Psyllid ID: psy6828

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
Protein Sequence
MSLPVNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVVA
Secondary Structure (PSIPRED)
ccccEEEHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEccccccccccccEEccEEEEEccEEEEEEEccccEEEEHHcHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccccEEcccccEEEcccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHcHHHHHHHcccHHHHHHHHccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEcccccccccccccccccEEEEEEEccEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccccccccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHEEcHHHHHHHHHHcccccHHEccEEEEEEEcccccEEEEccccHHHHHHccccccccccccEEEEEEccccEEEEEEccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccEcccccHHHEEEcccccEEEcccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHccccccccHccEEEEEEcccccHHHHccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEccccEEEccccccccccccEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEccccccEEEEEEEccccEEEEEEccccccEEEccccHccHHHHccccccccc
Coil and Loop (DISEMBL)
mslpvnlglglnsILRQSTVVKLVDNHKLFDWFCSWFqnvhtsqvslssnpdsdfrysaiftpigiykGRIFAIKRIPKKSVDITRAMKKELKIdimenedvklDNMFIASLVADILRGMLYLHDSalryhgnlkasnclvdsrwVVKLADFgltefkrdaeytgtdqhsflqhtyhvnragsteslhckcDEALLFEMLPRSVAEQLRrgtsveaesfdsvtiYFSDIVGftamsaestplQVVDFLNDLYTcfdsivgnydvykvetiGDAYMVvsglpirngeqhavgnydvykvetiGDAYMVvsglpirngeqhaGEIASMSLDLLEAVKRFtvrhrphddlklrigihsgpvcagvvglkmpryclfgdtvntasrmestgedvva
Flexible Loop (DISEMBL)
mslpvnlglglnsILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSlssnpdsdfrYSAIFTpigiykgrifaikripkksvditRAMKKelkidimenedvkLDNMFIASLVADILRGMLYLHDSALRYHGNLKasnclvdsrWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRgtsveaesfdsvTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRphddlklrigihsgpVCAGVVGLKMPRYCLFGDTVNtasrmestgedvva
Low Complexity Region (SEG)
MSLPVNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVVA
Disordered region (IsUnstruct)
****VNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSL*****SDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVN**************
Disordered Region (DISOPRED)
***PVNLGLGLNSILRQSTVVKLVDNHKLFDWF*************************AIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNR**********CDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG*****
Disordered Region (DISEMBL)
MSLPVNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASR**********
Disordered Region (DISPRO)
*SLPVNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNT*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLPVNLGLGLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	392	2.2.26 [Sep-21-2011]
P46197	1047	Atrial natriuretic peptid	no	N/A	0.420	0.157	0.663	1e-70
P16067	1047	Atrial natriuretic peptid	yes	N/A	0.420	0.157	0.663	1e-70
Q6VVW5	1047	Atrial natriuretic peptid	yes	N/A	0.420	0.157	0.663	1e-70
P20594	1047	Atrial natriuretic peptid	yes	N/A	0.420	0.157	0.663	2e-70
P18910	1057	Atrial natriuretic peptid	no	N/A	0.420	0.156	0.653	4e-70
P18293	1057	Atrial natriuretic peptid	no	N/A	0.420	0.156	0.653	5e-70
P16066	1061	Atrial natriuretic peptid	no	N/A	0.420	0.155	0.653	1e-69
P55202	1050	Atrial natriuretic peptid	N/A	N/A	0.420	0.157	0.663	9e-68
Q07553	1163	Guanylate cyclase 32E OS=	no	N/A	0.433	0.146	0.582	1e-60
P51841	1108	Retinal guanylyl cyclase	no	N/A	0.418	0.148	0.594	2e-59

>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2 SV=1

 Score =  267 bits (682), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/196 (66%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 831 EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 890

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
           TCFD+I+ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 891 TCFDAIIDNFDV-------------------------------YKVETIGDAYMVVSGLP 919

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            RNG++HA EIA M+L LL+AV  F +RHRPHD L+LRIG+H+GPVCAGVVGLKMPRYCL
Sbjct: 920 GRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRLRIGVHTGPVCAGVVGLKMPRYCL 979

Query: 373 FGDTVNTASRMESTGE 388
           FGDTVNTASRMES G+
Sbjct: 980 FGDTVNTASRMESNGQ 995

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.
Bos taurus (taxid: 9913)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2

>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2 PE=1 SV=1

 Score =  267 bits (682), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/196 (66%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 831 EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 890

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
           TCFD+I+ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 891 TCFDAIIDNFDV-------------------------------YKVETIGDAYMVVSGLP 919

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            RNG++HA EIA M+L LL+AV  F +RHRPHD L+LRIG+H+GPVCAGVVGLKMPRYCL
Sbjct: 920 GRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRLRIGVHTGPVCAGVVGLKMPRYCL 979

Query: 373 FGDTVNTASRMESTGE 388
           FGDTVNTASRMES G+
Sbjct: 980 FGDTVNTASRMESNGQ 995

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2 SV=2

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/196 (66%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 831 EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 890

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
           TCFD+I+ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 891 TCFDAIIDNFDV-------------------------------YKVETIGDAYMVVSGLP 919

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            RNG++HA EIA M+L LL+AV  F +RHRPHD L+LRIG+H+GPVCAGVVGLKMPRYCL
Sbjct: 920 GRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRLRIGVHTGPVCAGVVGLKMPRYCL 979

Query: 373 FGDTVNTASRMESTGE 388
           FGDTVNTASRMES G+
Sbjct: 980 FGDTVNTASRMESNGQ 995

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1

 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/196 (66%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 831 EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 890

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
           TCFD+I+ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 891 TCFDAIIDNFDV-------------------------------YKVETIGDAYMVVSGLP 919

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            RNG++HA EIA M+L LL+AV  F +RHRPHD L+LRIG+H+GPVCAGVVGLKMPRYCL
Sbjct: 920 GRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRLRIGVHTGPVCAGVVGLKMPRYCL 979

Query: 373 FGDTVNTASRMESTGE 388
           FGDTVNTASRMES G+
Sbjct: 980 FGDTVNTASRMESNGQ 995

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1 PE=1 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193  EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
            EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 842  EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 901

Query: 253  TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
            TCFD+++ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 902  TCFDAVIDNFDV-------------------------------YKVETIGDAYMVVSGLP 930

Query: 313  IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            +RNG+ HA E+A M+L LL+AV+ F +RHRP + L+LRIGIH+GPVCAGVVGLKMPRYCL
Sbjct: 931  VRNGQLHAREVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCL 990

Query: 373  FGDTVNTASRMESTGE 388
            FGDTVNTASRMES GE
Sbjct: 991  FGDTVNTASRMESNGE 1006

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2 SV=2

 Score =  265 bits (677), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 151/196 (77%), Gaps = 31/196 (15%)

