Psyllid ID: psy677

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
Protein Sequence
MSNSNRPIGTYSVLCEVGKLTDDCFVFSVAGSLETEELSVGSPSTKDDSGELCQPKTELITDSPLGLHEEEEETSLSSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQPGAASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHPNMEGMPVVTTPL
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEcccccccccccccccccccccccccccccccccccccccccEcccccccccccEEcccccccccccccEccccccccccccccccccccHHEEEEccccccccccccccccccccccEEEEEEcccccccccccccccEcccHHHHHHEEccccccccccccccccccccHHHHHcEEcccccccccHcccccccccHHHHHccccccccccHccHHHHHHHHHHHHHHcccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccccccccccccccccHHHHHccc
Coil and Loop (DISEMBL)
msnsnrpigtYSVLCEvgkltddcFVFSVAgsleteelsvgspstkddsgelcqpktelitdsplglheeeeetslsstismypgsnpshsdkisyrgiftttnsspshqpgaasspgnnwmltgtdkslfpplfissgvlgqsnnsnqgpysgsspshydersqQHEMLNINIecgalkqpsssysscsgeqDVYARVNQslmhspnnkyqwldspVEYSASIvqaqpgiipkqepvygntnlsgcgslvnlsdpnnpgssypvqlaeynpstskghEILSQVyqqsplplklvpvkprkypnrpsktpvherpyacpvencdrrfsrsdELTRHIrihtgqkpfqcricmrsfsrsdhltthirthtgekpfscdvcgrkfarsdeKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVhqqqqhhhhhhhhpnmegmpvvttpl
Flexible Loop (DISEMBL)
msnsnrpigTYSVLCEVGKLTDDCFVFSVAGSleteelsvgspstkddsgelcqpktelitdsplglhEEEEETSLSSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQPGAASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQsplplklvpvkprkypnrpsktpvherpyacpvencdRRFSRSDELTRhirihtgqkpfqcrICMRSFSRSDHLTThirthtgekpfscdvCGRKFarsdekkrhakvhlkqrskKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHhhhhpnmegmpvvttPL
Low Complexity Region (SEG)
MSNSNRPIGTYSVLCEVGKLTDDCFVFSVAGSLETEELSVGSPSTKDDSGELCQPKTELITDSPLGLHeeeeeTSLSSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQPGAASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSplplklvpvkpRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSqqqaqqqqqqnhvhqqqqhhhhhhhhPNMEGMPVVTTPL
Disordered region (IsUnstruct)
*******IGTYSVLCEVGKLTDDCFVFSVAGS*****************************************************************************************MLTGTDKSLFPPLFIS************************************I*********************************************************************************************************************************************YACPVENCDRRFS**DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRK*********************************************************************
Disordered Region (DISOPRED)
**********YSVLCEVGKLTDDCFVFSVA***********************************************************************************************************************************ERSQQHEMLNINIECGALKQPS***************V*****HSPNNKYQWLDSPVEY************PKQEP*Y*************************VQLAEYNP****************PLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHPNMEGMPVVTTPL
Disordered Region (DISEMBL)
MSNSNRPIGTYSVLCEVGKLTDDCFVFSVAGSLE******************CQPKTELITDSPLG**************SMYPGSNPSHSDKISYRGIFTTT*************PGNNWMLTGTDKSLFPPLFISSGVLGQSNN******************QQHEMLNINIECGALK***********EQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKY**********ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFA*******************************************************NMEGMPVVTTPL
Disordered Region (DISPRO)
************VL**V**LTDDCFVFSVA*SLETEELSVGSP**KDDSGELCQPK*ELITDSPLGLHEEEEETSLSSTISMY************************SHQP*AASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHPNMEGMPV**TPL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSNSNRPIGTYSVLCEVGKLTDDCFVFSVAGSLETEELSVGSPSTKDDSGELCQPKTELITDSPLGLHEEEEETSLSSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQPGAASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHPNMEGMPVVTTPL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	451	2.2.26 [Sep-21-2011]
P26632	511	Early growth response pro	no	N/A	0.303	0.268	0.716	2e-57
P43301	387	Early growth response pro	yes	N/A	0.257	0.299	0.836	2e-57
P43300	387	Early growth response pro	yes	N/A	0.257	0.299	0.836	2e-57
Q06889	387	Early growth response pro	yes	N/A	0.257	0.299	0.836	2e-57
P08046	533	Early growth response pro	no	N/A	0.257	0.217	0.827	2e-57
A4II20	498	Early growth response pro	yes	N/A	0.286	0.259	0.744	3e-57
Q6NTY6	475	Early growth response pro	N/A	N/A	0.286	0.271	0.744	4e-57
P18146	543	Early growth response pro	no	N/A	0.250	0.208	0.840	5e-57
P08154	508	Early growth response pro	no	N/A	0.288	0.255	0.746	9e-57
Q6GQH4	497	Early growth response pro	N/A	N/A	0.301	0.273	0.707	1e-56

>sp|P26632|EGR1_DANRE Early growth response protein 1 OS=Danio rerio GN=egr1 PE=2 SV=2

 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/141 (71%), Positives = 114/141 (80%), Gaps = 4/141 (2%)

Query: 273 STSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDE 332
           +T  G + L  VYQ       + P + RKYPNRPSKTP HERPYACPVE CDRRFSRSDE
Sbjct: 272 ATQTGSQDLKSVYQSQ----LIKPSRMRKYPNRPSKTPPHERPYACPVETCDRRFSRSDE 327

Query: 333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH 392
           LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+C++CGRKFARSDE+KRH
Sbjct: 328 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACEICGRKFARSDERKRH 387

Query: 393 AKVHLKQRSKKESKMAVMMSQ 413
            K+H++Q+ KK  K A    Q
Sbjct: 388 TKIHMRQKDKKAEKGATAAVQ 408

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.
Danio rerio (taxid: 7955)

>sp|P43301|EGR3_RAT Early growth response protein 3 OS=Rattus norvegicus GN=Egr3 PE=2 SV=1

 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 107/116 (92%)

Query: 291 PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI 350
           PL L P++PRKYPNRPSKTP+HERP+ACP E CDRRFSRSDELTRH+RIHTG KPFQCRI
Sbjct: 250 PLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRI 309

Query: 351 CMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
           CMRSFSRSDHLTTHIRTHTGEKPF+C+ CGRKFARSDE+KRHAK+HLKQ+ KK  K
Sbjct: 310 CMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKSEK 365

Probable transcription factor involved in muscle spindle development.

Rattus norvegicus (taxid: 10116)

>sp|P43300|EGR3_MOUSE Early growth response protein 3 OS=Mus musculus GN=Egr3 PE=2 SV=2

 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 107/116 (92%)

Query: 291 PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI 350
           PL L P++PRKYPNRPSKTP+HERP+ACP E CDRRFSRSDELTRH+RIHTG KPFQCRI
Sbjct: 250 PLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRI 309

Query: 351 CMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
           CMRSFSRSDHLTTHIRTHTGEKPF+C+ CGRKFARSDE+KRHAK+HLKQ+ KK  K
Sbjct: 310 CMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKSEK 365

Probable transcription factor involved in muscle spindle development.

Mus musculus (taxid: 10090)

>sp|Q06889|EGR3_HUMAN Early growth response protein 3 OS=Homo sapiens GN=EGR3 PE=1 SV=1

 Score =  223 bits (569), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 97/116 (83%), Positives = 107/116 (92%)

Query: 291 PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI 350
           PL L P++PRKYPNRPSKTP+HERP+ACP E CDRRFSRSDELTRH+RIHTG KPFQCRI
Sbjct: 250 PLTLKPIRPRKYPNRPSKTPLHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCRI 309

Query: 351 CMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
           CMRSFSRSDHLTTHIRTHTGEKPF+C+ CGRKFARSDE+KRHAK+HLKQ+ KK  K
Sbjct: 310 CMRSFSRSDHLTTHIRTHTGEKPFACEFCGRKFARSDERKRHAKIHLKQKEKKAEK 365

Probable transcription factor involved in muscle spindle development.

Homo sapiens (taxid: 9606)

>sp|P08046|EGR1_MOUSE Early growth response protein 1 OS=Mus musculus GN=Egr1 PE=1 SV=2

 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 96/116 (82%), Positives = 106/116 (91%)

Query: 294 LVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 353
           + P + RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR
Sbjct: 314 IKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 373

Query: 354 SFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAV 409
           +FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K  V
Sbjct: 374 NFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVV 429

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Mus musculus (taxid: 10090)

>sp|A4II20|EGR1_XENTR Early growth response protein 1 OS=Xenopus tropicalis GN=egr1 PE=2 SV=2

 Score =  223 bits (567), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 99/133 (74%), Positives = 113/133 (84%), Gaps = 4/133 (3%)

Query: 274 TSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDEL 333
           TS+  + ++  YQ       + P + RKYPNRPSKTP HERPYACPVE+CDRRFSRSDEL
Sbjct: 269 TSQDLKTINSTYQSQ----IIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDEL 324

Query: 334 TRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA 393
           TRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH 
Sbjct: 325 TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 384

Query: 394 KVHLKQRSKKESK 406
           K+HL+Q+ KK  K
Sbjct: 385 KIHLRQKDKKADK 397

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Xenopus tropicalis (taxid: 8364)

>sp|Q6NTY6|EGR1B_XENLA Early growth response protein 1-B OS=Xenopus laevis GN=egr1-b PE=2 SV=1

 Score =  222 bits (566), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 99/133 (74%), Positives = 113/133 (84%), Gaps = 4/133 (3%)

Query: 274 TSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDEL 333
           TS+  + ++  YQ       + P + RKYPNRPSKTP HERPYACPVE+CDRRFSRSDEL
Sbjct: 246 TSQDLKTINSTYQSQ----IIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDEL 301

Query: 334 TRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA 393
           TRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH 
Sbjct: 302 TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 361

Query: 394 KVHLKQRSKKESK 406
           K+HL+Q+ KK  K
Sbjct: 362 KIHLRQKDKKADK 374

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Xenopus laevis (taxid: 8355)

>sp|P18146|EGR1_HUMAN Early growth response protein 1 OS=Homo sapiens GN=EGR1 PE=1 SV=1

 Score =  222 bits (565), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 95/113 (84%), Positives = 105/113 (92%)

Query: 294 LVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 353
           + P + RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR
Sbjct: 316 IKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 375

Query: 354 SFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
           +FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K
Sbjct: 376 NFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADK 428

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Homo sapiens (taxid: 9606)

>sp|P08154|EGR1_RAT Early growth response protein 1 OS=Rattus norvegicus GN=Egr1 PE=1 SV=2

 Score =  221 bits (563), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 100/134 (74%), Positives = 113/134 (84%), Gaps = 4/134 (2%)

Query: 273 STSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDE 332
           S S+  + L+  YQ       + P + RKYPNRPSKTP HERPYACPVE+CDRRFSRSDE
Sbjct: 272 SGSQDLKALNNTYQSQ----LIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDE 327

Query: 333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH 392
           LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH
Sbjct: 328 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 387

Query: 393 AKVHLKQRSKKESK 406
            K+HL+Q+ KK  K
Sbjct: 388 TKIHLRQKDKKADK 401

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Rattus norvegicus (taxid: 10116)

>sp|Q6GQH4|EGR1A_XENLA Early growth response protein 1-A OS=Xenopus laevis GN=egr1-a PE=2 SV=1

 Score =  221 bits (562), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 4/140 (2%)

Query: 267 LAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRR 326
           +  Y   TS+  + ++  YQ       + P + RKYPNRPSKTP HERPY CPVE+CDRR
Sbjct: 261 IKAYATHTSQDLKTINSTYQSQ----IIKPSRMRKYPNRPSKTPPHERPYGCPVESCDRR 316

Query: 327 FSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS 386
           FSRSDELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARS
Sbjct: 317 FSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 376

Query: 387 DEKKRHAKVHLKQRSKKESK 406
           DE+KRH K+HL+Q+ KK  K
Sbjct: 377 DERKRHTKIHLRQKDKKADK 396

Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
242010839	472	Early growth response protein, putative	0.707	0.675	0.598	1e-101
328708213	688	PREDICTED: hypothetical protein LOC10015	0.738	0.484	0.568	2e-99
270002538	772	hypothetical protein TcasGA2_TC004846 [T	0.725	0.423	0.581	5e-98
189234146	845	PREDICTED: similar to conserved hypothet	0.725	0.386	0.581	8e-98
170048318	760	conserved hypothetical protein [Culex qu	0.807	0.478	0.505	2e-96
347968524	1108	AGAP002773-PB [Anopheles gambiae str. PE	0.898	0.365	0.421	9e-89
347968526	799	AGAP002773-PA [Anopheles gambiae str. PE	0.898	0.506	0.421	5e-88
198455353	1219	GA27565 [Drosophila pseudoobscura pseudo	0.698	0.258	0.494	2e-87
195570007	1019	GD19200 [Drosophila simulans] gi|1941989	0.696	0.308	0.498	4e-87
194900306	1243	GG22637 [Drosophila erecta] gi|190651401	0.694	0.251	0.493	1e-86

>gi|242010839|ref|XP_002426166.1| Early growth response protein, putative [Pediculus humanus corporis] gi|212510213|gb|EEB13428.1| Early growth response protein, putative [Pediculus humanus corporis]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/366 (59%), Positives = 254/366 (69%), Gaps = 47/366 (12%)

Query: 73  ETSLSSTISMYPG-SNPSHSDKISYRGIFTTTNSSP-----SHQPGAASSPG----NNWM 122
           E S S++ +M+PG  + S   KISYRG+FTTT +SP        PG + SP     N+W+
Sbjct: 57  EDSCSNSSTMFPGHESQSQQGKISYRGVFTTTGASPLSISSGQLPGLSPSPTPGGINHWL 116

Query: 123 LTGTDKSLFPPLFISSGVLGQSNNSNQGPY----SGSSPSHYDERSQQ-HEMLNINIECG 177
           L   DK+LFPP+F   G+LGQ       P     +GS   HY++RSQQ HE+L + ++  
Sbjct: 117 LPSPDKTLFPPIF---GLLGQQQPGQSSPQQYHATGSPTGHYEDRSQQQHELLGLGLDNL 173

Query: 178 ALKQPSSSYSSCS-------------GEQDVYARVNQSLMHSPNNKYQWLDSP-VEYSAS 223
           ALKQP S YSSCS              +     RV+QSL      KY WLDS  V+Y + 
Sbjct: 174 ALKQPPS-YSSCSVPTSSGLPMNEVQPDLSYSTRVSQSL--GSGAKYHWLDSQNVDYGSQ 230

Query: 224 I-VQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILS 282
           + V    G++PK+EP    ++          S+     S + VQLAEYN STSKGHEILS
Sbjct: 231 LHVPGPSGVVPKEEPYTSTSS----------SEVVQGQSQFSVQLAEYNVSTSKGHEILS 280

Query: 283 QVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTG 342
           QVYQQ+ +PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTG
Sbjct: 281 QVYQQTHMPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTG 340

Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSK 402
           QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR K
Sbjct: 341 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR-K 399

Query: 403 KESKMA 408
           KESK+A
Sbjct: 400 KESKLA 405

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328708213|ref|XP_001943786.2| PREDICTED: hypothetical protein LOC100159519 [Acyrthosiphon pisum]

 Score =  369 bits (947), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 221/389 (56%), Positives = 256/389 (65%), Gaps = 56/389 (14%)

Query: 54  QPKTELITDSPLGLHEEEEETSLSSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQP-- 111
           Q KTE I   P      E++ +    +     S PS   +ISYR    +TNS     P  
Sbjct: 276 QLKTEAIGGEP------EQDDAGQDVMYTTNSSIPSGQSRISYR---FSTNSPMQTAPCS 326

Query: 112 ------GAASSPGNNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQ 165
                    +    +W+L   DK++FPPLF    +L    +S    Y  SSP HY++RSQ
Sbjct: 327 TSSSNNNNNNHLSTSWLLPSPDKNIFPPLF---NLLQPQPSSTPTSYHSSSP-HYEDRSQ 382

Query: 166 QH--EMLNINIECGALKQPSSSYSSCS---GEQDVYARVNQSLMH---SPNNKYQWLDSP 217
           Q   E+L ++I+CG  KQ   +Y+SC     +QD+       +M    SP NKY WLDSP
Sbjct: 383 QSQVELLGMSIDCG--KQAPPTYASCGVTGNDQDLIYHNRGQMMQQQSSPVNKYHWLDSP 440

Query: 218 VEYSASIVQAQPG--------IIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSS------Y 263
           VEY     Q Q          +IPKQE     TN+      VN+ D  +PGSS      Y
Sbjct: 441 VEYGGQQQQQQQQQLQSQQQQMIPKQE----FTNV------VNV-DVQSPGSSSVSQGGY 489

Query: 264 PVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENC 323
            VQLAEYNPSTSKGHEILSQVYQQS LPLKLVPVKPRKYPNRPSKTPVHERPYACPVE+C
Sbjct: 490 SVQLAEYNPSTSKGHEILSQVYQQSSLPLKLVPVKPRKYPNRPSKTPVHERPYACPVEHC 549

Query: 324 DRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKF 383
           DRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPF+CDVCGRKF
Sbjct: 550 DRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFTCDVCGRKF 609

Query: 384 ARSDEKKRHAKVHLKQRSKKESKMAVMMS 412
           ARSDEKKRHAKVHLKQR+KKE+KMA +++
Sbjct: 610 ARSDEKKRHAKVHLKQRTKKETKMAALLA 638

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002538|gb|EEZ98985.1| hypothetical protein TcasGA2_TC004846 [Tribolium castaneum]

 Score =  364 bits (935), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 217/373 (58%), Positives = 250/373 (67%), Gaps = 46/373 (12%)

Query: 62  DSPLGLHEEEEETSLSSTISMYPGSNPSHSD---KISYRGIFTTTNSSPSHQ-------- 110
           DS L     EEE +  ST+SMYP +  SH++   K+ +R ++T+  SSP+          
Sbjct: 381 DSALSPSLREEENTNHSTLSMYP-TGTSHANNMGKMHHRTVYTSA-SSPNMSGNIQMQSV 438

Query: 111 PGAASSPG--NNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHE 168
            G A SP   N W+L+  DK ++P +F   G     +   Q P +  SP+       Q+E
Sbjct: 439 EGMAHSPSTVNPWLLSSGDKPIYPAMFGLLGQGSSQSPQQQYPSATPSPA-----GTQYE 493

Query: 169 MLNINIECGALKQPSSSYSSCSGEQD-----------VYARVNQSLMHSPNNKYQWLD-- 215
              ++++CG LKQP S Y SCS               VY+RV Q L+ S   KYQW    
Sbjct: 494 EQLMSMDCG-LKQPPS-YPSCSASTSLQLELQQQQDLVYSRVGQPLVAS-TAKYQWDSQE 550

Query: 216 -SPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPST 274
            SP   SA +V +   ++PKQEP       +GC S +         SSY VQLAEYNPST
Sbjct: 551 YSPQSSSALVVPSTSNLVPKQEPFS-----AGCSSEIG----QQSNSSYGVQLAEYNPST 601

Query: 275 SKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT 334
           SKGHEILSQVYQQSP+PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT
Sbjct: 602 SKGHEILSQVYQQSPVPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT 661

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK 394
           RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK
Sbjct: 662 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK 721

Query: 395 VHLKQRSKKESKM 407
           VHLKQR KKESKM
Sbjct: 722 VHLKQRMKKESKM 734

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234146|ref|XP_970833.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score =  363 bits (933), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 217/373 (58%), Positives = 250/373 (67%), Gaps = 46/373 (12%)

Query: 62  DSPLGLHEEEEETSLSSTISMYPGSNPSHSD---KISYRGIFTTTNSSPSHQ-------- 110
           DS L     EEE +  ST+SMYP +  SH++   K+ +R ++T+  SSP+          
Sbjct: 454 DSALSPSLREEENTNHSTLSMYP-TGTSHANNMGKMHHRTVYTSA-SSPNMSGNIQMQSV 511

Query: 111 PGAASSPG--NNWMLTGTDKSLFPPLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHE 168
            G A SP   N W+L+  DK ++P +F   G     +   Q P +  SP+       Q+E
Sbjct: 512 EGMAHSPSTVNPWLLSSGDKPIYPAMFGLLGQGSSQSPQQQYPSATPSPA-----GTQYE 566

Query: 169 MLNINIECGALKQPSSSYSSCSGEQD-----------VYARVNQSLMHSPNNKYQWLD-- 215
              ++++CG LKQP S Y SCS               VY+RV Q L+ S   KYQW    
Sbjct: 567 EQLMSMDCG-LKQPPS-YPSCSASTSLQLELQQQQDLVYSRVGQPLVAS-TAKYQWDSQE 623

Query: 216 -SPVEYSASIVQAQPGIIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPST 274
            SP   SA +V +   ++PKQEP       +GC S +         SSY VQLAEYNPST
Sbjct: 624 YSPQSSSALVVPSTSNLVPKQEPFS-----AGCSSEIG----QQSNSSYGVQLAEYNPST 674

Query: 275 SKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT 334
           SKGHEILSQVYQQSP+PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT
Sbjct: 675 SKGHEILSQVYQQSPVPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELT 734

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK 394
           RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK
Sbjct: 735 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK 794

Query: 395 VHLKQRSKKESKM 407
           VHLKQR KKESKM
Sbjct: 795 VHLKQRMKKESKM 807

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048318|ref|XP_001851900.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167870416|gb|EDS33799.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  358 bits (920), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 236/467 (50%), Positives = 272/467 (58%), Gaps = 103/467 (22%)

Query: 29  VAGSLETEELSVGSPSTKDDSGELCQP-KTELITDSPLGLHEEEEETSLSSTISMYP--- 84
           + GS+E+++LS+   +       LC P K E  T   + +   EEE S +S+ +MYP   
Sbjct: 196 ITGSIESDDLSLEPQTVSSPCASLCSPTKQERSTPQSIVI---EEEASNTSSNAMYPVTT 252

Query: 85  ----------------------------GSNPSHSDKISYRGIFTTT-NSSPSHQPGAAS 115
                                        S  +   KISYRGIFTTT  +S   Q  A S
Sbjct: 253 GIGSGHHQTVTQSSSHHSNSGSQQEMHDQSMEAEESKISYRGIFTTTAGASMGLQTAAVS 312

Query: 116 S------PG--------NNWMLTGTDKSLF-PPLFISSGVLG------------------ 142
                  PG        + W L   DKSLF PP+F   G+LG                  
Sbjct: 313 GSQLSLMPGQMSPTSGLSGWGLPSPDKSLFQPPMF---GLLGPGPQSSAQAHFAAAQQSA 369

Query: 143 --QSNNSNQGPYSGSSPSHYDERSQQH-EMLNINIECGA--LKQPSSSYSSCSGEQDV-- 195
                 S  G +  SS  HYDER+ Q  E+L +N++C +  LKQP S Y+SC    D+  
Sbjct: 370 NSAQTPSPAGHHQHSS-HHYDERTHQSVELLGLNMDCPSIILKQPPS-YASCISSLDMQQ 427

Query: 196 ---------YARVNQSLMHSPNNKYQWLDSPVEYSA---SIVQAQPGIIP------KQEP 237
                    Y+R +Q L      KYQWLDSPVEY +   S+V   P          KQEP
Sbjct: 428 QQQAQEMHQYSR-SQGLGMGQTPKYQWLDSPVEYGSPQHSVVIPGPSSSSSTGIIPKQEP 486

Query: 238 VYGNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPV 297
            Y +  L     L  L+      + Y VQLAEYNPSTSKGHEIL+QVYQQSP+PLKLVPV
Sbjct: 487 -YSSAQLPDPSQLSQLTPQQQ--AQYAVQLAEYNPSTSKGHEILNQVYQQSPMPLKLVPV 543

Query: 298 KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR 357
           KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR
Sbjct: 544 KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR 603

Query: 358 SDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
           SDHLTTHIRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KKE
Sbjct: 604 SDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 650

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968524|ref|XP_003436239.1| AGAP002773-PB [Anopheles gambiae str. PEST] gi|333467965|gb|EGK96774.1| AGAP002773-PB [Anopheles gambiae str. PEST]

 Score =  333 bits (855), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 240/570 (42%), Positives = 291/570 (51%), Gaps = 165/570 (28%)

Query: 29   VAGSLETEELSVGSPSTKDDSGELCQPKTELITDSPLGLHEEEEETSLSSTISMYP---- 84
            + GS+E+++LS+   +       LC P T+    +P  +  EEE ++ SST +MYP    
Sbjct: 542  ITGSIESDDLSLEPQTVSSPCVSLCSP-TKQERSTPQSIVNEEEASNTSSTNTMYPSSGA 600

Query: 85   ------------------------------------GSNPSHS------------DKISY 96
                                                G++  H             +KI+Y
Sbjct: 601  QQQQQQQQQQQQQQQQQQQHSLHGQIRVAGLASVTGGADMQHGSNDGVQSSDAIENKIAY 660

Query: 97   RGIFTTTNS-SPSHQPGAASSPGN---------NWMLTGTDKSLF-PPLFISSGVLG-QS 144
            RGIFT++ S S   Q G   +             W L   DK+LF  P+F   G+LG Q+
Sbjct: 661  RGIFTSSGSPSMGLQAGNVMAGAGQMSPTAGLGGWGLPSPDKTLFQAPMF---GLLGPQA 717

Query: 145  NNSNQGPYSGSSPS-------HY--DERSQQH---------EMLNINIECGA--LKQPSS 184
             +++QG  S +SPS       HY  DER             E+L +N++C +  LKQP S
Sbjct: 718  TSASQG-VSATSPSIGQHHQHHYGGDERGHTGAGHGGGHGAELLGLNMDCASIILKQPPS 776

Query: 185  SYSSCSGEQDV--------YARVNQS--LMHSPNNKYQWLDSPVE------YSASIVQAQ 228
             Y+SC G  D+        Y R  Q   L    + KYQWLDSPV+         S+V   
Sbjct: 777  -YNSCVGSLDMQQGQDMHGYGRPGQGAGLGQQMSQKYQWLDSPVDPYVGSPQHGSVVLPG 835

Query: 229  PG--------IIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLA----------EY 270
            P         IIPKQEP Y   N   C      SD +  G   P Q+A          EY
Sbjct: 836  PSSTPISVGPIIPKQEP-YSTPN--AC-----TSDSSQLGGLTPAQVAQQAQYAVQLAEY 887

Query: 271  NPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS 330
            N +TSKGHEILSQVYQQS +PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS
Sbjct: 888  NQATSKGHEILSQVYQQSTMPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS 947

Query: 331  DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKK 390
            DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD+CGRKFARSDEKK
Sbjct: 948  DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKK 1007

Query: 391  RHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQ---------------------------- 422
            RHAKVHLKQR KKE   +   +   +                                  
Sbjct: 1008 RHAKVHLKQRIKKEKNSSSGGNSANSNNSSASAAHHTHHAQQQQQQQQQQQHHHQQQQQH 1067

Query: 423  -----NHVHQQQQHHHHHHHHPNMEGMPVV 447
                 +H      H HH   H ++ G+P+V
Sbjct: 1068 HQQLGHHPGHPGLHAHHLLTHDDLTGIPIV 1097

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968526|ref|XP_312150.5| AGAP002773-PA [Anopheles gambiae str. PEST] gi|333467964|gb|EAA44878.5| AGAP002773-PA [Anopheles gambiae str. PEST]

 Score =  331 bits (848), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 240/570 (42%), Positives = 291/570 (51%), Gaps = 165/570 (28%)

Query: 29  VAGSLETEELSVGSPSTKDDSGELCQPKTELITDSPLGLHEEEEETSLSSTISMYP---- 84
           + GS+E+++LS+   +       LC P T+    +P  +  EEE ++ SST +MYP    
Sbjct: 233 ITGSIESDDLSLEPQTVSSPCVSLCSP-TKQERSTPQSIVNEEEASNTSSTNTMYPSSGA 291

Query: 85  ------------------------------------GSNPSHS------------DKISY 96
                                               G++  H             +KI+Y
Sbjct: 292 QQQQQQQQQQQQQQQQQQQHSLHGQIRVAGLASVTGGADMQHGSNDGVQSSDAIENKIAY 351

Query: 97  RGIFTTTNS-SPSHQPGAASSPGN---------NWMLTGTDKSLF-PPLFISSGVLG-QS 144
           RGIFT++ S S   Q G   +             W L   DK+LF  P+F   G+LG Q+
Sbjct: 352 RGIFTSSGSPSMGLQAGNVMAGAGQMSPTAGLGGWGLPSPDKTLFQAPMF---GLLGPQA 408

Query: 145 NNSNQGPYSGSSPS-------HY--DERSQQH---------EMLNINIECGA--LKQPSS 184
            +++QG  S +SPS       HY  DER             E+L +N++C +  LKQP S
Sbjct: 409 TSASQG-VSATSPSIGQHHQHHYGGDERGHTGAGHGGGHGAELLGLNMDCASIILKQPPS 467

Query: 185 SYSSCSGEQDV--------YARVNQS--LMHSPNNKYQWLDSPVE------YSASIVQAQ 228
            Y+SC G  D+        Y R  Q   L    + KYQWLDSPV+         S+V   
Sbjct: 468 -YNSCVGSLDMQQGQDMHGYGRPGQGAGLGQQMSQKYQWLDSPVDPYVGSPQHGSVVLPG 526

Query: 229 PG--------IIPKQEPVYGNTNLSGCGSLVNLSDPNNPGSSYPVQLA----------EY 270
           P         IIPKQEP Y   N   C      SD +  G   P Q+A          EY
Sbjct: 527 PSSTPISVGPIIPKQEP-YSTPN--AC-----TSDSSQLGGLTPAQVAQQAQYAVQLAEY 578

Query: 271 NPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS 330
           N +TSKGHEILSQVYQQS +PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS
Sbjct: 579 NQATSKGHEILSQVYQQSTMPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRS 638

Query: 331 DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKK 390
           DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD+CGRKFARSDEKK
Sbjct: 639 DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKK 698

Query: 391 RHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQ---------------------------- 422
           RHAKVHLKQR KKE   +   +   +                                  
Sbjct: 699 RHAKVHLKQRIKKEKNSSSGGNSANSNNSSASAAHHTHHAQQQQQQQQQQQHHHQQQQQH 758

Query: 423 -----NHVHQQQQHHHHHHHHPNMEGMPVV 447
                +H      H HH   H ++ G+P+V
Sbjct: 759 HQQLGHHPGHPGLHAHHLLTHDDLTGIPIV 788

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198455353|ref|XP_002138058.1| GA27565 [Drosophila pseudoobscura pseudoobscura] gi|198133209|gb|EDY68616.1| GA27565 [Drosophila pseudoobscura pseudoobscura]

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 209/423 (49%), Positives = 239/423 (56%), Gaps = 108/423 (25%)

Query: 91   SDKISYRGIFTTTNSS-----------------------------PSHQ----PGAASSP 117
            + KISYRGIFTTT ++                             PS Q    PG  S P
Sbjct: 735  TGKISYRGIFTTTGNAMNAAAAAAAAQQQQQQHQAQQQQQQQQQLPSPQLSVLPGQMSPP 794

Query: 118  ----GNNWMLTGTDKSLF-PPLFISSGVLGQSNNSNQGPY----SGSSPSHYDE------ 162
                GN+W L   DKSLF PP+F     + Q     Q       +G++PS YD+      
Sbjct: 795  SNSLGNSWGLPSPDKSLFQPPMFAHYATMQQQQQQQQQQQQQQAAGATPSPYDDGRAAAA 854

Query: 163  --RSQQHEMLNINIECG--ALKQPSSSYSSCSGEQDVYA-------------------RV 199
               +Q  E+L ++++C    LKQP  +Y+  S     +A                    V
Sbjct: 855  AAAAQHAELLGLSMDCTPLLLKQPPPTYAGPSVSTAGFASLAELQSSHDQLQQQQQQYAV 914

Query: 200  NQSLMHSPNNKYQWLDSPVEYSASIVQAQ-------------PG--------------II 232
               L      KYQWLDSP +Y+      Q             PG              +I
Sbjct: 915  RSQLSSVSTPKYQWLDSPADYAPQQQVQQVQQVQQQQQNLVLPGPTSSASSSNAALGVLI 974

Query: 233  PKQEPVYGNT--NLSGCG-------SLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQ 283
            PKQE  Y +   N +G G       S    +      ++  VQLAEY+PSTSKGHEILSQ
Sbjct: 975  PKQE-TYPDMQPNSNGTGYSGASGGSAAAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQ 1033

Query: 284  VYQQSPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ 343
            VYQQS +PLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ
Sbjct: 1034 VYQQSTVPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ 1093

Query: 344  KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK 403
            KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KK
Sbjct: 1094 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKK 1153

Query: 404  ESK 406
            ESK
Sbjct: 1154 ESK 1156

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195570007|ref|XP_002103000.1| GD19200 [Drosophila simulans] gi|194198927|gb|EDX12503.1| GD19200 [Drosophila simulans]

 Score =  328 bits (841), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 202/405 (49%), Positives = 237/405 (58%), Gaps = 91/405 (22%)

Query: 91  SDKISYRGIFTTTNSS-----------------------PSHQPGAASSP--------GN 119
           + KISYRGIFTTT ++                       PS Q G  + P        GN
Sbjct: 552 ASKISYRGIFTTTGNAMNAAAAAAAAAAQQQHQQQQQQLPSPQLGVLAGPMSPPSNSLGN 611

Query: 120 NWMLTGTDKSLF-PPLF---------ISSGVLGQSNNSNQGPYSGSSPSHYDE------- 162
           +W L   DK++F PPLF                Q     Q   +G++PS YD+       
Sbjct: 612 SWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQAAGAAPSPYDDGRAAAAA 671

Query: 163 RSQQHEMLNINIECG--ALKQPSSSYSSCS----GEQDVYA----RVNQSLMHSPNNKYQ 212
            +Q  E+L + ++C    LKQP  +Y+  S    G  D+++    ++ Q        KYQ
Sbjct: 672 AAQHAELLGLTMDCTPLLLKQPPPTYAGASAGFPGLGDLHSSHEQQLQQQQYVRSQPKYQ 731

Query: 213 WLDSPVEYSA---------------SIVQAQPG------------IIPKQE------PVY 239
           WLDSP +Y+                ++V   P             +IPKQE      P  
Sbjct: 732 WLDSPADYAQQQQQVQQVQQQQQQQTLVLPGPTSSASSSNAALGVLIPKQENYPDMQPSS 791

Query: 240 GNTNLSGCGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKP 299
             T  SG     + +      ++  VQLAEY+PSTSKGHEILSQVYQQS +PLKLVPVKP
Sbjct: 792 NGTGYSGGSGGSSAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPLKLVPVKP 851

Query: 300 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD 359
           RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD
Sbjct: 852 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD 911

Query: 360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
           HLTTHIRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KKE
Sbjct: 912 HLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 956

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194900306|ref|XP_001979698.1| GG22637 [Drosophila erecta] gi|190651401|gb|EDV48656.1| GG22637 [Drosophila erecta]

 Score =  326 bits (836), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/407 (49%), Positives = 237/407 (58%), Gaps = 94/407 (23%)

Query: 91   SDKISYRGIFTTTNSS-----------------------PSHQPGAASSP--------GN 119
            + KISYRGIFTTT ++                       PS Q G  + P        GN
Sbjct: 720  ASKISYRGIFTTTGNAMNAAAAAAAAAAQQQHQQQQQQLPSPQLGVLAGPMSPPSNSLGN 779

Query: 120  NWMLTGTDKSLF-PPLF----------ISSGVLGQSNNSNQGPYSGSSPSHYDE------ 162
            +W L   DK++F PPLF                 Q     Q   +G++PS YD+      
Sbjct: 780  SWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQAAGAAPSPYDDGRAAAA 839

Query: 163  RSQQHEMLNINIECG--ALKQPSSSYSSCS----GEQDVYA----RVNQSLMHSPNNKYQ 212
             +Q  E+L + ++C    LKQP  +Y+  S    G  D+++    ++ Q        KYQ
Sbjct: 840  AAQHAELLGLTMDCTPLLLKQPPPTYAGASAGFPGLGDLHSSHEQQLQQQQYVRSQPKYQ 899

Query: 213  WLDSPVEYSA---------------SIVQAQPG------------IIPKQEPVYGNTNLS 245
            WLDSP +Y+                ++V   P             +IPKQE  Y +   S
Sbjct: 900  WLDSPADYAQQQQQQVQQVQQQQQQTLVLPGPTSSASSSNAALGVLIPKQE-SYPDMQPS 958

Query: 246  GCGS--------LVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPV 297
              G+            +      ++  VQLAEY+PSTSKGHEILSQVYQQS +PLKLVPV
Sbjct: 959  SNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPLKLVPV 1018

Query: 298  KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR 357
            KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR
Sbjct: 1019 KPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR 1078

Query: 358  SDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
            SDHLTTHIRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KKE
Sbjct: 1079 SDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 1125

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	451
UNIPROTKB|Q26452	512	sr "Sr protein" [Drosophila sp	0.585	0.515	0.560	3.7e-74
FB|FBgn0003499	1186	sr "stripe" [Drosophila melano	0.585	0.222	0.560	1.9e-72
UNIPROTKB|Q6GQH4	497	egr1-a "Early growth response	0.609	0.553	0.439	1.4e-55
UNIPROTKB|Q6NTY6	475	egr1-b "Early growth response	0.603	0.572	0.445	3.7e-55
UNIPROTKB|A4II20	498	egr1 "Early growth response pr	0.596	0.540	0.452	3.4e-54
ZFIN|ZDB-GENE-040718-394	422	zgc:92020 "zgc:92020" [Danio r	0.789	0.843	0.388	4.3e-54
ZFIN|ZDB-GENE-980526-320	511	egr1 "early growth response 1"	0.614	0.542	0.426	1.5e-53
UNIPROTKB|P18146	543	EGR1 "Early growth response pr	0.250	0.208	0.849	3e-53
RGD|2544	508	Egr1 "early growth response 1"	0.250	0.222	0.849	3e-53
UNIPROTKB|G3V8I9	536	Egr1 "Early growth response pr	0.250	0.210	0.849	3e-53

UNIPROTKB|Q26452 sr "Sr protein" [Drosophila sp. (taxid:7242)]

 Score = 697 (250.4 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
 Identities = 157/280 (56%), Positives = 177/280 (63%)

Query:   133 PLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGE 192
             PL +       +  S   P  G   S ++++ QQ + +    +   L  P+  Y+    +
Sbjct:   181 PLLLKQPPPSYAGASAGFPGLGDLHSSHEQQLQQQQYVRSQPKYQWLDSPAD-YAQ---Q 236

Query:   193 QDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGI-IPKQE------PVYGNTNLS 245
             Q    +V Q        +   L  P   SAS   A  G+ IPKQE      P    T  S
Sbjct:   237 QQQVQQVQQQ---QQQQQTLVLPGPTS-SASSSNAALGVLIPKQENYPDMQPSSNGTGYS 292

Query:   246 G-CGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSXXXXXXXXXXXRKYPN 304
             G  G     +      ++  VQLAEY+PSTSKGHEILSQVYQQS           RKYPN
Sbjct:   293 GGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPLKLVPVKPRKYPN 352

Query:   305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH 364
             RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH
Sbjct:   353 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH 412

Query:   365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
             IRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KKE
Sbjct:   413 IRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 452

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0007390 "germ-band shortening" evidence=IMP

GO:0007398 "ectoderm development" evidence=IMP

GO:0007417 "central nervous system development" evidence=IMP

GO:0007427 "epithelial cell migration, open tracheal system" evidence=IGI;IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0007525 "somatic muscle development" evidence=IMP

