e-09  Score=53.02  Aligned_cols=28  Identities=46%  Similarity=0.778  Sum_probs=26.2

Q ss_pred             CCccccc--CcccccCHHHHHHHHHHccCC
Q psy5202         184 RNDTCEF--CGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       184 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      ++|.|++  |++.|.....|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5799988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=52.39  Aligned_cols=28  Identities=46%  Similarity=0.991  Sum_probs=16.9

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhccCC
Q psy5202          90 KNKECE--FCGKKFKYENTLQAHRRNHTGE  117 (343)
Q Consensus        90 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  117 (343)
                      +||.|+  .|++.|.....|.+|+++|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            356664  3666666666666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.2e-08  Score=52.26  Aligned_cols=26  Identities=35%  Similarity=0.810  Sum_probs=15.2

Q ss_pred             CceecC--cCcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCE--LCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~--~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +||.|+  .|++.|...+.|.+|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            356663  36666666666666666664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=2.2e-08  Score=45.77  Aligned_cols=25  Identities=32%  Similarity=0.538  Sum_probs=17.1

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.+|++|++.|+++..|+.|+|.|.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3567777777777777777777654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=2e-08  Score=51.62  Aligned_cols=25  Identities=40%  Similarity=0.909  Sum_probs=13.2

Q ss_pred             CceecCc--CcccccChHHHHHHHHHh
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      +||.|.+  |++.|...+.|.+|+++|
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            4555544  555555555555555555

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=1.8e-08  Score=51.81  Aligned_cols=28  Identities=21%  Similarity=0.475  Sum_probs=23.9

Q ss_pred             CcccccCC--CCCCCCChHHHHHHHhhhcC
Q psy5202         241 KDVYRCRF--CEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       241 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ++||.|.+  |++.|.+...|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57899987  99999999999999988864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=2.1e-08  Score=50.25  Aligned_cols=26  Identities=38%  Similarity=0.927  Sum_probs=14.1

Q ss_pred             CceecCc--CcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  237 (343)
                      +||+|.+  |++.|...+.|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3555544  5555555555555555553

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=1.6e-08  Score=50.02  Aligned_cols=24  Identities=29%  Similarity=0.714  Sum_probs=10.8

Q ss_pred             ccccCC--CCCCCCChHHHHHHHhhh
Q psy5202         243 VYRCRF--CEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       243 ~~~C~~--C~~~f~~~~~l~~H~~~~  266 (343)
                      ||.|++  ||++|.+.+.|.+|+|+|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            344443  444444444444444443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.50  E-value=2e-08  Score=50.36  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=24.8

Q ss_pred             cccccCC--CCCCCCChHHHHHHHhhhcC
Q psy5202         242 DVYRCRF--CEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       242 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~  268 (343)
                      +||.|++  |++.|.+.+.|.+|+|+|.+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2e-08  Score=49.71  Aligned_cols=25  Identities=44%  Similarity=0.891  Sum_probs=23.6

Q ss_pred             CceecCc--CcccccChHHHHHHHHHh
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      +||.|++  |++.|...+.|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            6899988  999999999999999987

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=5.4e-08  Score=46.07  Aligned_cols=26  Identities=42%  Similarity=0.889  Sum_probs=17.8

Q ss_pred             CCceecCcCcccccChHHHHHHHHHh
Q psy5202         211 EKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       211 ~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ++||.|.+||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46677777777777777777776666

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.9e-08  Score=48.03  Aligned_cols=31  Identities=48%  Similarity=1.077  Sum_probs=25.5

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCce
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPY  214 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  214 (343)
                      +...|..||+.|.+...|.+|...|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5567888888888888888888888888887

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=8.8e-08  Score=43.72  Aligned_cols=24  Identities=46%  Similarity=0.917  Sum_probs=14.8

Q ss_pred             ccccccccccCChHHHHHHHHhcc
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      ++|+.|++.|..+..|..|++.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            456666666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.7e-07  Score=44.98  Aligned_cols=26  Identities=23%  Similarity=0.558  Sum_probs=13.2

Q ss_pred             cccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +||.|++|+.+|.++..+..|+|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCcccchHHHHhhccccceEeeeccc
Confidence            44555555555555555555555443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=2.3e-07  Score=43.91  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=14.4

Q ss_pred             CcccccccccccCChHHHHHHHHhc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h  114 (343)
                      +||.|.+||+.|.......+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555555

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.3e-07  Score=44.52  Aligned_cols=28  Identities=39%  Similarity=0.814  Sum_probs=18.2

Q ss_pred             CCcccccccccccCChHHHHHHHHhccC
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ++||.|++|...|..+..+..|++.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.4e-07  Score=44.26  Aligned_cols=31  Identities=45%  Similarity=0.923  Sum_probs=26.9