Query: 193  EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
            EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 842  EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 901

Query: 253  TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
            TCFD+++ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 902  TCFDAVIDNFDV-------------------------------YKVETIGDAYMVVSGLP 930

Query: 313  IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            +RNG+ HA E+A M+L LL+AV+ F +RHRP + L+LRIGIH+GPVCAGVVGLKMPRYCL
Sbjct: 931  VRNGQLHAREVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCL 990

Query: 373  FGDTVNTASRMESTGE 388
            FGDTVNTASRMES GE
Sbjct: 991  FGDTVNTASRMESNGE 1006

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1

 Score =  264 bits (674), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 150/196 (76%), Gaps = 31/196 (15%)

Query: 193  EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
            EALL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFTA+SAESTP+QVV  LNDLY
Sbjct: 846  EALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLY 905

Query: 253  TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
            TCFD+++ N+DV                               YKVETIGDAYMVVSGLP
Sbjct: 906  TCFDAVIDNFDV-------------------------------YKVETIGDAYMVVSGLP 934

Query: 313  IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            +RNG  HA E+A M+L LL+AV+ F +RHRP + L+LRIGIH+GPVCAGVVGLKMPRYCL
Sbjct: 935  VRNGRLHACEVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCL 994

Query: 373  FGDTVNTASRMESTGE 388
            FGDTVNTASRMES GE
Sbjct: 995  FGDTVNTASRMESNGE 1010

Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2 PE=2 SV=1

 Score =  257 bits (657), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 130/196 (66%), Positives = 146/196 (74%), Gaps = 31/196 (15%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           E LL+++LP SVAEQL+RG +V+AE+FDSVTIYFSDIVGFT+MSAESTPLQVV  LNDLY
Sbjct: 835 ENLLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTSMSAESTPLQVVTLLNDLY 894

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
           TCFD+I+ N+DV                               YKVETIGDAYMVVS   
Sbjct: 895 TCFDAIIDNFDV-------------------------------YKVETIGDAYMVVSDSQ 923

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
            RNG+ HA EIA MSL LLE VK F +RHRP+D L+LRIGIH+GPVCAGVVGLKMPRYCL
Sbjct: 924 SRNGKLHAREIAGMSLALLEQVKTFKIRHRPNDQLRLRIGIHTGPVCAGVVGLKMPRYCL 983

Query: 373 FGDTVNTASRMESTGE 388
           FGDTVNTASRMES GE
Sbjct: 984 FGDTVNTASRMESNGE 999

Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.

Anguilla japonica (taxid: 7937)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|Q07553|GCY3E_DROME Guanylate cyclase 32E OS=Drosophila melanogaster GN=Gyc32E PE=1 SV=4

 Score =  234 bits (596), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 138/201 (68%), Gaps = 31/201 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  + LL++MLPR VAE L+RG  VEAE FD VTI FSDIVGFT +   STP +VV+ LN
Sbjct: 840  KKTDMLLYQMLPRPVAELLKRGDPVEAECFDCVTILFSDIVGFTELCTTSTPFEVVEMLN 899

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            D YTC DSI+ NYD                               VYKVETIGDAYMVVS
Sbjct: 900  DWYTCCDSIISNYD-------------------------------VYKVETIGDAYMVVS 928

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLP++NG +HAGEIAS++L LLE V    +RH+P + ++LRIG+HSGP  AGVVG KMPR
Sbjct: 929  GLPLQNGSRHAGEIASLALHLLETVGNLKIRHKPTETVQLRIGVHSGPCAAGVVGQKMPR 988

Query: 370  YCLFGDTVNTASRMESTGEDV 390
            YCLFGDTVNTASRMESTG+ +
Sbjct: 989  YCLFGDTVNTASRMESTGDSM 1009

Drosophila melanogaster (taxid: 7227)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

>sp|P51841|GUC2F_HUMAN Retinal guanylyl cyclase 2 OS=Homo sapiens GN=GUCY2F PE=2 SV=2

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/195 (59%), Positives = 137/195 (70%), Gaps = 31/195 (15%)

Query: 193  EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
            E LL +MLP SVAE L++G +VE E FD VT+YFSDIVGFT +SA S P++VVD LNDLY
Sbjct: 854  EKLLTQMLPPSVAESLKKGCTVEPEGFDLVTLYFSDIVGFTTISAMSEPIEVVDLLNDLY 913

Query: 253  TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
            T FD+I+G++DV                               YKVETIGDAYMV SGLP
Sbjct: 914  TLFDAIIGSHDV-------------------------------YKVETIGDAYMVASGLP 942

Query: 313  IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
             RNG +HA EIA+MSLD+L +V  F +RH P   +++RIG+HSGPV AGVVGL MPRYCL
Sbjct: 943  KRNGSRHAAEIANMSLDILSSVGTFKMRHMPEVPVRIRIGLHSGPVVAGVVGLTMPRYCL 1002

Query: 373  FGDTVNTASRMESTG 387
            FGDTVNTASRMESTG
Sbjct: 1003 FGDTVNTASRMESTG 1017

Probably plays a specific functional role in the rods and/or cones of photoreceptors. It may be the enzyme involved in the resynthesis of cGMP required for recovery of the dark state after phototransduction.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
291229634	946	PREDICTED: receptor type guanylyl cyclas	0.818	0.339	0.446	9e-84
260821567	258	hypothetical protein BRAFLDRAFT_88014 [B	0.607	0.922	0.562	3e-81
350402385	1287	PREDICTED: guanylate cyclase 32E-like [B	0.426	0.129	0.752	3e-76
242006264	1153	Speract receptor precursor, putative [Pe	0.426	0.144	0.727	5e-76
328780226	1293	PREDICTED: guanylate cyclase 32E-like [A	0.426	0.129	0.742	2e-75
307200387	1303	Guanylate cyclase 32E [Harpegnathos salt	0.426	0.128	0.727	2e-75
383862093	1298	PREDICTED: guanylate cyclase 32E-like [M	0.426	0.128	0.732	1e-74
345492236	1333	PREDICTED: guanylate cyclase 32E-like [N	0.426	0.125	0.727	2e-74
91091300	1256	PREDICTED: similar to guanylyl cyclase r	0.426	0.132	0.732	2e-73
158300454	1199	AGAP012161-PA [Anopheles gambiae str. PE	0.433	0.141	0.721	4e-73

>gi|291229634|ref|XP_002734778.1| PREDICTED: receptor type guanylyl cyclase-like [Saccoglossus kowalevskii]

 Score =  317 bits (811), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 188/421 (44%), Positives = 240/421 (57%), Gaps = 100/421 (23%)