GO:0016204 "determination of muscle attachment site" evidence=TAS

GO:0042440 "pigment metabolic process" evidence=TAS

FB|FBgn0003499 sr "stripe" [Drosophila melanogaster (taxid:7227)]

 Score = 697 (250.4 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
 Identities = 157/280 (56%), Positives = 177/280 (63%)

Query:   133 PLFISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGE 192
             PL +       +  S   P  G   S ++++ QQ + +    +   L  P+  Y+    +
Sbjct:   853 PLLLKQPPPSYAGASAGFPGLGDLHSSHEQQLQQQQYVRSQPKYQWLDSPAD-YAQ---Q 908

Query:   193 QDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGI-IPKQE------PVYGNTNLS 245
             Q    +V Q        +   L  P   SAS   A  G+ IPKQE      P    T  S
Sbjct:   909 QQQVQQVQQQ---QQQQQTLVLPGPTS-SASSSNAALGVLIPKQENYPDMQPSSNGTGYS 964

Query:   246 G-CGSLVNLSDPNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSXXXXXXXXXXXRKYPN 304
             G  G     +      ++  VQLAEY+PSTSKGHEILSQVYQQS           RKYPN
Sbjct:   965 GGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQSTVPLKLVPVKPRKYPN 1024

Query:   305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH 364
             RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH
Sbjct:  1025 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH 1084

Query:   365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
             IRTHTGEKPFSCD+CGRKFARSDEKKRHAKVHLKQR KKE
Sbjct:  1085 IRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKE 1124

GO:0007417 "central nervous system development" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0016204 "determination of muscle attachment site" evidence=TAS

GO:0042440 "pigment metabolic process" evidence=TAS

GO:0007427 "epithelial cell migration, open tracheal system" evidence=IGI;IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0007398 "ectoderm development" evidence=IMP

GO:0007390 "germ-band shortening" evidence=IMP

GO:0007525 "somatic muscle development" evidence=IMP

UNIPROTKB|Q6GQH4 egr1-a "Early growth response protein 1-A" [Xenopus laevis (taxid:8355)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 128/291 (43%), Positives = 170/291 (58%)

Query:   124 TGTDKSLFP-PLF-ISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQ 181
             T +  +L+P PLF + SG++G +N S     S S  S     S Q   L+ +++      
Sbjct:   114 TNSSNTLWPEPLFSLVSGLVGMANISPSSAPSSSPSSSSSSSSSQSPPLSCSVQSND-SS 172

Query:   182 P--SSSYSSCSGEQDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPG-IIPKQEPV 238
             P  S++ +  +   +++   +     + +  Y     PV  +   V   P  + P+Q+  
Sbjct:   173 PIYSAAPTFPNSSSEIFPDHSPQPFQNASIPYPPPAYPVSKTTFQVPMIPDYLFPQQQ-- 230

Query:   239 YGNTNLSGCGS--LVNLSDPNNPGSSYPVQ-LAEYNPSTSKGHEILSQVYQQSXXXXXXX 295
              G+ +L          +       S  P+  +  Y   TS+  + ++  YQ         
Sbjct:   231 -GDVSLVSADQKPFQAMESRTQQPSLTPLSTIKAYATHTSQDLKTINSTYQSQIIKPSRM 289

Query:   296 XXXXRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSF 355
                 RKYPNRPSKTP HERPY CPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+F
Sbjct:   290 ----RKYPNRPSKTPPHERPYGCPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 345

Query:   356 SRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
             SRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K
Sbjct:   346 SRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADK 396

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

UNIPROTKB|Q6NTY6 egr1-b "Early growth response protein 1-B" [Xenopus laevis (taxid:8355)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 132/296 (44%), Positives = 168/296 (56%)

Query:   126 TDKSLFP-PLF-ISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPS 183
             +  +L+P PLF + SG++G +N S+    S SSPS     S      +  + C      S
Sbjct:    88 SSNTLWPEPLFSLVSGLVGMANVSSSSAPS-SSPSSSSSSSSSSSSQSPPLSCSVQSNES 146

Query:   184 SSYSSCSGEQDVYARVNQSLM--HSPNNKYQWLDS------PVEYSASIVQAQPGIIPKQ 235
             S   S +     +   +  +   HSP   +Q   +      P  Y  S    Q  +IP  
Sbjct:   147 SPIYSAA---PTFPNSSPEMFPDHSPQ-PFQNASTASIPYPPPAYPVSKTTFQVPMIPDY 202

Query:   236 --EPVYGNTNLSGCGS--LVNLSDPNNPGSSYPVQ-LAEYNPSTSKGHEILSQVYQQSXX 290
                   G+ +L          + +     S  P+  +  +   TS+  + ++  YQ    
Sbjct:   203 LFPQQQGDVSLVSADQKPFQAMENRTQQPSLTPLSTIKAFATQTSQDLKTINSTYQSQII 262

Query:   291 XXXXXXXXXRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI 350
                      RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRI
Sbjct:   263 KPSRM----RKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI 318

Query:   351 CMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
             CMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K
Sbjct:   319 CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADK 374

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

UNIPROTKB|A4II20 egr1 "Early growth response protein 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 133/294 (45%), Positives = 171/294 (58%)

Query:   126 TDKSLFP-PLF-ISSGVLGQSNNSNQGPYSGSSPSHYDERSQQHEMLNINIECG---ALK 180
             +  +L+P PLF + SG++G +N S     S SSPS     S Q   L+ +++      + 
Sbjct:   116 SSNTLWPEPLFSLVSGLVGMANASPSSAPS-SSPSS-SSSSSQSPPLSCSVQSNDSSPIY 173

Query:   181 QPSSSYSSCSGE----QDVYARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPG-IIPKQ 235
               + ++ + S E    Q      N S    P   Y     PV  +   V   P  + P+Q
Sbjct:   174 SAAPTFPNSSPELFPDQSPQPFQNASTASIP---YPPPAYPVSKTTFQVPMIPDYLFPQQ 230

Query:   236 EPVYGNTNLSGCGS--LVNLSDPNNPGSSYPVQ-LAEYNPSTSKGHEILSQVYQQSXXXX 292
             +   G+ +L          +       S  P+  +  +   TS+  + ++  YQ      
Sbjct:   231 Q---GDVSLVSADQKPFQAMESRTQQPSLTPLSTIKAFATQTSQDLKTINSTYQSQIIKP 287

Query:   293 XXXXXXXRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICM 352
                    RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICM
Sbjct:   288 SRM----RKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICM 343

Query:   353 RSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK 406
             R+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K
Sbjct:   344 RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADK 397

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

ZFIN|ZDB-GENE-040718-394 zgc:92020 "zgc:92020" [Danio rerio (taxid:7955)]

 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 156/402 (38%), Positives = 201/402 (50%)

Query:    20 LTDDCFVFSVAGSLETEE---LSVGSPSTKDDSGELCQPKTELITDSPLGLHXXXXXTSL 76
             +T    + ++  SL  EE    S+   +  D      Q  T+ I D  +G          
Sbjct:    11 ITMSSLINTIPDSLYPEEDIPTSMNIFTNPDSISHYSQMNTDNIMDLGMGGEKGSGEIQY 70

Query:    77 SSTISMYPGSNPSHSDKISYRGIFTTTNSSPSHQPGAASSPGNNWMLTGTDKSLFPPLFI 136
              S  S   G +      ++Y G F   ++ PS   G     G+ W     D ++     +
Sbjct:    71 GSG-SFQSGRS---GQTVTYLGKFAF-DTPPSGSIG-----GSGWC---PDNNIIS--LV 115

Query:   137 SSGVLGQSNN-SNQGPYSGSSPSHYDERSQQHEMLNINIECGALKQPSSSYSSCSGEQDV 195
             S+G+LG S +  N    + SS      +S   E +           P  +YS+C GE  +
Sbjct:   116 SAGILGVSPSPGNITTQTSSSSGSMGGQSSDMEQV--------YAPPLPAYSTC-GE--I 164

Query:   196 YARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIPKQEPVYGNTNLSG-CGSLVN-- 252
             Y     +  HSP           +Y  +      G +    P Y   +  G  G + +  
Sbjct:   165 YPE-QVTFHHSPATSSSLPYPSSDYHTTSKPGMDGSLFSMIPDYNLFHHQGDVGVMEHKP 223

Query:   253 --LSDPN--NPGSSYPVQLA-------EYNPSTSKGHEILSQVYQQSXXXXXXXXXXXRK 301
                 DP   NP    P++         + +P    G + +SQ +Q S           RK
Sbjct:   224 FQTMDPIRVNPPPITPLETIRAFKDKQQIHPGFLGGQQHVSQHHQPSQTLALKPIRP-RK 282

Query:   302 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHL 361
             YPNRPSKTPVHERP+ACP ENCDRRFSRSDELTRH+RIHTG KPFQCRICMRSFSRSDHL
Sbjct:   283 YPNRPSKTPVHERPHACPAENCDRRFSRSDELTRHLRIHTGHKPFQCRICMRSFSRSDHL 342

Query:   362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK 403
             TTHIRTHTGEKPFSC+ CGRKFARSDE+KRHAKVHLKQ+ KK
Sbjct:   343 TTHIRTHTGEKPFSCEFCGRKFARSDERKRHAKVHLKQKDKK 384

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-980526-320 egr1 "early growth response 1" [Danio rerio (taxid:7955)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 130/305 (42%), Positives = 175/305 (57%)

Query:   124 TGTDKSLFP-PLF-ISSGVLGQS-------NNSNQGPYSGSSPSHYDERSQQHEMLNINI 174
             T    SL+  PLF + SG++G +       ++++Q  +  SS +     S      + ++
Sbjct:   107 TNCSNSLWAEPLFSLVSGLVGINPPPASIPSSTSQATHPSSSSTSSIPSSSSSSTSSASL 166

Query:   175 ECGALK-QPSSSYSSCSGEQDVYARVNQSLM-HSPNNKYQWLDSPVEYSASIVQAQPGII 232
              C   + +P+  YS+       Y+  +  +   S  N    + + ++YS+S   +     
Sbjct:   167 SCSVHQSEPNPIYSAAP----TYSSASPDIFPESGPNFSTTVGTSLQYSSSTYPSAKTCN 222

Query:   233 PK-QEPVYGNTNLSGCGSLVNLSDPNN-PGSSYPVQLAEYNP-------STSKGHEILSQ 283
             P    P+  +   +   S ++L  P+  P  +   Q     P       +T  G + L  
Sbjct:   223 PSFSVPMIPDYLFTQQQSEISLVPPDQKPIQTQAGQQPALTPLHTIKAFATQTGSQDLKS 282

Query:   284 VYQQSXXXXXXXXXXXRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ 343
             VYQ             RKYPNRPSKTP HERPYACPVE CDRRFSRSDELTRHIRIHTGQ
Sbjct:   283 VYQSQLIKPSRM----RKYPNRPSKTPPHERPYACPVETCDRRFSRSDELTRHIRIHTGQ 338

Query:   344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK 403
             KPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+C++CGRKFARSDE+KRH K+H++Q+ KK
Sbjct:   339 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACEICGRKFARSDERKRHTKIHMRQKDKK 398

Query:   404 ESKMA 408
               K A
Sbjct:   399 AEKGA 403

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0043010 "camera-type eye development" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P18146 EGR1 "Early growth response protein 1" [Homo sapiens (taxid:9606)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 96/113 (84%), Positives = 104/113 (92%)

Query:   300 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD 359
             RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSD
Sbjct:   322 RKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 381

Query:   360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMS 412
             HLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K  V  S
Sbjct:   382 HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVVASS 434

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000979 "RNA polymerase II core promoter sequence-specific DNA binding" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0001975 "response to amphetamine" evidence=IEA

GO:0003690 "double-stranded DNA binding" evidence=IEA

GO:0007611 "learning or memory" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0009749 "response to glucose stimulus" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0031667 "response to nutrient levels" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0034465 "response to carbon monoxide" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

GO:0042220 "response to cocaine" evidence=IEA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA

GO:0048709 "oligodendrocyte differentiation" evidence=IEA

GO:0051602 "response to electrical stimulus" evidence=IEA

GO:0060291 "long-term synaptic potentiation" evidence=IEA

GO:0071236 "cellular response to antibiotic" evidence=IEA

GO:0071260 "cellular response to mechanical stimulus" evidence=IEA

GO:0071317 "cellular response to isoquinoline alkaloid" evidence=IEA

GO:0071320 "cellular response to cAMP" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0071372 "cellular response to follicle-stimulating hormone stimulus" evidence=IEA

GO:0071383 "cellular response to steroid hormone stimulus" evidence=IEA

GO:0071455 "cellular response to hyperoxia" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071480 "cellular response to gamma radiation" evidence=IEA

GO:0071873 "response to norepinephrine stimulus" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0071504 "cellular response to heparin" evidence=ISS

GO:0071506 "cellular response to mycophenolic acid" evidence=ISS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISS;IDA

GO:0072303 "positive regulation of glomerular metanephric mesangial cell proliferation" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0072110 "glomerular mesangial cell proliferation" evidence=ISS

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS

GO:0060337 "type I interferon-mediated signaling pathway" evidence=TAS

GO:0035035 "histone acetyltransferase binding" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA;IMP

GO:0070498 "interleukin-1-mediated signaling pathway" evidence=IMP

GO:0033233 "regulation of protein sumoylation" evidence=IDA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA

RGD|2544 Egr1 "early growth response 1" [Rattus norvegicus (taxid:10116)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 96/113 (84%), Positives = 104/113 (92%)

Query:   300 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD 359
             RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSD
Sbjct:   295 RKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 354

Query:   360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMS 412
             HLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K  V  S
Sbjct:   355 HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVVASS 407

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=ISO

GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IDA

GO:0000979 "RNA polymerase II core promoter sequence-specific DNA binding" evidence=IDA

GO:0000982 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0001975 "response to amphetamine" evidence=IEP

GO:0003677 "DNA binding" evidence=ISO

GO:0003690 "double-stranded DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;IMP

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO

GO:0007611 "learning or memory" evidence=IEP;IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009749 "response to glucose stimulus" evidence=IEA;ISO

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0010942 "positive regulation of cell death" evidence=IMP

GO:0030217 "T cell differentiation" evidence=IEA;ISO

GO:0030509 "BMP signaling pathway" evidence=IEA;ISO

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0032354 "response to follicle-stimulating hormone stimulus" evidence=IEP

GO:0032868 "response to insulin stimulus" evidence=ISO

GO:0032869 "cellular response to insulin stimulus" evidence=IEP

GO:0033233 "regulation of protein sumoylation" evidence=IEA;ISO

GO:0034465 "response to carbon monoxide" evidence=IEP

GO:0034698 "response to gonadotropin stimulus" evidence=IEP

GO:0035035 "histone acetyltransferase binding" evidence=IEA;ISO

GO:0035690 "cellular response to drug" evidence=IEP

GO:0035914 "skeletal muscle cell differentiation" evidence=ISO

GO:0042220 "response to cocaine" evidence=IEP

GO:0042493 "response to drug" evidence=IEP

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045471 "response to ethanol" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP

GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IMP

GO:0048709 "oligodendrocyte differentiation" evidence=IEP

GO:0051602 "response to electrical stimulus" evidence=IEP

GO:0060291 "long-term synaptic potentiation" evidence=IEP

GO:0070498 "interleukin-1-mediated signaling pathway" evidence=IEA;ISO

GO:0071236 "cellular response to antibiotic" evidence=IEP

GO:0071260 "cellular response to mechanical stimulus" evidence=IEP

GO:0071310 "cellular response to organic substance" evidence=ISO

GO:0071317 "cellular response to isoquinoline alkaloid" evidence=IEP

GO:0071320 "cellular response to cAMP" evidence=IEP

GO:0071363 "cellular response to growth factor stimulus" evidence=IEP

GO:0071371 "cellular response to gonadotropin stimulus" evidence=IEP

GO:0071372 "cellular response to follicle-stimulating hormone stimulus" evidence=IEP

GO:0071383 "cellular response to steroid hormone stimulus" evidence=IEP

GO:0071455 "cellular response to hyperoxia" evidence=IEP

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0071480 "cellular response to gamma radiation" evidence=IEA;ISO

GO:0071504 "cellular response to heparin" evidence=IDA

GO:0071506 "cellular response to mycophenolic acid" evidence=IDA

GO:0071873 "response to norepinephrine stimulus" evidence=IEP

GO:0072110 "glomerular mesangial cell proliferation" evidence=IMP

GO:0072303 "positive regulation of glomerular metanephric mesangial cell proliferation" evidence=IMP

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA;ISO

UNIPROTKB|G3V8I9 Egr1 "Early growth response protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 96/113 (84%), Positives = 104/113 (92%)

Query:   300 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD 359
             RKYPNRPSKTP HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSD
Sbjct:   323 RKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 382

Query:   360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMS 412
             HLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH K+HL+Q+ KK  K  V  S
Sbjct:   383 HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVVASS 435

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000976 "transcription regulatory region sequence-specific DNA binding" evidence=IEA

GO:0000982 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009749 "response to glucose stimulus" evidence=IEA

GO:0030217 "T cell differentiation" evidence=IEA

GO:0030509 "BMP signaling pathway" evidence=IEA

GO:0032868 "response to insulin stimulus" evidence=IEA

GO:0033233 "regulation of protein sumoylation" evidence=IEA

GO:0035035 "histone acetyltransferase binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0070498 "interleukin-1-mediated signaling pathway" evidence=IEA

GO:0071480 "cellular response to gamma radiation" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O73694	EGR1_SERCA	No assigned EC number	0.9491	0.1308	1.0	N/A	N/A
P26635	EGR2_POERE	No assigned EC number	0.9016	0.1352	0.9838	N/A	N/A
P26633	EGR2_CRIGR	6, ., 3, ., 2, ., -	0.9180	0.1352	0.9838	no	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	451
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	4e-06
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	6e-06
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.001

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 15/26 (57%), Positives = 20/26 (76%)

Query: 360 HLTTHIRTHTGEKPFSCDVCGRKFAR 385
           +L  H+RTHTGEKP+ C VCG+ F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 14/26 (53%), Positives = 20/26 (76%)

Query: 332 ELTRHIRIHTGQKPFQCRICMRSFSR 357
            L RH+R HTG+KP++C +C +SFS 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 40.9 bits (95), Expect = 0.001
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 301 KYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR----ICMRSFS 356
             P+R  K     +PY CPVE C++++   + L  H  +H  Q            M  FS
Sbjct: 336 DTPSRMLKV-KDGKPYKCPVEGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSPEKMNIFS 393

Query: 357 RSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK 394
             D            KP+ C+VC +++   +  K H K
Sbjct: 394 AKD------------KPYRCEVCDKRYKNLNGLKYHRK 419

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	451
KOG2462|consensus	279		99.83
KOG2462|consensus	279		99.71
KOG3576|consensus	267		99.54
KOG3623|consensus	1007		99.47
KOG3576|consensus	267		99.32
KOG3623|consensus	1007		99.21
KOG1074|consensus	958		99.2
KOG1074|consensus	958		98.98
KOG3608|consensus	467		98.94
KOG3608|consensus	467		98.93
PHA00733	128	hypothetical protein	98.85
PHA02768	55	hypothetical protein; Provisional	98.65
PLN03086	567	PRLI-interacting factor K; Provisional	98.62
PHA02768	55	hypothetical protein; Provisional	98.37
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.29
KOG3993|consensus	500		98.24
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.16
PHA00733	128	hypothetical protein	98.1
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.1
PLN03086	567	PRLI-interacting factor K; Provisional	98.05
PHA00732	79	hypothetical protein	97.87
PHA00616	44	hypothetical protein	97.73
PHA00616	44	hypothetical protein	97.63
PHA00732	79	hypothetical protein	97.48
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.34
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.96
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.83
KOG3993|consensus	500		96.68
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.6
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.19
PRK04860	160	hypothetical protein; Provisional	96.04
smart00355	26	ZnF_C2H2 zinc finger.	95.96
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.54
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.3
COG5048	467	FOG: Zn-finger [General function prediction only]	95.16
COG5048	467	FOG: Zn-finger [General function prediction only]	94.39
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.91
KOG1146|consensus	1406		93.85
PRK04860	160	hypothetical protein; Provisional	93.8
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.73
KOG4173|consensus	253		93.44
smart00355	26	ZnF_C2H2 zinc finger.	92.75
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.7
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	90.97
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.4
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	89.69
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	89.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	88.64
KOG2231|consensus	669		88.49
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.76
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	86.62
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	84.38
KOG2186|consensus	276		83.98
KOG2231|consensus	669		83.37
KOG2893|consensus	341		83.12
KOG4167|consensus	907		83.0
KOG2893|consensus	341		80.63

>KOG2462|consensus

Probab=99.83  E-value=1.1e-20  Score=184.34  Aligned_cols=138  Identities=28%  Similarity=0.490  Sum_probs=119.6

Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCCC---CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhh
Q psy677          288 SPLPLKLVPVKPRKYPNRPSKTPVH---ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH  364 (451)
Q Consensus       288 s~~p~~~~p~~~~~~p~~~skt~~~---eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H  364 (451)
                      ..++.+...-.......++..+|..   .+-|.|++  |+|.|.+-..|+.|+|+|+  -+++|.+|||.|.+.-.|..|
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            4455555555555556666666643   56789954  9999999999999999996  689999999999999999999


Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQ  429 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQqn~~~~~~  429 (451)
                      +|+|||||||.|..|+|+|+.+++|+.||.+|.+.|.|+|..|++.|+....+.+|.+.......
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~~  271 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKYL  271 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999887654433

>KOG2462|consensus

Probab=99.71  E-value=2.3e-18  Score=168.14  Aligned_cols=81  Identities=37%  Similarity=0.774  Sum_probs=76.7

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHH
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH  392 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~H  392 (451)
                      .-+++|.+  |||.|.+..-|+.|+|+|+|||||.|..|+|+|.++++|+.||.+|.+.|+|+|..|+|.|++++.|.+|
T Consensus       185 ~l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  185 TLPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             CCCccccc--ccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHh
Confidence            35677865  9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHH
Q psy677          393 AKV  395 (451)
Q Consensus       393 lrt  395 (451)
                      ...
T Consensus       263 ~ES  265 (279)
T KOG2462|consen  263 SES  265 (279)
T ss_pred             hhh
Confidence            753

>KOG3576|consensus

Probab=99.54  E-value=3.7e-15  Score=140.25  Aligned_cols=97  Identities=28%  Similarity=0.624  Sum_probs=86.3

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKR  391 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~  391 (451)
                      ....|.|.+  |+|.|.-..-|.+|++.|...|.|.|..|||.|....+|++|+|+|+|.+||+|..|+|.|.++..|..
T Consensus       114 d~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  114 DQDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            456799976  999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-HHHh----------CcccchHHHHHHH
Q psy677          392 HA-KVHL----------KQRSKKESKMAVM  410 (451)
Q Consensus       392 Hl-rtH~----------~er~~k~~~~~~~  410 (451)
                      |+ ++|.          +.|.|.|+.|+..
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t  221 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYT  221 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCC
Confidence            98 5564          3455667777543

>KOG3623|consensus

Probab=99.47  E-value=1.1e-14  Score=156.16  Aligned_cols=81  Identities=43%  Similarity=0.954  Sum_probs=77.3

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKR  391 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~  391 (451)
                      .+..|.|  +.|+|.|...+.|.||.-.|+|.|||+|.+|.|+|..+.+|..|+|.|.|||||.|+.|+|+|+....+..
T Consensus       891 e~gmyaC--DqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQ  968 (1007)
T KOG3623|consen  891 EDGMYAC--DQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQ  968 (1007)
T ss_pred             ccccchH--HHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHh
Confidence            3567999  66999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHH
Q psy677          392 HAK  394 (451)
Q Consensus       392 Hlr  394 (451)
                      ||.
T Consensus       969 HMN  971 (1007)
T KOG3623|consen  969 HMN  971 (1007)
T ss_pred             hhc
Confidence            984

>KOG3576|consensus

Probab=99.32  E-value=7.8e-13  Score=124.68  Aligned_cols=110  Identities=25%  Similarity=0.509  Sum_probs=96.6

Q ss_pred             CCCCcCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhccc
Q psy677          290 LPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT  369 (451)
Q Consensus       290 ~p~~~~p~~~~~~p~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHt  369 (451)
                      +-++...+.-.++.+++.+-|..-|.|.|.+  |||.|.+.-+|++|+|+|+|.+||+|..|+|+|..+-.|..|.+.-+
T Consensus       120 CrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  120 CRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            4455566666677889999999999999966  99999999999999999999999999999999999999999987544


Q ss_pred             C-----------CCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          370 G-----------EKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       370 G-----------eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      |           +|.|.|+.||..-.+...+..|++.|+...+
T Consensus       198 gv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  198 GVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             CchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            4           4679999999999999999999999976554

>KOG3623|consensus

Probab=99.21  E-value=3e-12  Score=137.76  Aligned_cols=80  Identities=34%  Similarity=0.807  Sum_probs=72.8

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcC-------------CCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTG-------------QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htg-------------eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +..|.|..  |..+|..+..|.+||.+|..             -|.|+|..|+|+|..+.+|+.|+|+|.|||||.|+.|
T Consensus       238 e~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnC  315 (1007)
T KOG3623|consen  238 EPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNC  315 (1007)
T ss_pred             CCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccc
Confidence            44588955  99999999999999998862             3679999999999999999999999999999999999


Q ss_pred             CCccCChHHHHHHHH
Q psy677          380 GRKFARSDEKKRHAK  394 (451)
Q Consensus       380 gK~Fs~~s~Lk~Hlr  394 (451)
                      +|+|+....+..||.
T Consensus       316 kKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  316 KKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ccccccCCccccccc
Confidence            999999999999983

>KOG1074|consensus

Probab=99.20  E-value=1.7e-11  Score=134.01  Aligned_cols=51  Identities=37%  Similarity=0.850  Sum_probs=32.9

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      ++|.+  |.|.|...+.|+.|.|.|+|+|||+|.+|+.+|.++.+|+.|..+|
T Consensus       354 hkCr~--CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH  404 (958)
T KOG1074|consen  354 HKCRF--CAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRH  404 (958)
T ss_pred             chhhh--hHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeec
Confidence            45644  6666666666666666666666666666666666666666665444

>KOG1074|consensus

Probab=98.98  E-value=8.8e-11  Score=128.49  Aligned_cols=84  Identities=36%  Similarity=0.805  Sum_probs=77.2

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCC----CceecC---CCCCccCC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE----KPFSCD---VCGRKFAR  385 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe----KPfkC~---~CgK~Fs~  385 (451)
                      ..+..|.+  |.+...-++.|+.|.|+|+|+|||+|.+|+++|.++.+|+.||.+|...    -+|.|+   +|-+.|..
T Consensus       603 TdPNqCii--C~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  603 TDPNQCII--CLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             CCccceee--eeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            35788976  9999999999999999999999999999999999999999999999653    358899   99999999


Q ss_pred             hHHHHHHHHHHhC
Q psy677          386 SDEKKRHAKVHLK  398 (451)
Q Consensus       386 ~s~Lk~HlrtH~~  398 (451)
                      .-.|..|+|+|.+
T Consensus       681 ~V~lpQhIriH~~  693 (958)
T KOG1074|consen  681 AVTLPQHIRIHLG  693 (958)
T ss_pred             cccccceEEeecC
Confidence            9999999999983

>KOG3608|consensus

Probab=98.94  E-value=3.2e-10  Score=114.39  Aligned_cols=114  Identities=23%  Similarity=0.472  Sum_probs=70.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhc--CCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCc
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHT--GQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRK  382 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Ht--geKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~  382 (451)
                      ++.++|.++|...|+.  ||..|.++..|-.|++..+  ...+|.|..|-|+|.+...|+.|++.|.  .-|+|+.|...
T Consensus       197 eH~r~Hs~eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmt  272 (467)
T KOG3608|consen  197 EHIRTHSNEKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMT  272 (467)
T ss_pred             HHHHhcCCCeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccC
Confidence            3444555555555532  5555555555555554322  2345666666666666666666665553  23666666666


Q ss_pred             cCChHHHHHHHH-HHhCcccchHHHHHHHHHHHHHHHHHHH
Q psy677          383 FARSDEKKRHAK-VHLKQRSKKESKMAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       383 Fs~~s~Lk~Hlr-tH~~er~~k~~~~~~~~~qqq~qqqhQq  422 (451)
                      ....+.|.+|++ .|.+.|++||..|....-....+++|.+
T Consensus       273 c~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  273 CSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             CCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH
Confidence            666677777764 4677888888888877777777777765

>KOG3608|consensus

Probab=98.93  E-value=3.9e-10  Score=113.74  Aligned_cols=112  Identities=25%  Similarity=0.525  Sum_probs=92.0

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhh-cccCCCceecCCCCCccCChH
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCDVCGRKFARSD  387 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~r-tHtGeKPfkC~~CgK~Fs~~s  387 (451)
                      +.....+|.|  ..|.|+|.....|+.|++.|.  .-|+|+.|.......+.|.+|++ .|..+|||+|+.|.+.|.+..
T Consensus       231 t~l~~n~fqC--~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~es  306 (467)
T KOG3608|consen  231 TELNTNSFQC--AQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRES  306 (467)
T ss_pred             hhhcCCchHH--HHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHH
Confidence            3344568999  569999999999999999984  46999999999999999999988 477889999999999999999


Q ss_pred             HHHHHHHHHhCcccchHHH--HHHHHHHHHHHHHHHHHHh
Q psy677          388 EKKRHAKVHLKQRSKKESK--MAVMMSQQQAQQQQQQNHV  425 (451)
Q Consensus       388 ~Lk~HlrtH~~er~~k~~~--~~~~~~qqq~qqqhQqn~~  425 (451)
                      .|.+|+.+|. +-.|.|+.  |-..+...-+++.|-....
T Consensus       307 dL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  307 DLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             HHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            9999999988 66788776  6666666666666655443

>PHA00733 hypothetical protein

Probab=98.85  E-value=1.6e-09  Score=96.72  Aligned_cols=84  Identities=24%  Similarity=0.450  Sum_probs=70.1

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHH--HH---HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCC
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRH--IR---IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFAR  385 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH--~r---~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~  385 (451)
                      ...+++.|.+  |.+.|.....|..|  ++   .+.+.++|.|+.|++.|.....|..|++.|  +++|.|..|++.|..
T Consensus        36 ~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            3457799965  99998888877766  22   234588999999999999999999999987  467999999999999


Q ss_pred             hHHHHHHHHHHhC
Q psy677          386 SDEKKRHAKVHLK  398 (451)
Q Consensus       386 ~s~Lk~HlrtH~~  398 (451)
                      ...|.+|+...++
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999976654

>PHA02768 hypothetical protein; Provisional

Probab=98.65  E-value=6.5e-09  Score=79.49  Aligned_cols=37  Identities=19%  Similarity=0.442  Sum_probs=18.7

Q ss_pred             CCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchh
Q psy677          323 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHL  361 (451)
Q Consensus       323 Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~L  361 (451)
                      ||+.|.+.++|.+|+++|+  ++|+|..|++.|.+.+.|
T Consensus        11 CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768         11 CGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             hCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            5555555555555555554  345555555555444433

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.62  E-value=3.5e-08  Score=106.67  Aligned_cols=93  Identities=17%  Similarity=0.456  Sum_probs=78.6

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccC--------
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFA--------  384 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs--------  384 (451)
                      ++.+.|.  .|++.|. ...|..|++.|+  ++|.|+ |++.+ .+..|..|+++|.++|++.|..|++.|.        
T Consensus       451 ~~H~~C~--~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~  523 (567)
T PLN03086        451 KNHVHCE--KCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDV  523 (567)
T ss_pred             ccCccCC--CCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccch
Confidence            4567895  5999996 678999999985  889999 99765 6689999999999999999999999995        


Q ss_pred             --ChHHHHHHHHHHhCcccchHHHHHHHHHH
Q psy677          385 --RSDEKKRHAKVHLKQRSKKESKMAVMMSQ  413 (451)
Q Consensus       385 --~~s~Lk~HlrtH~~er~~k~~~~~~~~~q  413 (451)
                        +...|..|.+++ +.+.+.|..|+..+..
T Consensus       524 ~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        524 RDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             hhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence              245899999986 8999999999765543

>PHA02768 hypothetical protein; Provisional

Probab=98.37  E-value=2.2e-07  Score=71.16  Aligned_cols=44  Identities=25%  Similarity=0.532  Sum_probs=40.6

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHH
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKK  390 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk  390 (451)
                      -|.|+.|++.|.+.++|.+|+++|+  ++|+|..|+|.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3899999999999999999999998  7999999999999887663

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.29  E-value=2.3e-07  Score=60.49  Aligned_cols=24  Identities=58%  Similarity=1.286  Sum_probs=13.0

Q ss_pred             hhhhhhcccCCCceecCCCCCccC
Q psy677          361 LTTHIRTHTGEKPFSCDVCGRKFA  384 (451)
Q Consensus       361 Lk~H~rtHtGeKPfkC~~CgK~Fs  384 (451)
                      |.+|+++|+|+|||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555554

...

>KOG3993|consensus

Probab=98.24  E-value=1.4e-07  Score=97.32  Aligned_cols=86  Identities=29%  Similarity=0.613  Sum_probs=71.1

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhccc--------CCC---------------
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT--------GEK---------------  372 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHt--------GeK---------------  372 (451)
                      |+|..  |...|.+...|.+|+-...-...|+|+.|+|.|....+|..|.|.|.        +..               
T Consensus       268 yiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  268 YICQL--CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHH--HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            99955  99999999999999754333456999999999999999999999874        111               


Q ss_pred             ----------ceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          373 ----------PFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       373 ----------PfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                                .|.|.+|+|.|.+...|++|+-+|+....-+
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                      3899999999999999999998887654433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.16  E-value=1.1e-06  Score=57.35  Aligned_cols=26  Identities=54%  Similarity=1.133  Sum_probs=24.1

Q ss_pred             HHHHHHHHhcCCCCccCcccccccCC
Q psy677          332 ELTRHIRIHTGQKPFQCRICMRSFSR  357 (451)
Q Consensus       332 ~L~rH~r~HtgeKPf~C~~C~K~F~~  357 (451)
                      +|.+|+++|+++|+|.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58999999999999999999999963

...

>PHA00733 hypothetical protein

Probab=98.10  E-value=8.5e-07  Score=79.26  Aligned_cols=93  Identities=17%  Similarity=0.223  Sum_probs=71.5

Q ss_pred             hHHHHHHHHHhcCCCCccCcccccccCCcchhhhh--hh---cccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH--IR---THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       330 ~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H--~r---tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      ...|.++-..-...+++.|.+|.+.|.....|..|  ++   .+++++||.|..|++.|.....|..|++.|  ++.+.|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C  102 (128)
T PHA00733         25 LEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVC  102 (128)
T ss_pred             HHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccC
Confidence            34444433332346789999999998887777665  22   234689999999999999999999999987  456899


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q psy677          405 SKMAVMMSQQQAQQQQQQNH  424 (451)
Q Consensus       405 ~~~~~~~~qqq~qqqhQqn~  424 (451)
                      ..|...|.....+..|+...
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHh
Confidence            99999999888888876543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.10  E-value=2.8e-06  Score=85.33  Aligned_cols=73  Identities=27%  Similarity=0.633  Sum_probs=51.1

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHH-hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKK  390 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~-HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk  390 (451)
                      .+|||+|++++|.|.|+....|+-||.. |...+...-+          .-..|.-.-...|||+|++|+|+|.....|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCccce
Confidence            3599999999999999999999999874 4332222211          1111111123568999999999999888888


Q ss_pred             HHHH
Q psy677          391 RHAK  394 (451)
Q Consensus       391 ~Hlr  394 (451)
                      .|++
T Consensus       416 YHr~  419 (423)
T COG5189         416 YHRK  419 (423)
T ss_pred             eccc
Confidence            8863

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.05  E-value=4.7e-06  Score=90.50  Aligned_cols=76  Identities=21%  Similarity=0.478  Sum_probs=64.8

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCC----------cchhhhhhhcccCCCceecCCCCCcc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR----------SDHLTTHIRTHTGEKPFSCDVCGRKF  383 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~----------~s~Lk~H~rtHtGeKPfkC~~CgK~F  383 (451)
                      +++.|  . |++.| .+..|..|+++|...|++.|.+|++.|..          ...|..|..++ |.+++.|..||+.|
T Consensus       477 kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~V  551 (567)
T PLN03086        477 EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSV  551 (567)
T ss_pred             CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCee
Confidence            78999  4 99765 66899999999999999999999999952          34799999986 99999999999998


Q ss_pred             CChHHHHHHHHH
Q psy677          384 ARSDEKKRHAKV  395 (451)
Q Consensus       384 s~~s~Lk~Hlrt  395 (451)
                      ..+ .|..|+..
T Consensus       552 rlr-dm~~H~~~  562 (567)
T PLN03086        552 MLK-EMDIHQIA  562 (567)
T ss_pred             eeh-hHHHHHHH
Confidence            877 46788743

>PHA00732 hypothetical protein

Probab=97.87  E-value=5.8e-06  Score=68.05  Aligned_cols=48  Identities=25%  Similarity=0.496  Sum_probs=37.9

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHH-hcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~-HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      +|.|  ..|++.|.+...|.+|++. |.   ++.|+.|++.|.   .|..|++++.+
T Consensus         1 py~C--~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKC--PICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccC--CCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            5788  5599999999999999985 54   368999999997   57888876643

>PHA00616 hypothetical protein

Probab=97.73  E-value=6.2e-06  Score=60.45  Aligned_cols=33  Identities=21%  Similarity=0.451  Sum_probs=17.4

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI  350 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~  350 (451)
                      |.|  ..||+.|..+..|.+|++.|+++++|.|+.
T Consensus         2 YqC--~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          2 YQC--LRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             Ccc--chhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            455  335555555555555555555555555543

>PHA00616 hypothetical protein

Probab=97.63  E-value=2e-05  Score=57.77  Aligned_cols=34  Identities=15%  Similarity=0.386  Sum_probs=24.1

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      ||+|..||+.|..+..|.+|++.|+|+++|.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4677777777777777777777777777776654

>PHA00732 hypothetical protein

Probab=97.48  E-value=8.5e-05  Score=61.18  Aligned_cols=47  Identities=30%  Similarity=0.512  Sum_probs=40.3

Q ss_pred             CccCcccccccCCcchhhhhhhc-ccCCCceecCCCCCccCChHHHHHHHHHHh
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRT-HTGEKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rt-HtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      ||.|..|++.|.+...|++|++. |.+   +.|+.|++.|.+   |..|.+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~---l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR---LNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC---hhhhhcccC
Confidence            58999999999999999999985 653   689999999984   788886654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.34  E-value=0.00015  Score=45.22  Aligned_cols=23  Identities=35%  Similarity=0.973  Sum_probs=20.0

Q ss_pred             eecCCCCCccCChHHHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |.|..|++.|.+...|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68889999999999999998875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.25  E-value=0.00023  Score=54.11  Aligned_cols=49  Identities=24%  Similarity=0.517  Sum_probs=23.1

Q ss_pred             ccCcccccccCCcchhhhhhhc-ccC-CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          346 FQCRICMRSFSRSDHLTTHIRT-HTG-EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rt-HtG-eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |.|++|++ ..+...|..|... |.. .+.+.|++|...+.  .+|.+|++.++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555555 3334445555443 222 23455555555433  25666665443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.96  E-value=0.00078  Score=51.18  Aligned_cols=51  Identities=25%  Similarity=0.597  Sum_probs=39.8

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHH-hcCC-CCccCcccccccCCcchhhhhhhcccC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRI-HTGQ-KPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~-Htge-KPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      -|.|++  |++ ..+...|..|... |..+ +.+.|++|...+.  .+|.+|++.+++
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            388977  999 5567889999876 5543 5799999998765  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.93  E-value=0.00078  Score=41.54  Aligned_cols=24  Identities=33%  Similarity=0.924  Sum_probs=18.7

Q ss_pred             eecCCCCCccCChHHHHHHHHHHh
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |.|++|++.|.....|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            678899999999999999988774

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.83  E-value=0.00092  Score=55.14  Aligned_cols=74  Identities=22%  Similarity=0.518  Sum_probs=22.3

Q ss_pred             cCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHH
Q psy677          317 ACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       317 ~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      .|.+  |+..|.+...|..||...++-.   .. ....+.....+..+.+... ...+.|..|++.|.....|..|++.+
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~---~~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFD---IP-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccc--cccccccccccccccccccccc---cc-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3755  9999999999999997644321   11 1122234444444444322 23799999999999999999999875


Q ss_pred             h
Q psy677          397 L  397 (451)
Q Consensus       397 ~  397 (451)
                      .
T Consensus        74 ~   74 (100)
T PF12756_consen   74 H   74 (100)
T ss_dssp             T
T ss_pred             c
Confidence            3

>KOG3993|consensus

Probab=96.68  E-value=0.00067  Score=70.77  Aligned_cols=83  Identities=14%  Similarity=0.283  Sum_probs=67.3

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhC--------------------------
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK--------------------------  398 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~--------------------------  398 (451)
                      -|.|..|...|.+...|.+|..--.-..-|+|..|+|.|+-..+|..|+|.|.-                          
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            499999999999999999997532222449999999999999999999999851                          


Q ss_pred             -------cccchHHHHHHHHHHHHHHHHHHHHHhhh
Q psy677          399 -------QRSKKESKMAVMMSQQQAQQQQQQNHVHQ  427 (451)
Q Consensus       399 -------er~~k~~~~~~~~~qqq~qqqhQqn~~~~  427 (451)
                             +..|.|..|.+.|..|.-++.||-.....
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence                   12477899999999998888886554433

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.60  E-value=0.00087  Score=43.37  Aligned_cols=25  Identities=36%  Similarity=0.921  Sum_probs=20.1

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHh
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      +|.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788888888888888888887765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.19  E-value=0.0031  Score=39.15  Aligned_cols=23  Identities=48%  Similarity=1.070  Sum_probs=15.3

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHh
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      |.|.  .|++.|.+...|.+|++.|
T Consensus         1 y~C~--~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCP--ICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEET--TTTEEESSHHHHHHHHHHH
T ss_pred             CCCC--CCCCccCCHHHHHHHHhHC
Confidence            4563  4777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PRK04860 hypothetical protein; Provisional

Probab=96.04  E-value=0.0022  Score=59.59  Aligned_cols=38  Identities=26%  Similarity=0.725  Sum_probs=25.8

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCCh
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS  386 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~  386 (451)
                      +|.|. |++   ....+++|.++|+|+++|+|..|++.|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            46776 765   555667777777777777777777766543

>smart00355 ZnF_C2H2 zinc finger

Probab=95.96  E-value=0.0065  Score=37.64  Aligned_cols=24  Identities=29%  Similarity=0.764  Sum_probs=20.0

Q ss_pred             eecCCCCCccCChHHHHHHHHHHh
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578888888888888888888764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.57  E-value=0.015  Score=44.12  Aligned_cols=40  Identities=23%  Similarity=0.555  Sum_probs=24.3

Q ss_pred             hhhhhcc-cCCCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          362 TTHIRTH-TGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       362 k~H~rtH-tGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      ..+.+.| ..+.|..|++|+..+.+..+|++|+..+++.|+
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3444433 356789999999999999999999988887664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.54  E-value=0.0041  Score=40.17  Aligned_cols=18  Identities=39%  Similarity=0.713  Sum_probs=9.2

Q ss_pred             CCCccCChHHHHHHHHHh
Q psy677          323 CDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       323 Cgk~F~s~s~L~rH~r~H  340 (451)
                      |++.|.+...|..|++.|
T Consensus         7 C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    7 CGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             TTEEESSHHHHHHHHCTT
T ss_pred             cCCccCChhHHHHHhHHh
Confidence            555555555555555443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.30  E-value=0.015  Score=35.63  Aligned_cols=23  Identities=39%  Similarity=1.099  Sum_probs=14.0

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHh
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      |.|.+  |++.|.+...|..|++.|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            45644  777777777777777665

...