Q ss_pred             CcccccccccccCChHHHHHHHHhccCCCCe
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTGEKPF  120 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  120 (343)
                      +...|..||+.|.....|.+|...|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567999999999999999999999998887

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.5e-06  Score=40.66  Aligned_cols=28  Identities=32%  Similarity=0.633  Sum_probs=19.2

Q ss_pred             CCcccccccccccCChHHHHHHHHhccC
Q psy5202          89 EKNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        89 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ++||+|..|...-...+.|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3567777777776677777777777665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=3.3e-06  Score=39.75  Aligned_cols=24  Identities=38%  Similarity=0.789  Sum_probs=14.5

Q ss_pred             eecCcCcccccChHHHHHHHHHhc
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |.|++|+......+.|+.|++.|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            556666666666666666666664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.2e-06  Score=39.79  Aligned_cols=27  Identities=41%  Similarity=0.519  Sum_probs=20.5

Q ss_pred             cccccCcccccCHHHHHHHHHHccCCC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGEK  212 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  212 (343)
                      |.|+.||......+.|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            677777777777777777777777653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.9e-06  Score=41.33  Aligned_cols=24  Identities=42%  Similarity=0.863  Sum_probs=12.4

Q ss_pred             ceecCc--CcccccChHHHHHHHHHh
Q psy5202         213 PYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      ||.|.+  |++++...++|++|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            455544  555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.3e-06  Score=39.84  Aligned_cols=23  Identities=43%  Similarity=0.644  Sum_probs=11.5

Q ss_pred             ecCcCcccccChHHHHHHHHHhc
Q psy5202         215 KCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       215 ~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .|..||+.|...+.|++|+.+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTS
T ss_pred             hHHHHhHHHHHHHHHHHHhhccc
Confidence            45555555555555555554443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.1e-06  Score=39.57  Aligned_cols=26  Identities=46%  Similarity=1.091  Sum_probs=15.6

Q ss_pred             CceecCcCcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +||+|..|.+.-...+.|..|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            55666666666666666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5.5e-06  Score=38.38  Aligned_cols=25  Identities=56%  Similarity=1.169  Sum_probs=18.3

Q ss_pred             CceecCcCcccccChHHHHHHHHHh
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +||+|..|.+.-...+.|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5677777777777777777777776

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=7.9e-06  Score=37.36  Aligned_cols=26  Identities=50%  Similarity=0.775  Sum_probs=18.2

Q ss_pred             ccccCcccccCHHHHHHHHHHccCCC
Q psy5202         187 TCEFCGKVFKNCSNLTVHRRSHTGEK  212 (343)
Q Consensus       187 ~C~~C~~~f~~~~~l~~H~~~h~~~~  212 (343)
                      .|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            47777777777777777777777653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=7.5e-06  Score=38.05  Aligned_cols=26  Identities=46%  Similarity=0.818  Sum_probs=18.3

Q ss_pred             cccccCcccccCHHHHHHHHHHccCC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      ..|..||+.|...+.|++|..+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777777777777777777777664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=6.5e-06  Score=39.47  Aligned_cols=25  Identities=20%  Similarity=0.539  Sum_probs=13.3

Q ss_pred             cccccc--cccccCChHHHHHHHHhcc
Q psy5202          91 NKECEF--CGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        91 ~~~C~~--C~~~f~~~~~L~~H~~~h~  115 (343)
                      ||.|.+  |++.|...++|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455554  5555555555555555443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.5e-06  Score=43.15  Aligned_cols=27  Identities=26%  Similarity=0.760  Sum_probs=21.4

Q ss_pred             CCcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         240 GKDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       240 ~~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      |.+||.|..|++.|-++.++.+|.-.|
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhh
Confidence            667888888888888888888887654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=6.9e-06  Score=36.93  Aligned_cols=23  Identities=43%  Similarity=0.920  Sum_probs=11.0

Q ss_pred             eecCcCcccccChHHHHHHHHHh
Q psy5202         214 YKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      |+|..|.+.|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34444444444444444444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.2e-05  Score=38.03  Aligned_cols=26  Identities=27%  Similarity=0.673  Sum_probs=15.0

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ||.|.+|.++....++|+.|+++.|.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            55566666655556666666555443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.75  E-value=6.8e-06  Score=39.75  Aligned_cols=25  Identities=28%  Similarity=0.591  Sum_probs=12.3

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      ||.|.+|++.|.++..|.+|+++-|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            3445555555555555555544433

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=7.1e-06  Score=38.72  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=15.1

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ||+|.+|..-..+.++|..|+++.|+
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            55566665555556666666655553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.74  E-value=1.3e-05  Score=36.01  Aligned_cols=24  Identities=38%  Similarity=0.764  Sum_probs=22.2

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |+|..|.+.|..++.|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999763

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.73  E-value=1.4e-05  Score=37.39  Aligned_cols=25  Identities=40%  Similarity=0.785  Sum_probs=15.3