Query: 35  SWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYK--------GRIFAIKRIPKKSVDITR 86
           S F +++    S+  + + D     IF  +G YK        G   A+K+I K+ +D+ R
Sbjct: 506 SRFLSLNVMNKSMLLDNEDDIAEQQIFANVGHYKVYNVSYVFGSFVAVKKIHKERIDLNR 565

Query: 87  AMKKELK-----------------------------------IDIMENEDVKLDNMFIAS 111
            +  ELK                                    DI++N+ ++LD MF  S
Sbjct: 566 DILIELKNMREVEHGHIVRFIGACVDSPCIAIVTEYCPKGSLQDILQNDSLQLDWMFRYS 625

Query: 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--------EY 163
           L+ DI++G+ +LH S ++ HGNL +SNC+VDSR+V+KLADFGL +FK ++        E 
Sbjct: 626 LINDIVKGLHFLHHSVMKRHGNLSSSNCVVDSRFVLKLADFGLEKFKANSSSSDNAFGEL 685

Query: 164 TGTDQHS------FLQHTYHVNRAGSTESL----------HCKCDEALLFEMLPRSVAEQ 207
           T  + HS       LQ       A + ESL            K  E LL+ +LP SVA+Q
Sbjct: 686 TSDESHSDNIMDNLLQRMEQY--ANNLESLVEQRTEAFLEEKKKSEQLLYSILPNSVAKQ 743

Query: 208 LRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKV 267
           L RG  VE ESFD VT+YFSDIVGFTA+SA STPLQVVD LNDLY CFD+++ N+DV   
Sbjct: 744 LIRGERVEPESFDCVTVYFSDIVGFTALSAGSTPLQVVDMLNDLYICFDALISNFDV--- 800

Query: 268 ETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMS 327
                                       YKVETIGDAYMV SGLPIRNG +HA E+A MS
Sbjct: 801 ----------------------------YKVETIGDAYMVASGLPIRNGNRHAREVARMS 832

Query: 328 LDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
           L LL+AV  F ++H+P+  ++LRIGIHSGP  AGVVGLKMPRYCLFGDTVNTASRMES G
Sbjct: 833 LALLKAVLSFKIKHQPNHQMRLRIGIHSGPCVAGVVGLKMPRYCLFGDTVNTASRMESNG 892

Query: 388 E 388
           E
Sbjct: 893 E 893

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|260821567|ref|XP_002606104.1| hypothetical protein BRAFLDRAFT_88014 [Branchiostoma floridae] gi|229291442|gb|EEN62114.1| hypothetical protein BRAFLDRAFT_88014 [Branchiostoma floridae]

 Score =  308 bits (789), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 162/288 (56%), Positives = 190/288 (65%), Gaps = 50/288 (17%)

Query: 120 MLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK--------RDAEYTGTDQHSF 171
           M+YLH S L+YHGNLK+SNC+VDSRWVVK+ DFGL EFK          A Y  T  + F
Sbjct: 1   MIYLHSSELKYHGNLKSSNCVVDSRWVVKVTDFGLQEFKAGSKDEAGEHAYYRSTKSNIF 60

Query: 172 -----LQHTYHVNRAGSTESL------HCKCDEALLFEMLPRSVAEQLRRGTSVEAESFD 220
                +   Y  N     E          K  +ALL+ MLP++VA+QL+RG  V+ ESFD
Sbjct: 61  DNMMNIMEKYANNLEELVEERTHQLVEEKKKTDALLYSMLPKTVADQLKRGKRVDPESFD 120

Query: 221 SVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGL 280
            VTI+FSDIVGFT++SAESTPLQVVD LNDLYTCFD I+ N+DV                
Sbjct: 121 MVTIFFSDIVGFTSLSAESTPLQVVDLLNDLYTCFDDIISNFDV---------------- 164

Query: 281 PIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVR 340
                          YKVETIGDAYMVVSGLP++NG++HAGEIASM+L LL+AV  F +R
Sbjct: 165 ---------------YKVETIGDAYMVVSGLPLKNGDRHAGEIASMALALLKAVSSFKIR 209

Query: 341 HRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           HR    + LRIGIHSGP CAGVVGLKMPRYCLFGDTVNT SRMES G+
Sbjct: 210 HRGDHKMHLRIGIHSGPCCAGVVGLKMPRYCLFGDTVNTTSRMESNGQ 257

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350402385|ref|XP_003486465.1| PREDICTED: guanylate cyclase 32E-like [Bombus impatiens]

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/198 (75%), Positives = 156/198 (78%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  +ALL+EMLPR VAEQL+RG  VEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 864  KKTDALLYEMLPRYVAEQLKRGHKVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 923

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS                                + NYDVYKVETIGDAYMVVS
Sbjct: 924  DLYTCFDS-------------------------------TIENYDVYKVETIGDAYMVVS 952

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG QHAGEIASMSL LLEAVK+FT+RHRP D L+LRIGIHSGPVCAGVVGLKMPR
Sbjct: 953  GLPIRNGIQHAGEIASMSLCLLEAVKQFTIRHRPLDKLQLRIGIHSGPVCAGVVGLKMPR 1012

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 1013 YCLFGDTVNTASRMESTG 1030

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006264|ref|XP_002423972.1| Speract receptor precursor, putative [Pediculus humanus corporis] gi|212507254|gb|EEB11234.1| Speract receptor precursor, putative [Pediculus humanus corporis]

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 158/198 (79%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  EALL+EMLPR+VAEQL+RG  VEAE+FDSVTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 849  KKTEALLYEMLPRTVAEQLKRGNKVEAENFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 908

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS + NYDVYKVETIGDAYMVVSGLPIRNG                        
Sbjct: 909  DLYTCFDSTIENYDVYKVETIGDAYMVVSGLPIRNG------------------------ 944

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
                   +QHAGEIA+MSL LLEAV++F ++HRP++ +KLRIGIHSGPVCAGVVGLKMPR
Sbjct: 945  -------DQHAGEIATMSLHLLEAVEKFQIKHRPNEGVKLRIGIHSGPVCAGVVGLKMPR 997

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 998  YCLFGDTVNTASRMESTG 1015

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780226|ref|XP_623361.3| PREDICTED: guanylate cyclase 32E-like [Apis mellifera]

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/198 (74%), Positives = 156/198 (78%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  +ALL+EMLPR VAEQL+RG  VEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 866  KKTDALLYEMLPRYVAEQLKRGHKVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 925

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS                                + NYDVYKVETIGDAYMVVS
Sbjct: 926  DLYTCFDS-------------------------------TIENYDVYKVETIGDAYMVVS 954

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG QHAGEIASMSL LL+A+K+FT+RHRP D L+LRIGIHSGPVCAGVVGLKMPR
Sbjct: 955  GLPIRNGIQHAGEIASMSLCLLDAIKQFTIRHRPLDKLQLRIGIHSGPVCAGVVGLKMPR 1014