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.16  E-value=0.0063  Score=61.37  Aligned_cols=73  Identities=41%  Similarity=0.716  Sum_probs=58.9

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHH--HhcCC--CCccCc--ccccccCCcchhhhhhhcccCCCceecCC--CCCccCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIR--IHTGQ--KPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFAR  385 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r--~Htge--KPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~  385 (451)
                      .++.|  ..|...|.+...|.+|.+  .|.++  +++.|+  .|++.|.+...+.+|..+|++.++++|..  |.+.+..
T Consensus       288 ~~~~~--~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (467)
T COG5048         288 LPIKS--KQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSP  365 (467)
T ss_pred             cCCCC--ccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccc
Confidence            45677  559999999999999999  79888  899999  79999999999999999999888888754  5555554


Q ss_pred             hHH
Q psy677          386 SDE  388 (451)
Q Consensus       386 ~s~  388 (451)
                      ...
T Consensus       366 ~~~  368 (467)
T COG5048         366 LLN  368 (467)
T ss_pred             ccC
Confidence            433

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.39  E-value=0.018  Score=58.08  Aligned_cols=57  Identities=49%  Similarity=0.918  Sum_probs=28.8

Q ss_pred             CccCcccccccCCcchhhhhhh--cccCC--CceecC--CCCCccCChHHHHHHHHHHhCccc
Q psy677          345 PFQCRICMRSFSRSDHLTTHIR--THTGE--KPFSCD--VCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~r--tHtGe--KPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      ++.|..|...|.+...|.+|.+  .|.++  ++|.|.  .|++.|.+...+.+|..+|.+.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            3445555555555555555555  45555  555555  455555555555555555544443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.91  E-value=0.03  Score=35.34  Aligned_cols=23  Identities=26%  Similarity=0.852  Sum_probs=18.2

Q ss_pred             eecCCCCCccCChHHHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67888888888888888887543

>KOG1146|consensus

Probab=93.85  E-value=0.063  Score=63.18  Aligned_cols=80  Identities=18%  Similarity=0.375  Sum_probs=51.9

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHH-hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHH
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDE  388 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~-HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~  388 (451)
                      +...|-|+|+  .|+..|+....|..|||. |...+-   .+|.. +..-..+.+-..--.+.++|.|..|...|..+.+
T Consensus       460 ~S~~kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~---~~c~~-gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~  533 (1406)
T KOG1146|consen  460 HSFFKTLKCP--KCNWHYKLAQTLGVHMRSKHPESQS---AYCKA-GQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGN  533 (1406)
T ss_pred             ecccccccCC--ccchhhhhHHHhhhcccccccccch---hHhHh-ccccccccccccccCCCCcccceeeeeeeecchH
Confidence            4445778895  499999999999999997 432222   33321 1111111111111235689999999999999999


Q ss_pred             HHHHHHH
Q psy677          389 KKRHAKV  395 (451)
Q Consensus       389 Lk~Hlrt  395 (451)
                      |.+|+..
T Consensus       534 LsihlqS  540 (1406)
T KOG1146|consen  534 LSIHLQS  540 (1406)
T ss_pred             HHHHHHH
Confidence            9999854

>PRK04860 hypothetical protein; Provisional

Probab=93.80  E-value=0.036  Score=51.56  Aligned_cols=40  Identities=28%  Similarity=0.694  Sum_probs=33.9

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSD  359 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s  359 (451)
                      -+|.|  . |++   ....+.+|.++|+++++|.|..|++.|....
T Consensus       118 ~~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEc--C-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            36899  4 887   6678899999999999999999999987544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.73  E-value=0.071  Score=33.49  Aligned_cols=23  Identities=30%  Similarity=0.587  Sum_probs=16.9

Q ss_pred             eecCCCCCccCChHHHHHHHHHHh
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |+|..|..... ...|.+|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67888887777 778888888765

>KOG4173|consensus

Probab=93.44  E-value=0.015  Score=55.94  Aligned_cols=83  Identities=29%  Similarity=0.606  Sum_probs=67.4

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcc----------cCCCceecC--CCC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH----------TGEKPFSCD--VCG  380 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtH----------tGeKPfkC~--~Cg  380 (451)
                      .+.|.|.+.+|-..|.....+..|..+-++   -.|.+|.+.|.+...|..|+...          .|..-|.|-  .|+
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt  153 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCT  153 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhh
Confidence            345889999999999998888888765333   37999999999999999998643          355579994  599


Q ss_pred             CccCChHHHHHHH-HHHhC
Q psy677          381 RKFARSDEKKRHA-KVHLK  398 (451)
Q Consensus       381 K~Fs~~s~Lk~Hl-rtH~~  398 (451)
                      -.|.+....+.|+ ++|.-
T Consensus       154 ~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  154 EKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhhhhHHHHhccC
Confidence            9999999999998 77753

>smart00355 ZnF_C2H2 zinc finger

Probab=92.75  E-value=0.11  Score=31.92  Aligned_cols=24  Identities=38%  Similarity=0.923  Sum_probs=15.6

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      |.|.  .|++.|.....|..|++.|.
T Consensus         1 ~~C~--~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCP--ECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCC--CCcchhCCHHHHHHHHHHhc
Confidence            3563  37777777777777776653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.70  E-value=0.23  Score=37.76  Aligned_cols=32  Identities=38%  Similarity=0.795  Sum_probs=17.8

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCC
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKP  345 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKP  345 (451)
                      .+.|-.|++  |+..+....+|++|+..+++.||
T Consensus        21 S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            455667754  77777777777777776665554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=90.97  E-value=0.055  Score=35.13  Aligned_cols=21  Identities=38%  Similarity=0.899  Sum_probs=14.1

Q ss_pred             eecCCCCCccCChHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAK  394 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~Hlr  394 (451)
                      |.|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            566777777777776666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.40  E-value=0.29  Score=50.56  Aligned_cols=106  Identities=25%  Similarity=0.485  Sum_probs=67.4

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccc---cccC------CcchhhhhhhcccCCCce----ecCCCCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICM---RSFS------RSDHLTTHIRTHTGEKPF----SCDVCGR  381 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~---K~F~------~~s~Lk~H~rtHtGeKPf----kC~~CgK  381 (451)
                      .|.|+...|..+......|+.|.+..++  .+.|..|-   +.|.      ++..|+.|...-..+.-|    .|..|.+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            3889988898888888999999987433  36677763   2343      445566665543222223    5999999


Q ss_pred             ccCChHHHHHHHHHHhCcccchHHHHH----HHHHHHHHHHHHHHH
Q psy677          382 KFARSDEKKRHAKVHLKQRSKKESKMA----VMMSQQQAQQQQQQN  423 (451)
Q Consensus       382 ~Fs~~s~Lk~HlrtH~~er~~k~~~~~----~~~~qqq~qqqhQqn  423 (451)
                      .|-.-+.|.+|+|..+ ++.+-|..++    .+|.....+..|=++
T Consensus       229 ~FYdDDEL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~  273 (493)
T COG5236         229 YFYDDDELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRN  273 (493)
T ss_pred             eecChHHHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhc
Confidence            9999999999986533 2333333332    344455555555444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=89.69  E-value=0.15  Score=33.08  Aligned_cols=22  Identities=32%  Similarity=0.824  Sum_probs=14.5

Q ss_pred             ccCcccccccCCcchhhhhhhc
Q psy677          346 FQCRICMRSFSRSDHLTTHIRT  367 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rt  367 (451)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=89.20  E-value=0.2  Score=31.46  Aligned_cols=23  Identities=30%  Similarity=0.901  Sum_probs=14.2

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHh
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      |.|.+  |++.|.+...|..|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            45644  666666666666666543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=88.64  E-value=0.17  Score=51.59  Aligned_cols=43  Identities=23%  Similarity=0.449  Sum_probs=34.3

Q ss_pred             CCCceecCC--CCCccCChHHHHHHHHH-H------------------hCcccchHHHHHHHHH
Q psy677          370 GEKPFSCDV--CGRKFARSDEKKRHAKV-H------------------LKQRSKKESKMAVMMS  412 (451)
Q Consensus       370 GeKPfkC~~--CgK~Fs~~s~Lk~Hlrt-H------------------~~er~~k~~~~~~~~~  412 (451)
                      ++|||+|++  |+|.|.....|+.|+.- |                  .+.|+|+|+.|.+++.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYK  409 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYK  409 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhc
Confidence            459999986  99999999999999853 3                  1348899999987653

>KOG2231|consensus

Probab=88.49  E-value=0.34  Score=54.13  Aligned_cols=46  Identities=24%  Similarity=0.550  Sum_probs=25.5

Q ss_pred             cCcccccccCCcchhhhhhhcccCCCceecCCC------CCccCChHHHHHHHHHH
Q psy677          347 QCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC------GRKFARSDEKKRHAKVH  396 (451)
Q Consensus       347 ~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C------gK~Fs~~s~Lk~HlrtH  396 (451)
                      .|.+|...|.....|.+|++.++    |-|..|      +-.|...+.|..|-|.+
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhc
Confidence            46666666666666666666543    334444      23345555555555443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.76  E-value=0.73  Score=31.12  Aligned_cols=22  Identities=27%  Similarity=0.578  Sum_probs=18.9

Q ss_pred             ceecCCCCCccCChHHHHHHHH
Q psy677          373 PFSCDVCGRKFARSDEKKRHAK  394 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hlr  394 (451)
                      +|.|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5889999999998888888874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=86.62  E-value=0.61  Score=30.09  Aligned_cols=21  Identities=43%  Similarity=1.067  Sum_probs=15.6

Q ss_pred             eecCCCCCccCChHHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAKV  395 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~Hlrt  395 (451)
                      ..|..||+.| ..+.|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3688888888 66678888765

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=84.38  E-value=0.9  Score=28.36  Aligned_cols=23  Identities=39%  Similarity=0.909  Sum_probs=13.2

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      |.|.  .|+.... ...|.+|++.|+
T Consensus         1 y~C~--~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCP--HCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-S--SSS-EES-HHHHHHHHHHHH
T ss_pred             CCCC--CCCCcCC-HHHHHHHHHhhC
Confidence            4563  3776666 667777776653

>KOG2186|consensus

Probab=83.98  E-value=0.67  Score=46.05  Aligned_cols=49  Identities=31%  Similarity=0.632  Sum_probs=36.4

Q ss_pred             ccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHh
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |.|..||....- ..+.+|+.+-++ .-|.|..|++.|.+ ..++.|.+.-+
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcc
Confidence            778888877653 456678887777 67888889998888 66778876544

>KOG2231|consensus

Probab=83.37  E-value=0.83  Score=51.19  Aligned_cols=69  Identities=25%  Similarity=0.534  Sum_probs=45.2

Q ss_pred             ccCChHHHHHHHHH-hcCCCCccCcccc---------cccCCcchhhhhhhcc-cCCCc----eecCCCCCccCChHHHH
Q psy677          326 RFSRSDELTRHIRI-HTGQKPFQCRICM---------RSFSRSDHLTTHIRTH-TGEKP----FSCDVCGRKFARSDEKK  390 (451)
Q Consensus       326 ~F~s~s~L~rH~r~-HtgeKPf~C~~C~---------K~F~~~s~Lk~H~rtH-tGeKP----fkC~~CgK~Fs~~s~Lk  390 (451)
                      .|.....|++|++. |.   -+.|.+|-         ....++..|..|+..- .+++-    -.|..|...|.....|.
T Consensus       123 ~~~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~  199 (669)
T KOG2231|consen  123 EFKSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELY  199 (669)
T ss_pred             chhHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHH
Confidence            34478899999964 53   35555542         2223445666776542 12222    25899999999999999


Q ss_pred             HHHHHHh
Q psy677          391 RHAKVHL  397 (451)
Q Consensus       391 ~HlrtH~  397 (451)
                      +|++.++
T Consensus       200 rH~~~~h  206 (669)
T KOG2231|consen  200 RHLRFDH  206 (669)
T ss_pred             Hhhccce
Confidence            9998654

>KOG2893|consensus

Probab=83.12  E-value=0.26  Score=48.59  Aligned_cols=45  Identities=31%  Similarity=0.778  Sum_probs=33.1

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhh
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH  364 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H  364 (451)
                      .|+| |=  .|++-|....-|..|.+.    |.|+|-+|.|.+.+--.|..|
T Consensus         9 ~kpw-cw--ycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen    9 DKPW-CW--YCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             CCce-ee--ecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            4555 43  388889888888888764    458899998877777777766

>KOG4167|consensus

Probab=83.00  E-value=0.68  Score=51.90  Aligned_cols=25  Identities=32%  Similarity=0.729  Sum_probs=23.4

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHh
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      .|.|..|+|.|.....++.|||+|.
T Consensus       792 iFpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  792 IFPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             eeehHHHHHHHHHHhhhhHHHHHHH
Confidence            4899999999999999999999995

>KOG2893|consensus

Probab=80.63  E-value=0.94  Score=44.78  Aligned_cols=42  Identities=29%  Similarity=0.615  Sum_probs=34.0

Q ss_pred             cCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHH
Q psy677          347 QCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH  392 (451)
Q Consensus       347 ~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~H  392 (451)
                      -|-+|++-|....-|..|.+.    |-|+|.+|.|....--.|..|
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceee
Confidence            488999999999999998875    459999999876665555555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	451
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-45
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-44
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-44
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-44
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-44
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-43
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-43
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-34
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-34
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-27
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-27
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-24
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-19
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-18
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-18
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-15
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-15
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		6e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-15
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-13
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		6e-12
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-11
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-11
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		7e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-10
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		8e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-09
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		1e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-08
1xf7_A	29	High Resolution Nmr Structure Of The Wilms' Tumor S		1e-07
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		1e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-06
2ent_A	48	Solution Structure Of The Second C2h2-Type Zinc Fin		2e-05
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		5e-05
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		1e-04
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-04
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score =  178 bits (451), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 79/88 (89%), Positives = 87/88 (98%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFARSDE+KRH K+HL+Q+
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score =  177 bits (449), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/87 (90%), Positives = 86/87 (98%)
Query: 312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 371
           HERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGE
Sbjct: 1   HERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 372 KPFSCDVCGRKFARSDEKKRHAKVHLK 398
           KPF+CD+CGRKFARSDE+KRH K+HL+
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score =  176 bits (447), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/87 (90%), Positives = 86/87 (98%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQ 399
           PF+CD+CGRKFARSDE+KRH K+HL+Q
Sbjct: 61  PFACDICGRKFARSDERKRHTKIHLRQ 87

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score =  175 bits (444), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/88 (88%), Positives = 86/88 (97%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFSRS ELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFARSDE+KRH K+HL+Q+
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score =  174 bits (441), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 77/88 (87%), Positives = 86/88 (97%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFSRS +LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFARSDE+KRH K+HL+Q+
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 85/88 (96%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFS+S  LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFARSDE+KRH K+HL+Q+
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score =  172 bits (436), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 84/88 (95%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFS S  LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFARSDE+KRH K+HL+Q+
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHLRQK 89

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score =  141 bits (356), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/88 (70%), Positives = 72/88 (81%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFS+   L  HIRIHTGQKPFQCRICMR+FS+   L  HIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFA    + RH K+HL+Q+
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIHLRQK 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score =  141 bits (355), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/88 (70%), Positives = 72/88 (81%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFS+   L  HIRIHTGQKPFQCRICMR+FS+   L  HIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           PF+CD+CGRKFA    + RH K+HL+Q+
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIHLRQK 89

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/56 (96%), Positives = 56/56 (100%)
Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 369
           RPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHT
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C  ++C+RRFSRSD+L RH R HTG KPFQC+ C R FSRSDHL TH RTHTGEK
Sbjct: 34  EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93
Query: 373 PFSCDV--CGRKFARSDEKKRHAKVH 396
           PFSC    C +KFARSDE  RH  +H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           KPFQCRICMR+FSRSDHLTTHIRTHTGEKPF+CD+CGRKFARSDE+KRH  + 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY CP   C + FS+S  L +H R HTG+KP++C  C +SFS+S  L  H RTHTGEK
Sbjct: 2   EKPYKCP--ECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           P+ C  CG+ F+RSD   RH + H
Sbjct: 60  PYKCPECGKSFSRSDHLSRHQRTH 83

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRT 367
           +T   E+PYACP   C + FS+   L  H R HTG+KP++C  C +SFSR D+L TH RT
Sbjct: 98  RTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT 155
Query: 368 HTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS 401
           HTGEKP+ C  CG+ F+R D    H + H  +++
Sbjct: 156 HTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 45/61 (73%)
Query: 308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRT 367
           +T   E+PY C  E CD RF+RSDELTRH R HTG KPFQC +C RSFSRSDHL  H++ 
Sbjct: 38  RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97
Query: 368 H 368
           H
Sbjct: 98  H 98

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 316 YACPVENCDRR---FSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTG 370
           + C  E C R    F    +L  HIR+HTG+KPF C    C + F+RS++L  H RTHTG
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117
Query: 371 EKPFSCDV--CGRKFARSDEKKRHAKVHLKQRS 401
           EKPF C+   C R+FA S ++K+H  VH   +S
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRT 367
           +T   E+PY C  + C  +F+RSDELTRH R HTG +PFQC+ C R+FSRSDHL  H++ 
Sbjct: 28  RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87
Query: 368 H 368
           H
Sbjct: 88  H 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 351 CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQR 400
           C +++++S HL  H+RTHTGEKP+ CD   CG KFARSDE  RH + H   R
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 307 SKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTH 364
           S+T  H     C    C + +++S  L  H+R HTG+KP+ C    C   F+RSD LT H
Sbjct: 2   SRTATH----TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH 57
Query: 365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL 397
            R HTG +PF C  C R F+RSD    H K H 
Sbjct: 58  YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 90

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 323 CDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSC--DV 378
           C + F  S +L RH  +HTG+KPFQC    C + FS   +L TH+R HTG++P+ C  D 
Sbjct: 40  CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99
Query: 379 CGRKFARSDEKKRHAKVHLKQRSKK 403
           C +KFA+S   K H   H K ++ +
Sbjct: 100 CNKKFAQSTNLKSHILTHAKAKNNQ 124

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 306 PSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI 365
           PSKT   ++ + C    C R F++S  L  H R HT ++P+ C IC ++F R DHL  H 
Sbjct: 11  PSKT---KKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65
Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK 398
             H+ EKPF C  CG+ F +S     H  +H++
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++ Y C    C + F+   +  RH+ +H G +P+ C +C + F    HL  H++ HTG K
Sbjct: 8   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 373 PFSCDVCGRKFARSDEKKRHA 393
           P+ C++C ++F   D   RH 
Sbjct: 65  PYECNICAKRFMWRDSFHRHV 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPF 374
           P+ C V  C + FSR D+L  H+R HTG KP++C+ C  + + S  L  H+R H+ E+PF
Sbjct: 8   PHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 375 SCDVC 379
            C +C
Sbjct: 66  KCQIC 70

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKP 373
           Y C   +C   ++++ +L  H+  HTG+KPF C+   C + F+   HLT H  THTGEK 
Sbjct: 4   YICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 63
Query: 374 FSCDV--CGRKFARSDEKKRH 392
           F+CD   C  +F      K+H
Sbjct: 64  FTCDSDGCDLRFTTKANMKKH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 320 VENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE--KPFSCD 377
            E C + F     L RH   H+G+KP+ C +C   F R D ++ H+R+H G   KP+ C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 378 VCGRKFARSDEKKRHAKVHLKQ 399
            CG+ F+R D    H   H+KQ
Sbjct: 70  SCGKGFSRPD----HLNGHIKQ 87

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 346 FQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA-KVH 396
           F C +C R+F+R +HL  H R+HT EKP+ C +C R F R D   RHA K+H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
           + C +  C + F RS  L+ H+ IH+  +P+ C+ C + F +   +  H   HTGEKP  
Sbjct: 2   FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 376 CDVCGRKFARSDEKKRHAKVH 396
           C VCG+ F++S     H++ H
Sbjct: 60  CQVCGKAFSQSSNLITHSRKH 80

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRT 367
           PV  + Y C   +C   ++++ +L  H+  HTG+KPF C+   C + F+   HLT H  T
Sbjct: 7   PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT 66
Query: 368 HTGEKPFSCDV--CGRKFARSDEKKRH 392
           HTGEK F+CD   C  +F      K+H
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKH 93

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 369
           E+PY C VE C + FSRS  L +H R+HTG+KP++C  C ++FS++  L  H R HT
Sbjct: 12  EKPYGC-VE-CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 351 CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           C +++ +S HL  H RTHTGEKPFSC    C R+FARSDE  RH + H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++PY C  + C   F     L  H  +HTG+KP++C IC   F+R  +L TH R H+GEK
Sbjct: 15  DKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Query: 373 P 373
           P
Sbjct: 73  P 73

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSR-SDHLTTHIRTHT 369
           E+P+ C  E C + +SR + L  H+R HTG+KP+ C    C ++FS  SD      RTH+
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 370 GEKPFSCDV--CGRKFARSDEKKRHAKV 395
            EKP+ C +  C +++      ++H K 
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           R Y C  + C + FS S +L++H R HTG+KP++C  C ++F +  HL  H R HTG  P
Sbjct: 17  RRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74
Query: 374 FS 375
            S
Sbjct: 75  SS 76

>pdb|1XF7|A Chain A, High Resolution Nmr Structure Of The Wilms' Tumor Suppressor Protein (Wt1) Finger 3 Length = 29

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           KPFQC+ C R FSRSDHL TH RTHTGEK
Sbjct: 1   KPFQCKTCQRKFSRSDHLKTHTRTHTGEK 29

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
           Y C V  C R +     L RH  IH+ +K + CR C + F  +++ T H   HTGE+ + 
Sbjct: 23  YICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ 80
Query: 376 CDVCGRKF 383
           C  CG+ F
Sbjct: 81  CLACGKSF 88

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIR---IHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 369
           E+P+ CP   C + + R + L  H     ++  ++ F C +C  +F R   L  H+ +HT
Sbjct: 33  EKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT 90
Query: 370 GEKPFSCDVCGRKFARSDEKKRHA-KVH 396
           GE P+ C  C ++F +  + + H  K+H
Sbjct: 91  GEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>pdb|2ENT|A Chain A, Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15 Length = 48

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKP 345
           E+P+AC    C  RFSRSDEL+RH R H+G KP
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KP++C++C ++F++  HL  H +THTGEKP
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           ++PF C  C +++  +  L+ H R H G +P SC  CG+ F    E  RH KVH
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH 55

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KPF+C+ C ++F ++ HL +H+R HTGEKP
Sbjct: 10  EKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           RP+ C    C +RF+RSDEL RH R HTG+K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KPF+C  C +SFS S  L TH R HTGEKP
Sbjct: 10  EKPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KP++C+ C ++FS++ HL  H R HTGEKP
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KPFQC  C + F+++ HL +H R HTGEKP
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +K ++C +C + FS+S HL TH R HTGEKP
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KP++C  C + F+++ HLT H R HTGEKP
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 347 QCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK 398
           +C  C + F  + +L  H+RTHTGEKP+ C+ C    A+    + H + H K
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK 57

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +KPF+C  C +S+++  HLT H R HTGEKP
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	451
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-44
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-25
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-40
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-30
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-23
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-38
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-36
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-36
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-35
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-31
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-30
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-27
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-28
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-28
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-28
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-19
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-28
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-27
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-25
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-19
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-27
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-23
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-25
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-24
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-24
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-20
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-23
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-22
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-22
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-22
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-22
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-20
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-21
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-21
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-18
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-18
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-17
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-13
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-17
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-16
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-16
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-16
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-16
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-12
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-16
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-16
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-16
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	9e-16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-15
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-15
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-15
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-15
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-15
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-15
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-14
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-13
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	2e-11
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	8e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-08
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	6e-07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	8e-07
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	2e-06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	3e-04
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	2e-06
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	3e-05
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	6e-04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	3e-06
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	3e-05
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	6e-05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	7e-05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	8e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	2e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	5e-04
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	7e-04

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  149 bits (378), Expect = 2e-44
 Identities = 74/84 (88%), Positives = 81/84 (96%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPYACPVE+CDRRFS+S  LTRHIRIHTGQKPFQCRICMR+FSRSDHLTTHIRTHTGEK
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           PF+CD+CGRKFARSDE+KRH K+H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 99.1 bits (248), Expect = 1e-25
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 2/60 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++P+ C    C R FSRSD LT HIR HTG+KPF C IC R F+RSD    H + H  +K
Sbjct: 32  QKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  138 bits (350), Expect = 3e-40
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 304 NRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHL 361
                     R + C    C + +++S  L  H+R HTG+KP++C    C   F+RSD L
Sbjct: 4   GSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63

Query: 362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           T H R HTG KPF C VC R F+RSD    H K H
Sbjct: 64  TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  112 bits (283), Expect = 1e-30
 Identities = 38/57 (66%), Positives = 43/57 (75%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 369
           E+PY C  E CD RF+RSDELTRH R HTG KPFQC +C RSFSRSDHL  H++ H 
Sbjct: 43  EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 93.8 bits (234), Expect = 1e-23
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 327 FSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC--DVCGRKFA 384
              S       RIH    P     C + +++S HL  H+RTHTGEKP+ C  + C  +FA
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 385 RSDEKKRHAKVH 396
           RSDE  RH + H
Sbjct: 59  RSDELTRHYRKH 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score =  133 bits (336), Expect = 1e-38
 Identities = 56/73 (76%), Positives = 61/73 (83%)

Query: 297 VKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFS 356
           ++P    N  +      RPYACPVE+CDRRFSRSDELTRHIRIHTGQKPFQCRICMR+FS
Sbjct: 1   MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 357 RSDHLTTHIRTHT 369
           RSDHLTTHIRTHT
Sbjct: 61  RSDHLTTHIRTHT 73

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  128 bits (325), Expect = 1e-36
 Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHT 369
               + C    C + +++S  L  H+R HTG+KP+ C    C   F+RSD LT H R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 370 GEKPFSCDVCGRKFARSDEKKRHAKVHL 397
           G +PF C  C R F+RSD    H K H 
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  129 bits (327), Expect = 2e-36
 Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 2/86 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C  ++C+RRFSRSD+L RH R HTG KPFQC+ C R FSRSDHL TH RTHTGEK
Sbjct: 34  EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 373 PFSCDV--CGRKFARSDEKKRHAKVH 396
           PFSC    C +KFARSDE  RH  +H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  124 bits (315), Expect = 6e-35
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTG 370
           +RP+ C    C++R+ +   L  H R HTG+KP+QC    C R FSRSD L  H R HTG
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 371 EKPFSCDVCGRKFARSDEKKRHAKVH 396
            KPF C  C RKF+RSD  K H + H
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.1 bits (196), Expect = 3e-18
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 341 TGQKPFQC--RICMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           + ++PF C    C + + +  HL  H R HTGEKP+ CD   C R+F+RSD+ KRH + H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  114 bits (288), Expect = 3e-31
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           +P+ C    C R FSRSD LT HIR HTG+KPF C IC R F+RSD    H        P
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILP 58

Query: 374 FSCDVCGRKFARSD---EKKRHAKVH 396
              D      +++     +    K  
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 88.3 bits (220), Expect = 8e-22
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI---RTHT 369
           E+P+AC  + C R+F+RSDE  RH  I     P          S++ HL   +   +   
Sbjct: 29  EKPFAC--DICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLV 85

Query: 370 GEK 372
           GE+
Sbjct: 86  GER 88

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score =  111 bits (281), Expect = 2e-30
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 312 HERPYACPVENCDRRFSRSDELTRHIRI-HTGQKPFQC--RICMRSFSRSDHLTTHIRTH 368
                 C    C R FS    L  H +  H  QK F C    C +SF+   HL  H++ H
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

Query: 369 TGEKPFSCDVCGRKF 383
           +  + + C+  G   
Sbjct: 64  SDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 79.5 bits (197), Expect = 9e-19
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 340 HTGQKPFQCRI--CMRSFSRSDHLTTHIR-THTGEKPFSCD--VCGRKFARSDEKKRHAK 394
            +G     C    C R FS   +L  H +  H  +K FSC    CG+ F      K H K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 395 VH 396
           +H
Sbjct: 62  LH 63

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  111 bits (280), Expect = 4e-30
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
             P+ C  E C + FSR D+L  H+R HTG KP++C+ C  + + S  L  H+R H+ E+
Sbjct: 6   SGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           PF C +C      S +   H + H
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 97.9 bits (245), Expect = 3e-25
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
            +PY C  + CD   + S  L +H+RIH+ ++PF+C+IC  +   S  LT H+R+HTG+ 
Sbjct: 34  VKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS 91

Query: 373 PFSC 376
             S 
Sbjct: 92  GPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 82.1 bits (204), Expect = 2e-19
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
                P +C +C + FSR D L TH+R HTG KP+ C  C    A S    +H ++H
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 367 THTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +     P  C+VCG+ F+R D+ K H + H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH 31

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  111 bits (280), Expect = 2e-29
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRSFSRSDHLTTH-IRTHT 369
           E+P+ C  E C + +SR + L  H+R HTG+KP+ C    C ++FS +     H  RTH+
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 370 GEKPFSCDV--CGRKFARSDEKKRHAKVH 396
            EKP+ C +  C +++      ++H K  
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  105 bits (264), Expect = 3e-27
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 12/94 (12%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHI---RIHTGQKPFQCRIC-----MRSFSRSDHLTTH 364
           E       + C + F   ++L  HI    IH  +K F C        +R F     L  H
Sbjct: 1   ETDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 365 IRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           +R HTGEKP  C    C + ++R +  K H + H
Sbjct: 59  MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 85.0 bits (211), Expect = 7e-20
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHI-RIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHT 369
           E+PY C  E C + FS + +  +H  R H+ +KP+ C++  C + ++    L  H++T  
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

Query: 370 G 370
           G
Sbjct: 155 G 155

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  109 bits (274), Expect = 7e-29
 Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTG 370
            R + C    C + F  S +L RH  +HTG+KPFQC    C + FS   +L TH+R HTG
Sbjct: 32  PRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

Query: 371 EKPFSCDV--CGRKFARSDEKKRHAKVH 396
           ++P+ C    C +KFA+S   K H   H
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  107 bits (271), Expect = 2e-28
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 370
           +  R  ACP + C + F  +  + +H+  H G +   C  C ++F  S  L  H   HTG
Sbjct: 1   MEPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG 59

Query: 371 EKPFSCDV--CGRKFARSDEKKRHAKVH 396
           EKPF C    CG++F+     + H ++H
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 98.7 bits (247), Expect = 3e-25
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTG 370
           E+P+ C  E C +RFS    L  H+RIHTG +P+ C    C + F++S +L +HI TH  
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

Query: 371 EKPF 374
            K  
Sbjct: 120 AKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQ 347
           +RPY CP + C+++F++S  L  HI  H   K  Q
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  105 bits (265), Expect = 4e-28
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRSFSRSDHLTTHIRTHTGEKP 373
           Y C  ENC + F + ++L  H   HT Q P++C    C + FS    L  H + H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 374 FSCDVCGRKFARSDE-KKRHAKVH 396
              D C           K  A+ H
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 86.5 bits (215), Expect = 3e-21
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI-RTH 368
           + PY CP E CD+RFS    L RH ++H G    +   C            H+   H
Sbjct: 29  QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  105 bits (265), Expect = 6e-28
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE- 371
               AC  E C + F     L RH   H+G+KP+ C +C   F R D ++ H+R+H G  
Sbjct: 5   SSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62

Query: 372 -KPFSCDVCGRKFARSDEKKRHAK 394
            KP+ C  CG+ F+R D    H K
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 84.5 bits (210), Expect = 2e-20
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
            +G     C IC + F    HL  H  +H+GEKP+SC VCG +F R D    H + H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 5/63 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG--QKPFQCRICMRSFSRSDHLTTHI-RTHT 369
           E+PY+CPV  C  RF R D ++ H+R H G   KP+ C+ C + FSR DHL  HI + H+
Sbjct: 33  EKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

Query: 370 GEK 372
           G  
Sbjct: 91  GPS 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  105 bits (265), Expect = 8e-28
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++ + C  + C R F++S  L  H R HT ++P+ C IC ++F R DHL  H   H+ EK
Sbjct: 15  KKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK 72

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           PF C  CG+ F +S     H  +H
Sbjct: 73  PFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 92.1 bits (230), Expect = 6e-23
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK 389
           S   +        +K F C+ C R F++S +L  H RTHT E+P++CD+C + F R D  
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 390 KRHAKVH 396
           + H  +H
Sbjct: 62  RDHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 91.0 bits (227), Expect = 1e-22
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ERPY C  + C + F R D L  H  IH+ +KPF+C+ C + F +S  L  H   H    
Sbjct: 43  ERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

Query: 373 PFSC 376
             + 
Sbjct: 101 SPTA 104

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  106 bits (267), Expect = 1e-27
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 11/95 (11%)

Query: 313 ERPY----ACPVENCDRR---FSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTT 363
             P      C  E C R    F    +L  HIR+HTG+KPF C    C + F+RS++L  
Sbjct: 51  GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110

Query: 364 HIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           H RTHTGEKPF C+   C R+FA S ++K+H  VH
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  103 bits (260), Expect = 1e-26
 Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 13/95 (13%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQ---------CRICMRSFSRSDHLTT 363
           +       ++CDR FS   EL  H+ +     P Q         C    +SF     L  
Sbjct: 23  QLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 364 HIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           HIR HTGEKPF C    CG+ FARS+  K H + H
Sbjct: 81  HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  101 bits (253), Expect = 1e-25
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 311 VH--ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIR 366
           VH  E+P+ CP   C + F+RS+ L  H R HTG+KPF+C    C R F+ S     H+ 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143

Query: 367 THTGEKPFSCD 377
            HT +K     
Sbjct: 144 VHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 84.3 bits (209), Expect = 1e-19
 Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 9/84 (10%)

Query: 322 NCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS------ 375
           +         +      I   Q     + C R+FS    L TH+       P        
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 376 ---CDVCGRKFARSDEKKRHAKVH 396
              C   G+ F    +   H +VH
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVH 85

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  106 bits (266), Expect = 5e-27
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRSFSRSDHLTTHIRTHTG 370
            + Y C   +C   ++++ +L  H+  HTG+KPF C    C + F+   HLT H  THTG
Sbjct: 10  YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69

Query: 371 EKPFSCD--VCGRKFARSDEKKRHAKVH 396
           EK F+CD   C  +F      K+H    
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  100 bits (251), Expect = 7e-25
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRSFSRSDHLTTHIRTHTG 370
           E+P+ C  E C++ F+    LTRH   HTG+K F C    C   F+   ++  H      
Sbjct: 40  EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99

Query: 371 EK--PFSCDV--CGRKFARSDEKKRHAKVH 396
            K   + C    CG+ F + ++ K H   H
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 15/106 (14%)

Query: 304 NRPSKTPVHER--------PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMR 353
              +    H           Y C  ENC + F + ++L  H   HT Q P++C    C +
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144