Q ss_pred             CceecCc--CcccccChHHHHHHHHHh
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~~~h  236 (343)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566643  666666666666666655

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=2.3e-05  Score=35.82  Aligned_cols=24  Identities=29%  Similarity=0.401  Sum_probs=14.5

Q ss_pred             ccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         245 RCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       245 ~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      +|+.|.+.|.++..|+.|-|+|.+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            466666666666666666666554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.1e-05  Score=37.39  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=24.3

Q ss_pred             cccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +||+|..|.+.-...++|.+|+|.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=2.2e-05  Score=36.79  Aligned_cols=28  Identities=39%  Similarity=0.678  Sum_probs=17.9

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      ..|.|..|..+|..+-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4466666666666666666666666653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2e-05  Score=41.00  Aligned_cols=28  Identities=32%  Similarity=0.736  Sum_probs=24.3

Q ss_pred             cCCCceecCcCcccccChHHHHHHHHHh
Q psy5202         209 TGEKPYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       209 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      +|-+||.|.+|++.|..+..+.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4679999999999999999999997543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.3e-05  Score=37.70  Aligned_cols=23  Identities=35%  Similarity=0.941  Sum_probs=19.5

Q ss_pred             ccccCCCCCCCCChHHHHHHHhh
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      ||.|..|...|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57888888888888888888874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.56  E-value=2.9e-05  Score=40.31  Aligned_cols=25  Identities=28%  Similarity=0.700  Sum_probs=13.6

Q ss_pred             cccccccccccCChHHHHHHHHhcc
Q psy5202          91 NKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        91 ~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      .|+|.+|++.|.+...|--||+.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3555555555555555555555553

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=4.3e-05  Score=35.87  Aligned_cols=24  Identities=38%  Similarity=0.984  Sum_probs=21.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHh
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      ||.|..|...|..+.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            689999999999999999999764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.46  E-value=3.6e-05  Score=36.02  Aligned_cols=24  Identities=42%  Similarity=0.970  Sum_probs=11.5

Q ss_pred             CeecCC--CCccCCCHHHHHHHHHHh
Q psy5202         119 PFKCTV--CDHACSQSAKLKKHMKIH  142 (343)
Q Consensus       119 ~~~C~~--C~~~f~~~~~L~~H~~~h  142 (343)
                      ||.|+.  |++.|...+.|++|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            444443  455555555555554443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=5.1e-05  Score=35.53  Aligned_cols=27  Identities=30%  Similarity=0.594  Sum_probs=16.9

Q ss_pred             CcccccccccccCChHHHHHHHHhccC
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ..|.|..|...|..+-.|+.||..|.+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            346666666666666666666666654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=5.2e-05  Score=35.75  Aligned_cols=26  Identities=42%  Similarity=0.870  Sum_probs=23.0

Q ss_pred             CceecCcCcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      +||+|.+|.+.....++|+.|+++.|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            58999999999999999999998765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=6.7e-05  Score=38.88  Aligned_cols=24  Identities=29%  Similarity=0.701  Sum_probs=12.7

Q ss_pred             ceecCcCcccccChHHHHHHHHHh
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h  236 (343)
                      .|+|.+|++.|.+-..|-.|++.|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTT
T ss_pred             ccCCCCCCCccCCcccccchHhhh
Confidence            355555555555555555555555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=8.9e-05  Score=34.90  Aligned_cols=27  Identities=41%  Similarity=0.812  Sum_probs=19.6

Q ss_pred             CCeecCCCCccCCCHHHHHHHHHHhcc
Q psy5202         118 KPFKCTVCDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       118 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  144 (343)
                      +||+|.+|.......++|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            467777777777777777777776654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.31  E-value=6.6e-05  Score=36.24  Aligned_cols=23  Identities=39%  Similarity=0.826  Sum_probs=20.8

Q ss_pred             ceecCcCcccccChHHHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      ||.|.+|++.|..+..|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            79999999999999999999754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00022  Score=32.76  Aligned_cols=23  Identities=17%  Similarity=0.379  Sum_probs=17.8

Q ss_pred             ccccCCCCCCCCChHHHHHHHhh
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      ||+|..||+.|-++.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57888888888888888888653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00019  Score=36.75  Aligned_cols=27  Identities=22%  Similarity=0.369  Sum_probs=17.3

Q ss_pred             Cccccc--CCCCCCCCChHHHHHHHhhhc
Q psy5202         241 KDVYRC--RFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       241 ~~~~~C--~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      ++||.|  +-|+.+|.+...|..|.++|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            566666  446666666666666666654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=7.4e-05  Score=36.07  Aligned_cols=21  Identities=38%  Similarity=0.670  Sum_probs=10.1