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 1015 YCLFGDTVNTASRMESTG 1032

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200387|gb|EFN80626.1| Guanylate cyclase 32E [Harpegnathos saltator]

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 155/198 (78%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  +ALL+EMLPR VAEQL++G  VEAESFD VTIYFSDIVGFT+MSAESTPLQVVDFLN
Sbjct: 878  KKTDALLYEMLPRYVAEQLKKGHKVEAESFDCVTIYFSDIVGFTSMSAESTPLQVVDFLN 937

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS                                + NYDVYKVETIGDAYMVVS
Sbjct: 938  DLYTCFDS-------------------------------TIQNYDVYKVETIGDAYMVVS 966

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG QHAGEIASMSL LL+A+K+F +RHRPHD L+LRIGIHSGPVCAGVVGLKMPR
Sbjct: 967  GLPIRNGIQHAGEIASMSLCLLDAIKQFAIRHRPHDKLQLRIGIHSGPVCAGVVGLKMPR 1026

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 1027 YCLFGDTVNTASRMESTG 1044

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862093|ref|XP_003706518.1| PREDICTED: guanylate cyclase 32E-like [Megachile rotundata]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/198 (73%), Positives = 155/198 (78%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  +ALL+EMLPR VAEQL+RG  VEAE+FD VTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 871  KKTDALLYEMLPRYVAEQLKRGHKVEAENFDCVTIYFSDIVGFTAMSAESTPLQVVDFLN 930

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS                                + NYDVYKVETIGDAYMVVS
Sbjct: 931  DLYTCFDS-------------------------------TIENYDVYKVETIGDAYMVVS 959

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG QHAGEIASMSL LL+A+K+FT+RHRP D L+LRIGIHSGPVCAGVVGLKMPR
Sbjct: 960  GLPIRNGIQHAGEIASMSLCLLDAIKQFTIRHRPLDKLQLRIGIHSGPVCAGVVGLKMPR 1019

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 1020 YCLFGDTVNTASRMESTG 1037

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492236|ref|XP_001600625.2| PREDICTED: guanylate cyclase 32E-like [Nasonia vitripennis]

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 155/198 (78%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  +ALL+EMLPR VAEQL+RG  VEAE+FD VTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 871  KKTDALLYEMLPRYVAEQLKRGHKVEAENFDCVTIYFSDIVGFTAMSAESTPLQVVDFLN 930

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDS                                + NYDVYKVETIGDAYMVVS
Sbjct: 931  DLYTCFDS-------------------------------TIENYDVYKVETIGDAYMVVS 959

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG QHAGEIASMSL LL+A+K+F++RHRP D L+LRIGIHSGPVCAGVVGLKMPR
Sbjct: 960  GLPIRNGIQHAGEIASMSLHLLDAIKQFSIRHRPLDKLQLRIGIHSGPVCAGVVGLKMPR 1019

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 1020 YCLFGDTVNTASRMESTG 1037

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091300|ref|XP_970405.1| PREDICTED: similar to guanylyl cyclase receptor [Tribolium castaneum] gi|270013084|gb|EFA09532.1| hypothetical protein TcasGA2_TC011636 [Tribolium castaneum]

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/198 (73%), Positives = 152/198 (76%), Gaps = 31/198 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  EALL+EMLPR VAEQL+RG  VEAESFD VTIYFSDIVGFTAMSAESTPLQVVDFLN
Sbjct: 834  KKTEALLYEMLPRPVAEQLKRGNKVEAESFDCVTIYFSDIVGFTAMSAESTPLQVVDFLN 893

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDSI+                           +H    YDVYKVETIGDAYMVVS
Sbjct: 894  DLYTCFDSII---------------------------EH----YDVYKVETIGDAYMVVS 922

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRN  QHA EIASMSL LL  VK+FT+RHRP + L LRIGIHSGPVCAGVVGLKMPR
Sbjct: 923  GLPIRNDNQHAAEIASMSLHLLAEVKQFTIRHRPTEKLMLRIGIHSGPVCAGVVGLKMPR 982

Query: 370  YCLFGDTVNTASRMESTG 387
            YCLFGDTVNTASRMESTG
Sbjct: 983  YCLFGDTVNTASRMESTG 1000

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300454|ref|XP_320372.4| AGAP012161-PA [Anopheles gambiae str. PEST] gi|157013167|gb|EAA00177.4| AGAP012161-PA [Anopheles gambiae str. PEST]

 Score =  281 bits (719), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/201 (72%), Positives = 153/201 (76%), Gaps = 31/201 (15%)

Query: 190  KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLN 249
            K  EALL EMLPR VAEQL+RG  VEAES+D VTIYFSDIVGFT+MSAESTPLQVVDFLN
Sbjct: 842  KKTEALLLEMLPRPVAEQLKRGHKVEAESYDLVTIYFSDIVGFTSMSAESTPLQVVDFLN 901

Query: 250  DLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVS 309
            DLYTCFDSI+G+YD                               VYKVETIGDAYMVVS
Sbjct: 902  DLYTCFDSIIGHYD-------------------------------VYKVETIGDAYMVVS 930

Query: 310  GLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR 369
            GLPIRNG  HA EIASMSL LLEAV  F VRHRP+D L LRIGIHSGPVCAGVVGLKMPR
Sbjct: 931  GLPIRNGLIHAAEIASMSLQLLEAVAEFKVRHRPNDRLYLRIGIHSGPVCAGVVGLKMPR 990

Query: 370  YCLFGDTVNTASRMESTGEDV 390
            YCLFGDTVNTASRMESTG+ +
Sbjct: 991  YCLFGDTVNTASRMESTGQPL 1011

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	392
FB|FBgn0036368	1272	CG10738 [Drosophila melanogast	0.25	0.077	0.816	2.5e-86
FB|FBgn0010197	1163	Gyc32E "Guanyl cyclase at 32E"	0.257	0.086	0.722	1.2e-66
ZFIN|ZDB-GENE-060503-539	1067	npr1a "natriuretic peptide rec	0.252	0.092	0.818	4.4e-63
UNIPROTKB|F1PMN5	851	NPR2 "Guanylate cyclase" [Cani	0.252	0.116	0.787	5.4e-63
UNIPROTKB|F1SFW3	831	NPR1 "Guanylate cyclase" [Sus	0.252	0.119	0.777	5.9e-63
UNIPROTKB|F1PPT9	967	NPR2 "Guanylate cyclase" [Cani	0.252	0.102	0.787	1.5e-62
UNIPROTKB|P46197	1047	NPR2 "Atrial natriuretic pepti	0.252	0.094	0.787	2.7e-62
UNIPROTKB|P20594	1047	NPR2 "Atrial natriuretic pepti	0.252	0.094	0.787	2.7e-62
UNIPROTKB|F1STB3	1047	NPR2 "Guanylate cyclase" [Sus	0.252	0.094	0.787	2.7e-62
MGI|MGI:97372	1047	Npr2 "natriuretic peptide rece	0.252	0.094	0.787	2.7e-62