Query: 354 SFSRSDHLTTHIRTHTG---EKPFSCDVCGRKFARSDEKKRHAKVH 396
            FS    L  H + H G   +K  SC   G+ +  +   K  A+ H
Sbjct: 145 RFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW--TLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 80.7 bits (200), Expect = 6e-18
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 336 HIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKFARSDEKKR 391
              +    K + C    C  +++++  L  H+  HTGEKPF C    C + F       R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 392 HAKVH 396
           H+  H
Sbjct: 63  HSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 63.0 bits (154), Expect = 8e-12
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSR-SDHLTTHIRTHT 369
           + PY CP E CD+RFS    L RH ++H G    +   C       + +L      H 
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  101 bits (254), Expect = 3e-26
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 11/88 (12%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++ Y C    C + F+   +  RH+ +H G +P+ C +C + F    HL  H++ HTG K
Sbjct: 8   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64

Query: 373 PFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           P+ C++C ++F   D           + 
Sbjct: 65  PYECNICAKRFMWRD--------SFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 92.9 bits (232), Expect = 3e-23
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
            RPY C    C ++F     L  H++IHTG KP++C IC + F   D    H    +  K
Sbjct: 35  LRPYGC--GVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTK 90

Query: 373 PFSCDVCGRKFARS 386
            +      +    +
Sbjct: 91  SYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 79.0 bits (196), Expect = 4e-18
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +G K + C+ C +SF+       H+  H G +P+ C VCG+KF        H K+H
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTT 363
            +PY C    C +RF   D    H  + +  K ++     ++ + +   ++
Sbjct: 63  IKPYEC--NICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (261), Expect = 3e-26
 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PYACP   C + FS+   L  H R HTG+KP++C  C +SFSR D+L TH RTHTGEK
Sbjct: 103 EKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK 160

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           P+ C  CG+ F+R D    H + H
Sbjct: 161 PYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  103 bits (259), Expect = 5e-26
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C    C + FS   +LTRH R HTG+KP++C  C +SFS+  +L  H RTHTGEK
Sbjct: 47  EKPYKC--PECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEK 104

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           P++C  CG+ F++    + H + H
Sbjct: 105 PYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  102 bits (257), Expect = 9e-26
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PYAC    C + FSRSD L  H R HTG+KP++C  C +SFS    LT H RTHTGEK
Sbjct: 19  EKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEK 76

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           P+ C  CG+ F++    + H + H
Sbjct: 77  PYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  102 bits (256), Expect = 1e-25
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C    C + FS+   L  H R HTG+KP+ C  C +SFS+  HL  H RTHTGEK
Sbjct: 75  EKPYKC--PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK 132

Query: 373 PFSCDVCGRKFARSDEKKRHAKVH 396
           P+ C  CG+ F+R D    H + H
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 96.0 bits (240), Expect = 2e-23
 Identities = 30/70 (42%), Positives = 39/70 (55%)

Query: 327 FSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS 386
              S        +  G+KP+ C  C +SFSRSDHL  H RTHTGEKP+ C  CG+ F+  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 387 DEKKRHAKVH 396
            +  RH + H
Sbjct: 63  KDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.3 bits (215), Expect = 7e-20
 Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C    C + FSR D L  H R HTG+KP++C  C +SFSR D L  H RTHTG+K
Sbjct: 131 EKPYKC--PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

Query: 373 P 373
            
Sbjct: 189 T 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.5 bits (140), Expect = 6e-10
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 354 SFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           S   S           GEKP++C  CG+ F+RSD    H + H
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  100 bits (251), Expect = 1e-25
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIR---THT 369
                CP   C ++F     L  H R HTG+KPF+C  C + + R ++L  H      + 
Sbjct: 5   SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 370 GEKPFSCDVCGRKFARSDEKKRHAKVH 396
            E+ F+C VC   F R  E + H   H
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIR---IHTGQKPFQCRICMRSFSRSDHLTTHIRTHT 369
           E+P+ CP   C + + R + L  H     ++  ++ F C +C  +F R   L  H+ +HT
Sbjct: 33  EKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT 90

Query: 370 GEKPFSCDVCGRKFARSDEKKRH-AKVH 396
           GE P+ C  C ++F +  + + H  K+H
Sbjct: 91  GEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.0 bits (201), Expect = 1e-18
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH-IRTHTGE 371
           E+ + C V  C   F R  EL  H+  HTG+ P++C  C + F +   L +H I+ H+G 
Sbjct: 64  EQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

Query: 372 K 372
            
Sbjct: 122 S 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 75.6 bits (187), Expect = 7e-17
 Identities = 19/53 (35%), Positives = 26/53 (49%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH 392
            +G    +C  C + F    +L  H R HTGEKPF C  CG+ + R +    H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.4 bits (93), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 368 HTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
            +G     C  C +KF      K H + H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKH 30

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 97.9 bits (245), Expect = 2e-25
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
           + C  + C + F RS  L+ H+ IH+  +P+ C+ C + F +   +  H   HTGEKP  
Sbjct: 2   FDC--KICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 376 CDVCGRKFARSDEKKRHAKVH 396
           C VCG+ F++S     H++ H
Sbjct: 60  CQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 81.3 bits (202), Expect = 2e-19
 Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 370
            RPY C  + C +RF +  ++ +H  IHTG+KP +C++C ++FS+S +L TH R HTG
Sbjct: 27  TRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 94.9 bits (237), Expect = 3e-24
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE--KPFSCDVCGRKFARSDEKK 390
                R H+G+KP++C IC   F++S  +  HI     E    F C  C    AR  +  
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 391 RH 392
            H
Sbjct: 63  VH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG--QKPFQCRICMRSFSRSDHLTTHIRT-HT 369
           E+PY C +  C  RF++S  +  HI          F C  C    +R   L  H+R  H+
Sbjct: 13  EKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

Query: 370 GEKPFS 375
              P S
Sbjct: 71  YSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.5 bits (145), Expect = 9e-12
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  RTH+GEKP+ C +C  +F +S   K H    
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK 38

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 93.7 bits (234), Expect = 1e-23
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG----QKPFQCRICMRSFSRSDHLTTHIRTH 368
           E+PYAC   +CD+ F +   L  H + +         F C  C ++F+R + +  H    
Sbjct: 13  EKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC 70

Query: 369 TGEKPFSCDVCGRKF 383
            G      +  G   
Sbjct: 71  AGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE----KPFSCDVCGRKFARSDE 388
                R HTG+KP+ C  C ++F +   L  H + +         F C  CG+ F R + 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 389 KKRHAKVH 396
             RHA   
Sbjct: 63  MARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 360 HLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  RTHTGEKP++C  C + F +      H K +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 38

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRT--HTGEKPFSCDVCGRKFARSDEKKRHAKV 395
               G+  ++C++C R ++   +   H  T      K + C  C ++F R D    H K+
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 396 H 396
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 86.1 bits (214), Expect = 3e-21
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRI--HTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 370
           E  Y C V  C R ++      RH         K + C  C + F+R D++T H++    
Sbjct: 8   EHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 90.1 bits (224), Expect = 1e-22
 Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 330 SDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFAR 385
           S   +      +  +   C    C +++ +S HL  H RTHTGEKPFSC    C R+FAR
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 386 SDEKKRHAKVH 396
           SDE  RH + H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 86.3 bits (214), Expect = 3e-21
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 300 RKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSR 357
               + P       R + C    C + + +S  L  H R HTG+KPF C    C R F+R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 358 SDHLTTHIRTH 368
           SD L+ H RTH
Sbjct: 62  SDELSRHRRTH 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 90.2 bits (225), Expect = 1e-22
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK 389
                 H  +    KP++C  C  SF    +L +H   HTGEKP+ C++CG +F R    
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 390 KRHAKVH 396
           K H ++H
Sbjct: 62  KTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 88.3 bits (220), Expect = 5e-22
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           ++PY C  + C   F     L  H  +HTG+KP++C IC   F+R  +L TH R H+GEK
Sbjct: 15  DKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

Query: 373 PF 374
           P+
Sbjct: 73  PY 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 89.1 bits (222), Expect = 3e-22
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query: 333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH 392
            +    IH+G+KP+ C  C ++FSRS  L  H R HTGEKP+ C  CG+ F+++     H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 393 AKVH 396
            ++H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 86.4 bits (215), Expect = 3e-21
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           E+PY C    C + FSRS  L +H R+HTG+KP++C  C ++FS++  L  H R HT   
Sbjct: 12  EKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

Query: 373 PF 374
             
Sbjct: 70  SS 71

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 88.3 bits (220), Expect = 4e-22
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGEK 372
           R + C V  C R F+R + L RH R HT +KP+ C +C R+F+R D L  H  + H+G  
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 84.1 bits (209), Expect = 1e-20
 Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA-KVH 396
           + F C +C R+F+R +HL  H R+HT EKP+ C +C R F R D   RHA K+H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 88.3 bits (220), Expect = 7e-22
 Identities = 26/67 (38%), Positives = 36/67 (53%)

Query: 330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK 389
           S    R       ++ ++C  C +SFS S  L+ H RTHTGEKP+ CD CG+ F +    
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 390 KRHAKVH 396
             H +VH
Sbjct: 63  IGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.0 bits (214), Expect = 4e-21
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
            R Y C  + C + FS S +L++H R HTG+KP++C  C ++F +  HL  H R HTG  
Sbjct: 16  RRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

Query: 373 PF 374
           P 
Sbjct: 74  PS 75

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 85.2 bits (212), Expect = 6e-21
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
             P  C    C    S    L  H RIH   +PF+C  C     +  +L+ H++   G+ 
Sbjct: 7   GHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

Query: 373 PFSC 376
               
Sbjct: 65  SGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.6 bits (200), Expect = 3e-19
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +   P +C  C  S S    L  H R H  ++PF C+ C     +     +H K  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 83.6 bits (207), Expect = 3e-20
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHT---GEKPFSCDVCGRKFARSDEKKRHAKVH 396
            +G    QC IC  +  +   L  H R H        F C+ CG++F + D    H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 12/73 (16%), Positives = 18/73 (24%), Gaps = 5/73 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHT---GQKPFQCRICMRSFSRSDHLTTHIRTHT 369
                C +  C     +   L  H R H        F C  C + F + D +  H     
Sbjct: 5   SSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 370 GEKPFSCDVCGRK 382
                +       
Sbjct: 63  PALLLAPQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 6/36 (16%), Positives = 13/36 (36%)

Query: 368 HTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK 403
            +G     C++CG    +      H + H +  +  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAAL 37

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 76.8 bits (190), Expect = 4e-18
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGEKPFSCDVCGRKFA 384
                +  KP+ C+ C + FSR DHL  HI + HT E+P  C V     +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRSFS 356
            +PY C  ++C + FSR D L  HI ++HT ++P +C++ +   S
Sbjct: 10  GKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAK-VH 396
           +   + +  KP+ C  CG+ F+R D    H K VH
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 76.2 bits (188), Expect = 6e-18
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 336 HIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                TG+KPF C    C   FSRSD L+ H R+H+G KP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 73.9 bits (182), Expect = 4e-17
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+AC    C  RFSRSDEL+RH R H+G KP   
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 61.9 bits (151), Expect = 7e-13
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 363 THIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH 396
           +   + TGEKPF+C    CG +F+RSDE  RH + H
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 75.0 bits (184), Expect = 5e-17
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 311 VHERPYACPVENCDRRFSRSDELTRHI-RIHTGQKPFQCRICM--------RSFSRSDHL 361
           + E   + P ++CDR FS   EL  H+   H G       +C         +SF     L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 362 TTHIRTHTGEKPFSC 376
             HIR HTGEK    
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 9/67 (13%)

Query: 339 IHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGEKPFSCDVC--------GRKFARSDEK 389
           I   Q     + C R+FS    L TH+   H G    +  VC        G+ F    + 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 390 KRHAKVH 396
             H +VH
Sbjct: 79  VNHIRVH 85

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.9 bits (180), Expect = 9e-17
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KP++C  C ++F R  HL  H R HTG +P   
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 9e-09
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F R   L  H RIHTG +P   
Sbjct: 10  EKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ C  CG+ F R      H ++H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 72.1 bits (178), Expect = 2e-16
 Identities = 21/42 (50%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KPF+C  C +SFS S  L TH R HTGEKP   
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C + FS S +L  H RIHTG+KP   
Sbjct: 10  EKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  CG+ F+ S +   H ++H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KPF+C+ C ++F ++ HL +H+R HTGEKP   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  + C + F ++  L  H+RIHTG+KP   
Sbjct: 10  EKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKPF C  CG+ F ++     H ++H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KPF+C  C +S+++  HLT H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C + +++   LT+H R+HTG+KP   
Sbjct: 10  EKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  CG+ + +     +H +VH
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.7 bits (177), Expect = 2e-16
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C + F R+ HL  H   HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F R+  L RH  IHTG+KP   
Sbjct: 10  EKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F R+    RH  +H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 3e-16
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                  G+KP+ C  C ++FS   +L  H+RTH+GEKP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS    L  H+R H+G+KP   
Sbjct: 10  EKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GEKP+ C  CG+ F+       H + H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.4 bits (176), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+ P++C  C ++FSR   L +H RTH GEKP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E PY C    C + FSR  +L  H R H G+KP   
Sbjct: 10  ENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE P+ C  CG+ F+R  +   H + H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KPF+C  C ++F+   +L  H RTHTGEKP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C + F+    L  H R HTG+KP   
Sbjct: 10  EKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  C + F        H + H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                TG+KPF+C IC +SF     L  H   HT EKP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF CD+CG+ F       RH+ VH
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  + C + F     L RH  +HT +KP   
Sbjct: 10  EKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 70.8 bits (174), Expect = 4e-16
 Identities = 20/33 (60%), Positives = 21/33 (63%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH 368
             R  TG KPFQC  C RSFSRSDHL  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 58.9 bits (143), Expect = 7e-12
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL 397
             R  TG KPF C  C R F+RSD    H K H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIH 340
            +P+ CP   CDR FSRSD L  H + H
Sbjct: 9   IKPFQCPD--CDRSFSRSDHLALHRKRH 34

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C++C ++F++  HL  H +THTGEKP   
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  + C + F++   L +H + HTG+KP   
Sbjct: 10  EKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C VC + F +     +H K H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG KP+ C  C ++F    +L  H RTHTGE   S 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            +PY C    C + F     L  H R HTG+     
Sbjct: 10  MKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG KP+ C+ CG+ F        H + H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KPFQC  C + F+++ HL +H R HTGEKP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  E C +RF+++  L  H R+HTG+KP   
Sbjct: 10  EKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKPF C+ CG++F ++     H +VH
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 70.6 bits (174), Expect = 5e-16
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG KP+ C  C ++FS    L  H R+HTG KP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            +PY C    C + FS   +L  H R HTG KP   
Sbjct: 10  VKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG KP+ C  C + F+   +   H + H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 5e-16
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C++C ++F  S HL  H   H+GE+P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  + C + F  S  L +H  +H+G++P   
Sbjct: 10  EKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + TGEKP+ C VCG+ F  S    +H  VH
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 6e-16
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KP++C  C + F+++ HLT H R HTGEKP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+++  LT H RIHTG+KP   
Sbjct: 10  EKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ C+ CG+ F ++     H ++H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 70.2 bits (173), Expect = 6e-16
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+K ++C  C + FSR+  L+ H + HTGEKP   
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+ Y C    C + FSR+ +L++H +IHTG+KP   
Sbjct: 10  EKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEK + C+ CG+ F+R+ +  +H K+H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                 TG+KP+ C +C ++F  S HL  H+R HT E      
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY+C V  C + F  S  L +H+R+HT +     
Sbjct: 10  EKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + TGEKP+SC+VCG+ F  S    +H +VH
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KPF+C  C + F+++  L +H R HTGEKP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  E C +RF+++ +L  H R+HTG+KP   
Sbjct: 10  EKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-07
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKPF C+ CG++F ++ +   H +VH
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 G+K ++C +C + FS+S HL TH R HTGEKP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+ Y C  + C + FS+S  L  H R+HTG+KP   
Sbjct: 10  EKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GEK + CDVCG++F++S   + H +VH
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 8e-16
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG++P +C  C +SF +S HL  H R HTGEKP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ERP+ C    C + F +S  L +H RIHTG+KP   
Sbjct: 10  ERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE+P  C+ CG+ F +S    +H ++H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 8e-16
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C + F+++ HL  H   HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+++  L RH  IHTG+KP   
Sbjct: 10  EKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F ++    RH  +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 9e-16
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+K + C+ C +SFSR+  L  H R H+GEKP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+ Y C  + C + FSR+  L +H R+H+G+KP   
Sbjct: 10  EKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEK ++C  CG+ F+R+    +H ++H
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 9e-16
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                +G++P+ C  C ++F R  HL  H++ H  EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ERPY C    C + F R   L  H++ H  +K    
Sbjct: 10  ERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + +GE+P+ C+ CG+ F R      H K H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP +CR C +SFS +  L  H R HTGE P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C + FS + +L  H RIHTG+ P   
Sbjct: 10  EKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP  C  CG+ F+ + +   H ++H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TGQKPF+C  C +SF    +L TH R HTGEK    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ++P+ C   +C + F     L  H RIHTG+K    
Sbjct: 10  QKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG+KPF C  CG+ F        H ++H
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 69.8 bits (172), Expect = 1e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C ++F+   +L  H RTHTGE   S 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+    L  H R HTG+     
Sbjct: 10  EKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ C + F        H + H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCG 380
                +G+KPF+C  C + F  +    +H R+H+GEKP      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  E C + F  + +   H R H+G+KP   
Sbjct: 10  EKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKPF C+ CG+ F  + +   H + H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C+ C ++FS++ HL  H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR 349
           E+PY C  + C + FS++  L +H R+HTG+KP    
Sbjct: 10  EKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F+++    +H +VH
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP+ C  C ++F     L  H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-08
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  E C + F    +L  H RIHTG+KP   
Sbjct: 10  EKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP++C+ CG+ F    + + H ++H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KP++C  C ++F     L  H RTH G    S 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F     L  H R H G      
Sbjct: 10  EKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ C+ CG+ F        H + H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C + F+++ HL  H R HTG KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+++  L  H RIHTG KP   
Sbjct: 10  EKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F ++     H ++H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 18/42 (42%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KPF+C  C + FSR   L  H + HTGEKP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C + FSR   L  H ++HTG+KP   
Sbjct: 10  EKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  CG+ F+R      H K+H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.4 bits (171), Expect = 1e-15
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG++ ++C  C ++F+R   L  H R HTGEKP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ER Y C    C + F+R   L  H RIHTG+KP   
Sbjct: 10  ERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE+ + C  CG+ FAR      H ++H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C IC +SF++   L  H + HTGEKP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F++  +L  H +IHTG+KP   
Sbjct: 10  EKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C +CG+ F +  +   H ++H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TGQ+P++C  C ++F     L  H R+HTGEKP   
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           +RPY C    C + F     L  H R HTG+KP   
Sbjct: 10  QRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG++P+ C  CG+ F        H + H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP+ C+ C +SF  +  L  H R H+GEKP   
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.0 bits (115), Expect = 5e-08
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  + C + F  +  L +H R+H+G+KP   
Sbjct: 10  EKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP++C  CG+ F  +    +H +VH
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++F+R   L  H ++HTGE+    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C   +C + F+R   L  H + HTG++    
Sbjct: 10  EKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F R      H + H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           RP+ C    C +RF+RSDEL RH R HTG+K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 372 KPFSCDV--CGRKFARSDEKKRHAKVHLKQR 400
           +PF C    CG++F RSDE +RH + H  ++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++F++  +LT H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F++   LT+H RIHTG+KP   
Sbjct: 10  EKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ FA+     +H ++H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C + F+++ HL  H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+++  L RH  IHTG+KP   
Sbjct: 10  EKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F ++    RH  +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
                 G+KP++C  C   F +  HL  H+  HTG  P S
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 346
           E+PY C  E C  RF +   L  H+ IHTG  P 
Sbjct: 9   EKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  GEKP+ C+ CG +F +    + H  +H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG KP+ C  C ++FS    LTTH   HTGEKP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            +PY C    C + FS    LT H  IHTG+KP   
Sbjct: 10  VKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG KP+ C+ CG+ F+       H  +H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG K F+C  C ++F+R   L+ H + HTGEKP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            + + C    C + F+R   L+ H +IHTG+KP   
Sbjct: 10  GKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG K F C  CG+ F R      H K+H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++FS++  L  H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS++ +L RH RIHTG+KP   
Sbjct: 10  EKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 23/34 (67%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F+++ +  RH ++H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                +G+KP++C  C + + R   L  H R HTGEK     
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + + R  +L  H R+HTG+K    
Sbjct: 10  EKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ C  CG+ + R  +   H +VH
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C +C ++FS    L+ H R H+G+KP   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS    L+ H RIH+G+KP   
Sbjct: 10  EKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + TGEKP+ C VCG+ F+       H ++H
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KPF C  C ++FS    L  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C   +C + FS    L +H RIHTG+KP   
Sbjct: 10  EKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  CG+ F+      +H ++H
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C + F+++ HL  H   HTGEKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ++PY C    C + F+++  L RH  IHTG+KP   
Sbjct: 10  KKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG+KP+ C+ CG+ F ++    RH  +H
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP+ C  C +SF +  HL  H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F +   L RH RIHTG+KP   
Sbjct: 10  EKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F +     RH ++H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KP+ C  C ++F  S  L  H R HTGEKP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR 349
           E+PY C  + C + F  S EL RH RIHTG+KP    
Sbjct: 10  EKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ CD CG+ F  S E  RH ++H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C + F  + +L+ H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F  +  L+RH RIHTG+KP   
Sbjct: 10  EKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F  +    RH ++H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 15/40 (37%), Positives = 19/40 (47%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
                 G+KP+ C IC   F     L +H+R HTG  P S
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  GEKP+ C++CG +F      K H ++H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 346
           E+PY C  E C  RF     L  H+RIHTG  P 
Sbjct: 9   EKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C +C ++FS    LT H R H+GEKP   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  + C + FS    LT+H R+H+G+KP   
Sbjct: 10  EKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ CDVC + F+      +H +VH
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                +G+KP+ C  C ++FS+   L+ H RTHTGEKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS+   L+ H R HTG+KP   
Sbjct: 10  EKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GEKP+ C+ CG+ F++      H + H
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++F     L  H  TH+GEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F     L  H   H+G+KP   
Sbjct: 10  EKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F        H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++FS    LTTH   HTG+KP   
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS    LT H  IHTG+KP   
Sbjct: 10  EKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F+       H  +H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C + ++   +L  H + HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  E C + ++    L  H ++HTG++P   
Sbjct: 10  EKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ +        H KVH
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 5e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C + F+++ HL  H R HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+++  L RH R+HTG KP   
Sbjct: 10  EKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F ++    RH +VH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 5e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C ++F    +LTTH   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F     LT H  IHTG+KP   
Sbjct: 10  EKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F        H  +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG++P+ C +C ++F+   +L  H + HTGEKP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ERPY C V  C + F+    L +H +IHTG+KP   
Sbjct: 10  ERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE+P+ C VCG+ F       +H K+H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                + +KP++C  C + ++R  +L  H R H GEK    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  E+C + ++R   L  H R+H G+K    
Sbjct: 10  EKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 3e-07
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + + EKP+ C+ CG+ + R      H +VH
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+ PF C  C + F+   +L  H + HTGE+P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E P+ C    C + F+    L  H +IHTG++P   
Sbjct: 10  ENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE PF C  CG+ F        H K+H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C ++F  +   T H R HTG++P   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 5e-08
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F  +   T+H R+HTGQ+P   
Sbjct: 10  EKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F  +    +H ++H
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C +SF +   L  H R HTGE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C   +C + F +  +L  H RIHTG+ P   
Sbjct: 10  EKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F +  +   H ++H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C +C +SF     LT H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  + C + F     LT H RIHTG+KP   
Sbjct: 10  EKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ CDVC + F        H ++H
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 1e-14
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 G+K F+C  C ++F++S  LT H R HTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ++ + C    C + F++S  LT H RIHTG+KP   
Sbjct: 10  KKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  G+K F C+ C + F +S     H ++H
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 1e-14
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG KP+QC  C ++FS++  L  H R HTGEKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            +PY C    C + FS++ +L RH R+HTG+KP   
Sbjct: 10  GKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TG KP+ C+ CG+ F+++ +  RH +VH
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C + F     L TH   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C  E C + F    +L  H  +HTG+KP   
Sbjct: 10  EKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 7e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C+ CG+ F    +   H  VH
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                TG+KPFQC+ C  +FS S  L  H+R+H    P    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKPF C  CG  F+ S    +H + H
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C  + C   FS S  L +H+R H    P   
Sbjct: 10  EKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP+ C  C ++F+   +L  H + HT +KP   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+    L +H +IHT QKP   
Sbjct: 10  EKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F       +H K+H
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP++C  C ++F+   +L TH + HTGEKP   
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + F+    L  H +IHTG+KP   
Sbjct: 10  EKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F        H K+H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
                 G+KP++C  C ++FS+   L  HIR HTG  P S
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  GEKP+ CD CG+ F++      H +VH
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 346
           E+PY C  + C + FS+   L  HIR+HTG  P 
Sbjct: 9   EKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
              +G+ P++C  C ++F+R D L +H RTH GE   S 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E PY C    C + F+R D+L  H R H G+     
Sbjct: 8   ENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +GE P+ C  CG+ F R D+   H + H
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+KP++C  C +SF+    L  H + HTGE+    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C   +C + F+    L  H + HTG++    
Sbjct: 10  EKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP+ C  CG+ F      + H K H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG++ ++C  C ++F +   L+ H R H GEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ER Y C    C + F +   L+ H RIH G+KP   
Sbjct: 10  ERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE+ + C  CG+ F +      H ++H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 3e-14
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 G+KP+QC  C +SFS S  LT H  THT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY C    C + FS S  LT+H   HT +KP   
Sbjct: 10  EKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GEKP+ C  CG+ F+ S    +H   H
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G++PF+C  C + F R  HL  H+R H+ EK    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ERP+ C    C + F R   L  H+R+H+ +K    
Sbjct: 10  ERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +GE+PF C+ CG+ F R      H ++H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.6 bits (161), Expect = 4e-14
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                TG+ P++C  C + FSR D L +H +TH+G+   S 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E PY C    C + FSR D+L  H + H+GQ     
Sbjct: 10  ENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGE P+ C  CG+ F+R D+   H K H
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +G+KP++C+ C ++F +  HL  H R HTGE+    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ++PY C  + C + F +   L +H R+HTG++    
Sbjct: 10  KKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +G+KP+ C  C + F +     +H +VH
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 64.5 bits (158), Expect = 7e-14
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
              +G+KPF C  C ++FS   +L  H +TH  EKP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P+ C    C++ FS    L  H + H  +KP   
Sbjct: 8   EKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +GEKPF C  C + F+       H + H
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                  G++  +C  C + F ++ +   H R HTGEKP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ER + C   +C + F ++    +H RIHTG+KP   
Sbjct: 10  ERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GE+   C  CG+ F ++    +H ++H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 TG+KP +C  C ++F     L  H RTH  +K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+P  C    C + F    +L  H R H   K    
Sbjct: 10  EKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + TGEKP  C  CG+ F    +   H + H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 G  P++C  C +SFS    L  H R HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
             PY C    C++ FS    L  H R+HT +KP   
Sbjct: 10  VNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 7/34 (20%), Positives = 14/34 (41%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  G  P+ C  C + F+       H ++H
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 64.0 bits (155), Expect = 2e-13
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           Y C  E C  R  +   L +HIR HT  +P+ C  C  SF    +LT H+++    K
Sbjct: 2   YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 15/51 (29%), Positives = 20/51 (39%)

Query: 346 FQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           + C  C     +   L  HIRTHT  +P+ C  C   F       +H K  
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 +  K  QC  C R F+   HL  H R HTGEKP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            + + C    C R F+    L +H RIHTG+KP   
Sbjct: 10  TKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   + +  K   C  CGR F       +H ++H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSC 376
                TG+KP++C  C ++F ++  L  H R  HTGEKP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQC 348
           ++PY C    C + F ++  L RH R  HTG+KP   
Sbjct: 10  KKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRH 392
           +   + TG+KP+ C  CG+ F ++    RH
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                 G+K ++CR C   FS++  L  H   H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 9e-08
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+ + C    CD  FS++  L  H  +H G+KP   
Sbjct: 10  EKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GEK + C  C   F+++   + H  VH
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
                T  K + C  C ++F+R  HLT H + HT +   S 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.9 bits (107), Expect = 7e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + T  K ++C+ CG+ F R     RH K+H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
            + Y C    C + F+R   LTRH +IHT +     
Sbjct: 10  SKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 61.7 bits (149), Expect = 5e-12
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 1/109 (0%)

Query: 328 SRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSD 387
           S       +  I TG   F+C+ C  ++     LT H+   TG              +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRW 60

Query: 388 EKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHH 436
            K R   +   +  +   K+   M    + +  Q   VH  +  H+   
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.3 bits (135), Expect = 4e-10
 Identities = 15/85 (17%), Positives = 23/85 (27%), Gaps = 7/85 (8%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRI-----HTGQKPFQCRICMRSFSRSDHLTTHIRT 367
              + C  ++C   +    ELT H+           +         S  R   L      
Sbjct: 17  ASKFRC--KDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74

Query: 368 HTGEKPFSCDVCGRKFARSDEKKRH 392
              +K   C  CG  F    +   H
Sbjct: 75  EDAQKVLKCMYCGHSFESLQDLSVH 99

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
              +GQ+ ++C+ C +SF +   LT H R HTG  P S
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 346
           +R Y C  + C + F +   LT H RIHTG  P 
Sbjct: 8   QRVYEC--QECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 7/31 (22%), Positives = 15/31 (48%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +G++ + C  CG+ F +      H ++H
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
                +G+K   C  C ++F     L  H R H GEK     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              + +GEK  +CD CG+ F      + H +VH
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+ + C  + C + F     L  H R+H G+K    
Sbjct: 10  EKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 57.3 bits (139), Expect = 2e-11
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           + F C +C R+F+R +HL  H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           R + C V  C R F+R + L RH R HT +K
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR 400
           + F C+VC R FAR +  KRH + H  ++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 307 SKTPVHERPYACPVENCDRRFSRSDE--LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH 364
             TP  +R     V+         DE      +        F C +C+  FS S  L  H
Sbjct: 34  QLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH 93

Query: 365 IRTHTGEKPFSCDVCGRKFARSDEKKRHA-KVHLKQRS 401
           IR    E    C VC ++F  +D    H  K H    S
Sbjct: 94  IRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNICVS 129

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 56.1 bits (136), Expect = 7e-11
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 375
                 G+ P+ C  C +SF++   L  H R+ +   P S
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 41.5 bits (98), Expect = 8e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 346
           E PY C    C + F++   L  H R  +   P 
Sbjct: 9   ETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +  GE P+ C  CG+ F +      H +  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 55.7 bits (134), Expect = 1e-10
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC 379
                +K   C IC + F    HL  H  +H+GEKP+S    
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC 351
            +  AC  E C + F     L RH   H+G+KP+     
Sbjct: 10  RKQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC 376
              +G+KP+ C  C  +FS ++ L  H + HT +   S 
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
              +GEKP+SC  C   F+ ++   +H K+H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           E+PY+C    C   FS ++ L +H ++HT +     
Sbjct: 8   EKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 7/77 (9%)

Query: 329 RSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDE 388
            S    +  +IH G +  +C  C   F           T +  K   C+ C +   +   
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAA 54

Query: 389 KKRHAKVHLKQRSKKES 405
             +       +++   S
Sbjct: 55  LNKDEGNESGKKTSGPS 71

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 9/62 (14%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           +R   C    C   F R   L+R        K   C  C +   +   L       +G+K
Sbjct: 16  DRSQKC--SKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEGNESGKK 66

Query: 373 PF 374
             
Sbjct: 67  TS 68

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKP 373
                  G+ PF+C  C R F++ ++L  H RTH  +  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (91), Expect = 8e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           +   +  GE PF C  C R F + +   +H + H
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKP 345
           E P+ C    CDR F++ + L +H R H  +  
Sbjct: 10  ENPFKC--SKCDRVFTQRNYLVQHERTHARKSG 40

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 6/95 (6%)

Query: 303 PNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLT 362
            +  +    ++  Y C +  C+ + S   E   H R+   +    C  C   F   +   
Sbjct: 4   GSSGASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQ 59

Query: 363 THIRTHTGEKPFSCDVCGRKFARSDEKKRH-AKVH 396
            H  +    K  +C  C R F  S    RH  +VH
Sbjct: 60  EH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 8/32 (25%), Positives = 20/32 (62%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           ++ + C ++ C + + ++  L  H+R HTG++
Sbjct: 6   KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 44.3 bits (105), Expect = 8e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 341 TGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEK 372
             +K   C I  C + + ++ HL  H+R HTGE+
Sbjct: 4   GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 43.5 bits (102), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHT 341
           +RPY+C    CD+ F R+ +L RH + H 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 371 EKPFSCDV--CGRKFARSDEKKRHAKVHLKQ 399
           ++P+SCD   C + F R+ +  RH K H ++
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 346 FQCRICMRSFSRSDHLTTHIRTHTGEK 372
           F C  C + F RSDHLT HI  H  +K
Sbjct: 3   FACPECPKRFMRSDHLTLHILLHENKK 29

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQK 344
           +ACP   C +RF RSD LT HI +H  +K
Sbjct: 3   FACPE--CPKRFMRSDHLTLHILLHENKK 29

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 36.4 bits (84), Expect = 6e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 374 FSCDVCGRKFARSDEKKRHAKVHLKQR 400
           F+C  C ++F RSD    H  +H  ++
Sbjct: 3   FACPECPKRFMRSDHLTLHILLHENKK 29

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 42.6 bits (100), Expect = 3e-06
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 346 FQCRICMRSFSRSDHLTTHIRTHTGEKP 373
           F C  C + F RSDHL+ HI  H     
Sbjct: 3   FACPECPKRFMRSDHLSKHITLHELLGE 30

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKP 345
           +ACP   C +RF RSD L++HI +H     
Sbjct: 3   FACPE--CPKRFMRSDHLSKHITLHELLGE 30

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 39.1 bits (91), Expect = 6e-05
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 374 FSCDVCGRKFARSDEKKRHAKVHLKQRSKKE 404
           F+C  C ++F RSD   +H  +H     ++ 
Sbjct: 3   FACPECPKRFMRSDHLSKHITLHELLGEERR 33

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 30

 Score = 39.1 bits (91), Expect = 7e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 372 KPFSCDVCGRKFARSDEKKRHA-KVH 396
           K ++C +C R F R D   RHA K+H
Sbjct: 1   KAYACGLCNRAFTRRDLLIRHAQKIH 26

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 30

 Score = 36.0 bits (83), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRT-HTG 370
           K + C +C R+F+R D L  H +  H+G
Sbjct: 1   KAYACGLCNRAFTRRDLLIRHAQKIHSG 28

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
            + ++ + C    C + F R   +  HI+ H   +
Sbjct: 13  EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 65/483 (13%), Positives = 132/483 (27%), Gaps = 145/483 (30%)

Query: 69  EEEEETSLSST----ISMYPGSNPSHSDKISYRGIFTTTNSSPSHQP----GAASSPGNN 120
           ++  ++ LS      I M        +   + R +F T  S                   
Sbjct: 39  QDMPKSILSKEEIDHIIMSK-----DAVSGTLR-LFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 121 WMLTG-----TDKSLFPPLFISSGVLGQSNNSNQ--GPYSGSSPSHYDE--------RSQ 165
           ++++         S+   ++I      +  N NQ    Y+ S    Y +        R  
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQ--RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 166 Q----HEML-------------NINIECGALKQPSSSY----SSCSGEQDVYARVNQSLM 204
           +      +L             +  ++C   K     +     +C+  + V   + + L 
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQC---KMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 205 HSPNNKYQWLDSPVEYSASIVQAQPGI--IPKQEPVYGNT----------------NLSG 246
               N     D        I   Q  +  + K +P Y N                 NL  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YENCLLVLLNVQNAKAWNAFNL-S 265

Query: 247 CGSLV-----NLSDPNNPGSSYPVQLAEYNP--STSKGHEILS------------QVYQQ 287
           C  L+      ++D  +  ++  + L  ++   +  +   +L             +V   
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 288 SPLPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDR-RFSRSDELTRHIRIH-TGQKP 345
           +P  L ++    R                       D  +    D+LT  I       +P
Sbjct: 326 NPRRLSIIAESIRDGLATW-----------------DNWKHVNCDKLTTIIESSLNVLEP 368

Query: 346 FQCRICMRSFS--RSDHLTTHIRTHT-----GEKPFSCDVCGRKFARSDEKK----RHAK 394
            + R      S         HI T        +   S             K     +  K
Sbjct: 369 AEYRKMFDRLSVFPPS---AHIPTILLSLIWFDVIKSDV---MVVVNKLHKYSLVEKQPK 422

Query: 395 --------VHLKQRSKKESKMAV---MMSQQQAQQQQQQNHVHQQQQ----HHHHHHHHP 439
                   ++L+ + K E++ A+   ++      +    + +         + H  HH  
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 440 NME 442
           N+E
Sbjct: 483 NIE 485

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 10/123 (8%)

Query: 256 PNNPGSSYPVQLAEYNPSTSKGHEILSQVYQQSPLPLKLVPVKPRKYPNRPSKTPVH--- 312
           P+  G++    + E++ +  +  E   +  + +      V        N    +      
Sbjct: 81  PDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVD 140

Query: 313 -------ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI 365
                  +       E      S+           +    +QC +C         L  H+
Sbjct: 141 NEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHV 200

Query: 366 RTH 368
            +H
Sbjct: 201 ASH 203

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 370
            +G+KP+ C +C   F R D ++ H+R+H G
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens} Length = 29

 Score = 36.3 bits (83), Expect = 5e-04
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           KP QC +C ++F+++  L  H+R HTGEK
Sbjct: 1   KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK 389
           S   + H       +   C+ C    S    L  H   + G +   C  CGR     D  
Sbjct: 2   SSGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKD-L 58

Query: 390 KRHAKVHLKQRSKKES 405
           K H +V  ++ S   S
Sbjct: 59  KTHPEVCGREGSGPSS 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	451
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.71
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.7
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.68
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.68
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.67
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.67
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.67
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.52
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.51
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.49
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.47
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.45
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.45
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.44
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.44
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.43
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.42
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.42
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.42
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.41
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.38
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.37
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.37
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.37
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.36
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.35
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.3
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.3
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.28
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.28
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.24
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.24
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.24
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.22
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.21
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.2
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.19
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.01
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.94
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.94
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.93
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.93
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.92
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.92
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.91
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.91
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.91
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.89
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.89
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.87
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.84
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.83
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.8
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.79
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.76
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.74
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.73
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.72
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.55
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.54
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.46
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.43
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.41
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.41
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.4
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.39
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.35
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.33
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.32
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.3
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.29
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.28
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.26
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.19
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.11
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.07
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.06
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.01
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.01
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.99
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.96
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.96
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.95
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.92
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.91
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.88
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.87
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.82
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.82
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.82
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.81
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.8
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.98
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.98
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.76
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.76
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.93
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.72
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.68
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.68
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.66
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.66
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.62
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.58
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.57
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.5
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.61
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.14
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.02
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.56
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.52
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.9
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.8
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.1
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	86.57

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=5.8e-21  Score=160.53  Aligned_cols=112  Identities=38%  Similarity=0.745  Sum_probs=106.2

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCCCCccCChHH
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDE  388 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~  388 (451)
                      .++++|.|.+++|++.|.....|.+|++.|.++++|.|.  .|++.|.....|.+|+++|+++++|.|.+|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            467899997667999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCcccchH--HHHHHHHHHHHHHHHHHH
Q psy677          389 KKRHAKVHLKQRSKKE--SKMAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       389 Lk~HlrtH~~er~~k~--~~~~~~~~qqq~qqqhQq  422 (451)
                      |.+|+++|+++++|+|  ..|+..|.....+.+|++
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            9999999999999999  899999999999988875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.81  E-value=7.2e-21  Score=167.90  Aligned_cols=101  Identities=28%  Similarity=0.479  Sum_probs=92.3