Q ss_pred             ccccCC--CCCCCCChHHHHHHH
Q psy5202         243 VYRCRF--CEMPFSVPSTLEKHM  263 (343)
Q Consensus       243 ~~~C~~--C~~~f~~~~~l~~H~  263 (343)
                      ||.|.+  |.|.|+..+.-.+|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  444444444444444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.99  E-value=0.00016  Score=33.89  Aligned_cols=26  Identities=35%  Similarity=0.549  Sum_probs=13.8

Q ss_pred             cccccc--cccccCChHHHHHHHHhccC
Q psy5202          91 NKECEF--CGKKFKYENTLQAHRRNHTG  116 (343)
Q Consensus        91 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  116 (343)
                      ||.|.+  |.+.|.+...|.+|..+|.+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455544  55555555555555555543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00032  Score=32.48  Aligned_cols=25  Identities=40%  Similarity=0.862  Sum_probs=19.6

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      |-+|+.|.+...++..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888888773

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00051  Score=35.16  Aligned_cols=28  Identities=25%  Similarity=0.568  Sum_probs=23.5

Q ss_pred             CCCceec--CcCcccccChHHHHHHHHHhc
Q psy5202         210 GEKPYKC--ELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       210 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4789999  569999999999999988874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00021  Score=34.42  Aligned_cols=26  Identities=46%  Similarity=0.857  Sum_probs=22.0

Q ss_pred             CceecCc--CcccccChHHHHHHH-HHhc
Q psy5202         212 KPYKCEL--CSYACAQSSKLTRHM-KTHG  237 (343)
Q Consensus       212 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~  237 (343)
                      +||.|.+  |.+.|...+.-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5899977  999999999999997 7774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00059  Score=31.31  Aligned_cols=23  Identities=22%  Similarity=0.572  Sum_probs=16.4

Q ss_pred             ceecCcCcccccChHHHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      ||+|..||+.+-.+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57777777777777777777543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00069  Score=30.26  Aligned_cols=21  Identities=38%  Similarity=0.912  Sum_probs=10.7

Q ss_pred             CeecCCCCccCCCHHHHHHHH
Q psy5202         119 PFKCTVCDHACSQSAKLKKHM  139 (343)
Q Consensus       119 ~~~C~~C~~~f~~~~~L~~H~  139 (343)
                      ||+|..|...|..+..|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            345555555555555555554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00057  Score=32.02  Aligned_cols=28  Identities=29%  Similarity=0.684  Sum_probs=24.8

Q ss_pred             CCeecCC--CCccCCCHHHHHHHHHHhccC
Q psy5202         118 KPFKCTV--CDHACSQSAKLKKHMKIHDED  145 (343)
Q Consensus       118 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  145 (343)
                      +||.|.+  |.+.|.+...|.+|...|.++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788976  999999999999999999764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00044  Score=30.91  Aligned_cols=21  Identities=48%  Similarity=0.888  Sum_probs=13.1

Q ss_pred             ceecCcCcccccChHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHM  233 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~  233 (343)
                      ||+|.-|...|..+..|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.56  E-value=0.00073  Score=30.30  Aligned_cols=22  Identities=27%  Similarity=0.721  Sum_probs=12.8

Q ss_pred             cccCCCCCCCCChHHHHHHHhh
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |.|++|-+.|.++.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666665553

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00068  Score=33.38  Aligned_cols=27  Identities=22%  Similarity=0.597  Sum_probs=21.1

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhcCc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCVVN  269 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  269 (343)
                      .|.|..||+.|.++..+.+|-..|.+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            477888888888888888888777653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0015  Score=30.10  Aligned_cols=22  Identities=27%  Similarity=0.653  Sum_probs=14.4

Q ss_pred             eecCcCcccccChHHHHHHHHH
Q psy5202         214 YKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       214 ~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      |+|+.|+....+++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5666666666666666666654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.37  E-value=0.0017  Score=29.12  Aligned_cols=22  Identities=23%  Similarity=0.665  Sum_probs=12.6

Q ss_pred             eecCCCCccCCCHHHHHHHHHH
Q psy5202         120 FKCTVCDHACSQSAKLKKHMKI  141 (343)
Q Consensus       120 ~~C~~C~~~f~~~~~L~~H~~~  141 (343)
                      |.|++|-+.|..+.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4555555555555555555554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0011  Score=30.52  Aligned_cols=25  Identities=28%  Similarity=0.558  Sum_probs=22.6

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      .|+|+.|+-...+++.|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4899999999999999999998654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0018  Score=34.85  Aligned_cols=25  Identities=28%  Similarity=0.644  Sum_probs=17.3

Q ss_pred             ceecCcCcccccChHHHHHHHHHhc
Q psy5202         213 PYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      .|.|..|++.|.....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3667777777777777777776664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0023  Score=34.39  Aligned_cols=27  Identities=22%  Similarity=0.476  Sum_probs=24.2