FB|FBgn0036368 CG10738 [Drosophila melanogaster (taxid:7227)]

 Score = 422 (153.6 bits), Expect = 2.5e-86, Sum P(3) = 2.5e-86
 Identities = 80/98 (81%), Positives = 88/98 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             +G+YDVYKVETIGDAYMVVSGLP+RNG+ HA EIA+MSL LL AV  F +RHRP + L L
Sbjct:   980 IGHYDVYKVETIGDAYMVVSGLPLRNGDLHAAEIATMSLHLLSAVSEFKIRHRPTNRLLL 1039

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
             RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES+G
Sbjct:  1040 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESSG 1077

GO:0004872 "receptor activity" evidence=ISS

GO:0004383 "guanylate cyclase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

GO:0007030 "Golgi organization" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

FB|FBgn0010197 Gyc32E "Guanyl cyclase at 32E" [Drosophila melanogaster (taxid:7227)]

 Score = 399 (145.5 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
 Identities = 73/101 (72%), Positives = 87/101 (86%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + NYDVYKVETIGDAYMVVSGLP++NG +HAGEIAS++L LLE V    +RH+P + ++L
Sbjct:   909 ISNYDVYKVETIGDAYMVVSGLPLQNGSRHAGEIASLALHLLETVGNLKIRHKPTETVQL 968

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDV 390
             RIG+HSGP  AGVVG KMPRYCLFGDTVNTASRMESTG+ +
Sbjct:   969 RIGVHSGPCAAGVVGQKMPRYCLFGDTVNTASRMESTGDSM 1009

GO:0004383 "guanylate cyclase activity" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS;NAS

GO:0006182 "cGMP biosynthetic process" evidence=NAS

GO:0007165 "signal transduction" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

ZFIN|ZDB-GENE-060503-539 npr1a "natriuretic peptide receptor 1a" [Danio rerio (taxid:7955)]

 Score = 422 (153.6 bits), Expect = 4.4e-63, Sum P(3) = 4.4e-63
 Identities = 81/99 (81%), Positives = 88/99 (88%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP+RNG+ HA EIA MSL LLEAV  F +RHRP+  L+L
Sbjct:   919 IDNFDVYKVETIGDAYMVVSGLPVRNGKLHAREIARMSLALLEAVHSFRIRHRPNLQLRL 978

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES GE
Sbjct:   979 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGE 1017

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IEA

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1PMN5 NPR2 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 424 (154.3 bits), Expect = 5.4e-63, Sum P(3) = 5.4e-63
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   701 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 760

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   761 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 799

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1SFW3 NPR1 "Guanylate cyclase" [Sus scrofa (taxid:9823)]

 Score = 420 (152.9 bits), Expect = 5.9e-63, Sum P(3) = 5.9e-63
 Identities = 77/99 (77%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP+RNG+ HA E+A M+L LL+AV+ F +RHRP + L+L
Sbjct:   682 IDNFDVYKVETIGDAYMVVSGLPVRNGKLHAREVARMALALLDAVRSFRIRHRPQEQLRL 741

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIGIH+GPVCAGVVGLKMPRYCLFGDTVNTASRMES GE
Sbjct:   742 RIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGE 780

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1PPT9 NPR2 "Guanylate cyclase" [Canis lupus familiaris (taxid:9615)]

 Score = 424 (154.3 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   817 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 876

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   877 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 915

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|P46197 NPR2 "Atrial natriuretic peptide receptor 2" [Bos taurus (taxid:9913)]

 Score = 424 (154.3 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   897 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 956

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   957 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 995

GO:0042802 "identical protein binding" evidence=ISS

GO:0016941 "natriuretic peptide receptor activity" evidence=ISS

GO:0006182 "cGMP biosynthetic process" evidence=ISS

GO:0004383 "guanylate cyclase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|P20594 NPR2 "Atrial natriuretic peptide receptor 2" [Homo sapiens (taxid:9606)]

 Score = 424 (154.3 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   897 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 956

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   957 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 995

GO:0004672 "protein kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0017046 "peptide hormone binding" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0060348 "bone development" evidence=IEA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0016941 "natriuretic peptide receptor activity" evidence=IDA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IDA

GO:0042562 "hormone binding" evidence=IPI

GO:0097011 "cellular response to granulocyte macrophage colony-stimulating factor stimulus" evidence=IEP

GO:0004872 "receptor activity" evidence=TAS

GO:0007165 "signal transduction" evidence=NAS

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

GO:0004888 "transmembrane signaling receptor activity" evidence=TAS

GO:0008217 "regulation of blood pressure" evidence=TAS

UNIPROTKB|F1STB3 NPR2 "Guanylate cyclase" [Sus scrofa (taxid:9823)]

 Score = 424 (154.3 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   897 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 956

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   957 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 995

GO:0097011 "cellular response to granulocyte macrophage colony-stimulating factor stimulus" evidence=IEA

GO:0060348 "bone development" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0042562 "hormone binding" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=IEA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

MGI|MGI:97372 Npr2 "natriuretic peptide receptor 2" [Mus musculus (taxid:10090)]

 Score = 424 (154.3 bits), Expect = 2.7e-62, Sum P(3) = 2.7e-62
 Identities = 78/99 (78%), Positives = 89/99 (89%)

Query:   290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349
             + N+DVYKVETIGDAYMVVSGLP RNG++HA EIA M+L LL+AV  F +RHRPHD L+L
Sbjct:   897 IDNFDVYKVETIGDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRL 956

Query:   350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             RIG+H+GPVCAGVVGLKMPRYCLFGDTVNTASRMES G+
Sbjct:   957 RIGVHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGQ 995

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=ISO;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=ISO

GO:0005525 "GTP binding" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;TAS

GO:0006182 "cGMP biosynthetic process" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IDA

GO:0007168 "receptor guanylyl cyclase signaling pathway" evidence=ISO

GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA

GO:0016941 "natriuretic peptide receptor activity" evidence=ISO;IDA

GO:0017046 "peptide hormone binding" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0042562 "hormone binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=IPI