Q ss_pred             CCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCCh
Q psy677          307 SKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS  386 (451)
Q Consensus       307 skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~  386 (451)
                      ...+.|+++|.|.+  |++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|+|+++|.|++|++.|.+.
T Consensus        14 ~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           14 ELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             eeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            35577899999955  9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCccc------chHHHHHH
Q psy677          387 DEKKRHAKVHLKQRS------KKESKMAV  409 (451)
Q Consensus       387 s~Lk~HlrtH~~er~------~k~~~~~~  409 (451)
                      ..|..|+++|+++++      |+|..|..
T Consensus        92 ~~L~~H~~~hh~~~p~~~~k~~~C~~C~k  120 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGDSKLYRLHPCRS  120 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSSSCCEEECCCCS
T ss_pred             HHHHHHhHHhcCCCCCCCCCCeecCCCCc
Confidence            999999999987654      66666543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.7e-20  Score=149.21  Aligned_cols=89  Identities=85%  Similarity=1.505  Sum_probs=82.7

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKR  391 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~  391 (451)
                      ++++|.|.++.|++.|.....|.+|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.+...|.+
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            36789997667999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCcc
Q psy677          392 HAKVHLKQR  400 (451)
Q Consensus       392 HlrtH~~er  400 (451)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=2.2e-19  Score=148.65  Aligned_cols=92  Identities=36%  Similarity=0.794  Sum_probs=87.3

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHH
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK  389 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~L  389 (451)
                      ...+++|.|.+  |++.|.....|.+|++.|.++++|.|.+|++.|.....|.+|+++|+++++|+|.+|++.|.+...|
T Consensus        12 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           12 SKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHH
T ss_pred             cCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHH
Confidence            34578899955  9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCcccch
Q psy677          390 KRHAKVHLKQRSKK  403 (451)
Q Consensus       390 k~HlrtH~~er~~k  403 (451)
                      .+|+++|++++++.
T Consensus        90 ~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           90 AVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHHTTSCCCCC
T ss_pred             HHHHHHhCCCCCCc
Confidence            99999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=9.9e-20  Score=153.73  Aligned_cols=112  Identities=29%  Similarity=0.502  Sum_probs=105.3

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhc---ccCCCceecCCCCCccCChH
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRT---HTGEKPFSCDVCGRKFARSD  387 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rt---HtGeKPfkC~~CgK~Fs~~s  387 (451)
                      .++++|.|..  |++.|.....|.+|++.|.++++|.|..|++.|.....|.+|++.   |.++++|.|.+|++.|....
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH
Confidence            4678899954  999999999999999999999999999999999999999999985   67899999999999999999


Q ss_pred             HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Q psy677          388 EKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNH  424 (451)
Q Consensus       388 ~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQqn~  424 (451)
                      .|.+|+++|+++++|+|..|...|.....+++|.+..
T Consensus        81 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  117 (124)
T 2dlq_A           81 ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL  117 (124)
T ss_dssp             HHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999998753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=2.1e-21  Score=177.31  Aligned_cols=113  Identities=40%  Similarity=0.792  Sum_probs=74.2

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChH
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSD  387 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s  387 (451)
                      ..|.++++|.|.+  |++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|+|.+|++.|....
T Consensus        70 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A           70 RTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED  147 (190)
T ss_dssp             HHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             HhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHH
Confidence            3444556666633  66666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHH
Q psy677          388 EKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       388 ~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQq  422 (451)
                      .|..|+++|+++++|+|..|+..|.....+..|.+
T Consensus       148 ~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          148 NLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             HHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            66666666666666666666666666666666654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.9e-19  Score=145.16  Aligned_cols=91  Identities=34%  Similarity=0.711  Sum_probs=85.9

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHH
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEK  389 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~L  389 (451)
                      +.++++|.|.+  |++.|.....|.+|++.|.++++|.|..|++.|.....|.+|+++|+++++|+|.+|++.|.....|
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHH
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHH
Confidence            45678999955  9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCcccc
Q psy677          390 KRHAKVHLKQRSK  402 (451)
Q Consensus       390 k~HlrtH~~er~~  402 (451)
                      .+|+++|++++..
T Consensus        81 ~~H~~~h~~~~~p   93 (96)
T 2dmd_A           81 TVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHTTCCSCCCC
T ss_pred             HHHHHHhcCCCCC
Confidence            9999999988753

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.77  E-value=5.6e-20  Score=167.81  Aligned_cols=120  Identities=37%  Similarity=0.760  Sum_probs=109.2

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCcc
Q psy677          304 NRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKF  383 (451)
Q Consensus       304 ~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~F  383 (451)
                      ..+.+.|.++++|.|..  |++.|.....|.+|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|
T Consensus        38 ~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (190)
T 2i13_A           38 AEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF  115 (190)
T ss_dssp             HHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred             HHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCcc
Confidence            34456677889999955  9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHh
Q psy677          384 ARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHV  425 (451)
Q Consensus       384 s~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQqn~~  425 (451)
                      .....|..|+++|+++++|+|..|+..|.....+..|++...
T Consensus       116 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  157 (190)
T 2i13_A          116 SQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT  157 (190)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999987643

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.76  E-value=1.8e-19  Score=153.04  Aligned_cols=112  Identities=28%  Similarity=0.599  Sum_probs=99.9

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC--CCCccCChHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEK  389 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~~s~L  389 (451)
                      .+++|.|.+..|++.|.+...|.+|++.| ++++|.|..|++.|.....|.+|+++|+++++|.|.+  |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789997557999999999999999999 8899999999999999999999999999999999976  99999999999


Q ss_pred             HHHHHHHhCcccchH--HHHHHHHHHHHHHHHHHHHH
Q psy677          390 KRHAKVHLKQRSKKE--SKMAVMMSQQQAQQQQQQNH  424 (451)
Q Consensus       390 k~HlrtH~~er~~k~--~~~~~~~~qqq~qqqhQqn~  424 (451)
                      .+|+++|+++++|+|  ..|+..|.....+..|++..
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            999999999999999  46999888888888887653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.8e-18  Score=144.27  Aligned_cols=89  Identities=30%  Similarity=0.790  Sum_probs=84.8

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChH
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSD  387 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s  387 (451)
                      ..|.++++|.| .  |++.|.....|.+|++.|.++++|.|.+|++.|.....|.+|+++|+++++|+|.+|++.|.+..
T Consensus         3 ~~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            3 SGSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHH
T ss_pred             CCCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHH
Confidence            45788999999 6  99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCc
Q psy677          388 EKKRHAKVHLKQ  399 (451)
Q Consensus       388 ~Lk~HlrtH~~e  399 (451)
                      .|.+|+++|++.
T Consensus        80 ~l~~H~~~~~~~   91 (110)
T 2csh_A           80 SFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHcccc
Confidence            999999998753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.75  E-value=2.7e-18  Score=140.13  Aligned_cols=89  Identities=44%  Similarity=0.828  Sum_probs=83.5

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCCCCccCChH
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSD  387 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s  387 (451)
                      ...+++|.|.+..|++.|.....|.+|++.|.++++|.|.  .|++.|.....|.+|+++|+++++|+|.+|++.|.+..
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            3456789998778999999999999999999999999996  69999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhC
Q psy677          388 EKKRHAKVHLK  398 (451)
Q Consensus       388 ~Lk~HlrtH~~  398 (451)
                      .|.+|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999974

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=1e-18  Score=137.32  Aligned_cols=82  Identities=34%  Similarity=0.850  Sum_probs=78.4

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHH
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK  394 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hlr  394 (451)
                      +|.|.+  |++.|.....|..|++.|.++++|.|..|++.|.....|.+|+++|+++++|.|..|++.|.+...|.+|++
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            588955  999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhC
Q psy677          395 VHLK  398 (451)
Q Consensus       395 tH~~  398 (451)
                      +|++
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9974

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.2e-18  Score=145.18  Aligned_cols=93  Identities=23%  Similarity=0.360  Sum_probs=86.4

Q ss_pred             CCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCCh
Q psy677          307 SKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS  386 (451)
Q Consensus       307 skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~  386 (451)
                      .+.+.++++|.|.+  |++.|.....|.+|+++|  .++|.|.+|++.|.....|.+|++ |+++++|+|.+|++.|.+.
T Consensus         8 ~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            8 ASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             CcccCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            45678899999955  999999999999999999  479999999999999999999996 9999999999999999999


Q ss_pred             HHHHHHHH-HHhCcccchH
Q psy677          387 DEKKRHAK-VHLKQRSKKE  404 (451)
Q Consensus       387 s~Lk~Hlr-tH~~er~~k~  404 (451)
                      ..|.+|++ +|.++++|.+
T Consensus        83 ~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCC
Confidence            99999997 9999988865

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=7.9e-18  Score=141.47  Aligned_cols=98  Identities=15%  Similarity=0.236  Sum_probs=88.2

Q ss_pred             CCCCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHH--hcCCCCcc-Cccccccc--CCcchhhhhhhcccCCCceec
Q psy677          302 YPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI--HTGQKPFQ-CRICMRSF--SRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       302 ~p~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~--HtgeKPf~-C~~C~K~F--~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      ....+.+.|.++++|.|.  .|++.|.....|.+|++.  |.+.+++. |..|++.|  .....|.+|+++|+++++|+|
T Consensus         6 ~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            345667789999999995  599999999999999999  77777655 99999999  999999999999999999999


Q ss_pred             CCCCCccCChHHHHHHHHHHhCccc
Q psy677          377 DVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       377 ~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      .+|++.|.+...|.+|+++|+....
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCccc
Confidence            9999999999999999999876543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.3e-18  Score=137.93  Aligned_cols=88  Identities=36%  Similarity=0.795  Sum_probs=82.1

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCC--CceecCCCCCccCChHH
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE--KPFSCDVCGRKFARSDE  388 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe--KPfkC~~CgK~Fs~~s~  388 (451)
                      .++++|.|.+  |++.|.....|.+|++.|.++++|.|..|++.|.....|.+|+++|+++  ++|+|.+|++.|.+...
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            4678999955  9999999999999999999999999999999999999999999999997  99999999999999999


Q ss_pred             HHHHHH-HHhCcc
Q psy677          389 KKRHAK-VHLKQR  400 (451)
Q Consensus       389 Lk~Hlr-tH~~er  400 (451)
                      |.+|++ +|.++.
T Consensus        81 L~~H~~~~H~~~~   93 (95)
T 2yt9_A           81 LNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHTSCCCS
T ss_pred             HHHHHHHhcCCCC
Confidence            999996 787653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.3e-18  Score=151.31  Aligned_cols=115  Identities=27%  Similarity=0.591  Sum_probs=103.3

Q ss_pred             CCCCCCCccCCC---CCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecCC--CCC
Q psy677          309 TPVHERPYACPV---ENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGR  381 (451)
Q Consensus       309 t~~~eKpy~C~~---e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK  381 (451)
                      .+.++++|.|.+   ..|++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+  |++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  107 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK  107 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCC
Confidence            466778899864   334599999999999999999999999985  9999999999999999999999999998  999


Q ss_pred             ccCChHHHHHHH-HHHhCcccchHHH--HHHHHHHHHHHHHHHHH
Q psy677          382 KFARSDEKKRHA-KVHLKQRSKKESK--MAVMMSQQQAQQQQQQN  423 (451)
Q Consensus       382 ~Fs~~s~Lk~Hl-rtH~~er~~k~~~--~~~~~~qqq~qqqhQqn  423 (451)
                      .|.+...|.+|+ ++|.++++|+|..  |+..|.....+..|++.
T Consensus       108 ~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A          108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             EESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence            999999999998 8999999999988  99999999999988764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=5e-18  Score=142.50  Aligned_cols=91  Identities=64%  Similarity=1.140  Sum_probs=84.5

Q ss_pred             CCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec--CCCCCcc
Q psy677          306 PSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC--DVCGRKF  383 (451)
Q Consensus       306 ~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC--~~CgK~F  383 (451)
                      +.+.|.++++|.|.+..|++.|.+...|.+|++.|.++++|.|..|++.|.....|.+|+++|+++++|+|  +.|++.|
T Consensus        27 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  106 (119)
T 2jp9_A           27 HSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF  106 (119)
T ss_dssp             HHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEE
T ss_pred             HHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcccc
Confidence            33456678899997547999999999999999999999999999999999999999999999999999999  8999999


Q ss_pred             CChHHHHHHHHHH
Q psy677          384 ARSDEKKRHAKVH  396 (451)
Q Consensus       384 s~~s~Lk~HlrtH  396 (451)
                      .+...|.+|+++|
T Consensus       107 ~~~~~L~~H~~~H  119 (119)
T 2jp9_A          107 ARSDELVRHHNMH  119 (119)
T ss_dssp             SSHHHHHHHHHTC
T ss_pred             CCHHHHHHHHhcC
Confidence            9999999999987

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=6.6e-18  Score=134.96  Aligned_cols=85  Identities=42%  Similarity=0.878  Sum_probs=80.5

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHH
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKK  390 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk  390 (451)
                      .+.|.|.+.+|++.|.....|.+|++.|.++++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            4679997777999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHHHh
Q psy677          391 RHAKVHL  397 (451)
Q Consensus       391 ~HlrtH~  397 (451)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999884

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.70  E-value=3.5e-18  Score=150.69  Aligned_cols=87  Identities=46%  Similarity=0.925  Sum_probs=61.6

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecCC--CCCccCChHHHHH
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKR  391 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~~s~Lk~  391 (451)
                      |.|.+  |++.|.....|.+|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|+|.+  |++.|.+...|.+
T Consensus        63 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHH
Confidence            56633  7777777777777777777777777766  7777777777777777777777777775  7777777777777


Q ss_pred             HHHHHhCcccchH
Q psy677          392 HAKVHLKQRSKKE  404 (451)
Q Consensus       392 HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|
T Consensus       141 H~~~H~~~k~~~c  153 (155)
T 2rpc_A          141 HMHVHTSDKSGPS  153 (155)
T ss_dssp             SSTTTTSCCCSCS
T ss_pred             HHHHhcCCCCCCC
Confidence            7777777776665

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.68  E-value=9e-19  Score=159.77  Aligned_cols=113  Identities=27%  Similarity=0.532  Sum_probs=60.0

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc--ccccccCCcchhhhhh-hcc-cCCCceec--CCCCCcc
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRSFSRSDHLTTHI-RTH-TGEKPFSC--DVCGRKF  383 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~-rtH-tGeKPfkC--~~CgK~F  383 (451)
                      |.++++|.|.+..|++.|.....|.+|+++|.++++|.|.  .|++.|.....|.+|+ +.| .++++|.|  ..|++.|
T Consensus        37 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f  116 (190)
T 1tf6_A           37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF  116 (190)
T ss_dssp             HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEEC
T ss_pred             cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcccc
Confidence            3444555552223555555555555555555555555555  4555555555555555 344 24455555  5555555


Q ss_pred             CChHHHHHHHHHHhCcccchHHH--HHHHHHHHHHHHHHHH
Q psy677          384 ARSDEKKRHAKVHLKQRSKKESK--MAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       384 s~~s~Lk~HlrtH~~er~~k~~~--~~~~~~qqq~qqqhQq  422 (451)
                      .....|..|+++|+++++|+|..  |+..|.....+..|++
T Consensus       117 ~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~  157 (190)
T 1tf6_A          117 KKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK  157 (190)
T ss_dssp             SSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH
Confidence            55555555555555555555544  5555555555555543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.68  E-value=1.5e-17  Score=141.08  Aligned_cols=92  Identities=41%  Similarity=0.797  Sum_probs=81.5

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecC--CCCCcc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKF  383 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~--~CgK~F  383 (451)
                      +.| ++++|.|.+  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|.  .|++.|
T Consensus        28 ~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  104 (124)
T 1ubd_C           28 HTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF  104 (124)
T ss_dssp             GGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCC
T ss_pred             HHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCcc
Confidence            344 678899955  9999999999999999999999999986  999999999999999999999999995  599999


Q ss_pred             CChHHHHHHHHHHhCcccc
Q psy677          384 ARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       384 s~~s~Lk~HlrtH~~er~~  402 (451)
                      .+...|.+|+++|++++++
T Consensus       105 ~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          105 AQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             SSTTTTHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHcccccC
Confidence            9999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.67  E-value=1.5e-17  Score=146.54  Aligned_cols=111  Identities=32%  Similarity=0.537  Sum_probs=101.7

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHH-hcCCCC--------ccCcccccccCCcchhhhhhhcccCCCceecCC--
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRI-HTGQKP--------FQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV--  378 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~-HtgeKP--------f~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--  378 (451)
                      ...++.|.|.  .|++.|.+...|.+|++. |.+.++        |.|..|++.|.....|.+|+++|+++++|.|.+  
T Consensus        20 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             chhhcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            3456678994  599999999999999998 777655        899999999999999999999999999999998  


Q ss_pred             CCCccCChHHHHHHHHHHhCcccchHHH--HHHHHHHHHHHHHHHH
Q psy677          379 CGRKFARSDEKKRHAKVHLKQRSKKESK--MAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       379 CgK~Fs~~s~Lk~HlrtH~~er~~k~~~--~~~~~~qqq~qqqhQq  422 (451)
                      |++.|.+...|.+|+++|+++++|+|..  |+..|.....+.+|++
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            9999999999999999999999999996  9999999999988865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=8.2e-18  Score=141.89  Aligned_cols=94  Identities=27%  Similarity=0.675  Sum_probs=84.3

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHH---hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCC
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRI---HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGR  381 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~---HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK  381 (451)
                      .+.+.|.++++|.|.+  |++.|.+...|.+|++.   |.++++|.|.+|++.|.....|.+|+++|+++++|+|.+|++
T Consensus        25 ~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  102 (124)
T 2dlq_A           25 VHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ  102 (124)
T ss_dssp             HHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred             HHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccc
Confidence            3445567788999955  99999999999999996   578899999999999999999999999999999999999999


Q ss_pred             ccCChHHHHHHHH-HHhCcc
Q psy677          382 KFARSDEKKRHAK-VHLKQR  400 (451)
Q Consensus       382 ~Fs~~s~Lk~Hlr-tH~~er  400 (451)
                      .|.+...|.+|++ .|.+++
T Consensus       103 ~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A          103 QFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             EESSHHHHHHHHHHTSSCSS
T ss_pred             hhCCHHHHHHHHHHHCCCCC
Confidence            9999999999997 466553

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.67  E-value=2.3e-17  Score=150.40  Aligned_cols=114  Identities=32%  Similarity=0.610  Sum_probs=104.1

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccC--cccccccCCcchhhhhhhcccCCCceecC--CCCCccCC
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKFAR  385 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C--~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~--~CgK~Fs~  385 (451)
                      +...++|.|.+..|++.|.....|..|++.|.++++|.|  ..|++.|.....|.+|+++|+++++|.|.  .|++.|..
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            455788999766799999999999999999999999999  88999999999999999999999999999  89999999


Q ss_pred             hHHHHHHH-HHH-hCcccchH--HHHHHHHHHHHHHHHHHHH
Q psy677          386 SDEKKRHA-KVH-LKQRSKKE--SKMAVMMSQQQAQQQQQQN  423 (451)
Q Consensus       386 ~s~Lk~Hl-rtH-~~er~~k~--~~~~~~~~qqq~qqqhQqn  423 (451)
                      ...|.+|+ +.| .++++|.|  ..|+..|.....+..|++.
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  128 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS  128 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence            99999999 667 47889999  9999999999999999764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.6e-17  Score=141.59  Aligned_cols=94  Identities=32%  Similarity=0.752  Sum_probs=87.2

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhh-hcccCCCceecCC--C
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHI-RTHTGEKPFSCDV--C  379 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~-rtHtGeKPfkC~~--C  379 (451)
                      .+.+.|.++++|.|.++.|++.|.+...|.+|+++|+++++|.|.+  |++.|.....|.+|+ ++|.++++|+|.+  |
T Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C  136 (155)
T 2gli_A           57 VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGC  136 (155)
T ss_dssp             HHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTT
T ss_pred             HHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCC
Confidence            3445677889999976679999999999999999999999999998  999999999999999 8999999999998  9


Q ss_pred             CCccCChHHHHHHHHHHhC
Q psy677          380 GRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       380 gK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ++.|.+...|.+|+++|++
T Consensus       137 ~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          137 TKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEESSHHHHHHHHHHSCC
T ss_pred             ccccCCHHHHHHHHHhhcC
Confidence            9999999999999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=8.9e-17  Score=126.02  Aligned_cols=74  Identities=28%  Similarity=0.596  Sum_probs=70.4

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHH-HhcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecCCCCCccC
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFA  384 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r-~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs  384 (451)
                      .++++|.|.++.|++.|.+...|.+|++ .|.++++|.|..  |++.|.....|.+|+++|+++++|+|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4678999988889999999999999999 799999999999  9999999999999999999999999999999995

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=1.4e-16  Score=125.59  Aligned_cols=80  Identities=29%  Similarity=0.564  Sum_probs=75.8

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecCC---CCCccCChHHH
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDV---CGRKFARSDEK  389 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~~---CgK~Fs~~s~L  389 (451)
                      ||.|.|+.|++.|.....|..|+++|.++++|.|..  |++.|.....|.+|+++|++   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            588966669999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHHHh
Q psy677          390 KRHAKVHL  397 (451)
Q Consensus       390 k~HlrtH~  397 (451)
                      .+|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999885

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=5.6e-17  Score=124.72  Aligned_cols=57  Identities=37%  Similarity=0.804  Sum_probs=36.0

Q ss_pred             CCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      ||||.|..|++.|.....|.+|+++|+|+|||.|.+|++.|.+...|.+|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=4.9e-17  Score=130.94  Aligned_cols=83  Identities=39%  Similarity=0.660  Sum_probs=75.1

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHH
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH  392 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~H  392 (451)
                      +++|.|.+  |++.|.....|.+|+++|.++++|.|..|++.|.....|.+|+++|++ ++|.|..|++.|.....|..|
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHH
Confidence            47899954  999999999999999999999999999999999999999999999885 889999999999999999999


Q ss_pred             HHHHhC
Q psy677          393 AKVHLK  398 (451)
Q Consensus       393 lrtH~~  398 (451)
                      ++.+++
T Consensus        78 ~~~~h~   83 (88)
T 1llm_C           78 VARLKK   83 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            977654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.60  E-value=3.1e-17  Score=144.58  Aligned_cols=91  Identities=20%  Similarity=0.324  Sum_probs=86.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHH
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQ  414 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qq  414 (451)
                      .|.++|.|+++|.|.+|++.|.....|.+|+++|+++++|+|++|++.|.+...|..|+++|++++++.|..|+..|...
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q psy677          415 QAQQQQQQNHV  425 (451)
Q Consensus       415 q~qqqhQqn~~  425 (451)
                      ..+..|++...
T Consensus        92 ~~L~~H~~~hh  102 (133)
T 2lt7_A           92 QFMSSHIKSVH  102 (133)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHhHHhc
Confidence            99999988764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.7e-16  Score=131.24  Aligned_cols=80  Identities=11%  Similarity=0.194  Sum_probs=71.7

Q ss_pred             CCccCChHHHHHHHHHhcCCCCccCcccccccC-CcchhhhhhhcccC-CCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          324 DRRFSRSDELTRHIRIHTGQKPFQCRICMRSFS-RSDHLTTHIRTHTG-EKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       324 gk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~-~~s~Lk~H~rtHtG-eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      ...+.....+.+|+++|.++++|.|.+|++.|. ....|.+|+++|++ +++|+|.+|++.|.+...|.+|+++|+++++
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            344556667788999999999999999999999 99999999999998 9999999999999999999999999999887


Q ss_pred             ch
Q psy677          402 KK  403 (451)
Q Consensus       402 ~k  403 (451)
                      ..
T Consensus        83 ~~   84 (98)
T 2gqj_A           83 SD   84 (98)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=1.6e-15  Score=116.58  Aligned_cols=58  Identities=29%  Similarity=0.731  Sum_probs=55.1

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      ||||.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|+|++
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7999995  499999999999999999999999999999999999999999999999975

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=9.7e-15  Score=114.55  Aligned_cols=68  Identities=40%  Similarity=0.775  Sum_probs=60.2

Q ss_pred             CCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          307 SKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       307 skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      ...+.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++|++++||+|
T Consensus        10 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34556788999954  999999999999999999999999999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=7.6e-15  Score=114.31  Aligned_cols=61  Identities=36%  Similarity=0.868  Sum_probs=32.3

Q ss_pred             cCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      .++++|.|..|++.|.....|.+|+++|+++++|+|.+|++.|.+...|.+|+++|+++++
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            3444555555555555555555555555555555555555555555555555555555544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=7.4e-15  Score=122.09  Aligned_cols=77  Identities=16%  Similarity=0.261  Sum_probs=70.6

Q ss_pred             CccCChHHHHHHHHHhcCCCCccCccccccc-CCcchhhhhhhcccCCCceecCCCCCccCChHHHHHH-HHHHhCcccc
Q psy677          325 RRFSRSDELTRHIRIHTGQKPFQCRICMRSF-SRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRH-AKVHLKQRSK  402 (451)
Q Consensus       325 k~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F-~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~H-lrtH~~er~~  402 (451)
                      ..|.....|..|++.|.++++|.|..|++.| .....|+.|+++| ++++|.|.+|+|.|.+...|++| +++|+++..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            3566778899999999999999999999999 9999999999999 99999999999999999999999 8999865444

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=4.9e-15  Score=116.26  Aligned_cols=66  Identities=36%  Similarity=0.734  Sum_probs=62.9

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      .+.++++|.|.+|++.|.....|.+|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            456789999999999999999999999999999999999999999999999999999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.8e-14  Score=114.06  Aligned_cols=78  Identities=24%  Similarity=0.541  Sum_probs=68.2

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC----CCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          304 NRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ----KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       304 ~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge----KPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      .++.++|.++++|.|.+  |++.|.....|.+|++.|+..    ++|.|..|++.|.....|.+|+++|++++++.|..|
T Consensus         4 ~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             ccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            35667888899999954  999999999999999887665    789999999999999999999999999999999999


Q ss_pred             CCcc
Q psy677          380 GRKF  383 (451)
Q Consensus       380 gK~F  383 (451)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=5.6e-15  Score=114.64  Aligned_cols=64  Identities=41%  Similarity=0.829  Sum_probs=51.1

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .++|+++++|.|.+|++.|.....|.+|+++|+++++|+|.+|++.|.+...|.+|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3467777788888888888888888888888888888888888888888888888888887764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.5e-15  Score=120.46  Aligned_cols=75  Identities=27%  Similarity=0.548  Sum_probs=69.5

Q ss_pred             HHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCC----CceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE----KPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       333 L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe----KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      |.+|+++|+++++|.|..|++.|.....|.+|+++|+++    ++|+|.+|++.|.+...|.+|+++|++++.+.|..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            567999999999999999999999999999999987765    799999999999999999999999999999887654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.5e-14  Score=111.46  Aligned_cols=63  Identities=25%  Similarity=0.461  Sum_probs=50.8

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccc
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~  402 (451)
                      |.++++|.|..|++.|.....|.+|+++|+++++|+|.+|++.|.+...|.+|+++|+++++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            567778888888888888888888888888888888888888888888888888888877654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.49  E-value=3.3e-14  Score=114.28  Aligned_cols=84  Identities=57%  Similarity=0.965  Sum_probs=78.8

Q ss_pred             CCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHH
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQ  422 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQq  422 (451)
                      +++|.|..|++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|++ +++.|..|+..|.....+..|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            57999999999999999999999999999999999999999999999999999985 88999999999999999999988


Q ss_pred             HHhhh
Q psy677          423 NHVHQ  427 (451)
Q Consensus       423 n~~~~  427 (451)
                      .....
T Consensus        80 ~~h~~   84 (88)
T 1llm_C           80 RLKKL   84 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=8.2e-15  Score=118.68  Aligned_cols=84  Identities=29%  Similarity=0.552  Sum_probs=80.0

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQ  419 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqq  419 (451)
                      +.++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|.+|+++|.++++|+|..|...|.....+..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHH
Q psy677          420 QQQN  423 (451)
Q Consensus       420 hQqn  423 (451)
                      |++.
T Consensus        83 H~~~   86 (96)
T 2dmd_A           83 HLRS   86 (96)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            9754

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.8e-14  Score=116.45  Aligned_cols=84  Identities=29%  Similarity=0.525  Sum_probs=79.6

Q ss_pred             cCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCc--ccchHHHHHHHHHHHHHHH
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ--RSKKESKMAVMMSQQQAQQ  418 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e--r~~k~~~~~~~~~qqq~qq  418 (451)
                      .++++|.|..|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|+++|+++  ++|+|..|...|.....+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999997  9999999999999999999


Q ss_pred             HHHHHH
Q psy677          419 QQQQNH  424 (451)
Q Consensus       419 qhQqn~  424 (451)
                      +|.+..
T Consensus        83 ~H~~~~   88 (95)
T 2yt9_A           83 GHIKQV   88 (95)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            997653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6.6e-15  Score=122.58  Aligned_cols=89  Identities=22%  Similarity=0.458  Sum_probs=83.1

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQ  418 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qq  418 (451)
                      .|+++++|.| .|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|+++|.++++|+|..|...|.....+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5789999999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhh
Q psy677          419 QQQQNHVHQQ  428 (451)
Q Consensus       419 qhQqn~~~~~  428 (451)
                      .|++......
T Consensus        83 ~H~~~~~~~~   92 (110)
T 2csh_A           83 RHVTSCTKSY   92 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHccccc
Confidence            9887655443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=7.2e-14  Score=108.71  Aligned_cols=65  Identities=40%  Similarity=0.920  Sum_probs=60.1

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCce
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPF  374 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPf  374 (451)
                      ..+.++++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|++++||
T Consensus        10 ~~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            345678899995  49999999999999999999999999999999999999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.6e-16  Score=132.16  Aligned_cols=95  Identities=15%  Similarity=0.136  Sum_probs=87.5

Q ss_pred             HHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhc--ccCCCcee-cCCCCCcc--CChHHHHHHHHHHhCcccchHH
Q psy677          331 DELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRT--HTGEKPFS-CDVCGRKF--ARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       331 s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rt--HtGeKPfk-C~~CgK~F--s~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      ..|.+|+++|+++++|.|..|++.|.....|.+|+++  |.+++++. |.+|++.|  .....|.+|+++|.++++|+|.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4577899999999999999999999999999999999  87788765 99999999  8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q psy677          406 KMAVMMSQQQAQQQQQQNHV  425 (451)
Q Consensus       406 ~~~~~~~qqq~qqqhQqn~~  425 (451)
                      .|+..|.....+..|++...
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHhC
Confidence            99999999999999987644

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.2e-14  Score=114.01  Aligned_cols=66  Identities=30%  Similarity=0.601  Sum_probs=49.5

Q ss_pred             HHHHHHHhcCCCCccCcccccccCCcchhhhhhh-cccCC-CceecCCCCCccCChHHHHHHHHHHhC
Q psy677          333 LTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIR-THTGE-KPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       333 L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~r-tHtGe-KPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |.+|+++|+++++|.|.+|++.|.....|.+|++ .|.++ ++|+|.+|++.|.+...|.+|+++|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            3457777777777777778777877777777776 56654 778888888888888888888877554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.43  E-value=2.4e-14  Score=112.17  Aligned_cols=79  Identities=29%  Similarity=0.672  Sum_probs=76.0

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHH
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQN  423 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQqn  423 (451)
                      +|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|.+|+++|.++++|+|..|+..|.....+..|++.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            6899999999999999999999999999999999999999999999999999999999999999999999999998764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.2e-14  Score=120.83  Aligned_cols=86  Identities=15%  Similarity=0.229  Sum_probs=80.1

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHH
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQ  415 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq  415 (451)
                      +++.|+++++|.|.+|++.|.....|..|+++|  +++|.|.+|++.|.....|.+|++ |.++++|+|..|...|....
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            456788999999999999999999999999999  479999999999999999999996 99999999999999999999


Q ss_pred             HHHHHHHHH
Q psy677          416 AQQQQQQNH  424 (451)
Q Consensus       416 ~qqqhQqn~  424 (451)
                      .++.|++..
T Consensus        84 ~L~~H~~~~   92 (107)
T 1wjp_A           84 SIWRHQVEV   92 (107)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999998743

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=7.1e-14  Score=102.84  Aligned_cols=57  Identities=35%  Similarity=0.680  Sum_probs=44.3

Q ss_pred             CCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          342 GQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       342 geKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ++++|.|..|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            357788888888888888888888888888888888888888888888888888763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.42  E-value=2.2e-14  Score=118.41  Aligned_cols=84  Identities=32%  Similarity=0.627  Sum_probs=79.8

Q ss_pred             cCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHH
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQ  420 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqh  420 (451)
                      ..+++|.|..|++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++|.++++|+|..|...|.....+..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHH
Q psy677          421 QQNH  424 (451)
Q Consensus       421 Qqn~  424 (451)
                      ++..
T Consensus        93 ~~~H   96 (106)
T 2ee8_A           93 KTLH   96 (106)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=7.4e-14  Score=119.58  Aligned_cols=82  Identities=24%  Similarity=0.426  Sum_probs=71.4

Q ss_pred             CCCccCCCCCCCCcc------CChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCCh
Q psy677          313 ERPYACPVENCDRRF------SRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARS  386 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F------~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~  386 (451)
                      ++.+.|.+  |.+.|      .....|..|+ .|+++++|.|..|++.|.....|.+|+++|  +++|.|.+|++.|.+.
T Consensus        39 ~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~  113 (129)
T 2wbt_A           39 QKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST  113 (129)
T ss_dssp             HHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSH
T ss_pred             hCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCH
Confidence            45577744  66555      4677777777 688899999999999999999999999999  8999999999999999


Q ss_pred             HHHHHHHHHHhCc
Q psy677          387 DEKKRHAKVHLKQ  399 (451)
Q Consensus       387 s~Lk~HlrtH~~e  399 (451)
                      ..|.+|+++|++.
T Consensus       114 ~~l~~H~~~h~~~  126 (129)
T 2wbt_A          114 DSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHCCc
Confidence            9999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.42  E-value=2.5e-14  Score=114.22  Aligned_cols=82  Identities=33%  Similarity=0.662  Sum_probs=76.8

Q ss_pred             CCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Q psy677          342 GQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQ  419 (451)
Q Consensus       342 geKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqq  419 (451)
                      ++++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|..|+++|+++++|+|..|+..|.....+..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46899998  5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHH
Q psy677          420 QQQN  423 (451)
Q Consensus       420 hQqn  423 (451)
                      |++.
T Consensus        81 H~~~   84 (90)
T 1a1h_A           81 HTKI   84 (90)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            9764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.1e-13  Score=117.25  Aligned_cols=72  Identities=25%  Similarity=0.433  Sum_probs=64.5

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHH-Hh---cCCCCccCcccccccCCcchhhhh-hhcccCCCceecCCCCC
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIR-IH---TGQKPFQCRICMRSFSRSDHLTTH-IRTHTGEKPFSCDVCGR  381 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r-~H---tgeKPf~C~~C~K~F~~~s~Lk~H-~rtHtGeKPfkC~~CgK  381 (451)
                      ....++++|.|.  .|++.|.....|.+|++ .|   .++++|.|..|++.|..+..|.+| +++|+|++||+|.+|.+
T Consensus        11 ~~~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           11 QNKKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             TCCCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             ccCCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            345788999995  59999999999999998 58   668999999999999999999999 89999999999988653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=6e-14  Score=106.43  Aligned_cols=62  Identities=26%  Similarity=0.618  Sum_probs=55.0

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhc-c-cCCCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRT-H-TGEKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rt-H-tGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      +++|+++++|.|..|++.|.....|.+|+++ | .++++|.|..|++.|.+...|.+|+++|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3568889999999999999999999999988 7 588999999999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=1.3e-13  Score=112.93  Aligned_cols=52  Identities=25%  Similarity=0.497  Sum_probs=25.6

Q ss_pred             CCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHH
Q psy677          342 GQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA  393 (451)
Q Consensus       342 geKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hl  393 (451)
                      ..++|.|++|++.|.++..|.+|+++|++++||.|.+|+|.|.+...|.+|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            3344444444444444444445544444555555555555555555555553

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=9.4e-14  Score=108.61  Aligned_cols=70  Identities=30%  Similarity=0.524  Sum_probs=65.3

Q ss_pred             cCCCCccCcc--cccccCCcchhhhhhh-cccCCCceecCC--CCCccCChHHHHHHHHHHhCcccchHHHHHHH
Q psy677          341 TGQKPFQCRI--CMRSFSRSDHLTTHIR-THTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQRSKKESKMAVM  410 (451)
Q Consensus       341 tgeKPf~C~~--C~K~F~~~s~Lk~H~r-tHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~  410 (451)
                      +++++|.|..  |++.|.....|.+|++ +|.++++|.|.+  |++.|.+...|.+|+++|+++++|+|..|+..
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            4688999997  9999999999999999 799999999999  99999999999999999999999999887643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.9e-13  Score=104.19  Aligned_cols=64  Identities=25%  Similarity=0.527  Sum_probs=60.2

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCce
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPF  374 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPf  374 (451)
                      .+.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++|++++|.
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            467889999955  9999999999999999999999999999999999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.37  E-value=2.4e-13  Score=99.94  Aligned_cols=56  Identities=27%  Similarity=0.602  Sum_probs=39.4

Q ss_pred             CccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      ||.|..|++.|.....|.+|+++|+++++|.|..|++.|.+...|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46677777777777777777777777777777777777777777777777776654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.4e-13  Score=116.52  Aligned_cols=66  Identities=20%  Similarity=0.330  Sum_probs=61.9

Q ss_pred             cCCCCccCcccccccCCcchhhhhhh-cc---cCCCceecCCCCCccCChHHHHHH-HHHHhCcccchHHH
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIR-TH---TGEKPFSCDVCGRKFARSDEKKRH-AKVHLKQRSKKESK  406 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~r-tH---tGeKPfkC~~CgK~Fs~~s~Lk~H-lrtH~~er~~k~~~  406 (451)
                      +|+++|.|..|++.|..+..|.+|++ +|   .+++||+|.+|++.|.....|.+| +++|+++++|+|..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            57899999999999999999999998 59   678999999999999999999999 89999999999874

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=4.8e-13  Score=103.63  Aligned_cols=65  Identities=42%  Similarity=0.796  Sum_probs=60.6

Q ss_pred             CCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCC
Q psy677          306 PSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       306 ~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      ..++|.++++|.|.+  |++.|.....|.+|+++|.++++|.|.+|++.|.....|.+|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            456788999999955  99999999999999999999999999999999999999999999998864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.9e-13  Score=107.23  Aligned_cols=54  Identities=30%  Similarity=0.674  Sum_probs=28.9

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccC---CCceecCCCCCccCChHHHHHHH
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTG---EKPFSCDVCGRKFARSDEKKRHA  393 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG---eKPfkC~~CgK~Fs~~s~Lk~Hl  393 (451)
                      |+++++|.|.+|++.|.....|.+|+++|++   +++|.|.+|++.|.+...|.+|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            4445555555555555555555555555543   45555555555555555555555

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.5e-13  Score=111.19  Aligned_cols=74  Identities=18%  Similarity=0.386  Sum_probs=66.0