Q ss_pred             cccccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ..|.|..|||.|.....|+.|...|-.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            468999999999999999999988754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0029  Score=29.18  Aligned_cols=25  Identities=24%  Similarity=0.356  Sum_probs=22.7

Q ss_pred             ccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         243 VYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       243 ~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |-+|+.|.+..+++..|+.|.|.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4589999999999999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0036  Score=30.75  Aligned_cols=27  Identities=26%  Similarity=0.546  Sum_probs=20.5

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccC
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTG  210 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  210 (343)
                      ..|.|..|+++|..+..+.+|.....|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            357888888888888888888766554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.46  E-value=0.0055  Score=29.15  Aligned_cols=27  Identities=37%  Similarity=0.769  Sum_probs=16.0

Q ss_pred             Cccccc--CcccccCHHHHHHHHHHccCC
Q psy5202         185 NDTCEF--CGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       185 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      .|.|..  |+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            455543  666666666666666666553

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.33  E-value=0.0076  Score=28.64  Aligned_cols=25  Identities=28%  Similarity=0.651  Sum_probs=12.0

Q ss_pred             eecCC--CCccCCCHHHHHHHHHHhcc
Q psy5202         120 FKCTV--CDHACSQSAKLKKHMKIHDE  144 (343)
Q Consensus       120 ~~C~~--C~~~f~~~~~L~~H~~~h~~  144 (343)
                      |.|.+  |+..|...+.|..|+-.|++
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            44433  45555555555555544443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.0065  Score=30.30  Aligned_cols=24  Identities=46%  Similarity=0.560  Sum_probs=18.8

Q ss_pred             cccCcccccCHHHHHHHHHHccCC
Q psy5202         188 CEFCGKVFKNCSNLTVHRRSHTGE  211 (343)
Q Consensus       188 C~~C~~~f~~~~~l~~H~~~h~~~  211 (343)
                      |+-=++.|.....|..|+|.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456789999999999999885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.87  E-value=0.01  Score=28.77  Aligned_cols=23  Identities=43%  Similarity=0.756  Sum_probs=18.3

Q ss_pred             cccccCCCCCCCCChHHHHHHHh
Q psy5202         242 DVYRCRFCEMPFSVPSTLEKHMR  264 (343)
Q Consensus       242 ~~~~C~~C~~~f~~~~~l~~H~~  264 (343)
                      ..|.|.-||-+|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45778888888888888888875

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.025  Score=26.33  Aligned_cols=22  Identities=27%  Similarity=0.612  Sum_probs=14.1

Q ss_pred             cccccCcccccCHHHHHHHHHH
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRS  207 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~  207 (343)
                      |.|..||+...+...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5666666666666666666543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.38  E-value=0.013  Score=28.78  Aligned_cols=27  Identities=22%  Similarity=0.556  Sum_probs=14.8

Q ss_pred             CcccccCCCCCCCCChHHHHHHHhhhc
Q psy5202         241 KDVYRCRFCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       241 ~~~~~C~~C~~~f~~~~~l~~H~~~~~  267 (343)
                      +..|+|.+|.+.+...+++-+|.-+-|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            345555555555555555555554433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.12  E-value=0.021  Score=25.89  Aligned_cols=18  Identities=28%  Similarity=0.482  Sum_probs=11.4

Q ss_pred             CcccccChHHHHHHHHHh
Q psy5202         219 CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       219 C~~~f~~~~~L~~H~~~h  236 (343)
                      |++.|.....|+.|+..|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            666666666666666555

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.05  E-value=0.014  Score=30.29  Aligned_cols=12  Identities=42%  Similarity=1.157  Sum_probs=6.3

Q ss_pred             CceecCcCcccc
Q psy5202         212 KPYKCELCSYAC  223 (343)
Q Consensus       212 ~~~~C~~C~~~f  223 (343)
                      +.|.|.+||+.+
T Consensus         4 ~~~~C~vCG~i~   15 (37)
T d1nnqa2           4 KVYICPICGYTA   15 (37)
T ss_dssp             CEEECTTTCCEE
T ss_pred             cEEECCCCCCEe
Confidence            345566666443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.044  Score=25.45  Aligned_cols=24  Identities=25%  Similarity=0.513  Sum_probs=13.8

Q ss_pred             eecCCCCccCCCHHHHHHHHHHhc
Q psy5202         120 FKCTVCDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       120 ~~C~~C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.|..|++...+...++.|+..-|
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            556666666666666666654433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.0086  Score=35.82  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=22.2

Q ss_pred             CCcccccCCCCCCCCChHHHHHHHhh
Q psy5202         240 GKDVYRCRFCEMPFSVPSTLEKHMRK  265 (343)
Q Consensus       240 ~~~~~~C~~C~~~f~~~~~l~~H~~~  265 (343)
                      |...|.|..|++.|.+...|..|++.
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34558999999999999999999974