GO:0060348 "bone development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6VVW5	ANPRB_MOUSE	4, ., 6, ., 1, ., 2	0.6632	0.4209	0.1575	yes	N/A
P16067	ANPRB_RAT	4, ., 6, ., 1, ., 2	0.6632	0.4209	0.1575	yes	N/A
P20594	ANPRB_HUMAN	4, ., 6, ., 1, ., 2	0.6632	0.4209	0.1575	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.6.1.2	0.737
3rd Layer	4.6.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	392
smart00044	194	smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca	2e-82
pfam00211	184	pfam00211, Guanylate_cyc, Adenylate and Guanylate	1e-66
cd07302	177	cd07302, CHD, cyclase homology domain	1e-52
cd07556	133	cd07556, Nucleotidyl_cyc_III, Class III nucleotidy	3e-29
COG2114	227	COG2114, CyaA, Adenylate cyclase, family 3 (some p	1e-24
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-08
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	7e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	8e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-05
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	5e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	5e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	6e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	5e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	8e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.001
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.001
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	0.001
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.001
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.001
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.001
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.001
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.002
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.002
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.002
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.002
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.003
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	0.003
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.003
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.003
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.003
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.003
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.003
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.004
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.004
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.004
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.004
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.004
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.004

>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain

 Score =  249 bits (639), Expect = 2e-82
 Identities = 102/201 (50%), Positives = 129/201 (64%), Gaps = 33/201 (16%)

Query: 189 CKCDEALLFEMLPRSVAEQLRRG-TSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDF 247
            K  + LL ++LP SVAEQL+RG + V AES+D+VTI FSDIVGFT++ + STP QVV+ 
Sbjct: 3   KKKTDRLLDQLLPASVAEQLKRGGSPVPAESYDNVTILFSDIVGFTSLCSTSTPEQVVNL 62

Query: 248 LNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMV 307
           LNDLY+ FD I+  +  YKV+TIGDAYMV SGLP      HA                  
Sbjct: 63  LNDLYSRFDQIIDRHGGYKVKTIGDAYMVASGLPEEALVDHAE----------------- 105

Query: 308 VSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKM 367
                          IA  +LD++E +K   V+HR  + L++RIGIH+GPV AGVVG++M
Sbjct: 106 --------------LIADEALDMVEELKTVLVQHR-EEGLRVRIGIHTGPVVAGVVGIRM 150

Query: 368 PRYCLFGDTVNTASRMESTGE 388
           PRYCLFGDTVN ASRMES G+
Sbjct: 151 PRYCLFGDTVNLASRMESAGD 171

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194

>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain

 Score =  209 bits (534), Expect = 1e-66
 Identities = 79/176 (44%), Positives = 105/176 (59%), Gaps = 34/176 (19%)

Query: 214 VEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDA 273
           V A+S+D+VTI F+DIVGFTA+S+  +P ++V  LNDLYT FD ++  + VYKV+TIGDA
Sbjct: 1   VYAQSYDNVTILFADIVGFTALSSRHSPEELVRLLNDLYTRFDELLDKHGVYKVKTIGDA 60

Query: 274 YMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEA 333
           YM  SGLP                                     HA  +A M+LD+LEA
Sbjct: 61  YMAASGLP--------------------------------EPSPAHAQTLAEMALDMLEA 88

Query: 334 VKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGED 389
           +K   +       L++R+GIH+GPV AGV+G + PRY ++GDTVN ASRMESTG  
Sbjct: 89  IKSVNIHSFE--GLRVRVGIHTGPVVAGVIGARRPRYDVWGDTVNLASRMESTGVP 142

Length = 184

>gnl|CDD|143636 cd07302, CHD, cyclase homology domain

 Score =  172 bits (439), Expect = 1e-52
 Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 32/167 (19%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           VT+ F+DIVGFTA+S    P ++V+ LN+ ++ FD I+  +     +TIGDA M V GLP
Sbjct: 2   VTVLFADIVGFTALSERLGPEELVELLNEYFSAFDEIIERHGGTVDKTIGDAVMAVFGLP 61

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
             +                                E HA      +L++ EA+       
Sbjct: 62  GAH--------------------------------EDHAERAVRAALEMQEALAELNAER 89

Query: 342 RPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
                L+LRIGIH+GPV AGVVG + P Y + GDTVN A+R+ES  +
Sbjct: 90  EGGPPLRLRIGIHTGPVVAGVVGSERPEYTVIGDTVNLAARLESLAK 136

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide. Length = 177

>gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases

 Score =  110 bits (276), Expect = 3e-29
 Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 40/167 (23%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           VTI F+DIVGFT+++    P +  + LN+L   FDS++      K++TIGD +MVVSGL 
Sbjct: 2   VTILFADIVGFTSLADALGPDEGDELLNELAGRFDSLIRRSGDLKIKTIGDEFMVVSGL- 60

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
                                                H     + + D+ EAV    +  
Sbjct: 61  ------------------------------------DHPAAAVAFAEDMREAVSA--LNQ 82

Query: 342 RPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
              + +++RIGIH+GPV  GV+G + P+Y ++G  VN ASRMES  +
Sbjct: 83  SEGNPVRVRIGIHTGPVVVGVIGSR-PQYDVWGALVNLASRMESQAK 128

Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways. Length = 133

>gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]

 Score =  100 bits (250), Expect = 1e-24
 Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 45/193 (23%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
           + +L   L R V   L RG          VT+ F+DIVG T +S       +V+ LN  +
Sbjct: 22  DLVLRLYLARVVGRLLARG----GAGDRRVTLLFADIVGSTELSESLGDEALVELLNLYF 77

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
                +V  +    V+ IGD ++ V G P  +  + AV                      
Sbjct: 78  DAVAEVVARHGGRVVKFIGDGFLAVFGRP--SPLEDAVA--------------------- 114

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
                        + L L   + R        + L++RIGIH+G V  G  G     Y +
Sbjct: 115 ---------CALDLQLALRNPLAR-----LRRESLRVRIGIHTGEVVVGNTG----GYTV 156

Query: 373 FGDTVNTASRMES 385
            G  VN A+R+ES
Sbjct: 157 VGSAVNQAARLES 169

Length = 227

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 38/137 (27%)

Query: 69  GRIFAIKRIPKKSVDITR-AMKKELKI--------------------------------- 94
           G+  AIK I K+        + +E++I                                 
Sbjct: 18  GKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77

Query: 95  --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLAD 151
             D+++  + KL    I  ++  IL G+ YLH + +  H +LK  N L+DS    VKLAD
Sbjct: 78  LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI-IHRDLKPENILLDSDNGKVKLAD 136

Query: 152 FGLTEFKRDAEYTGTDQ 168
           FGL++     +      
Sbjct: 137 FGLSKLLTSDKSLLKTI 153

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 36/133 (27%)

Query: 69  GRIFAIKRIPKKSVDITRA-MKKELKI-------------DIMENED------------- 101
           G++ AIK I KK +   R  + +E+KI             D+ E+ED             
Sbjct: 24  GKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGD 83