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccC-ChHHHHHHHHHhcC-CCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          304 NRPSKTPVHERPYACPVENCDRRFS-RSDELTRHIRIHTG-QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       304 ~~~skt~~~eKpy~C~~e~Cgk~F~-s~s~L~rH~r~Htg-eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      ..+.+.|.++++|.|.+  |++.|. ....|.+|+++|++ +++|.|.+|++.|..+..|.+|+++|++++|+.....
T Consensus        13 ~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~~   88 (98)
T 2gqj_A           13 EQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEAS   88 (98)
T ss_dssp             SHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCCC
T ss_pred             HHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34456788899999954  999999 99999999999998 9999999999999999999999999999999765433

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.4e-12  Score=100.69  Aligned_cols=61  Identities=87%  Similarity=1.425  Sum_probs=35.9

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      ..+.++++|.|.++.|++.|.....|.+|+++|.++++|.|..|++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3445556666644346666666666666666666655666666666665555555555555

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=8.4e-13  Score=98.17  Aligned_cols=56  Identities=46%  Similarity=1.002  Sum_probs=39.4

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHH-HHHhCc
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHA-KVHLKQ  399 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hl-rtH~~e  399 (451)
                      ++|.|..|++.|.....|.+|+++|+++++|.|..|++.|.+...|.+|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46777777777777777777777777777777777777777777777775 566544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.7e-13  Score=104.82  Aligned_cols=65  Identities=45%  Similarity=0.900  Sum_probs=57.5

Q ss_pred             HHHHHH-HhcCCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHh
Q psy677          333 LTRHIR-IHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       333 L~rH~r-~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      +..|+. .|.++++|.|.  .|++.|.....|.+|+++|+++++|.|.+|++.|.+...|.+|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344444 47789999997  599999999999999999999999999999999999999999999884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.28  E-value=6.7e-13  Score=107.86  Aligned_cols=82  Identities=32%  Similarity=0.603  Sum_probs=77.0

Q ss_pred             CCCCccCcc--cccccCCcchhhhhhhcccCCCceecC--CCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Q psy677          342 GQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQ  417 (451)
Q Consensus       342 geKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~q  417 (451)
                      ..++|.|.+  |++.|.....|.+|+++|+++++|.|.  .|++.|.....|.+|+++|+++++|+|..|+..|.....+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            467899997  999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q psy677          418 QQQQQN  423 (451)
Q Consensus       418 qqhQqn  423 (451)
                      ..|++.
T Consensus        92 ~~H~~~   97 (100)
T 2ebt_A           92 ALHMKR   97 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.28  E-value=5.4e-13  Score=106.16  Aligned_cols=80  Identities=39%  Similarity=0.703  Sum_probs=75.7

Q ss_pred             CCCccCcc--cccccCCcchhhhhhhcccCCCceecC--CCCCccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Q psy677          343 QKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQ  418 (451)
Q Consensus       343 eKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qq  418 (451)
                      .+.|.|.+  |++.|.....|..|+++|+++++|.|.  .|++.|.....|.+|+++|.++++|+|..|+..|.....+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            56899999  999999999999999999999999997  69999999999999999999999999999999999998888


Q ss_pred             HHHH
Q psy677          419 QQQQ  422 (451)
Q Consensus       419 qhQq  422 (451)
                      .|++
T Consensus        83 ~H~~   86 (89)
T 2wbs_A           83 LHMK   86 (89)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            8865

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=2.9e-12  Score=104.92  Aligned_cols=63  Identities=30%  Similarity=0.614  Sum_probs=56.7

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhh-hcccCCC
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGEK  372 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~-rtHtGeK  372 (451)
                      ..+...++|.|.+  |++.|.+...|.+|+++|+++++|.|.+|++.|.++..|.+|+ ++|.+|.
T Consensus        21 ~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4456678899955  9999999999999999999999999999999999999999997 5787764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=2.1e-12  Score=94.86  Aligned_cols=57  Identities=28%  Similarity=0.630  Sum_probs=50.2

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      ++++|.|.+  |++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|++
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            367899955  999999999999999999999999999999999999999999999874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.24  E-value=4.4e-12  Score=93.09  Aligned_cols=56  Identities=34%  Similarity=0.765  Sum_probs=53.1

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      ||.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+++|+++|
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58895  499999999999999999999999999999999999999999999999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=7.6e-12  Score=101.03  Aligned_cols=60  Identities=37%  Similarity=0.567  Sum_probs=34.4

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHH-hcCCCC--------ccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          316 YACPVENCDRRFSRSDELTRHIRI-HTGQKP--------FQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~-HtgeKP--------f~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |.|  ..|++.|.....|.+|++. |.++++        |.|..|++.|.....|.+|+++|++++||+|+
T Consensus        26 ~~C--~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSC--CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             Ccc--cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            445  3477777777777777766 666655        45555555555555555555555555555543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5e-12  Score=99.00  Aligned_cols=68  Identities=19%  Similarity=0.407  Sum_probs=60.0

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcC---CCCccCcccccccCCcchhhhhh-hcccCCCceecCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTG---QKPFQCRICMRSFSRSDHLTTHI-RTHTGEKPFSCDV  378 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htg---eKPf~C~~C~K~F~~~s~Lk~H~-rtHtGeKPfkC~~  378 (451)
                      .|.++++|.|.+  |++.|.....|.+|+++|++   +++|.|.+|++.|.....|.+|+ +.|.++++.....
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            367899999955  99999999999999999986   89999999999999999999999 5677777765443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1e-12  Score=100.58  Aligned_cols=68  Identities=21%  Similarity=0.370  Sum_probs=61.3

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          303 PNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       303 p~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      ...+.+.|.++++|.|.+  |++.|.....|..       +++|.|..|++.|.....|.+|+++|+++++|.|++|
T Consensus         6 l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            445667889999999954  9999999888876       7899999999999999999999999999999999988

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.22  E-value=1.6e-12  Score=102.07  Aligned_cols=76  Identities=24%  Similarity=0.472  Sum_probs=70.5

Q ss_pred             CccC--cccccccCCcchhhhhhhcccCCCceecCC--CCCccCChHHHHHHHHHHhCcccchHHH---HHHHHHHHHHH
Q psy677          345 PFQC--RICMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQRSKKESK---MAVMMSQQQAQ  417 (451)
Q Consensus       345 Pf~C--~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~er~~k~~~---~~~~~~qqq~q  417 (451)
                      ||.|  ..|++.|.....|..|+++|+++++|+|..  |++.|.....|.+|+++|++   ++|..   |+..+.....+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6899  899999999999999999999999999988  99999999999999999998   88888   98888888888


Q ss_pred             HHHHHH
Q psy677          418 QQQQQN  423 (451)
Q Consensus       418 qqhQqn  423 (451)
                      ..|++.
T Consensus        78 ~~H~~~   83 (85)
T 2j7j_A           78 LKHVAE   83 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8.6e-15  Score=112.24  Aligned_cols=70  Identities=19%  Similarity=0.362  Sum_probs=64.6

Q ss_pred             hHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          330 SDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       330 ~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      ...|..|+++|.++++|.|..|++.|.....|..       +++|.|..|++.|.+...|.+|+++|+++++|+|..
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            3457789999999999999999999999999987       789999999999999999999999999999998864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.3e-11  Score=96.55  Aligned_cols=68  Identities=31%  Similarity=0.660  Sum_probs=59.5

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHH-HhcCC-CCccCcccccccCCcchhhhhhhcccC-CCc
Q psy677          304 NRPSKTPVHERPYACPVENCDRRFSRSDELTRHIR-IHTGQ-KPFQCRICMRSFSRSDHLTTHIRTHTG-EKP  373 (451)
Q Consensus       304 ~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r-~Htge-KPf~C~~C~K~F~~~s~Lk~H~rtHtG-eKP  373 (451)
                      .++.++|.++++|.|.+  |++.|.....|.+|++ .|.++ ++|.|..|++.|.....|.+|+++|++ +.|
T Consensus         4 ~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            46678899999999955  9999999999999998 67764 899999999999999999999998654 444

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=9.1e-12  Score=100.57  Aligned_cols=61  Identities=28%  Similarity=0.429  Sum_probs=57.9

Q ss_pred             CccCcccccccCCcchhhhhhhc-ccCCCc--------eecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRT-HTGEKP--------FSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rt-HtGeKP--------fkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|.|..|++.|.....|.+|+++ |.++++        |.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            47899999999999999999998 999888        99999999999999999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.19  E-value=3.9e-13  Score=115.07  Aligned_cols=113  Identities=13%  Similarity=0.115  Sum_probs=88.3

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccC------CcchhhhhhhcccCCCceecCCCCC
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFS------RSDHLTTHIRTHTGEKPFSCDVCGR  381 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~------~~s~Lk~H~rtHtGeKPfkC~~CgK  381 (451)
                      .++.+.++|.|.+.++...|.....+..|.. ...++.|.|++|.+.|.      ....|..|+ .|++++||.|.+|++
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l-~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQL-TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLM   82 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTS-CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCC
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccC-ChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCc
Confidence            4677889999977666655644333222222 22356788988876665      566677777 689999999999999


Q ss_pred             ccCChHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Q psy677          382 KFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNH  424 (451)
Q Consensus       382 ~Fs~~s~Lk~HlrtH~~er~~k~~~~~~~~~qqq~qqqhQqn~  424 (451)
                      .|.+...|.+|+++|  +++|+|..|+..|.....+..|++..
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h  123 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK  123 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHH
Confidence            999999999999999  89999999999999999999998754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.6e-11  Score=101.86  Aligned_cols=64  Identities=19%  Similarity=0.377  Sum_probs=56.9

Q ss_pred             CCCCCCccCCCCCCCCcc-CChHHHHHHHHHhcCCCCccCcccccccCCcchhhhh-hhcccCCCceec
Q psy677          310 PVHERPYACPVENCDRRF-SRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH-IRTHTGEKPFSC  376 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F-~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H-~rtHtGeKPfkC  376 (451)
                      +.++++|.|.  .|++.| ....+|..|+++| ++++|.|.+|++.|..+..|++| +++|+++..|.+
T Consensus        29 ~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           29 IVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             hcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            4567899995  599999 9999999999999 99999999999999999999999 899987554443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=5.2e-12  Score=95.59  Aligned_cols=61  Identities=28%  Similarity=0.641  Sum_probs=55.8

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHH-h-cCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRI-H-TGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~-H-tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      .+|.++++|.|.  .|++.|.....|.+|++. | .++++|.|+.|++.|.....|.+|+++|++
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            356788999995  499999999999999998 7 589999999999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.9e-11  Score=90.81  Aligned_cols=56  Identities=43%  Similarity=0.974  Sum_probs=51.8

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhh-hcccCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGE  371 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~-rtHtGe  371 (451)
                      ++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|.+|+ ++|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            579995  49999999999999999999999999999999999999999997 688765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.3e-12  Score=95.97  Aligned_cols=54  Identities=20%  Similarity=0.448  Sum_probs=26.7

Q ss_pred             CCCccCcccccccCCcchhhhhhhcccCCCceecC-CCCCccCChHHHHHHHHHHhC
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD-VCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~-~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      +++|.|..|++.|. ...|..|+++ ++++||+|. .|++.|..+..|.+|+++|..
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            34444555555554 4445555444 444555555 455555555555555554443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.14  E-value=4.6e-11  Score=92.03  Aligned_cols=61  Identities=41%  Similarity=0.780  Sum_probs=47.0

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtH  368 (451)
                      ......++|.|.+.+|++.|.....|.+|+++|+++++|.|.+  |++.|.....|.+|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3445667788865558888888888888888888888888854  888888888888887765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.11  E-value=1.6e-11  Score=94.61  Aligned_cols=57  Identities=49%  Similarity=0.931  Sum_probs=52.8

Q ss_pred             hcCCCCccCcc--cccccCCcchhhhhhhcccCCCceecCC--CCCccCChHHHHHHHHHH
Q psy677          340 HTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       340 HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH  396 (451)
                      +...++|.|..  |++.|.....|.+|+++|+++++|+|.+  |++.|.+...|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            35678999998  9999999999999999999999999975  999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=8.6e-12  Score=88.08  Aligned_cols=44  Identities=36%  Similarity=0.637  Sum_probs=27.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=8.8e-12  Score=88.02  Aligned_cols=44  Identities=32%  Similarity=0.504  Sum_probs=26.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45555566666666666666666666666666666666666555

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=9.1e-12  Score=87.77  Aligned_cols=44  Identities=41%  Similarity=0.613  Sum_probs=25.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.09  E-value=8.1e-12  Score=88.05  Aligned_cols=44  Identities=36%  Similarity=0.586  Sum_probs=25.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555566666666666666666666666666666665554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=8.3e-12  Score=88.00  Aligned_cols=43  Identities=40%  Similarity=0.597  Sum_probs=18.9

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|+++++|.|..|++.|.+...|.+|+++|++++||+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.3e-11  Score=87.05  Aligned_cols=44  Identities=41%  Similarity=0.574  Sum_probs=25.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555566666666666666666666666666666665554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=1.4e-11  Score=87.09  Aligned_cols=43  Identities=42%  Similarity=0.657  Sum_probs=20.2

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444444444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.09  E-value=8.2e-12  Score=88.33  Aligned_cols=40  Identities=30%  Similarity=0.689  Sum_probs=15.8

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            3333333333444334444444333444433333333333

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.09  E-value=8.7e-12  Score=88.03  Aligned_cols=44  Identities=36%  Similarity=0.607  Sum_probs=20.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-11  Score=87.59  Aligned_cols=45  Identities=42%  Similarity=0.665  Sum_probs=34.7

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777778888888888888888888877877778877776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.6e-12  Score=88.06  Aligned_cols=43  Identities=35%  Similarity=0.689  Sum_probs=19.2

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|+++++|.|.+|++.|.....|.+|+++|+++++|+|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=86.70  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=25.4

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-11  Score=87.23  Aligned_cols=44  Identities=39%  Similarity=0.670  Sum_probs=26.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555666666666666666666666666666666666555

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.8e-12  Score=87.85  Aligned_cols=44  Identities=36%  Similarity=0.649  Sum_probs=24.1

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.3e-11  Score=87.36  Aligned_cols=44  Identities=36%  Similarity=0.586  Sum_probs=25.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555566666666666666666666666666666665554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-11  Score=86.71  Aligned_cols=44  Identities=36%  Similarity=0.625  Sum_probs=24.6

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|++++||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.1e-11  Score=87.59  Aligned_cols=41  Identities=34%  Similarity=0.658  Sum_probs=17.1

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444433

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.08  E-value=6.8e-11  Score=86.77  Aligned_cols=51  Identities=14%  Similarity=0.260  Sum_probs=47.3

Q ss_pred             ccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccc
Q psy677          352 MRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       352 ~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~  402 (451)
                      +|.|.....|..|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            477889999999999999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-11  Score=87.31  Aligned_cols=33  Identities=39%  Similarity=0.823  Sum_probs=11.9

Q ss_pred             ccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          368 HTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       368 HtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |+++++|.|.+|++.|.+...|.+|+++|.+++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER   39 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCS
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCC
Confidence            333333333333333333333333333333333

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-11  Score=87.01  Aligned_cols=44  Identities=36%  Similarity=0.610  Sum_probs=23.7

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.3e-11  Score=86.91  Aligned_cols=44  Identities=36%  Similarity=0.602  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.5e-11  Score=86.80  Aligned_cols=44  Identities=36%  Similarity=0.542  Sum_probs=23.1

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1e-11  Score=87.51  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=21.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444445555555555544455555544544455544444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.9e-12  Score=87.84  Aligned_cols=41  Identities=27%  Similarity=0.624  Sum_probs=19.2

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|.++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=86.77  Aligned_cols=44  Identities=39%  Similarity=0.647  Sum_probs=23.8

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.07  E-value=1.7e-11  Score=86.33  Aligned_cols=44  Identities=36%  Similarity=0.616  Sum_probs=22.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.6e-12  Score=87.82  Aligned_cols=40  Identities=40%  Similarity=0.775  Sum_probs=15.5

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3333333333333333333333333333333333333333

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.9e-12  Score=87.99  Aligned_cols=41  Identities=24%  Similarity=0.536  Sum_probs=20.4

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            44444445555555555555555555555555554444444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.8e-11  Score=86.39  Aligned_cols=40  Identities=43%  Similarity=0.718  Sum_probs=15.8

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++++|.|.+|++.|.....|.+|+++|++++||+|.+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3333333344334444433333444433333333443333

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.8e-11  Score=86.43  Aligned_cols=44  Identities=39%  Similarity=0.695  Sum_probs=20.6

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9e-12  Score=87.95  Aligned_cols=41  Identities=29%  Similarity=0.673  Sum_probs=20.8

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            44445555555555555555555555555555555554444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.2e-11  Score=87.47  Aligned_cols=44  Identities=36%  Similarity=0.528  Sum_probs=22.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|.+|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444445555555555555555555555555555555555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.8e-12  Score=87.78  Aligned_cols=41  Identities=27%  Similarity=0.609  Sum_probs=18.7

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-11  Score=87.70  Aligned_cols=41  Identities=24%  Similarity=0.635  Sum_probs=18.6

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.3e-11  Score=86.25  Aligned_cols=38  Identities=26%  Similarity=0.615  Sum_probs=15.2

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      ++|+++++|+|.+|++.|.+...|.+|+++|+++++|+
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            33333444444444444444444444444444433333

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.4e-11  Score=87.01  Aligned_cols=41  Identities=39%  Similarity=0.691  Sum_probs=17.5

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            33344444444444444444444444444444444444443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-11  Score=86.80  Aligned_cols=44  Identities=36%  Similarity=0.673  Sum_probs=27.6

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2e-11  Score=85.98  Aligned_cols=43  Identities=30%  Similarity=0.459  Sum_probs=19.0

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|+++++|+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.05  E-value=1.8e-11  Score=86.59  Aligned_cols=43  Identities=35%  Similarity=0.515  Sum_probs=20.0

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3344444444444444444444444444444444444444443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.8e-11  Score=86.42  Aligned_cols=41  Identities=29%  Similarity=0.653  Sum_probs=17.7

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-11  Score=87.52  Aligned_cols=43  Identities=30%  Similarity=0.703  Sum_probs=23.5

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            3555555555555555555555555555555555555555543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=5.9e-11  Score=87.23  Aligned_cols=47  Identities=34%  Similarity=0.815  Sum_probs=26.5

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHH-HhcCCCCccCcccccccCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRSFSR  357 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r-~HtgeKPf~C~~C~K~F~~  357 (451)
                      .+.++++|.|.  .|++.|.....|.+|++ +|.++++|.|.+|++.|..
T Consensus         6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            34555566663  36666666666666654 5555555555555555543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=2.2e-11  Score=85.93  Aligned_cols=38  Identities=37%  Similarity=0.766  Sum_probs=14.4

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++++|.|..|++.|.....|.+|+++|+++++|+|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-11  Score=86.46  Aligned_cols=44  Identities=30%  Similarity=0.567  Sum_probs=23.4

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.3e-11  Score=85.82  Aligned_cols=41  Identities=22%  Similarity=0.366  Sum_probs=18.6

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.4e-11  Score=85.02  Aligned_cols=44  Identities=36%  Similarity=0.587  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhh-cccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~r-tHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|++ +|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4445555555555555555555555555555 5555555555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.4e-11  Score=86.96  Aligned_cols=41  Identities=24%  Similarity=0.620  Sum_probs=17.4

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444433

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.6e-10  Score=88.06  Aligned_cols=60  Identities=18%  Similarity=0.382  Sum_probs=54.8

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc-ccccccCCcchhhhhhhcccCCCc
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR-ICMRSFSRSDHLTTHIRTHTGEKP  373 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~-~C~K~F~~~s~Lk~H~rtHtGeKP  373 (451)
                      ..++++|.|.  .|++.|. ...|..|+++ +++++|.|. .|++.|..+..|.+|+++|...++
T Consensus         5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4567899995  5999999 9999999999 999999999 999999999999999999977655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.5e-11  Score=85.76  Aligned_cols=39  Identities=28%  Similarity=0.594  Sum_probs=15.3

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      +++|+++++|+|.+|++.|.+...|.+|+++|+++++|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            333333333333333333333333333333333333333

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.9e-11  Score=82.67  Aligned_cols=45  Identities=27%  Similarity=0.531  Sum_probs=43.3

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.00  E-value=1.1e-10  Score=82.36  Aligned_cols=45  Identities=40%  Similarity=0.706  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.7e-11  Score=84.89  Aligned_cols=41  Identities=27%  Similarity=0.614  Sum_probs=19.8

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=81.89  Aligned_cols=45  Identities=40%  Similarity=0.622  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=81.91  Aligned_cols=45  Identities=40%  Similarity=0.539  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=82.19  Aligned_cols=45  Identities=29%  Similarity=0.487  Sum_probs=43.3

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588899999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=81.86  Aligned_cols=45  Identities=31%  Similarity=0.616  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=81.75  Aligned_cols=45  Identities=38%  Similarity=0.646  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=82.03  Aligned_cols=44  Identities=27%  Similarity=0.568  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=81.45  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=81.34  Aligned_cols=45  Identities=33%  Similarity=0.618  Sum_probs=43.1

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=81.69  Aligned_cols=44  Identities=36%  Similarity=0.736  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.8e-10  Score=79.98  Aligned_cols=43  Identities=28%  Similarity=0.564  Sum_probs=35.6

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5778888888888888888888888888888888888888774

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=81.49  Aligned_cols=45  Identities=38%  Similarity=0.681  Sum_probs=43.2

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.9e-10  Score=80.23  Aligned_cols=43  Identities=33%  Similarity=0.620  Sum_probs=37.8

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5888888899999999999999999999999999988888875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=80.39  Aligned_cols=43  Identities=30%  Similarity=0.632  Sum_probs=34.6

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5777888888888888888888888888888888888887764

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=82.17  Aligned_cols=45  Identities=29%  Similarity=0.617  Sum_probs=42.3

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998643

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.96  E-value=1.2e-10  Score=82.10  Aligned_cols=44  Identities=30%  Similarity=0.641  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999864

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.8e-10  Score=80.40  Aligned_cols=44  Identities=34%  Similarity=0.549  Sum_probs=42.3

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=81.90  Aligned_cols=44  Identities=32%  Similarity=0.662  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=81.85  Aligned_cols=45  Identities=27%  Similarity=0.660  Sum_probs=42.3

Q ss_pred             hhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       362 k~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .+|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            368999999999999999999999999999999999999998864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.5e-11  Score=83.14  Aligned_cols=41  Identities=44%  Similarity=0.732  Sum_probs=18.8

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.96  E-value=2.8e-10  Score=80.26  Aligned_cols=43  Identities=33%  Similarity=0.665  Sum_probs=34.8

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5777888888888888888888888888888888888887764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.96  E-value=1.2e-11  Score=93.92  Aligned_cols=52  Identities=17%  Similarity=0.424  Sum_probs=34.4

Q ss_pred             HHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHH
Q psy677          334 TRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDE  388 (451)
Q Consensus       334 ~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~  388 (451)
                      ..|+++|+++++|.|+.|++.|.....|.   ++|+++++|+|.+|++.|....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            34566666777777777777776666654   56777777777777777765544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=81.71  Aligned_cols=46  Identities=33%  Similarity=0.629  Sum_probs=42.7

Q ss_pred             hhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       362 k~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      ++|+++|+++++|.|++|++.|.+...|.+|+++|+++++|+|..|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3699999999999999999999999999999999999999998643

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=78.94  Aligned_cols=42  Identities=24%  Similarity=0.527  Sum_probs=35.6

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            578888888888888888888888888888888888888776

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=8.5e-11  Score=83.01  Aligned_cols=40  Identities=30%  Similarity=0.743  Sum_probs=16.8

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            3344444444444444444444444444444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=81.43  Aligned_cols=44  Identities=27%  Similarity=0.552  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=80.62  Aligned_cols=43  Identities=37%  Similarity=0.695  Sum_probs=35.1

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5778888888888888888888888888888888888887764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=82.04  Aligned_cols=44  Identities=23%  Similarity=0.469  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            68999999999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=7.7e-11  Score=82.93  Aligned_cols=41  Identities=27%  Similarity=0.633  Sum_probs=19.5

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.5e-10  Score=77.82  Aligned_cols=41  Identities=27%  Similarity=0.564  Sum_probs=28.5

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|.++++|+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            55666777777777777777777777777777777666654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.95  E-value=1.2e-10  Score=81.90  Aligned_cols=45  Identities=22%  Similarity=0.427  Sum_probs=42.4

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998653

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.95  E-value=1.9e-10  Score=81.20  Aligned_cols=44  Identities=34%  Similarity=0.628  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.7e-11  Score=83.55  Aligned_cols=41  Identities=27%  Similarity=0.590  Sum_probs=19.9

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.3e-10  Score=82.11  Aligned_cols=46  Identities=20%  Similarity=0.412  Sum_probs=42.7

Q ss_pred             hhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       362 k~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      .+|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3699999999999999999999999999999999999999998643

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.9e-10  Score=80.19  Aligned_cols=43  Identities=28%  Similarity=0.595  Sum_probs=31.1

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667777777777777777777777777777777777777664

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=81.64  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4e-10  Score=79.47  Aligned_cols=43  Identities=23%  Similarity=0.515  Sum_probs=34.1

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4777788888888888888888888888888888888877764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.2e-10  Score=79.11  Aligned_cols=43  Identities=28%  Similarity=0.689  Sum_probs=35.6

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            5778888888888888888888888888888888888888774

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.3e-10  Score=81.67  Aligned_cols=44  Identities=27%  Similarity=0.582  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.94  E-value=2.5e-10  Score=78.74  Aligned_cols=41  Identities=27%  Similarity=0.639  Sum_probs=26.1

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45566666666666666666666666666666666666654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=2.1e-10  Score=81.94  Aligned_cols=41  Identities=34%  Similarity=0.633  Sum_probs=20.1

Q ss_pred             cCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCC
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGR  381 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK  381 (451)
                      .++++|.|.+|++.|.....|.+|+++|+++++|+|.+|+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            34444445445555555555555555555555555555543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.94  E-value=1.7e-10  Score=81.17  Aligned_cols=45  Identities=29%  Similarity=0.563  Sum_probs=42.3

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|.++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999998653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-10  Score=82.17  Aligned_cols=41  Identities=29%  Similarity=0.658  Sum_probs=17.9

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|..|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            34444444444444444444444444444444444444433

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.1e-10  Score=82.19  Aligned_cols=40  Identities=33%  Similarity=0.624  Sum_probs=16.3

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            3333444444444444444444444444444444444333

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=80.30  Aligned_cols=44  Identities=30%  Similarity=0.599  Sum_probs=41.8

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.8e-11  Score=82.90  Aligned_cols=41  Identities=29%  Similarity=0.690  Sum_probs=18.0

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            34444444444444444444444444444444444444433

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.9e-10  Score=80.04  Aligned_cols=45  Identities=24%  Similarity=0.246  Sum_probs=42.9

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377889999999999999999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.94  E-value=1e-10  Score=80.68  Aligned_cols=42  Identities=36%  Similarity=0.683  Sum_probs=28.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            445666667777777777777777777777777777777663

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.9e-10  Score=81.04  Aligned_cols=45  Identities=38%  Similarity=0.635  Sum_probs=43.1

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-10  Score=82.44  Aligned_cols=40  Identities=45%  Similarity=0.817  Sum_probs=17.4

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444444444444444444444444444444444433

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=81.54  Aligned_cols=45  Identities=29%  Similarity=0.608  Sum_probs=42.2

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999998643

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=81.66  Aligned_cols=44  Identities=27%  Similarity=0.626  Sum_probs=41.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|.++++|+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-10  Score=80.59  Aligned_cols=41  Identities=39%  Similarity=0.721  Sum_probs=21.4

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=81.92  Aligned_cols=44  Identities=30%  Similarity=0.567  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999999999999999999999999999999999999999864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=81.47  Aligned_cols=45  Identities=29%  Similarity=0.666  Sum_probs=42.2

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999988643

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.3e-10  Score=79.30  Aligned_cols=43  Identities=23%  Similarity=0.519  Sum_probs=32.3

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677777777777777777777777777777777777777664

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-10  Score=81.48  Aligned_cols=44  Identities=32%  Similarity=0.649  Sum_probs=41.8

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-10  Score=82.00  Aligned_cols=41  Identities=29%  Similarity=0.669  Sum_probs=18.4

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.7e-10  Score=80.54  Aligned_cols=44  Identities=32%  Similarity=0.568  Sum_probs=42.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.4e-10  Score=82.09  Aligned_cols=39  Identities=38%  Similarity=0.823  Sum_probs=16.9

Q ss_pred             HHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       338 r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      ++|+++++|.|..|++.|.+...|.+|+++|+++++|+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            334444444444444444444444444444444444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4e-10  Score=77.69  Aligned_cols=41  Identities=24%  Similarity=0.612  Sum_probs=35.6

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|..|++.|.+...|.+|+++|.++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            77888888899999999999999999999888988888765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.6e-10  Score=78.85  Aligned_cols=42  Identities=24%  Similarity=0.569  Sum_probs=32.0

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            577777777777777777777777777777777777777765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.3e-10  Score=79.79  Aligned_cols=43  Identities=33%  Similarity=0.550  Sum_probs=36.0

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788888888888888888888888888888888888888764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3e-10  Score=79.85  Aligned_cols=44  Identities=36%  Similarity=0.631  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=9.4e-11  Score=82.79  Aligned_cols=42  Identities=38%  Similarity=0.663  Sum_probs=20.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.9e-10  Score=79.57  Aligned_cols=43  Identities=30%  Similarity=0.697  Sum_probs=34.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5777888888888888888888888888888888888887764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.2e-11  Score=83.10  Aligned_cols=42  Identities=36%  Similarity=0.642  Sum_probs=19.8

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.3e-10  Score=81.85  Aligned_cols=41  Identities=27%  Similarity=0.610  Sum_probs=18.1

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444433

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.9e-10  Score=80.07  Aligned_cols=44  Identities=36%  Similarity=0.647  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=80.34  Aligned_cols=44  Identities=34%  Similarity=0.598  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.2e-10  Score=80.72  Aligned_cols=45  Identities=29%  Similarity=0.535  Sum_probs=42.2

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999998653

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.92  E-value=9.3e-11  Score=82.80  Aligned_cols=42  Identities=50%  Similarity=0.744  Sum_probs=20.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.92  E-value=8.2e-11  Score=86.33  Aligned_cols=52  Identities=19%  Similarity=0.317  Sum_probs=48.4

Q ss_pred             CCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCcee
Q psy677          324 DRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS  375 (451)
Q Consensus       324 gk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfk  375 (451)
                      ++.|.....|..|+++|+++++|.|..|++.|.....|.+|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            5678888889999999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=8.8e-11  Score=82.65  Aligned_cols=41  Identities=29%  Similarity=0.677  Sum_probs=21.3

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44555555555555555555555555555555555555444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=81.70  Aligned_cols=45  Identities=29%  Similarity=0.686  Sum_probs=42.3

Q ss_pred             hhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          362 TTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       362 k~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .+|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CCcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            369999999999999999999999999999999999999998864

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2e-10  Score=80.92  Aligned_cols=44  Identities=30%  Similarity=0.580  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48999999999999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=82.02  Aligned_cols=41  Identities=22%  Similarity=0.549  Sum_probs=21.8

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            44555555555555555555555555555555555555544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=79.80  Aligned_cols=41  Identities=29%  Similarity=0.523  Sum_probs=25.7

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34556666666666666666666666666666666666665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.5e-10  Score=81.65  Aligned_cols=41  Identities=32%  Similarity=0.670  Sum_probs=20.3

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            44444444555555555555555555555545544444444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3e-10  Score=80.16  Aligned_cols=44  Identities=41%  Similarity=0.732  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.2e-10  Score=81.91  Aligned_cols=41  Identities=27%  Similarity=0.537  Sum_probs=22.4

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|..|++.|.+...|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.4e-10  Score=79.56  Aligned_cols=44  Identities=41%  Similarity=0.702  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.2e-10  Score=79.83  Aligned_cols=44  Identities=36%  Similarity=0.652  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.5e-10  Score=79.82  Aligned_cols=44  Identities=32%  Similarity=0.496  Sum_probs=42.4

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |+++|.++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.7e-10  Score=79.67  Aligned_cols=44  Identities=41%  Similarity=0.678  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.2e-11  Score=82.93  Aligned_cols=42  Identities=40%  Similarity=0.839  Sum_probs=20.8

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444445555555555555555555555555555555443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.9e-10  Score=79.06  Aligned_cols=42  Identities=24%  Similarity=0.500  Sum_probs=25.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            455666666666666666666666666666666666666554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.8e-10  Score=80.19  Aligned_cols=43  Identities=30%  Similarity=0.692  Sum_probs=41.2

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999999999875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.3e-10  Score=82.02  Aligned_cols=42  Identities=36%  Similarity=0.545  Sum_probs=21.0

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      +.|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444455555522  55555555555555555555555555444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.91  E-value=2.3e-10  Score=80.73  Aligned_cols=44  Identities=18%  Similarity=0.456  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58999999999999999999999999999999999999998864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.6e-10  Score=79.61  Aligned_cols=44  Identities=30%  Similarity=0.548  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.1e-10  Score=79.91  Aligned_cols=44  Identities=27%  Similarity=0.582  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~  406 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=81.64  Aligned_cols=42  Identities=33%  Similarity=0.679  Sum_probs=24.7

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555666666666666666666666666666666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=80.32  Aligned_cols=42  Identities=38%  Similarity=0.568  Sum_probs=28.8

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            556666667777777777777777777777777777777663

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.1e-10  Score=79.93  Aligned_cols=44  Identities=39%  Similarity=0.625  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.3e-10  Score=79.64  Aligned_cols=44  Identities=39%  Similarity=0.669  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.91  E-value=6.1e-10  Score=76.60  Aligned_cols=41  Identities=20%  Similarity=0.476  Sum_probs=34.2

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67788888888888888888888888888888888888765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.3e-10  Score=80.79  Aligned_cols=41  Identities=41%  Similarity=0.783  Sum_probs=22.1

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|+++++|+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555555555553

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=3.6e-10  Score=78.81  Aligned_cols=42  Identities=17%  Similarity=0.326  Sum_probs=30.5

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.++++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            566777777777777777777777777777777777777665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-10  Score=82.06  Aligned_cols=42  Identities=38%  Similarity=0.674  Sum_probs=21.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444455555555555555555555555555555555543

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.7e-10  Score=79.54  Aligned_cols=44  Identities=32%  Similarity=0.582  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.3e-10  Score=79.62  Aligned_cols=44  Identities=41%  Similarity=0.662  Sum_probs=41.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47889999999999999999999999999999999999999974

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.5e-10  Score=78.39  Aligned_cols=45  Identities=38%  Similarity=0.711  Sum_probs=42.6

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377889999999999999999999999999999999999999876

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-10  Score=80.84  Aligned_cols=41  Identities=34%  Similarity=0.625  Sum_probs=22.7

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|+|.+|++.|.+...|.+|+++|.++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-10  Score=81.44  Aligned_cols=41  Identities=34%  Similarity=0.645  Sum_probs=20.3

Q ss_pred             CCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc
Q psy677          307 SKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR  349 (451)
Q Consensus       307 skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~  349 (451)
                      .+.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            4 GSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444455555522  555555555555555555555555543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.6e-10  Score=78.51  Aligned_cols=42  Identities=29%  Similarity=0.594  Sum_probs=39.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=8.7e-11  Score=82.97  Aligned_cols=42  Identities=36%  Similarity=0.628  Sum_probs=22.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.4e-10  Score=80.94  Aligned_cols=41  Identities=32%  Similarity=0.547  Sum_probs=27.6

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            55566666666666666666666666666666666666666

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.5e-10  Score=78.93  Aligned_cols=42  Identities=26%  Similarity=0.566  Sum_probs=29.5

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            466677777777777777777777777777777777766654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-10  Score=81.54  Aligned_cols=45  Identities=29%  Similarity=0.583  Sum_probs=42.3

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999998643

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.8e-09  Score=79.24  Aligned_cols=47  Identities=38%  Similarity=0.720  Sum_probs=44.3

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhh-cccCCCceecCCCCCccCC
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCDVCGRKFAR  385 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~r-tHtGeKPfkC~~CgK~Fs~  385 (451)
                      .|.++++|.|..|++.|.....|.+|++ +|+++++|+|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678999999999999999999999997 9999999999999999986

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.7e-10  Score=79.27  Aligned_cols=43  Identities=37%  Similarity=0.665  Sum_probs=40.9

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999999885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=3.8e-10  Score=79.25  Aligned_cols=42  Identities=33%  Similarity=0.639  Sum_probs=24.2

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccc
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICM  352 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~  352 (451)
                      .|.++++|.|.  .|++.|.....|.+|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45555566663  3666666666666666666666666665553

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.2e-10  Score=78.94  Aligned_cols=43  Identities=35%  Similarity=0.633  Sum_probs=40.8

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      .|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3788999999999999999999999999999999999999985

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.2e-10  Score=80.70  Aligned_cols=45  Identities=31%  Similarity=0.560  Sum_probs=42.1

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKM  407 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~~~  407 (451)
                      .|+++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999988643

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=77.76  Aligned_cols=42  Identities=24%  Similarity=0.506  Sum_probs=33.0

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            577778888888888888888888888888888888777754

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.8e-10  Score=80.08  Aligned_cols=41  Identities=39%  Similarity=0.680  Sum_probs=23.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44555555555555555555555555555555555555555

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.2e-10  Score=79.14  Aligned_cols=40  Identities=28%  Similarity=0.685  Sum_probs=21.9

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            4455555555555555555555555555555555555544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=5.1e-10  Score=77.27  Aligned_cols=41  Identities=37%  Similarity=0.691  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.6e-10  Score=81.32  Aligned_cols=41  Identities=27%  Similarity=0.620  Sum_probs=18.9

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|.++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-10  Score=82.40  Aligned_cols=42  Identities=29%  Similarity=0.578  Sum_probs=22.7

Q ss_pred             CCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc
Q psy677          306 PSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR  349 (451)
Q Consensus       306 ~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~  349 (451)
                      +.++|.++++|.|.+  |++.|.....|.+|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            334455555555532  555555555555555555555555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.4e-10  Score=80.66  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=17.9

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhC-cccchH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK-QRSKKE  404 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~-er~~k~  404 (451)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|++ +++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444444444444444444444444444444444 444433

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.9e-10  Score=79.48  Aligned_cols=44  Identities=27%  Similarity=0.545  Sum_probs=41.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHH-HHhCcccchHHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAK-VHLKQRSKKESK  406 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hlr-tH~~er~~k~~~  406 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|++ +|.++++|+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            58999999999999999999999999999999 999999998864

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1e-09  Score=76.63  Aligned_cols=42  Identities=17%  Similarity=0.330  Sum_probs=33.1

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            367777888888888888888888888888888888877766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.1e-10  Score=79.17  Aligned_cols=44  Identities=39%  Similarity=0.622  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDV  378 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~  378 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.9e-10  Score=81.23  Aligned_cols=40  Identities=30%  Similarity=0.647  Sum_probs=19.5

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR  349 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~  349 (451)
                      ++|.++++|.|..  |++.|.....|.+|+++|+++++|.|+
T Consensus         5 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444445555522  555555555555555555555555443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.5e-10  Score=79.65  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=27.2

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            55566666666666666666666666666666666666666

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-10  Score=79.34  Aligned_cols=40  Identities=35%  Similarity=0.670  Sum_probs=21.3

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3445555555555555555555555555555555555544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.84  E-value=2.6e-10  Score=78.46  Aligned_cols=40  Identities=28%  Similarity=0.526  Sum_probs=20.4