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.023  Score=26.19  Aligned_cols=18  Identities=28%  Similarity=0.660  Sum_probs=11.7

Q ss_pred             CcccccChHHHHHHHHHh
Q psy5202         219 CSYACAQSSKLTRHMKTH  236 (343)
Q Consensus       219 C~~~f~~~~~L~~H~~~h  236 (343)
                      |.+.|...+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            666666666666666555

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.022  Score=26.27  Aligned_cols=23  Identities=26%  Similarity=0.502  Sum_probs=19.7

Q ss_pred             ccCC--CCCCCCChHHHHHHHhhhc
Q psy5202         245 RCRF--CEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       245 ~C~~--C~~~f~~~~~l~~H~~~~~  267 (343)
                      .|+.  |++.|...+.+++|+.+|-
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4654  9999999999999998874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.67  E-value=0.019  Score=27.82  Aligned_cols=22  Identities=27%  Similarity=0.514  Sum_probs=17.0

Q ss_pred             ceecCcCcccccChHHHHHHHH
Q psy5202         213 PYKCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       213 ~~~C~~C~~~f~~~~~L~~H~~  234 (343)
                      .|.|.-||..|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888887753

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.42  E-value=0.023  Score=29.14  Aligned_cols=12  Identities=33%  Similarity=0.736  Sum_probs=6.7

Q ss_pred             CceecCcCcccc
Q psy5202         212 KPYKCELCSYAC  223 (343)
Q Consensus       212 ~~~~C~~C~~~f  223 (343)
                      +.|.|.+||+..
T Consensus         4 ~~~vC~vCGyi~   15 (36)
T d1yuza2           4 KFHLCPICGYIH   15 (36)
T ss_dssp             CEEECSSSCCEE
T ss_pred             CEEECCCCCCEe
Confidence            446666666443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.02  E-value=0.035  Score=32.46  Aligned_cols=35  Identities=14%  Similarity=0.431  Sum_probs=18.3

Q ss_pred             CCcccccCcccccCHHHHHHHHHHccCCCceecCcCcc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSY  221 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  221 (343)
                      ..|+|+.|+++|.....+.   ..-.....|.|.+|+-
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCC
T ss_pred             CceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCC
Confidence            4566666666665544332   1223334566666653

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.97  E-value=0.068  Score=28.43  Aligned_cols=27  Identities=22%  Similarity=0.410  Sum_probs=21.2

Q ss_pred             CCCCcccccccccccCChHHHHHHHHh
Q psy5202          87 QEEKNKECEFCGKKFKYENTLQAHRRN  113 (343)
Q Consensus        87 ~~~~~~~C~~C~~~f~~~~~L~~H~~~  113 (343)
                      ..+.|-.|++|+.+.....+|++|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            356677888888888888888888764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.88  E-value=0.1  Score=27.70  Aligned_cols=26  Identities=27%  Similarity=0.483  Sum_probs=17.4

Q ss_pred             CCcccccCcccccCHHHHHHHHHHcc
Q psy5202         184 RNDTCEFCGKVFKNCSNLTVHRRSHT  209 (343)
Q Consensus       184 ~~~~C~~C~~~f~~~~~l~~H~~~h~  209 (343)
                      .+-.|++|+.+.....+|++|+..-+
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            55667777777777777777765533

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.032  Score=27.70  Aligned_cols=26  Identities=35%  Similarity=0.846  Sum_probs=19.4

Q ss_pred             CcccccCCCCCCCCChHHHHHHHhhh
Q psy5202         241 KDVYRCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       241 ~~~~~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      .+.|.|++|-+-..+...|.+|+.+|
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~KC   30 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKKC   30 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHHT
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHhC
Confidence            35677888887777888888887765

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.69  E-value=0.032  Score=25.26  Aligned_cols=18  Identities=50%  Similarity=0.925  Sum_probs=11.5

Q ss_pred             cccccCChHHHHHHHHhc
Q psy5202          97 CGKKFKYENTLQAHRRNH  114 (343)
Q Consensus        97 C~~~f~~~~~L~~H~~~h  114 (343)
                      |++.|.....|..|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            666666666666666555

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.56  E-value=0.072  Score=26.09  Aligned_cols=23  Identities=30%  Similarity=0.732  Sum_probs=13.3

Q ss_pred             CceecCcCcccccChHHHHHHHH
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMK  234 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~  234 (343)
                      ..|+|.+|.+.+..-+++-+|.-
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHH
Confidence            34566666666666666666643

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.45  E-value=0.052  Score=31.68  Aligned_cols=38  Identities=21%  Similarity=0.462  Sum_probs=27.2