Query: 102 --------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                    +L        +  IL  + YLH   +  H +LK  N L+D    VKLADFG
Sbjct: 84  LFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGI-VHRDLKPENILLDEDGHVKLADFG 142

Query: 154 LTEFKRDAEYTGT 166
           L       E   T
Sbjct: 143 LARQLDPGEKLTT 155

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 55.6 bits (135), Expect = 9e-09
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
           S    I RGM YL      + H +L A NCLV    VVK++DFGL+    D +Y 
Sbjct: 106 SFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 158

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163
           S    I RGM YL      + H +L A NCLV    VVK++DFGL+    D +Y
Sbjct: 107 SFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 115 DILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
           D+   M YL  +    H +L A NCLV    VVK++DFGL  +  D +YT
Sbjct: 108 DVCEAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           ++EN  VKL    I   +  +L G+ YLH++ +  H ++KA+N L+D++ ++K+ADFGL
Sbjct: 104 LLENPSVKLTESQIKCYMLQLLEGINYLHENHI-LHRDIKAANILIDNQGILKIADFGL 161

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163
             I +GM YL   + ++ H +L A NCLV    VVK++DFGL+    D +Y
Sbjct: 112 IQIAKGMEYLA--SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           ++++ +VK     I   +  +L G+ YLH + +  H ++K SN L+++  V+KLADFGL 
Sbjct: 89  LLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI-LHRDIKGSNILINNDGVLKLADFGLA 147

Query: 156 ---EFKRDAEYT 164
                +  A+YT
Sbjct: 148 RPYTKRNSADYT 159

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
            DIM+  +  L    IA+++   L+G+ YLH +  + H ++KA N L++     KLADFG
Sbjct: 86  SDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFG 144

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 111 SLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170
           S+  D+  GM YL  ++   H +L A NCLV S  VVK++DFG+T +  D EYT +    
Sbjct: 104 SMCQDVCEGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAK 162

Query: 171 F 171
           F
Sbjct: 163 F 163

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFL 172
             I +GM YL      + H +L A NCLV    VVK++DFGL+    + +Y        L
Sbjct: 109 LQIAKGMEYLESK--NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKL 166

Length = 258

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 115 DILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           D+  GM YL  S +  H +L A NCLV    VVK++DFG+T F  D +YT +    F
Sbjct: 108 DVCEGMAYLESSNV-IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKF 163

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 50.3 bits (120), Expect = 5e-07
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 115 DILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           D+  GM YL +S    H +L A NCLVD +  VK++DFGL+ +  D EYT +
Sbjct: 108 DVCEGMAYL-ESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 39/139 (28%)

Query: 69  GRIFAIK--RIPKKSVDITRAMKKELKI-------------DIMENEDVKLDNMF----- 108
           G + A+K   +   S +   A+++E++I                 +E+    N+F     
Sbjct: 25  GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84

Query: 109 ------------------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                             I      IL G+ YLH + +  H ++K +N LVDS  VVKLA
Sbjct: 85  GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI-VHRDIKGANILVDSDGVVKLA 143

Query: 151 DFGLTEFKRDAEYTGTDQH 169
           DFG  +   D E       
Sbjct: 144 DFGCAKRLGDIETGEGTGS 162

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 37/122 (30%)

Query: 69  GRIFAIKRIPKKSVDITRAMKK--ELKI-------------DIMENED------------ 101
           G+I A+K + K+S    +      E++I             D  E++D            
Sbjct: 24  GKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGG 83

Query: 102 ---------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
                      L       +   ILRG+ YLH + +  H +LK  N L+D   VVK+ADF
Sbjct: 84  DLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGI-IHRDLKPENILLDENGVVKIADF 142

Query: 153 GL 154
           GL
Sbjct: 143 GL 144

Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF-KRDA 161
           +++   +    + I +GM YL       H +L A N LV+S  +VK++DFGL +    D 
Sbjct: 105 QINLKRLLLFSSQICKGMDYLGSQRY-IHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163

Query: 162 EY 163
           +Y
Sbjct: 164 DY 165

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            ++     L    I S++  +LRG+ Y H S    H +LK  N L++   V+KLADFGL
Sbjct: 87  YLDKRPGPLSPNLIKSIMYQLLRGLAYCH-SHRILHRDLKPQNILINRDGVLKLADFGL 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           DI+    V+++   IA +  ++L+G+ YLH S    H ++K+ N L+     VKLADFG
Sbjct: 104 DIITQNFVRMNEPQIAYVCREVLQGLEYLH-SQNVIHRDIKSDNILLSKDGSVKLADFG 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 8/69 (11%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL------TEF 157
           L+  +IA+++ +IL+G+ YLH S  + H ++KA+N L+  +  VKLADFG+      T+ 
Sbjct: 98  LEETYIATILREILKGLDYLH-SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156

Query: 158 KRDAEYTGT 166
           KR+  + GT
Sbjct: 157 KRNT-FVGT 164

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 47.2 bits (113), Expect = 7e-06
 Identities = 43/128 (33%), Positives = 56/128 (43%), Gaps = 46/128 (35%)

Query: 69  GRIFAIKRI-------PKKSVDIT--RAMK--KELKID-IMENEDVKLDNMFIASLV--- 113
           GRI AIK+I        K  ++ T  R +K  +ELK   I+   DV      I +LV   
Sbjct: 25  GRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNI-NLVFEF 83

Query: 114 ------------------ADI-------LRGMLYLHDSALRY--HGNLKASNCLVDSRWV 146
                             ADI       LRG+ YLH     +  H +LK +N L+ S  V
Sbjct: 84  METDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGV 140

Query: 147 VKLADFGL 154
           +KLADFGL
Sbjct: 141 LKLADFGL 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 95  DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
           DIM+        LD   IA+++ ++L+G+ YLH +  + H ++KA N L+     VK+AD
Sbjct: 88  DIMKSSYPRGG-LDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIAD 145

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTY 176
           FG++         G D+   ++ T+
Sbjct: 146 FGVSASL----ADGGDRTRKVRKTF 166

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 8/59 (13%)

Query: 104 LDNM---F----IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           LDNM   F    +  L+  +LRG+ YLH++ +  H +LK SN L+  +  +K+ADFGL 
Sbjct: 98  LDNMPTPFSESQVKCLMLQLLRGLQYLHENFI-IHRDLKVSNLLLTDKGCLKIADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
           A I  GM YL   +  Y H +L A N LV    V K+ADFGL     D EYT
Sbjct: 110 AQIAEGMAYLE--SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 8/69 (11%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL------TEF 157
            D   IA+++ +IL+G+ YLH S  + H ++KA+N L+  +  VKLADFG+      T+ 
Sbjct: 98  FDEFQIATMLKEILKGLDYLH-SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156