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      +++|+++++|.|..|++.|.....|.+|+++|++++||+|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3444455555555555555555555555555555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.2e-10  Score=78.48  Aligned_cols=43  Identities=33%  Similarity=0.667  Sum_probs=40.7

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4789999999999999999999999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4e-10  Score=79.77  Aligned_cols=43  Identities=47%  Similarity=0.753  Sum_probs=18.2

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      +|.++++|.|.+..|++.|.....|.+|+++|+++++|+|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444444444211344444444444444444444444444433

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=3.8e-10  Score=78.87  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=19.2

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccC
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQC  348 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C  348 (451)
                      +.|.++++|.|.  .|++.|.....|.+|+++|+++++|.|
T Consensus         5 ~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECC--CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            344444555552  255555555555555555555555544

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.2e-10  Score=80.66  Aligned_cols=41  Identities=39%  Similarity=0.591  Sum_probs=22.4

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555555

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=8.2e-10  Score=77.86  Aligned_cols=43  Identities=33%  Similarity=0.370  Sum_probs=40.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccC-CCceecCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG-EKPFSCDV  378 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG-eKPfkC~~  378 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++ +++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            77889999999999999999999999999999999 99999974

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.9e-09  Score=74.19  Aligned_cols=45  Identities=31%  Similarity=0.619  Sum_probs=41.2

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      ++.+.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4567889999999955  99999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.1e-10  Score=79.18  Aligned_cols=42  Identities=31%  Similarity=0.445  Sum_probs=30.8

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      +|+++|+++++|.|..|++.|.....|.+|+++|+++++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            356667777777777777777777777777777777777776

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.2e-09  Score=75.72  Aligned_cols=41  Identities=22%  Similarity=0.480  Sum_probs=27.5

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      +++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45666666677766777777666677776666666666653

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=5.5e-10  Score=78.91  Aligned_cols=40  Identities=33%  Similarity=0.586  Sum_probs=24.9

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR  349 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~  349 (451)
                      +.|.++++|.|.  .|++.|.....|.+|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCS--SSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCC--CCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            455566666663  3666666666666666666666666664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=7.3e-11  Score=93.70  Aligned_cols=63  Identities=22%  Similarity=0.344  Sum_probs=31.0

Q ss_pred             HHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          334 TRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       334 ~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      ..|+++|.++++|.|..|++.|. ...|..|+ .|.++++|.|..|++.|.+ ..|..|+++|.++
T Consensus         6 ~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             SCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTB
T ss_pred             HhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCC
Confidence            34444444555555555555552 44455555 4555555555555554442 4455555555443

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5.6e-10  Score=78.11  Aligned_cols=41  Identities=32%  Similarity=0.527  Sum_probs=24.5

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44555556666666666666666666666666666666554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5e-09  Score=73.75  Aligned_cols=45  Identities=31%  Similarity=0.624  Sum_probs=41.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      .+.++|.++++|.|.  .|++.|.+...|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            355778999999995  499999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=5.7e-09  Score=73.46  Aligned_cols=45  Identities=27%  Similarity=0.542  Sum_probs=41.0

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      .+.+.|.++++|.|.  .|++.|.+...|.+|+++|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345778999999995  599999999999999999999999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.76  E-value=1.5e-09  Score=75.59  Aligned_cols=26  Identities=35%  Similarity=0.482  Sum_probs=11.0

Q ss_pred             CCCccCChHHHHHHHHHhcCCCCccC
Q psy677          323 CDRRFSRSDELTRHIRIHTGQKPFQC  348 (451)
Q Consensus       323 Cgk~F~s~s~L~rH~r~HtgeKPf~C  348 (451)
                      |++.|.....|.+|+++|+++++|.|
T Consensus        16 C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A           16 CDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCeeCChHHHHHHHHhhCCCCCccC
Confidence            44444444444444444444444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.8e-09  Score=73.05  Aligned_cols=43  Identities=44%  Similarity=0.569  Sum_probs=41.0

Q ss_pred             HHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          337 IRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       337 ~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      +++|.++++|.|..|++.|.....|.+|+++|+++++|+|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678999999999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=7.5e-09  Score=72.48  Aligned_cols=42  Identities=33%  Similarity=0.689  Sum_probs=40.5

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCC
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCG  380 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~Cg  380 (451)
                      .|+++++|.|..|++.|..+..|.+|+++|+++++|.|..||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            588999999999999999999999999999999999999997

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.6e-09  Score=73.05  Aligned_cols=44  Identities=43%  Similarity=0.641  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCccCc--ccccccCCcchhhhhhhcccCCCceecCCC
Q psy677          336 HIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEKPFSCDVC  379 (451)
Q Consensus       336 H~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~C  379 (451)
                      |.++|+++++|.|.  .|++.|.....|.+|+++|++++||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678999999998  899999999999999999999999999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=5.4e-09  Score=74.47  Aligned_cols=44  Identities=25%  Similarity=0.502  Sum_probs=40.2

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccccc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMR  353 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K  353 (451)
                      ..+..+++|.|.+  |++.|.....|.+|+++|+++++|.|.+|+|
T Consensus         5 ~~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4567789999954  9999999999999999999999999999986

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.1e-09  Score=73.72  Aligned_cols=34  Identities=44%  Similarity=0.807  Sum_probs=13.2

Q ss_pred             CCCCccCcccccccCCcchhhhhhhcccCCCcee
Q psy677          342 GQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS  375 (451)
Q Consensus       342 geKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfk  375 (451)
                      ++++|.|..|++.|.....|.+|+++|++++||+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            3333333333333333333333333333333333

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=74.85  Aligned_cols=40  Identities=30%  Similarity=0.649  Sum_probs=20.5

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      .++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3444555555555555555555555555555555555444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.72  E-value=6.7e-09  Score=72.31  Aligned_cols=39  Identities=23%  Similarity=0.466  Sum_probs=24.1

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      ++|+++++|+|..|++.|.+...|.+|+++|+++++|+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            345566666666666666666666666666666666655

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9.7e-09  Score=72.11  Aligned_cols=44  Identities=39%  Similarity=0.677  Sum_probs=40.3

Q ss_pred             CCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccc
Q psy677          306 PSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRIC  351 (451)
Q Consensus       306 ~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C  351 (451)
                      +.+.|.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356788999999954  99999999999999999999999999988

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=7.3e-09  Score=69.13  Aligned_cols=37  Identities=43%  Similarity=0.697  Sum_probs=32.5

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      .|+++|+++++|+|..|++.|.+...|.+|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3788899999999999999999999999999988764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4.5e-09  Score=72.05  Aligned_cols=39  Identities=18%  Similarity=0.551  Sum_probs=36.9

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchH
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKE  404 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~  404 (451)
                      ++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578999999999999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=68.34  Aligned_cols=37  Identities=24%  Similarity=0.455  Sum_probs=32.7

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      +++|+++++|.|..|++.|.+...|.+|+++|+++++
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3678899999999999999999999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.7e-08  Score=82.61  Aligned_cols=60  Identities=22%  Similarity=0.428  Sum_probs=51.7

Q ss_pred             CCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          305 RPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       305 ~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      ....+|.++++|.|.+  |++.|.....|.+|+++|+++++|+|..|    .+...|..|.++|.|
T Consensus        15 ~~~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccc
Confidence            3356788999999954  99999999999999999999999999765    456778889999887

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.59  E-value=3.3e-08  Score=64.76  Aligned_cols=35  Identities=20%  Similarity=0.402  Sum_probs=30.3

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      +|+++++|.|..|++.|.+...|.+|+++|+++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47788999999999999999999999999988763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=3.1e-08  Score=67.17  Aligned_cols=36  Identities=22%  Similarity=0.547  Sum_probs=23.7

Q ss_pred             ccCCCceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          368 HTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       368 HtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |+++++|.|..|++.|.+...|..|+++|+++++|.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            456666777777777777666777776666666654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.55  E-value=2e-08  Score=75.88  Aligned_cols=56  Identities=13%  Similarity=0.430  Sum_probs=48.2

Q ss_pred             CCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhh
Q psy677          304 NRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTH  364 (451)
Q Consensus       304 ~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H  364 (451)
                      ..+.+.|.++++|.|.  .|++.|.....|.   ++|+++++|.|..|++.|....++..+
T Consensus         3 ~~h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhHHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            3456788999999995  5999999988886   789999999999999999988877654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.54  E-value=3.9e-08  Score=64.68  Aligned_cols=35  Identities=34%  Similarity=0.679  Sum_probs=28.7

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      +|+++++|+|.+|++.|.+...|.+|+++|+++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47788888888888888888888888888887653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.51  E-value=2.3e-08  Score=67.80  Aligned_cols=36  Identities=19%  Similarity=0.479  Sum_probs=19.3

Q ss_pred             cCCCCccCcccccccCCcchhhhhhhcccCCCceec
Q psy677          341 TGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSC  376 (451)
Q Consensus       341 tgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC  376 (451)
                      +++++|.|..|++.|.....|.+|+++|+++++|.|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            445555555555555555555555555555555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.1e-08  Score=64.67  Aligned_cols=35  Identities=17%  Similarity=0.420  Sum_probs=31.3

Q ss_pred             hcccCCCceecCCCCCccCCh-HHHHHHHHHHhCcc
Q psy677          366 RTHTGEKPFSCDVCGRKFARS-DEKKRHAKVHLKQR  400 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~-s~Lk~HlrtH~~er  400 (451)
                      ++|+++++|+|..|++.|.+. ..|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            568899999999999999999 99999999998764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=8.9e-08  Score=63.19  Aligned_cols=34  Identities=21%  Similarity=0.438  Sum_probs=30.9

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      +|+++++|+|..|++.|.+...|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5888999999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9e-08  Score=63.42  Aligned_cols=35  Identities=23%  Similarity=0.503  Sum_probs=30.7

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      +.|+++++|+|.+|++.|.+...|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35888999999999999999999999999998764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-07  Score=75.27  Aligned_cols=65  Identities=23%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCC
Q psy677          303 PNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       303 p~~~skt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      ...+..++..++++.|.+  |++.| ....|..|+ .|.++++|.|..|++.|. ...|..|+++|.+++
T Consensus         5 L~~H~~~~c~~r~~~C~~--C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQH--CDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSS--SCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcc--cChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            345667788999999955  99999 499999999 899999999999999987 588999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=7.9e-08  Score=64.59  Aligned_cols=35  Identities=17%  Similarity=0.249  Sum_probs=31.1

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHH-HHHHhCc
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRH-AKVHLKQ  399 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~H-lrtH~~e  399 (451)
                      +++|++++||+|..|++.|.+...|.+| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4678999999999999999999999999 8898764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.6e-07  Score=61.98  Aligned_cols=34  Identities=29%  Similarity=0.599  Sum_probs=30.4

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .|+++++|.|.+|++.|.+...|.+|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=8.7e-08  Score=63.50  Aligned_cols=35  Identities=26%  Similarity=0.554  Sum_probs=29.0

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      +.|+++++|+|.+|++.|.+...|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35778888899889999988888888988887754

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.5e-07  Score=65.48  Aligned_cols=34  Identities=18%  Similarity=0.281  Sum_probs=29.8

Q ss_pred             cccCCCceecCC--CCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .++++|||+|..  |+|.|.++..|++|+++|++++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            467899999986  9999999999999999998763

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.43  E-value=3.6e-08  Score=65.66  Aligned_cols=36  Identities=56%  Similarity=0.781  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccCC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      |+++|+++++|.|..|++.|.....|.+|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            455666666777777777777777777776666653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=1.8e-07  Score=62.72  Aligned_cols=35  Identities=29%  Similarity=0.561  Sum_probs=30.4

Q ss_pred             ccCCCceecC--CCCCccCChHHHHHHHHHHhCcccc
Q psy677          368 HTGEKPFSCD--VCGRKFARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       368 HtGeKPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er~~  402 (451)
                      |+++++|.|.  .|++.|.+...|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5788999998  5999999999999999999988876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=8.7e-08  Score=78.39  Aligned_cols=41  Identities=17%  Similarity=0.387  Sum_probs=24.5

Q ss_pred             hhcccCCCceecCCCCCccCChHHHHHHHHHHhCcccchHH
Q psy677          365 IRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKES  405 (451)
Q Consensus       365 ~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k~~  405 (451)
                      .++|+++++|+|.+|++.|.+...|.+|+++|+++++|+|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~   57 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK   57 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc
Confidence            34456666666666666666666666666666666655553

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.5e-08  Score=66.48  Aligned_cols=34  Identities=29%  Similarity=0.708  Sum_probs=17.1

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      .|.++++|.|..  |++.|.....|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCC
Confidence            344455555532  5555555555555555555443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=4e-07  Score=72.34  Aligned_cols=42  Identities=24%  Similarity=0.389  Sum_probs=30.6

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHH-HHhcCCCCccCcc
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHI-RIHTGQKPFQCRI  350 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~-r~HtgeKPf~C~~  350 (451)
                      ...++|||.|.++.|+++|.+..+|.+|+ ++|+++|||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            35667788886556888888888888886 5687788777754

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=1.2e-07  Score=67.41  Aligned_cols=41  Identities=24%  Similarity=0.455  Sum_probs=35.0

Q ss_pred             hhhhhhhcccCCCceecC--CCCCccCChHHHHHHHHHHhCcc
Q psy677          360 HLTTHIRTHTGEKPFSCD--VCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       360 ~Lk~H~rtHtGeKPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .+..|..+|+++++|+|.  .|++.|.+...|.+|+++|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344566779999999996  69999999999999999998874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.6e-07  Score=61.12  Aligned_cols=34  Identities=21%  Similarity=0.586  Sum_probs=30.0

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .|.++++|.|..|++.|.+...|.+|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678899999999999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.35  E-value=2.4e-07  Score=60.79  Aligned_cols=32  Identities=28%  Similarity=0.608  Sum_probs=22.4

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcccch
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK  403 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~k  403 (451)
                      |||.|..|++.|.+...|..|+++|+++++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777776653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.33  E-value=1e-07  Score=62.42  Aligned_cols=32  Identities=31%  Similarity=0.516  Sum_probs=15.6

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      .++++|.|.  .|++.|.....|.+|+++|++++
T Consensus         3 ~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            3 SGSSGYVCA--LCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCSEECS--SSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCeECC--CCcchhCCHHHHHHHHHHHcCCC
Confidence            344455552  25555555555555555554443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.33  E-value=1.2e-07  Score=62.36  Aligned_cols=33  Identities=33%  Similarity=0.875  Sum_probs=17.7

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCCC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      |+++++|.|..|++.|.....|.+|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            444555555555555555555555555555544

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.32  E-value=2e-07  Score=66.71  Aligned_cols=36  Identities=25%  Similarity=0.681  Sum_probs=27.7

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHH-HHhCcccc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAK-VHLKQRSK  402 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~Hlr-tH~~er~~  402 (451)
                      +|+++|||+|.+|+|.|.+...|.+|++ +|.++..-
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4788899999999999999999999998 88876543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.30  E-value=1.9e-07  Score=61.32  Aligned_cols=31  Identities=42%  Similarity=0.853  Sum_probs=16.8

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCcc
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQ  347 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~  347 (451)
                      +|.|.  .|++.|.....|..|+++|+++++|.
T Consensus         2 p~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACP--ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCC--CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            45553  25555555555555555555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=3.2e-07  Score=72.91  Aligned_cols=38  Identities=21%  Similarity=0.513  Sum_probs=24.5

Q ss_pred             hcCCCCccCcc--cccccCCcchhhhhh-hcccCCCceecC
Q psy677          340 HTGQKPFQCRI--CMRSFSRSDHLTTHI-RTHTGEKPFSCD  377 (451)
Q Consensus       340 HtgeKPf~C~~--C~K~F~~~s~Lk~H~-rtHtGeKPfkC~  377 (451)
                      ++++|||+|..  |+|+|.+..+|.+|+ ++|+++|||-|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            45666666654  666666666666665 466666666664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.28  E-value=5.9e-07  Score=60.18  Aligned_cols=34  Identities=21%  Similarity=0.576  Sum_probs=30.2

Q ss_pred             cccCCCceecCC--CCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .|+++++|.|.+  |++.|.+...|.+|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999985  9999999999999999998864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=7e-07  Score=59.71  Aligned_cols=36  Identities=28%  Similarity=0.662  Sum_probs=23.7

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCc
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPF  346 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf  346 (451)
                      .++++|.|.++.|++.|.....|.+|+++|+++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            456667774335777777777777777777766665

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.19  E-value=2.6e-07  Score=60.12  Aligned_cols=31  Identities=35%  Similarity=0.590  Sum_probs=26.1

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCCCce
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPF  374 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPf  374 (451)
                      ++|.|..|++.|.....|.+|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788888888888888888888888888876

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=2.7e-07  Score=61.47  Aligned_cols=33  Identities=36%  Similarity=0.716  Sum_probs=17.9

Q ss_pred             CCCCCCCccCCCCCCCCccCCh-HHHHHHHHHhcCC
Q psy677          309 TPVHERPYACPVENCDRRFSRS-DELTRHIRIHTGQ  343 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~-s~L~rH~r~Htge  343 (451)
                      +|.++++|.|.  .|++.|... ..|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCP--YCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECS--SSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECC--CCChhhccCHHHHHHHHHhcCCC
Confidence            34555555553  255555555 5555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=3.5e-07  Score=60.47  Aligned_cols=32  Identities=22%  Similarity=0.476  Sum_probs=15.5

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      |.++++|.|..|++.|.....|.+|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            34444455555555555555555555544443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=3.8e-07  Score=60.32  Aligned_cols=33  Identities=18%  Similarity=0.559  Sum_probs=18.8

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      .|.++++|.|..  |++.|.....|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            345556666633  666666666666666665543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=4.3e-07  Score=59.82  Aligned_cols=33  Identities=33%  Similarity=0.708  Sum_probs=20.9

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|.++++|.|..  |++.|.....|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            455666666633  666666666666666666654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=2.1e-06  Score=59.60  Aligned_cols=34  Identities=24%  Similarity=0.486  Sum_probs=23.6

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +.+++||.|.++.|++.|.++..|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4566777775445777777777777777777654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.3e-06  Score=54.42  Aligned_cols=30  Identities=40%  Similarity=0.874  Sum_probs=23.8

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      +++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            467888888888888888888888887653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.11  E-value=2e-06  Score=53.37  Aligned_cols=29  Identities=41%  Similarity=0.919  Sum_probs=23.9

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      ++|.|..|++.|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47888888888888888888888887753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=8.3e-07  Score=58.40  Aligned_cols=33  Identities=21%  Similarity=0.488  Sum_probs=20.9

Q ss_pred             CCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          309 TPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       309 t~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      .|.++++|.|.  .|++.|.....|.+|+++|+++
T Consensus         3 ~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCD--MCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCT--TTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecC--cCCCCcCchHHHHHHHHHhcCC
Confidence            35556666663  3666666666666666666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=2.1e-06  Score=66.96  Aligned_cols=34  Identities=18%  Similarity=0.433  Sum_probs=23.3

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .|.++|||+|..|+|.|.+...|.+|+++|++++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3566677777777777777777777777776643

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=2.4e-06  Score=52.88  Aligned_cols=29  Identities=34%  Similarity=0.855  Sum_probs=25.3

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      ++|.|..|++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57899999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.07  E-value=1.5e-06  Score=54.08  Aligned_cols=29  Identities=31%  Similarity=0.653  Sum_probs=20.6

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            46777777777777777777777776653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.06  E-value=2.4e-06  Score=52.79  Aligned_cols=29  Identities=31%  Similarity=0.657  Sum_probs=23.0

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57888888888888888888888887764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=9.2e-07  Score=58.40  Aligned_cols=32  Identities=28%  Similarity=0.652  Sum_probs=20.2

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +..+++|.|..  |++.|.....|.+|+++|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            45566666633  666666666666666666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=4e-07  Score=61.04  Aligned_cols=30  Identities=27%  Similarity=0.479  Sum_probs=14.5

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHH-HHHhc
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRH-IRIHT  341 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH-~r~Ht  341 (451)
                      |.++++|.|.  .|++.|.....|.+| ++.|+
T Consensus         4 H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCS--QCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSCEEECS--SSSCEEECHHHHHHHHHHHTC
T ss_pred             cCCCcCeECC--CCCcccCCHHHHHHHHHHHcc
Confidence            4444555552  255555555555555 44444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.05  E-value=9.3e-07  Score=63.18  Aligned_cols=33  Identities=27%  Similarity=0.654  Sum_probs=18.8

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhh-cccCCC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIR-THTGEK  372 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~r-tHtGeK  372 (451)
                      |+++|+|.|.+|++.|.....|.+|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            555566666666666666666666666 565543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.01  E-value=4.5e-06  Score=55.77  Aligned_cols=35  Identities=26%  Similarity=0.748  Sum_probs=24.0

Q ss_pred             CCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          310 PVHERPYACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       310 ~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      |.++++|.|.++.|++.|.....|.+|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45667777753357777777777777777777653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.01  E-value=3.8e-06  Score=52.24  Aligned_cols=29  Identities=28%  Similarity=0.495  Sum_probs=22.3

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46778888888888888888888877664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=3.1e-06  Score=52.18  Aligned_cols=27  Identities=33%  Similarity=0.691  Sum_probs=23.1

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478899999999999999999988874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.99  E-value=2.9e-06  Score=54.29  Aligned_cols=29  Identities=38%  Similarity=0.899  Sum_probs=19.1

Q ss_pred             CCceecC--CCCCccCChHHHHHHHHHHhCc
Q psy677          371 EKPFSCD--VCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       371 eKPfkC~--~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      ++||.|.  .|++.|.+...|.+|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3566666  6666666666666666666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.7e-07  Score=55.28  Aligned_cols=28  Identities=36%  Similarity=0.812  Sum_probs=18.5

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5666666666666666666666666654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.96  E-value=2.5e-07  Score=60.15  Aligned_cols=31  Identities=29%  Similarity=0.582  Sum_probs=29.3

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcccc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~  402 (451)
                      |||+|..|++.|.+...|.+|+++|++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=5e-07  Score=64.11  Aligned_cols=37  Identities=27%  Similarity=0.579  Sum_probs=26.3

Q ss_pred             HHHHhcCCCCccCc--ccccccCCcchhhhhhhcccCCC
Q psy677          336 HIRIHTGQKPFQCR--ICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       336 H~r~HtgeKPf~C~--~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      |...|+++++|.|.  .|++.|.....|.+|+++|+++|
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34457777777775  57777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.95  E-value=2.9e-06  Score=52.54  Aligned_cols=27  Identities=37%  Similarity=0.947  Sum_probs=20.9

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      +++|.|..|++.|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888877775

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.19  E-value=1.1e-06  Score=54.90  Aligned_cols=28  Identities=29%  Similarity=0.708  Sum_probs=17.8

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +||.|..|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566666666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.92  E-value=3.9e-06  Score=53.44  Aligned_cols=28  Identities=46%  Similarity=1.074  Sum_probs=18.7

Q ss_pred             CceecC--CCCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCD--VCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~--~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +||.|.  .|++.|.+...|.+|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            456665  6777777777777777666655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.91  E-value=2.6e-06  Score=52.81  Aligned_cols=27  Identities=19%  Similarity=0.479  Sum_probs=21.0

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      ++||+|..|++.|.+...|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888877763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.88  E-value=6.7e-06  Score=56.52  Aligned_cols=26  Identities=23%  Similarity=0.431  Sum_probs=19.4

Q ss_pred             ccCCCceecCCCCCccCChHHHHHHH
Q psy677          368 HTGEKPFSCDVCGRKFARSDEKKRHA  393 (451)
Q Consensus       368 HtGeKPfkC~~CgK~Fs~~s~Lk~Hl  393 (451)
                      +.|+|||+|..|+|.|.+..+|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.87  E-value=4.2e-06  Score=51.95  Aligned_cols=27  Identities=48%  Similarity=0.840  Sum_probs=14.8

Q ss_pred             CccCcccccccCCcchhhhhhhcccCC
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=4e-06  Score=52.10  Aligned_cols=28  Identities=36%  Similarity=0.825  Sum_probs=14.3

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      ++|.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCD--YCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCC--CCCcccCCHHHHHHHHHHhccC
Confidence            445553  2555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.82  E-value=5.4e-06  Score=51.32  Aligned_cols=27  Identities=41%  Similarity=0.909  Sum_probs=15.9

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|.|.  .|++.|.....|..|+++|+++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCE--VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECC--CCCcccCCHHHHHHHHHHhcCC
Confidence            45663  3666666666666666666544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.82  E-value=3e-06  Score=58.31  Aligned_cols=25  Identities=24%  Similarity=0.513  Sum_probs=14.4

Q ss_pred             CCCCCccCCCCCCCCccCChHHHHHHH
Q psy677          311 VHERPYACPVENCDRRFSRSDELTRHI  337 (451)
Q Consensus       311 ~~eKpy~C~~e~Cgk~F~s~s~L~rH~  337 (451)
                      .++|||.|  ..|+|.|.+.++|.+|+
T Consensus         4 ~gekp~~C--~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMC--LPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEE--TTTTEECSCHHHHHHHH
T ss_pred             CCccCeEC--CCCCCccCCHhHccCcC
Confidence            45556666  33666666666666665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.82  E-value=8.9e-06  Score=51.95  Aligned_cols=28  Identities=29%  Similarity=0.770  Sum_probs=13.2

Q ss_pred             CCccCc--ccccccCCcchhhhhhhcccCC
Q psy677          344 KPFQCR--ICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       344 KPf~C~--~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      ++|.|.  .|++.|.....|.+|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            344444  4444444444444444444443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.81  E-value=5.9e-06  Score=50.53  Aligned_cols=26  Identities=31%  Similarity=0.802  Sum_probs=16.3

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHhC
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ||+|..|++.|.+...|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45666666666666666666666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.80  E-value=6.8e-06  Score=51.04  Aligned_cols=27  Identities=30%  Similarity=0.656  Sum_probs=13.4

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|.|.  .|++.|.....|..|+++|+++
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQ--YCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCC--CCCCccCCHHHHHHHHHHHccC
Confidence            34552  2555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=6.5e-06  Score=50.70  Aligned_cols=27  Identities=33%  Similarity=0.913  Sum_probs=13.3

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|.|.  .|++.|.....|..|+++|+++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCP--HCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCS--SCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCC--CCCcccCCHHHHHHHHHHhccC
Confidence            44552  2555555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.98  E-value=3.2e-06  Score=52.79  Aligned_cols=28  Identities=46%  Similarity=1.004  Sum_probs=18.6

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCC
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566666777776666676676666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.98  E-value=3.2e-06  Score=52.81  Aligned_cols=28  Identities=46%  Similarity=0.950  Sum_probs=18.7

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCC
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      ++|.|..|++.|.....|.+|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4666666666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.76  E-value=6.3e-06  Score=51.54  Aligned_cols=27  Identities=37%  Similarity=0.817  Sum_probs=13.6

Q ss_pred             ceecCCCCCccCChHHHHHH-HHHHhCc
Q psy677          373 PFSCDVCGRKFARSDEKKRH-AKVHLKQ  399 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~H-lrtH~~e  399 (451)
                      +|.|..|++.|.+...|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 3444443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.76  E-value=9.2e-06  Score=51.63  Aligned_cols=29  Identities=55%  Similarity=1.102  Sum_probs=15.0

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|.|.+..|++.|.....|.+|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45553224555555555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.93  E-value=4.1e-06  Score=51.14  Aligned_cols=25  Identities=36%  Similarity=0.977  Sum_probs=17.0

Q ss_pred             CceecCCCCCccCChHHHHHHHHHH
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |||.|..|++.|.+...|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4566777777777777777776665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=6e-06  Score=50.98  Aligned_cols=28  Identities=43%  Similarity=1.036  Sum_probs=17.3

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      ++|.|.  .|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECT--TTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCC--CCCCccCChhHHHHHHHHhcCC
Confidence            356663  3666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.68  E-value=1.7e-05  Score=49.53  Aligned_cols=29  Identities=38%  Similarity=0.861  Sum_probs=19.1

Q ss_pred             CCccCcccccccCCcchhhhh-hhcccCCC
Q psy677          344 KPFQCRICMRSFSRSDHLTTH-IRTHTGEK  372 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H-~rtHtGeK  372 (451)
                      ++|.|..|++.|.....|.+| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            356677777777777777777 56666653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.68  E-value=1.1e-05  Score=49.87  Aligned_cols=26  Identities=38%  Similarity=0.934  Sum_probs=12.2

Q ss_pred             CCccCcccccccCCcchhhhhhhccc
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHT  369 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHt  369 (451)
                      ++|.|..|++.|.....|.+|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            34444444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.66  E-value=7.7e-05  Score=57.97  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=33.3

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCccccc
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMR  353 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K  353 (451)
                      ..+..+|+|.|.  .|++.|.....|.+|+++|++++ +.|.+|..
T Consensus         6 ~~~~~ekpy~C~--~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            6 SGLREAGILPCG--LCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CSCCCCCCCCCT--TTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCCccCcCCC--CCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            446778999994  59999999999999999998764 45555543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.66  E-value=3e-05  Score=59.77  Aligned_cols=59  Identities=20%  Similarity=0.314  Sum_probs=40.3

Q ss_pred             ccCCCCCCCCccCChHHHHHHHH-HhcCCCCccCcccccccCCcchhhhhhhcccCCCceecC--CCCCccCChHHHHHH
Q psy677          316 YACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCD--VCGRKFARSDEKKRH  392 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r-~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~--~CgK~Fs~~s~Lk~H  392 (451)
                      |.|.|..|++.|.+...|..|+. .|.+.+.-                      .....|.|.  .|++.+.....|.+|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~----------------------~~~~~~~C~W~~C~~~~~~~~~L~~H   59 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK----------------------HPMEPLACNWEDCDFLGDDTASIVNH   59 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC----------------------CSSCCEECCCSSCCCEESSHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC----------------------CCCCCCEeeCCCCcCCCCChHHHHhh
Confidence            57899999999999999999984 67765410                      011356664  566666666666666


Q ss_pred             HHHH
Q psy677          393 AKVH  396 (451)
Q Consensus       393 lrtH  396 (451)
                      +++.
T Consensus        60 ir~~   63 (64)
T 1zw8_A           60 INAQ   63 (64)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.62  E-value=1.8e-05  Score=48.22  Aligned_cols=25  Identities=36%  Similarity=0.841  Sum_probs=13.3

Q ss_pred             ccCcccccccCCcchhhhhhhcccC
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      |.|..|++.|.....|.+|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4555555555555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.58  E-value=1.5e-05  Score=48.97  Aligned_cols=25  Identities=32%  Similarity=0.849  Sum_probs=15.2

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHh
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      ++|.|.  .|++.|.....|..|+++|
T Consensus         2 k~~~C~--~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCS--LCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECS--SSSCEESSHHHHHHHHHHC
T ss_pred             cCccCC--CcChhhCCHHHHHHHHHHc
Confidence            456663  3666666666666666655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.57  E-value=1.3e-05  Score=49.58  Aligned_cols=25  Identities=24%  Similarity=0.735  Sum_probs=11.7

Q ss_pred             CCccCcccccccCCcchhhhhhhcc
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      ++|.|..|++.|.....|.+|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3444444444444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.50  E-value=3.5e-05  Score=47.52  Aligned_cols=27  Identities=33%  Similarity=0.735  Sum_probs=20.7

Q ss_pred             CceecC--CCCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCD--VCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~--~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ++|.|.  .|++.|.....|.+|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467788  888888888888888877753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.61  E-value=1.6e-05  Score=48.33  Aligned_cols=25  Identities=44%  Similarity=0.950  Sum_probs=15.1

Q ss_pred             CCccCcccccccCCcchhhhhhhcc
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      |+|.|..|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.14  E-value=9.3e-05  Score=45.50  Aligned_cols=27  Identities=48%  Similarity=0.946  Sum_probs=15.9

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      +|.|.++.|++.|.....|.+|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            456642246666666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.02  E-value=0.00063  Score=52.25  Aligned_cols=23  Identities=26%  Similarity=0.330  Sum_probs=15.8

Q ss_pred             CCCCccCChHHHHHHH-HHHhCcc
Q psy677          378 VCGRKFARSDEKKRHA-KVHLKQR  400 (451)
Q Consensus       378 ~CgK~Fs~~s~Lk~Hl-rtH~~er  400 (451)
                      .|++.|.....|..|+ +.|.+.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcc
Confidence            4777777777777776 4666554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.56  E-value=0.001  Score=57.94  Aligned_cols=78  Identities=18%  Similarity=0.363  Sum_probs=55.0

Q ss_pred             CCccCCCCCCCCccCChHHHHHHH--HHhcCC-CCccCccc------ccccCCcchhhhhhhcccCCCceecCCCCCccC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHI--RIHTGQ-KPFQCRIC------MRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFA  384 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~--r~Htge-KPf~C~~C------~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs  384 (451)
                      +++.|.+  |+..|.+...+..|.  +.|... +.|.+..+      ++.|..    ..+...+.+.+.|.|..|++.|.
T Consensus        31 ~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----CccccccCCCCCeEcCCCCCEeC
Confidence            4578966  999999999999999  567532 34444211      222321    12344566788899999999999


Q ss_pred             ChHHHHHHH--HHHh
Q psy677          385 RSDEKKRHA--KVHL  397 (451)
Q Consensus       385 ~~s~Lk~Hl--rtH~  397 (451)
                      ....|..|.  +.|.
T Consensus       105 s~~~~~~H~~gk~H~  119 (127)
T 1zu1_A          105 SPVVAESHYIGKTHI  119 (127)
T ss_dssp             SHHHHHHHHTSHHHH
T ss_pred             CHHHHHHHHCCHHHH
Confidence            999999998  4553

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.52  E-value=0.0024  Score=55.68  Aligned_cols=32  Identities=25%  Similarity=0.345  Sum_probs=28.0

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHH
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKV  395 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hlrt  395 (451)
                      +-..|+|+++|.|..|+|.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34568999999999999999999999999754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.90  E-value=0.027  Score=50.49  Aligned_cols=84  Identities=25%  Similarity=0.453  Sum_probs=59.7

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHH
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAK  394 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~Hlr  394 (451)
                      ...|+..+|+..+. ...|..|.. .-..++..|+.|+..+ .+..|..|....-..+.-.|..|+..|... .|..|..
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-~l~~H~~  157 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-DKEIHDQ  157 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-GHHHHHT
T ss_pred             ccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-HHHhHHH
Confidence            35576567887665 345677763 2344677899999888 566788898877788888999999888664 6789998


Q ss_pred             HHhCcccc
Q psy677          395 VHLKQRSK  402 (451)
Q Consensus       395 tH~~er~~  402 (451)
                      ++.++..+
T Consensus       158 ~~~~~~~~  165 (170)
T 3hcs_A          158 NCPLALEH  165 (170)
T ss_dssp             TCCC----
T ss_pred             hCcChhhh
Confidence            88887654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.80  E-value=0.01  Score=51.79  Aligned_cols=31  Identities=26%  Similarity=0.354  Sum_probs=19.0

Q ss_pred             CCCCCCCCccCCCCCCCCccCChHHHHHHHHHh
Q psy677          308 KTPVHERPYACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       308 kt~~~eKpy~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      ..++++++|.|..  |++.|.+...|..|+++.
T Consensus        43 ed~tGekpfyC~~--C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCLA--CARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEETT--TTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEccc--CcchhCCHHHHHHHHhhh
Confidence            3455666666633  666666666666666554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.10  E-value=0.12  Score=37.64  Aligned_cols=27  Identities=15%  Similarity=0.257  Sum_probs=18.3

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      -.|.|+.|++.|.....|++||+-.-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            456777777777777777777765443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.57  E-value=0.25  Score=35.95  Aligned_cols=23  Identities=22%  Similarity=0.569  Sum_probs=16.7

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHH
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIR  338 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r  338 (451)
                      .+|.|  +.|++.|.....|++||+
T Consensus        11 ~~~~C--PrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKIC--PRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCC--TTTCCCCSSHHHHHHHHH
T ss_pred             CceeC--CcccccccchHHHHhhhh
Confidence            45777  447777777777777776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	451
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	8e-14
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-12
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-12
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-12
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-12
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-12
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-11
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-11
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-11
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	1e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-10
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-10
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-10
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-10
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	2e-09
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	8e-07
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-09
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-09
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	7e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-08
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-08
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	9e-07
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	7e-04
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	2e-04
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	4e-04
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	3e-04
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	0.004
d2adra2	31	g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Sac	4e-04
d2adra2	31	g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Sac	0.003
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	0.004
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	0.004

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.9 bits (153), Expect = 8e-14
 Identities = 22/28 (78%), Positives = 27/28 (96%)

Query: 371 EKPFSCDVCGRKFARSDEKKRHAKVHLK 398
           EKPF+CD+CGRKFARSDE+KRH K+HL+
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIHLR 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.9 bits (101), Expect = 1e-06
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIH 340
           E+P+AC +  C R+F+RSDE  RH +IH
Sbjct: 1   EKPFACDI--CGRKFARSDERKRHTKIH 26

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (145), Expect = 1e-12
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 371
           IH+G+KP+ C  C ++FSRS  L  H R HTGE
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 368 HTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           H+GEKP+ C  CG+ F+RS    +H +VH
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
           E+PY C    C + FSRS  L +H R+HTG
Sbjct: 5   EKPYGCVE--CGKAFSRSSILVQHQRVHTG 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (144), Expect = 2e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 371
           R       ++ ++C  C +SFS S  L+ H RTHTGE
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (108), Expect = 1e-07
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
                   + + CD CG+ F+ S +  +H + H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (90), Expect = 4e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
            R Y C  + C + FS S +L++H R HTG
Sbjct: 10  RRRYKC--DECGKSFSHSSDLSKHRRTHTG 37

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-12
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH 368
           ++ Y C    C + F+   +  RH+ +H G +P+ C +C + F    HL  H++ H
Sbjct: 1   DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           K + C+ C +SF+       H+  H G +P+ C VCG+KF        H K+H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (144), Expect = 2e-12
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 341 TGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCDV 378
           +  KP+ C+ C + FSR DHL  HI+  HT E+P  C V
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRI 350
            +PY C    C + FSR D L  HI+ +HT ++P +C++
Sbjct: 3   GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 369 TGEKPFSCDVCGRKFARSDEKKRHAK 394
           +  KP+ C  CG+ F+R D    H K
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIK 26

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (140), Expect = 6e-12
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           R HTG+KP+ C  C ++F +   L  H + +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           RTHTGEKP++C  C + F +      H K +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           E+PYAC   +CD+ F +   L  H + +    
Sbjct: 6   EKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (134), Expect = 4e-11
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 338 RIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGE 371
           R H+G+KP++C IC   F++S  +  HI + HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
           RTH+GEKP+ C +C  +F +S   K H    
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 5e-05
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHI-RIHTG 342
           E+PY C +  C  RF++S  +  HI + HT 
Sbjct: 6   EKPYECYI--CHARFTQSGTMKMHILQKHTE 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.1 bits (133), Expect = 5e-11
 Identities = 20/35 (57%), Positives = 21/35 (60%)