Q ss_pred             CCCcccccccccccCChHHHHHHHHhccCCCCeecCCCCcc
Q psy5202          88 EEKNKECEFCGKKFKYENTLQAHRRNHTGEKPFKCTVCDHA  128 (343)
Q Consensus        88 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~  128 (343)
                      ....|.|+.|++.|.....+..   .-.....|.|.+|+..
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             cCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            3456999999999986544432   3334567999999864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.067  Score=24.71  Aligned_cols=18  Identities=28%  Similarity=0.355  Sum_probs=9.8

Q ss_pred             CCCCCCChHHHHHHHhhh
Q psy5202         249 CEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       249 C~~~f~~~~~l~~H~~~~  266 (343)
                      ||+.|+++..|..|.+.-
T Consensus         8 c~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             TCCEESSHHHHHHHHHHG
T ss_pred             chhhhccHHHHHhHHHHH
Confidence            555555555555555443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.76  E-value=0.023  Score=33.91  Aligned_cols=24  Identities=21%  Similarity=0.455  Sum_probs=18.0

Q ss_pred             CceecCcCcccccChHHHHHHHHH
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKT  235 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~  235 (343)
                      ..|.|..|++.|.+...|..|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788888888888888888653

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.27  E-value=0.069  Score=24.75  Aligned_cols=24  Identities=21%  Similarity=0.715  Sum_probs=16.8

Q ss_pred             cccC--CCCCCCCChHHHHHHHhhhc
Q psy5202         244 YRCR--FCEMPFSVPSTLEKHMRKCV  267 (343)
Q Consensus       244 ~~C~--~C~~~f~~~~~l~~H~~~~~  267 (343)
                      |.|.  .|+.+|.++.++++|..+.|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            5564  37778888888877776554

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.098  Score=23.31  Aligned_cols=22  Identities=32%  Similarity=0.853  Sum_probs=13.7

Q ss_pred             ccCCCCCCCCChHHHHHHHhhh
Q psy5202         245 RCRFCEMPFSVPSTLEKHMRKC  266 (343)
Q Consensus       245 ~C~~C~~~f~~~~~l~~H~~~~  266 (343)
                      .|++|..+|.+...-..|..+|
T Consensus         2 vcpycslrf~sp~lk~ehe~kc   23 (26)
T d1wjpa2           2 VCPYCSLRFFSPELKQEHESKC   23 (26)
T ss_dssp             CCTTTCCCBSSHHHHHHHHHHC
T ss_pred             CCCcceeeeCCHHHhhHhhhhc
Confidence            3677777776666666665544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.73  E-value=0.1  Score=25.82  Aligned_cols=16  Identities=38%  Similarity=0.603  Sum_probs=8.3

Q ss_pred             CCCChHHHHHHHhhhc
Q psy5202         252 PFSVPSTLEKHMRKCV  267 (343)
Q Consensus       252 ~f~~~~~l~~H~~~~~  267 (343)
                      .|.....|..|||.|.
T Consensus        16 pf~a~YkLv~H~R~HT   31 (33)
T d2glia2          16 PFKAQYMLVVHMRRHT   31 (33)
T ss_dssp             CCSSHHHHHHHTHHHH
T ss_pred             cchhHHHHHHHHhhcC
Confidence            3555555555555543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.12  Score=29.68  Aligned_cols=26  Identities=23%  Similarity=0.535  Sum_probs=17.7

Q ss_pred             CcccccccccccCChHHHHHHHHhcc
Q psy5202          90 KNKECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        90 ~~~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      ..|+|..|...|.....|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            34777777777777777777766663

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.67  E-value=0.12  Score=29.60  Aligned_cols=26  Identities=27%  Similarity=0.692  Sum_probs=20.3

Q ss_pred             CceecCcCcccccChHHHHHHHHHhc
Q psy5202         212 KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       212 ~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ..|+|..|...|.+...|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            45888888888888888888877775

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.72  E-value=0.34  Score=22.35  Aligned_cols=24  Identities=33%  Similarity=0.706  Sum_probs=13.5

Q ss_pred             eecCC--CCccCCCHHHHHHHHHHhc
Q psy5202         120 FKCTV--CDHACSQSAKLKKHMKIHD  143 (343)
Q Consensus       120 ~~C~~--C~~~f~~~~~L~~H~~~h~  143 (343)
                      |.|..  |+-.|.++.+++.|....|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            45543  6666666666666655443

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.35  E-value=0.25  Score=24.38  Aligned_cols=24  Identities=29%  Similarity=0.520  Sum_probs=15.6

Q ss_pred             CCeecCCCCccCCCHHHHHHHHHH
Q psy5202         118 KPFKCTVCDHACSQSAKLKKHMKI  141 (343)
Q Consensus       118 ~~~~C~~C~~~f~~~~~L~~H~~~  141 (343)
                      +.|.|++|-+-..+...|.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            456666676666666666666643

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.71  E-value=0.33  Score=24.06  Aligned_cols=24  Identities=33%  Similarity=0.581  Sum_probs=20.4