Query: 336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 370
             R  TG KPFQC  C RSFSRSDHL  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (120), Expect = 3e-09
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL 397
             R  TG KPF C  C R F+RSD    H K H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
            +P+ C   +CDR FSRSD L  H + H  
Sbjct: 9   IKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (132), Expect = 7e-11
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 348
           ++CP   C + F+    L  H+++H+  + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (123), Expect = 1e-09
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 346 FQC--RICMRSFSRSDHLTTHIRTHTGEKPFSCD 377
           F C    C +SF+   HL  H++ H+  + + C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (131), Expect = 1e-10
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQ 343
           +RPY+C    CD+ F R+ +L RH + H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 344 KPFQCRI--CMRSFSRSDHLTTHIRTHTGE 371
           +P+ C    C ++F R+  L  H ++H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 371 EKPFSCDV--CGRKFARSDEKKRHAKVHLKQ 399
           ++P+SCD   C + F R+ +  RH K H ++
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 53.4 bits (129), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           + F C +C R+F+R +HL  H R+HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           R + C V  C R F+R + L RH R HT +K
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 372 KPFSCDVCGRKFARSDEKKRHAKVH 396
           + F C+VC R FAR +  KRH + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (125), Expect = 6e-10
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           RP+ C    C +RF+RSDEL RH R HTG+K
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (115), Expect = 1e-08
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 344 KPFQCRI--CMRSFSRSDHLTTHIRTHTGEK 372
           +PF C    C + F+RSD L  H RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (125), Expect = 6e-10
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 372
           K F C  C + F RSDHL+ HI+TH  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 4e-07
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           + +ACP   C +RF RSD L++HI+ H  +K
Sbjct: 1   KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 7e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 372 KPFSCDVCGRKFARSDEKKRHAKVH 396
           K F+C  C ++F RSD   +H K H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 2e-09
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHT 341
           RPY CP + C+++F++S  L  HI  H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (102), Expect = 8e-07
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 344 KPFQCRI--CMRSFSRSDHLTTHIRTHT 369
           +P+ C    C + F++S +L +HI TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)

Query: 372 KPFSCDV--CGRKFARSDEKKRHAKVH 396
           +P+ C    C +KFA+S   K H   H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.4 bits (121), Expect = 2e-09
 Identities = 26/29 (89%), Positives = 28/29 (96%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTG 342
           RPYACPVE+CDRRFSRS +LTRHIRIHTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 344 KPFQC--RICMRSFSRSDHLTTHIRTHTG 370
           +P+ C    C R FSRS  LT HIR HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (117), Expect = 7e-09
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ 343
           +P+ C  E C + +SR + L  H+R HTG+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 7e-08
 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)

Query: 344 KPFQC--RICMRSFSRSDHLTTHIRTHTGE 371
           KP +C    C +S+SR ++L TH+R+HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)

Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTG 370
           QKPFQCRICMR+FSRSDHLTTHIRTHTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
           ++P+ C +  C R FSRSD LT HIR HTG
Sbjct: 1   QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 371 EKPFSCDVCGRKFARSDEKKRHAKVH 396
           +KPF C +C R F+RSD    H + H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (114), Expect = 2e-08
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 371
            +G++PF CRIC+ +F+   +   H++ HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 5e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 368 HTGEKPFSCDVCGRKFARSDEKKRHAKVH 396
            +G++PF C +C   F       RH KVH
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 4e-05
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
           +RP+ C +  C   F+      RH+++HT 
Sbjct: 5   KRPFVCRI--CLSAFTTKANCARHLKVHTD 32

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (113), Expect = 3e-08
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 333 LTRHIRIHTGQKPFQCRICM--RSFSRSDHLTTHIRTHTGEK 372
           + ++++     K F+C      ++F R  ++ +HI+TH  ++
Sbjct: 7   IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (100), Expect = 2e-06
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQK 344
           ++ + C    C + F R   +  HI+ H   +
Sbjct: 16  DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (85), Expect = 2e-04
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 3/43 (6%)

Query: 360 HLTTHIRTHTGEKPFSCDVC--GRKFARSDEKKRHAKVHLKQR 400
            +  +++    +K F C      + F R    + H + HL+ R
Sbjct: 6   SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 6e-08
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ 343
           +P+ C  E C +RFS    L  H+RIHTG 
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 9e-07
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 344 KPFQC--RICMRSFSRSDHLTTHIRTHTGE 371
           KPFQC    C + FS   +L TH+R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (95), Expect = 7e-06
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 344 KPFQCRICMRSFSRSDHLTTHIRTHT 369
           KP++C  C ++FS++  L  H R HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 7e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 314 RPYACPVENCDRRFSRSDELTRHIRIHT 341
           +PY C    C + FS++  L  H RIHT
Sbjct: 1   KPYKC--LECGKAFSQNSGLINHQRIHT 26

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTG 370
           +KP+ C +C   F R D ++ H+R+H G
Sbjct: 1   EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 4e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHTG 342
           E+PY+CPV  C  RF R D ++ H+R H G
Sbjct: 1   EKPYSCPV--CGLRFKRKDRMSYHVRSHDG 28

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 3e-04
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 345 PFQCRICMRSFSRSDHLTTHIRTHTG 370
           P +C +C + FSR D L TH+R HTG
Sbjct: 1   PHKCEVCGKCFSRKDKLKTHMRCHTG 26

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.004
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 315 PYACPVENCDRRFSRSDELTRHIRIHTG 342
           P+ C V  C + FSR D+L  H+R HTG
Sbjct: 1   PHKCEV--CGKCFSRKDKLKTHMRCHTG 26

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.6 bits (82), Expect = 4e-04
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 373 PFSCDVCGRKFARSDEKKRHA-KVH 396
           P+ C +C R F R D   RHA K+H
Sbjct: 1   PYPCGLCNRAFTRRDLLIRHAQKIH 25

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 32.9 bits (75), Expect = 0.003
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 315 PYACPVENCDRRFSRSDELTRH-IRIHTG 342
           PY C +  C+R F+R D L RH  +IH+G
Sbjct: 1   PYPCGL--CNRAFTRRDLLIRHAQKIHSG 27

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (74), Expect = 0.004
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 343 QKPFQCRICMRSFSRSDHLTTHIRTHTGE 371
           ++PF+C+IC  +   S  LT H+R+HTG+
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSHTGD 29

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 313 ERPYACPVENCDRRFSRSDELTRHIRIHT 341
           ++P+ C    C +RF+  D L  H   H 
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	451
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.11
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.99
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.89
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.89
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.89
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.87
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.81
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.79
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.77
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.75
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.74
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.71
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.68
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.64
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.61
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.6
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.57
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.55
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.54
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.53
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.53
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.51
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.31
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.27
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.21
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.21
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.06
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.88
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.68
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.55
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.44
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.4
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.24
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.23
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.11
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.08
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.03
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.01
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.92
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.9
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.85
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.81
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.81
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.62
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.61
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.41
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.38
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.33
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.33
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.29
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.19
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.88
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.77
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.51
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.45
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.32
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.27
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.99
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.9
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.87
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.68
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.6
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.5
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.46
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.08
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.85
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.45
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.17
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.8
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.67
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.47
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.18
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.77
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.9
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	87.9
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	86.9
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.79
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	86.51
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	85.94
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	84.77
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.67
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.62
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	82.16
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.8
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	80.38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.6e-15  Score=111.82  Aligned_cols=53  Identities=34%  Similarity=0.822  Sum_probs=39.1

Q ss_pred             CCCccCcccccccCCcchhhhhhhcccCCCceecCCCCCccCChHHHHHHHHHH
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      ||+|.|. |++.|.....|.+|+++|+|++||.|.+||+.|.+...|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4677774 7777777777777777777777777777777777777777777665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=6.1e-14  Score=103.19  Aligned_cols=53  Identities=30%  Similarity=0.899  Sum_probs=51.4

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcccccccCCcchhhhhhhcc
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      ||+|.|  + ||+.|....+|.+|+++|++++||.|..|++.|.....|.+|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999  5 9999999999999999999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1e-11  Score=85.49  Aligned_cols=37  Identities=22%  Similarity=0.598  Sum_probs=34.5

Q ss_pred             hhhhcccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          363 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       363 ~H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +|+++|+++|||+|++|||.|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999886

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=5.6e-11  Score=81.29  Aligned_cols=35  Identities=46%  Similarity=0.762  Sum_probs=32.4

Q ss_pred             hhhcccCCCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          364 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       364 H~rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |.|+|+|||||+|.+|+|.|.++++|.+|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=79.39  Aligned_cols=35  Identities=37%  Similarity=0.681  Sum_probs=32.0

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |+|+|||||+|.+|+|.|.+...|.+|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999999999999999999999998763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=9.8e-11  Score=78.10  Aligned_cols=33  Identities=42%  Similarity=0.890  Sum_probs=29.9

Q ss_pred             cccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          367 THTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       367 tHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +|+|+|||+|.+|||.|.+...|.+|+|+|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1e-10  Score=80.91  Aligned_cols=34  Identities=50%  Similarity=1.103  Sum_probs=15.1

Q ss_pred             CCccCcccccccCCcchhhhhhh-cccCCCceecC
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCD  377 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~r-tHtGeKPfkC~  377 (451)
                      |||+|..|+|.|....+|++|++ +|+|+|||+|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            44444444444444444444432 34444444443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=3.6e-10  Score=76.27  Aligned_cols=33  Identities=33%  Similarity=0.709  Sum_probs=29.3

Q ss_pred             ccCCCceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          368 HTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       368 HtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |+|+|||+|.+|+|.|.++.+|++|+|+|+++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999998753

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=6.4e-11  Score=81.47  Aligned_cols=37  Identities=41%  Similarity=0.701  Sum_probs=24.7

Q ss_pred             HHHHHhcCCCCccCcccccccCCcchhhhhhhcccCC
Q psy677          335 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       335 rH~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      +|+++|+++|||+|..|+|+|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3556666666666666666666666666666666664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=5.3e-10  Score=75.93  Aligned_cols=34  Identities=38%  Similarity=0.770  Sum_probs=30.0

Q ss_pred             hcccCCCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          366 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       366 rtHtGeKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      |+|+|||||+|++|+|.|+++.+|++|++.|+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5899999999999999999999999998665543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=2.8e-10  Score=81.72  Aligned_cols=42  Identities=24%  Similarity=0.568  Sum_probs=37.2

Q ss_pred             cchhhhhhhcccCCCceecCC--CCCccCChHHHHHHHHHHhCcc
Q psy677          358 SDHLTTHIRTHTGEKPFSCDV--CGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       358 ~s~Lk~H~rtHtGeKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      +..|.+|++ |+|+|||+|.+  |+|.|.+.++|++|+++|+++|
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            346778885 99999999987  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=74.35  Aligned_cols=35  Identities=23%  Similarity=0.824  Sum_probs=31.3

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCCCccCcc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRI  350 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeKPf~C~~  350 (451)
                      |.|.+++|+++|.++.+|++|+++|+++|||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78988889999999999999999999999999873

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.5e-09  Score=69.63  Aligned_cols=28  Identities=43%  Similarity=0.915  Sum_probs=25.8

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ||||+|.+|+|.|.++++|.+|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.77  E-value=1.5e-09  Score=70.22  Aligned_cols=29  Identities=41%  Similarity=0.919  Sum_probs=22.2

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |||.|.+|+|.|.+.+.|++|+++|++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57777777777777777777777777765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=8.6e-10  Score=73.42  Aligned_cols=32  Identities=53%  Similarity=0.991  Sum_probs=20.4

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccCC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      |+++|||+|..|+++|..++.|.+|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            56666666666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.4e-09  Score=73.84  Aligned_cols=37  Identities=41%  Similarity=1.071  Sum_probs=33.4

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHH-HhcCCCCccCcc
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRI  350 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r-~HtgeKPf~C~~  350 (451)
                      .+|||.|  +.|++.|....+|++|++ +|+++|||+|++
T Consensus         2 ~~Kpy~C--~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccC--CCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999  559999999999999986 699999999974

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=9.3e-10  Score=75.08  Aligned_cols=35  Identities=57%  Similarity=0.822  Sum_probs=23.9

Q ss_pred             HHHHhcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          336 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       336 H~r~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      |.|+|+++|||+|..|+++|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45667777777777777777777777777776653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.1e-09  Score=68.67  Aligned_cols=29  Identities=38%  Similarity=0.824  Sum_probs=21.0

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |||.|.+|+|.|.+++.|.+|+|+|+++|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            56777777777777777777777777764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1.6e-09  Score=73.46  Aligned_cols=32  Identities=31%  Similarity=0.746  Sum_probs=17.1

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      +|+|+|||+|..|+++|..++.|.+|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.64  E-value=3.6e-09  Score=68.39  Aligned_cols=29  Identities=48%  Similarity=1.069  Sum_probs=16.3

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCCC
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      |||.|.+|+++|.+.++|++|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35555555555555555555555555553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=7.3e-10  Score=79.53  Aligned_cols=39  Identities=26%  Similarity=0.709  Sum_probs=26.4

Q ss_pred             HHHHHHHhcCCCCccCcc--cccccCCcchhhhhhhcccCCC
Q psy677          333 LTRHIRIHTGQKPFQCRI--CMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       333 L~rH~r~HtgeKPf~C~~--C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      |.+|++ |+++|||.|.+  |+++|.+.++|++|+++|+|+|
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            445553 67777777765  7777777777777777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=4.2e-09  Score=70.91  Aligned_cols=31  Identities=35%  Similarity=0.955  Sum_probs=15.5

Q ss_pred             hcCCCCccCcccccccCCcchhhhhhhcccC
Q psy677          340 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       340 HtgeKPf~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      |+|+|||+|.+|+|.|.++.+|++|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3445555555555555555555555555543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1e-08  Score=67.20  Aligned_cols=31  Identities=58%  Similarity=1.116  Sum_probs=25.6

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      |||.|++++|+++|.+.++|++|+++|+++|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5788888888888888888888888888775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=9.1e-09  Score=66.42  Aligned_cols=29  Identities=52%  Similarity=0.961  Sum_probs=17.4

Q ss_pred             CCccCcccccccCCcchhhhhhhcccCCC
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRTHTGEK  372 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rtHtGeK  372 (451)
                      |||.|.+|+|+|.++++|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            45666666666666666666666666554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.8e-08  Score=65.49  Aligned_cols=30  Identities=47%  Similarity=1.012  Sum_probs=26.8

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      |||.|.+++|+++|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            689998889999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=6.2e-09  Score=70.53  Aligned_cols=32  Identities=31%  Similarity=0.835  Sum_probs=20.3

Q ss_pred             ccCcc--cccccCCcchhhhhhhcccCCCceecC
Q psy677          346 FQCRI--CMRSFSRSDHLTTHIRTHTGEKPFSCD  377 (451)
Q Consensus       346 f~C~~--C~K~F~~~s~Lk~H~rtHtGeKPfkC~  377 (451)
                      |.|+.  |+++|.++.+|++|+++|+|+|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            55654  666666666666666666666666664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.5e-08  Score=64.81  Aligned_cols=30  Identities=40%  Similarity=0.922  Sum_probs=25.2

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      |||.|.+++|+++|.+.++|++|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            578888888888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=5.3e-09  Score=70.86  Aligned_cols=28  Identities=39%  Similarity=0.928  Sum_probs=13.3

Q ss_pred             HhcCCCCccCcccccccCCcchhhhhhh
Q psy677          339 IHTGQKPFQCRICMRSFSRSDHLTTHIR  366 (451)
Q Consensus       339 ~HtgeKPf~C~~C~K~F~~~s~Lk~H~r  366 (451)
                      +|+|+|||+|+.|++.|.++.+|++|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            3444444444444444444444444443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=6.8e-09  Score=66.51  Aligned_cols=28  Identities=61%  Similarity=1.198  Sum_probs=17.0

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTG  342 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htg  342 (451)
                      ||||.|..  |+++|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            45666633  66666666666666666654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.8e-08  Score=62.39  Aligned_cols=26  Identities=31%  Similarity=0.828  Sum_probs=24.2

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHh
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |||+|.+|||.|.+.+.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999995

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5e-08  Score=63.37  Aligned_cols=28  Identities=32%  Similarity=0.865  Sum_probs=24.5

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      |||+|++  |+|+|.+.++|++|+|+|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6889977  999999999999999999875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=4.9e-08  Score=63.37  Aligned_cols=28  Identities=29%  Similarity=0.724  Sum_probs=22.2

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      |||+|.+  |+|+|.+.++|++|+|+|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888775

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.35  E-value=1.3e-07  Score=62.22  Aligned_cols=30  Identities=40%  Similarity=0.929  Sum_probs=25.2

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTG  342 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htg  342 (451)
                      ||||.|.+++|++.|.+.++|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            578888888888888888888888888864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=9.8e-08  Score=61.45  Aligned_cols=29  Identities=90%  Similarity=1.590  Sum_probs=25.7

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTG  342 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htg  342 (451)
                      |||.|.+++|+|+|.+.++|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            68999988999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=9.7e-08  Score=62.40  Aligned_cols=29  Identities=45%  Similarity=1.068  Sum_probs=18.1

Q ss_pred             CceecC--CCCCccCChHHHHHHHHHHhCcc
Q psy677          372 KPFSCD--VCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       372 KPfkC~--~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |||+|+  .|+|.|++.++|++|+++|+++|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466664  36666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.2e-07  Score=60.51  Aligned_cols=28  Identities=43%  Similarity=1.094  Sum_probs=23.5

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      |||.|.+++|+|+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788888888888888888888888885

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=1.7e-07  Score=58.54  Aligned_cols=27  Identities=81%  Similarity=1.552  Sum_probs=24.5

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      ||||.|++||+.|++.+..++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999886

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=3.1e-07  Score=59.06  Aligned_cols=27  Identities=41%  Similarity=1.041  Sum_probs=23.0

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |||+|.+  |+|.|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6888877  88888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.21  E-value=2.6e-07  Score=60.76  Aligned_cols=28  Identities=39%  Similarity=0.929  Sum_probs=20.1

Q ss_pred             CCceecCC--CCCccCChHHHHHHHHHHhC
Q psy677          371 EKPFSCDV--CGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       371 eKPfkC~~--CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ||||.|.+  |+|.|.+.++|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            56777766  77777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=4.5e-07  Score=54.99  Aligned_cols=26  Identities=42%  Similarity=0.954  Sum_probs=16.4

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHhC
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |++|+.|+|.|++++.|+.|+|.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45666666666666666666666653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=6e-07  Score=57.20  Aligned_cols=26  Identities=38%  Similarity=0.844  Sum_probs=17.9

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHh
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |||+|+.  |+|.|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5677765  7777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.7e-06  Score=52.41  Aligned_cols=25  Identities=52%  Similarity=1.077  Sum_probs=13.5

Q ss_pred             ccCcccccccCCcchhhhhhhcccC
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTHTG  370 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtHtG  370 (451)
                      ++|++|+|.|.+++.|+.|+|.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4555555555555555555555543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=3.1e-06  Score=52.86  Aligned_cols=26  Identities=46%  Similarity=0.990  Sum_probs=16.5

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      |||.|  .+|||.|...+.|..|.|+|+
T Consensus         1 KPy~C--~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKC--LECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEEC--SSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccC--CCCcCeeccCcccccCccCCC
Confidence            46666  446666666666666666663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=4.8e-06  Score=51.83  Aligned_cols=27  Identities=48%  Similarity=0.954  Sum_probs=18.0

Q ss_pred             CCCccCcccccccCCcchhhhhhhccc
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHT  369 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHt  369 (451)
                      +|||.|.+|++.|.+.+..++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            466667777777777666666666663

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=9.7e-06  Score=52.37  Aligned_cols=29  Identities=41%  Similarity=0.856  Sum_probs=14.2

Q ss_pred             ccCcccccccCCcchhhhhhhcccCCCce
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTHTGEKPF  374 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtHtGeKPf  374 (451)
                      ..|+.|||.|....+|.+|...|.|||||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34444555555444455554445555444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=3.4e-05  Score=48.74  Aligned_cols=28  Identities=46%  Similarity=0.911  Sum_probs=22.8

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ||||.|++|..+|.+++.+..|.|.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            5788888888888888888888888865

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.5e-05  Score=47.97  Aligned_cols=29  Identities=28%  Similarity=0.909  Sum_probs=25.7

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTG  342 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htg  342 (451)
                      |||.|.+.+|+|++...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            68999999999999999999999997654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=4.1e-05  Score=49.36  Aligned_cols=31  Identities=26%  Similarity=0.584  Sum_probs=29.2

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhCcccc
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLKQRSK  402 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~~  402 (451)
                      |...|+.|||.|+....|++|.-.|.++++|
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5678999999999999999999999999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=9.8e-05  Score=50.08  Aligned_cols=28  Identities=36%  Similarity=0.857  Sum_probs=25.2

Q ss_pred             cCCCceecCCCCCccCChHHHHHHHHHH
Q psy677          369 TGEKPFSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       369 tGeKPfkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      +|.|||.|..|+|.|-+++.+.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            5789999999999999999999997544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=9.4e-05  Score=45.68  Aligned_cols=28  Identities=29%  Similarity=0.615  Sum_probs=16.0

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhC
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      ++||+|..|...-+..+.|..|+|.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3555665555555555556666555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00014  Score=45.87  Aligned_cols=29  Identities=52%  Similarity=1.190  Sum_probs=20.4

Q ss_pred             CCCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          313 ERPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       313 eKpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      +|||.|++  |..+|+++..+.-|.|.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            46777765  777777777777777777653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00019  Score=44.40  Aligned_cols=27  Identities=26%  Similarity=0.655  Sum_probs=21.2

Q ss_pred             eecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      |.|..||......+-|++|+|.|+++|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888887764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=9.1e-05  Score=45.76  Aligned_cols=29  Identities=45%  Similarity=0.992  Sum_probs=20.1

Q ss_pred             CCCccCcccccccCCcchhhhhhhcccCC
Q psy677          343 QKPFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       343 eKPf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      ++||+|..|...-...+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46777777777767777777777777663

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.01  E-value=0.00021  Score=44.25  Aligned_cols=28  Identities=50%  Similarity=1.079  Sum_probs=25.5

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      .||.|+.++|+++|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4799999999999999999999999883

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.0002  Score=44.55  Aligned_cols=30  Identities=40%  Similarity=0.899  Sum_probs=26.3

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      |||.|..++|.|.|..-..|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            578899999999999999999999988875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.00033  Score=42.40  Aligned_cols=26  Identities=27%  Similarity=0.526  Sum_probs=17.7

Q ss_pred             ecCCCCCccCChHHHHHHHHHHhCcc
Q psy677          375 SCDVCGRKFARSDEKKRHAKVHLKQR  400 (451)
Q Consensus       375 kC~~CgK~Fs~~s~Lk~HlrtH~~er  400 (451)
                      .|+.|.|.|..+..|+.|-|.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46667777777777777777776654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00014  Score=44.63  Aligned_cols=21  Identities=48%  Similarity=0.952  Sum_probs=8.1

Q ss_pred             cCCCCCccCChHHHHHHHHHH
Q psy677          376 CDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       376 C~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |..|||.|...+.|++|.-+|
T Consensus         5 c~ecgkaf~essklkrh~lvh   25 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVH   25 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGT
T ss_pred             HHHHhHHHHHHHHHHHHhhcc
Confidence            333333333333333333333

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0002  Score=43.95  Aligned_cols=27  Identities=37%  Similarity=0.627  Sum_probs=25.1

Q ss_pred             CccCcccccccCCcchhhhhhhcccCC
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      -+.|..|+|+|...+.|++|..+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00041  Score=42.46  Aligned_cols=27  Identities=30%  Similarity=0.668  Sum_probs=23.2

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHh
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      .|||+|..|...-...+.|++|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            378999999988888999999999885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.00017  Score=43.75  Aligned_cols=25  Identities=40%  Similarity=0.737  Sum_probs=13.6

Q ss_pred             cCcccccccCCcchhhhhhhcccCC
Q psy677          347 QCRICMRSFSRSDHLTTHIRTHTGE  371 (451)
Q Consensus       347 ~C~~C~K~F~~~s~Lk~H~rtHtGe  371 (451)
                      .|+.|.|.|..+..|+.|-|.|+||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00061  Score=44.34  Aligned_cols=30  Identities=33%  Similarity=0.690  Sum_probs=24.8

Q ss_pred             CCccCCCCCCCC---ccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDR---RFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk---~F~s~s~L~rH~r~Htge  343 (451)
                      |.|.|.|.+|.+   .|+....|..|||.|+||
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            358899999954   588889999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.61  E-value=0.0007  Score=41.80  Aligned_cols=26  Identities=38%  Similarity=0.859  Sum_probs=22.3

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHh
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      .||+|..  |+|.|+..+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4788965  9999999999999999883

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00076  Score=42.26  Aligned_cols=27  Identities=22%  Similarity=0.724  Sum_probs=19.1

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |||.|.+  |+|++...++|++|++.+++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5677765  77777777777777776543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00041  Score=43.96  Aligned_cols=28  Identities=36%  Similarity=0.893  Sum_probs=21.1

Q ss_pred             CCccCCCCCCCCccCChHHHHHHH-HHhc
Q psy677          314 RPYACPVENCDRRFSRSDELTRHI-RIHT  341 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~-r~Ht  341 (451)
                      |||.|.+++|.|.|...++...|. |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            577888888888888877777775 6664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0014  Score=40.48  Aligned_cols=27  Identities=37%  Similarity=0.776  Sum_probs=19.8

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      |.|.  .|+......+-|+.|+|.|++++
T Consensus         2 YvC~--~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICE--ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             cccc--ccCcccCCHHHHHHHHHHhcCCC
Confidence            6774  48877777788888888877654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.33  E-value=0.00065  Score=43.01  Aligned_cols=26  Identities=46%  Similarity=0.957  Sum_probs=18.6

Q ss_pred             ceecCCCCCccCChHHHHHHH-HHHhC
Q psy677          373 PFSCDVCGRKFARSDEKKRHA-KVHLK  398 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hl-rtH~~  398 (451)
                      ||.|.+|++.|++++-|.+|. +.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            677777888888887777776 44543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0012  Score=43.89  Aligned_cols=30  Identities=30%  Similarity=0.796  Sum_probs=27.6

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      .+|||.|..++|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            379999999999999999999999999885

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.29  E-value=0.0011  Score=44.28  Aligned_cols=31  Identities=26%  Similarity=0.692  Sum_probs=26.3

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhCccc
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLKQRS  401 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~er~  401 (451)
                      .+.|+|.+|+|.|.....|--|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3568999999999999999999999977664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.19  E-value=0.00087  Score=39.96  Aligned_cols=23  Identities=35%  Similarity=0.910  Sum_probs=13.2

Q ss_pred             eecCCCCCccCChHHHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |+|..|.+.|.-++.|.+|.|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555555

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.001  Score=42.04  Aligned_cols=27  Identities=26%  Similarity=0.886  Sum_probs=16.8

Q ss_pred             CceecCC--CCCccCChHHHHHHH-HHHhC
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHA-KVHLK  398 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~Hl-rtH~~  398 (451)
                      |||.|.+  |.|+|+..+...+|. |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4666655  666666666666665 56543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.77  E-value=0.0018  Score=38.54  Aligned_cols=23  Identities=39%  Similarity=0.907  Sum_probs=14.7

Q ss_pred             ccCcccccccCCcchhhhhhhcc
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      |+|..|.+.|..++.|.+|.|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.51  E-value=0.0045  Score=41.15  Aligned_cols=29  Identities=31%  Similarity=0.843  Sum_probs=24.1

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQK  344 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~HtgeK  344 (451)
                      +.|.|.+  |++.|.+...|-.||+.|..++
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcchH
Confidence            5688965  9999999999999999987654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.45  E-value=0.005  Score=38.10  Aligned_cols=27  Identities=33%  Similarity=0.716  Sum_probs=15.2

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      |||.|..  |.|.|.....|.+|.-+|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            3555533  66666666666666655554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0065  Score=40.29  Aligned_cols=28  Identities=36%  Similarity=0.778  Sum_probs=22.9

Q ss_pred             CCCceecC--CCCCccCChHHHHHHHHHHh
Q psy677          370 GEKPFSCD--VCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       370 GeKPfkC~--~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      .+|||.|.  -|+.+|...+.|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47888884  48899999888888888774

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0022  Score=39.14  Aligned_cols=25  Identities=44%  Similarity=0.999  Sum_probs=13.0

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHh
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      |||+|.  .|...-...+.|+.|+|+|
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHS
T ss_pred             CCcccc--cccchhcchhhHhhhhhcc
Confidence            455552  2555555555555555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0077  Score=37.20  Aligned_cols=27  Identities=22%  Similarity=0.548  Sum_probs=21.9

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHhC
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      +||+|+.|...-.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            588999998888888999999865544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0074  Score=37.38  Aligned_cols=26  Identities=31%  Similarity=0.526  Sum_probs=17.3

Q ss_pred             CceecCCCCCccCChHHHHHHHHHHh
Q psy677          372 KPFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       372 KPfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |||.|..|..+.+..++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46777777777677777777766533

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.04  E-value=0.011  Score=36.46  Aligned_cols=29  Identities=34%  Similarity=0.644  Sum_probs=20.4

Q ss_pred             CCceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          371 EKPFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       371 eKPfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +..|.|..|...|.++-.|+.||-.|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577777777777777777777777664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.0043  Score=38.45  Aligned_cols=24  Identities=42%  Similarity=0.739  Sum_probs=13.6

Q ss_pred             CCccCcccccccCCcchhhhhhhc
Q psy677          344 KPFQCRICMRSFSRSDHLTTHIRT  367 (451)
Q Consensus       344 KPf~C~~C~K~F~~~s~Lk~H~rt  367 (451)
                      |||.|..|..+....++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            355555555555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.90  E-value=0.0065  Score=36.10  Aligned_cols=21  Identities=24%  Similarity=0.861  Sum_probs=18.2

Q ss_pred             ceecCCCCCccCChHHHHHHH
Q psy677          373 PFSCDVCGRKFARSDEKKRHA  393 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hl  393 (451)
                      ||+|..|...|-++..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            788888888888888888887

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.87  E-value=0.011  Score=36.41  Aligned_cols=28  Identities=39%  Similarity=0.813  Sum_probs=19.7

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      ..|.|.+  |...|+++-.|..||-.|+|+
T Consensus         3 qvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            4567755  777777777777777777664

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.68  E-value=0.012  Score=35.72  Aligned_cols=22  Identities=32%  Similarity=0.832  Sum_probs=19.0

Q ss_pred             ceecCCCCCccCChHHHHHHHH
Q psy677          373 PFSCDVCGRKFARSDEKKRHAK  394 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hlr  394 (451)
                      ||+|..|||.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6889999999999999988864

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.60  E-value=0.011  Score=35.78  Aligned_cols=26  Identities=38%  Similarity=0.804  Sum_probs=24.0

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHHhc
Q psy677          316 YACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      |.|.+++|+|.|+....|+.|.-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            78999999999999999999998885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.50  E-value=0.012  Score=36.82  Aligned_cols=30  Identities=27%  Similarity=0.730  Sum_probs=27.4

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHhcCC
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIHTGQ  343 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~Htge  343 (451)
                      |.|.|.+.+|+..|.....|..|.-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            569999999999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.012  Score=36.22  Aligned_cols=23  Identities=26%  Similarity=0.687  Sum_probs=20.5

Q ss_pred             ceecCCCCCccCChHHHHHHHHH
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKV  395 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hlrt  395 (451)
                      ||.|..|+..|..+.+|.+||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68999999999999999999864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.08  E-value=0.0069  Score=38.18  Aligned_cols=26  Identities=42%  Similarity=1.026  Sum_probs=19.1

Q ss_pred             CccCcccccccCCcchhhhhhh-cccC
Q psy677          345 PFQCRICMRSFSRSDHLTTHIR-THTG  370 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~r-tHtG  370 (451)
                      ||.|.+|++.|.+++.|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6778888888888888888865 3444

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.018  Score=37.13  Aligned_cols=27  Identities=33%  Similarity=0.710  Sum_probs=23.2

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHhCc
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      .|.|..|+|.|.++..+.+|....++.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            489999999999999999998777653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.45  E-value=0.02  Score=35.20  Aligned_cols=23  Identities=35%  Similarity=0.894  Sum_probs=16.5

Q ss_pred             CccCCCCCCCCccCChHHHHHHHHH
Q psy677          315 PYACPVENCDRRFSRSDELTRHIRI  339 (451)
Q Consensus       315 py~C~~e~Cgk~F~s~s~L~rH~r~  339 (451)
                      ||.|.  .|+..|+.+.+|..||+.
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhh
Confidence            56774  477777777777777764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.17  E-value=0.033  Score=37.39  Aligned_cols=25  Identities=36%  Similarity=0.937  Sum_probs=19.0

Q ss_pred             CCCCccCCCCCCCCccCChHHHHHHHH
Q psy677          312 HERPYACPVENCDRRFSRSDELTRHIR  338 (451)
Q Consensus       312 ~eKpy~C~~e~Cgk~F~s~s~L~rH~r  338 (451)
                      +-|||.|.+  |+|+|..+..+.+|+.
T Consensus         2 GiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCceeccc--hhhhhhhHHHHHHhhh
Confidence            457888854  8888888888888864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.80  E-value=0.066  Score=32.53  Aligned_cols=25  Identities=20%  Similarity=0.514  Sum_probs=15.1

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHh
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |-+|..|......+..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3456666666666666666666653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.67  E-value=0.04  Score=33.31  Aligned_cols=22  Identities=32%  Similarity=0.786  Sum_probs=16.7

Q ss_pred             CccCcccccccCCcchhhhhhh
Q psy677          345 PFQCRICMRSFSRSDHLTTHIR  366 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~r  366 (451)
                      ||+|..|+|.|.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5778888888888877777754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.47  E-value=0.12  Score=30.60  Aligned_cols=23  Identities=30%  Similarity=0.767  Sum_probs=18.5

Q ss_pred             eecCCCCCccCChHHHHHHHHHH
Q psy677          374 FSCDVCGRKFARSDEKKRHAKVH  396 (451)
Q Consensus       374 fkC~~CgK~Fs~~s~Lk~HlrtH  396 (451)
                      |.|+.|=|.|.+++++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            67888888888888888887653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.13  Score=31.49  Aligned_cols=23  Identities=30%  Similarity=0.631  Sum_probs=20.7

Q ss_pred             cCCCCCCCCccCChHHHHHHHHH
Q psy677          317 ACPVENCDRRFSRSDELTRHIRI  339 (451)
Q Consensus       317 ~C~~e~Cgk~F~s~s~L~rH~r~  339 (451)
                      .|.+++|++.|+++..|..|++.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            48889999999999999999875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.77  E-value=0.13  Score=31.55  Aligned_cols=25  Identities=24%  Similarity=0.712  Sum_probs=17.1

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHHh
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRIH  340 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~H  340 (451)
                      +||+|.+  |..-.+..++|..|++.-
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHHH
Confidence            4677744  777777777777777653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.13  Score=31.30  Aligned_cols=25  Identities=28%  Similarity=0.806  Sum_probs=21.4

Q ss_pred             cCCCCCCCCccCChHHHHHHHHHhc
Q psy677          317 ACPVENCDRRFSRSDELTRHIRIHT  341 (451)
Q Consensus       317 ~C~~e~Cgk~F~s~s~L~rH~r~Ht  341 (451)
                      .|+-.+|+|.|++.+.++.|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4777889999999999999998873

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.90  E-value=0.089  Score=31.92  Aligned_cols=23  Identities=35%  Similarity=0.486  Sum_probs=13.6

Q ss_pred             ccCcccccccCCcchhhhhhhcc
Q psy677          346 FQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      -+|..|......+..|+.|.|+|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45555665556666666666655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.12  E-value=0.077  Score=31.34  Aligned_cols=21  Identities=29%  Similarity=0.914  Sum_probs=13.9

Q ss_pred             CccCcccccccCCcchhhhhh
Q psy677          345 PFQCRICMRSFSRSDHLTTHI  365 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~  365 (451)
                      ||+|..|...|..+.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=0.22  Score=34.44  Aligned_cols=26  Identities=23%  Similarity=0.634  Sum_probs=22.0

Q ss_pred             ceecCCCCCccCChHHHHHHHHHHhC
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKVHLK  398 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~HlrtH~~  398 (451)
                      .|.|-.|+|.|.....|+.|...|..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999887753

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.79  E-value=0.29  Score=29.37  Aligned_cols=24  Identities=29%  Similarity=0.729  Sum_probs=19.5

Q ss_pred             eecC--CCCCccCChHHHHHHHHHHh
Q psy677          374 FSCD--VCGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       374 fkC~--~CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |.|.  .|+|.|.....|+.|.-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5564  49999999999999988875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.51  E-value=0.21  Score=32.01  Aligned_cols=19  Identities=21%  Similarity=0.195  Sum_probs=12.7

Q ss_pred             CccCChHHHHHHHHHHhCc
Q psy677          381 RKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       381 K~Fs~~s~Lk~HlrtH~~e  399 (451)
                      +.|..+..|..|+|+|++|
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4566677777777777664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.94  E-value=0.26  Score=29.76  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=20.1

Q ss_pred             ceecCCCCCccCChHHHHHHHHH
Q psy677          373 PFSCDVCGRKFARSDEKKRHAKV  395 (451)
Q Consensus       373 PfkC~~CgK~Fs~~s~Lk~Hlrt  395 (451)
                      .|.|+.|+...++++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            47899999999999999999864

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.77  E-value=0.12  Score=33.18  Aligned_cols=21  Identities=29%  Similarity=0.792  Sum_probs=10.4

Q ss_pred             ccCcccccccCCcchhhhhhh
Q psy677          346 FQCRICMRSFSRSDHLTTHIR  366 (451)
Q Consensus       346 f~C~~C~K~F~~~s~Lk~H~r  366 (451)
                      |.|..|+|.|.++..+.+|..
T Consensus         5 fvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhh
Confidence            445555555555555444443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.67  E-value=0.12  Score=35.73  Aligned_cols=24  Identities=25%  Similarity=0.650  Sum_probs=16.8

Q ss_pred             CccCcccccccCCcchhhhhhhcc
Q psy677          345 PFQCRICMRSFSRSDHLTTHIRTH  368 (451)
Q Consensus       345 Pf~C~~C~K~F~~~s~Lk~H~rtH  368 (451)
                      -|.|..|+|.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            466777777777777777776665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.62  E-value=0.57  Score=29.03  Aligned_cols=28  Identities=21%  Similarity=0.554  Sum_probs=20.2

Q ss_pred             CceecCC--CCCccCChHHHHHHHHHHhCc
Q psy677          372 KPFSCDV--CGRKFARSDEKKRHAKVHLKQ  399 (451)
Q Consensus       372 KPfkC~~--CgK~Fs~~s~Lk~HlrtH~~e  399 (451)
                      |.|.|..  |+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4566753  777788777788887777764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.16  E-value=0.52  Score=27.74  Aligned_cols=22  Identities=45%  Similarity=1.162  Sum_probs=16.7

Q ss_pred             ccCCCCCCCCccCChHHHHHHHHH
Q psy677          316 YACPVENCDRRFSRSDELTRHIRI  339 (451)
Q Consensus       316 y~C~~e~Cgk~F~s~s~L~rH~r~  339 (451)
                      |.|++  |-+.|.++.++..|.++
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            56765  88888888888888765

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.80  E-value=0.75  Score=28.09  Aligned_cols=26  Identities=23%  Similarity=0.751  Sum_probs=22.2

Q ss_pred             CCccCCCCCCCCccCChHHHHHHHHH
Q psy677          314 RPYACPVENCDRRFSRSDELTRHIRI  339 (451)
Q Consensus       314 Kpy~C~~e~Cgk~F~s~s~L~rH~r~  339 (451)
                      |.|.|.-+.|..+|..+.+++.|...
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhh
Confidence            35889888999999999999999765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.38  E-value=0.39  Score=29.09  Aligned_cols=19  Identities=21%  Similarity=0.530  Sum_probs=16.1

Q ss_pred             CCCccCChHHHHHHHHHHh
Q psy677          379 CGRKFARSDEKKRHAKVHL  397 (451)
Q Consensus       379 CgK~Fs~~s~Lk~HlrtH~  397 (451)
                      |+|.|+..+.+++|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            8899999999999987773