Q ss_pred             ccccccccccCChHHHHHHHHhcc
Q psy5202          92 KECEFCGKKFKYENTLQAHRRNHT  115 (343)
Q Consensus        92 ~~C~~C~~~f~~~~~L~~H~~~h~  115 (343)
                      --|..|+-.|.....+..|.+...
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk~YC   32 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHHHTS
T ss_pred             hHHhhCCceehhHHHHHHHHHhcc
Confidence            359999999999999999987543

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.68  E-value=0.21  Score=24.62  Aligned_cols=25  Identities=16%  Similarity=0.262  Sum_probs=14.6

Q ss_pred             cccCCCCCCCCChHHHHHHHhhhcC
Q psy5202         244 YRCRFCEMPFSVPSTLEKHMRKCVV  268 (343)
Q Consensus       244 ~~C~~C~~~f~~~~~l~~H~~~~~~  268 (343)
                      ..|-.|-++|++.-++.+|+--.|.
T Consensus         4 ltclecmrtfkssfsiwrhqvevhn   28 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHN   28 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheecc
Confidence            4466666666666666666654443

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=84.32  E-value=0.11  Score=26.78  Aligned_cols=10  Identities=20%  Similarity=0.172  Sum_probs=5.1

Q ss_pred             cccccCcccc
Q psy5202         186 DTCEFCGKVF  195 (343)
Q Consensus       186 ~~C~~C~~~f  195 (343)
                      +.|+.||..|
T Consensus         3 ~vc~~cG~~Y   12 (37)
T d2ak3a2           3 WIHPGSGRVY   12 (37)
T ss_dssp             EEETTTTEEE
T ss_pred             eeeCCcCChh
Confidence            3455555555

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=84.22  E-value=0.31  Score=34.17  Aligned_cols=44  Identities=25%  Similarity=0.544  Sum_probs=30.0

Q ss_pred             hHHHHHHHHHhcCCCC-----cccccCCCCCCCCChHHHHHHHhhhcCcc
Q psy5202         226 SSKLTRHMKTHGRLGK-----DVYRCRFCEMPFSVPSTLEKHMRKCVVNQ  270 (343)
Q Consensus       226 ~~~L~~H~~~h~~~~~-----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  270 (343)
                      -..|..|++.-.-.|.     .-|+|..||+ +....+|.+||+.|-...
T Consensus       124 GgrlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG~~~  172 (218)
T d2czra1         124 GAALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHGIKL  172 (218)
T ss_dssp             HHHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTTCCG
T ss_pred             hHHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcCcch
Confidence            4567788775432222     1378999996 567888999999876544

>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: CHY zinc finger-like
superfamily: CHY zinc finger-like
family: CHY zinc finger
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.59  E-value=0.16  Score=30.97  Aligned_cols=50  Identities=18%  Similarity=0.281  Sum_probs=31.3

Q ss_pred             cccccCcccccCHHHHHHHHHHcc----CCCceecCcCcccccChHHHHHHHHHhcCCCCcccccCCCCCCC
Q psy5202         186 DTCEFCGKVFKNCSNLTVHRRSHT----GEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPF  253 (343)
Q Consensus       186 ~~C~~C~~~f~~~~~l~~H~~~h~----~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~C~~C~~~f  253 (343)
                      +.|..||+.+.-..== .-+..|.    ..+.+.|..|++...                 .+-.|+.||-+|
T Consensus        21 l~C~~Cg~~~~C~~C~-~~lt~H~~~~k~~~~l~CH~Cg~~~~-----------------~~~~C~~Cgs~F   74 (74)
T d2dkta1          21 LKAPCCDKLYTCRLCH-DTNEDHQLDRFKVKEVQCINCEKLQH-----------------AQQTCEDCSTLF   74 (74)
T ss_dssp             EEETTTTEEESSHHHH-HHTSSSCCCSSSCCCEEESSSCCEEC-----------------SCSBCSSSCCBS
T ss_pred             EEcCcCcCeeeCCCCC-CcccccccccccCCEEEeccCCCccc-----------------CCCcCCCCCCCC
Confidence            5688888887654211 1112242    456789999997542                 234599998877

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=80.34  E-value=0.41  Score=33.57  Aligned_cols=38  Identities=32%  Similarity=0.682  Sum_probs=26.9

Q ss_pred             HHHHHHHHHc--cCC-----CceecCcCcccccChHHHHHHHHHhc
Q psy5202         199 SNLTVHRRSH--TGE-----KPYKCELCSYACAQSSKLTRHMKTHG  237 (343)
Q Consensus       199 ~~l~~H~~~h--~~~-----~~~~C~~C~~~f~~~~~L~~H~~~h~  237 (343)
                      ..|..|++.-  .|.     .-|+|..||+ +..-.+|.+|++.|.
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            4567777652  222     2389999995 567789999999984