Query: 158 KRDAEYTGT 166
           KR+  + GT
Sbjct: 157 KRNT-FVGT 164

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
                 +A  V  +L+G+ YLH+  +  H ++KA+N L     VVKLADFG+
Sbjct: 95  PFPESLVAVYVYQVLQGLAYLHEQGV-IHRDIKAANILTTKDGVVKLADFGV 145

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 8/69 (11%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL------TEF 157
           LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG+      T+ 
Sbjct: 98  LDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156

Query: 158 KRDAEYTGT 166
           KR+  + GT
Sbjct: 157 KRN-TFVGT 164

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           KLD  +IA ++ ++L G+ YLH+   + H ++KA+N L+     VKLADFG++
Sbjct: 94  KLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           IL G+ YLHD     H ++K +N LVD+  VVKLADFG+
Sbjct: 111 ILLGLEYLHDRNT-VHRDIKGANILVDTNGVVKLADFGM 148

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +D   + S +  IL+G+L+ H   +  H +LK  N L+D++ V+KLADFGL
Sbjct: 98  MDAELVKSYLYQILQGILFCHSRRV-LHRDLKPQNLLIDNKGVIKLADFGL 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           ++ +LK  +ME          +  L+  +L G+ +LHD+ +  H +LK SN L+++R ++
Sbjct: 88  VEHDLK-SLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI-LHRDLKTSNLLLNNRGIL 145

Query: 148 KLADFGL 154
           K+ DFGL
Sbjct: 146 KICDFGL 152

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 113 VADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
            A+I  GM YL   A ++ H +L A NC+V     VK+ DFG+T   RD   T
Sbjct: 125 AAEIADGMAYLA--AKKFVHRDLAARNCMVAEDLTVKIGDFGMT---RDIYET 172

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           D++++ +  L    IA +  ++L+G+ YLH S    H ++KA+N L+ S   VKL DFGL
Sbjct: 86  DLLKSTNQTLTESQIAYVCKELLKGLEYLH-SNGIIHRDIKAANILLTSDGEVKLIDFGL 144

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 111 SLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170
            +   +  GM YL +     H +L   NCLV    VVK+ADFGL+     A+Y    ++ 
Sbjct: 134 CIAKQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASEND 192

Query: 171 FL 172
            +
Sbjct: 193 AI 194

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +++ +E+  L    + S +  +L+G+ Y+H + +  H +LK +N L+ +  V+K+ADFGL
Sbjct: 87  EVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI-MHRDLKPANLLISADGVLKIADFGL 145

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.8 bits (107), Expect = 4e-05
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            L +  I   +  ILRG+ YLH SA   H +LK SN LV+S   +K+ DFGL
Sbjct: 99  PLTDDHIQYFLYQILRGLKYLH-SANVIHRDLKPSNILVNSNCDLKICDFGL 149

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADF 152
            D ++    +LD+  +    + I +GM YL   + RY H +L   N LV+S   VK+ DF
Sbjct: 95  RDYLQKHRERLDHRKLLLYASQICKGMEYL--GSKRYVHRDLATRNILVESENRVKIGDF 152

Query: 153 GLTE-FKRDAEY 163
           GLT+   +D EY
Sbjct: 153 GLTKVLPQDKEY 164

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157
           E    +++ + +  +   I   M YL       H +L A NCLV    +VK+ADFGL+  
Sbjct: 95  ECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRL 153

Query: 158 KRDAEYT 164
                YT
Sbjct: 154 MTGDTYT 160

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           DI+E     L  + IA++    L+G+ YLH S  R H ++KA N L+     VKLADFG
Sbjct: 103 DILEVHKKPLQEVEIAAICHGALQGLAYLH-SHERIHRDIKAGNILLTEPGTVKLADFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 118 RGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQH 169
           +GM YL       H +L A NC++D  + VK+ADFGL     D EY     H
Sbjct: 109 KGMEYLASKKF-VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 84  ITRAMKKELKIDIMENED---VKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNC 139
           +T  M K   +D +++ +   +KL N+    + A +  GM Y+    + Y H +L+++N 
Sbjct: 78  VTEYMSKGSLLDFLKDGEGRALKLPNL--VDMAAQVAAGMAYIE--RMNYIHRDLRSANI 133

Query: 140 LVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           LV    V K+ADFGL     D EYT      F
Sbjct: 134 LVGDGLVCKIADFGLARLIEDNEYTARQGAKF 165

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 84  ITRAMKKELKIDIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCL 140
           IT  M K   +D +++++     L  +   S  A I  GM ++       H +L+A+N L
Sbjct: 78  ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS--AQIAEGMAFIEQRNY-IHRDLRAANIL 134

Query: 141 VDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           V +  V K+ADFGL     D EYT  +   F
Sbjct: 135 VSASLVCKIADFGLARVIEDNEYTAREGAKF 165

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 105 DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           D  F+A +   IL G+ YLH   +  H ++K SN L++S   VK+ADFG+
Sbjct: 166 DEQFLADVARQILSGIAYLHRRHI-VHRDIKPSNLLINSAKNVKIADFGV 214

Length = 353

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           ++ N++VK     I  ++  +L G+ Y+H + +  H ++KA+N L+    ++KLADFGL
Sbjct: 108 LLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKI-LHRDMKAANILITKDGILKLADFGL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163
           L+  FI   +  ILRG+ Y+H SA   H +LK SN L++    +K+ DFGL   + D + 
Sbjct: 105 LEKQFIQYFLYQILRGLKYVH-SAGVVHRDLKPSNILINENCDLKICDFGLARIQ-DPQM 162

Query: 164 TG 165
           TG
Sbjct: 163 TG 164

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 8e-05
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167
           +  D   GM YL +S    H +L A NCLV    V+K++DFG++  +    YT +D
Sbjct: 98  MSLDAAAGMEYL-ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162
           + +   +      +L G+ YLH   +  H +LKA N LVD+  + K++DFG++  K+  +
Sbjct: 104 RFEEQLVRFFTEQVLEGLAYLHSKGI-LHRDLKADNLLVDADGICKISDFGIS--KKSDD 160

Query: 163 YTGTDQHSFLQHT 175
               DQ+  +Q +
Sbjct: 161 IYDNDQNMSMQGS 173

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 84  ITRAMKKELKIDIMENED---VKLDNMF-IASLVADILRGMLYLHDSALRY-HGNLKASN 138
           +T  M K   +D ++  D   +KL  +  +A+ +AD   GM Y+    + Y H +L+A+N
Sbjct: 78  VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIAD---GMAYIE--RMNYIHRDLRAAN 132

Query: 139 CLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
            LV    V K+ADFGL     D EYT      F
Sbjct: 133 ILVGDNLVCKIADFGLARLIEDNEYTARQGAKF 165

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 35/120 (29%)

Query: 69  GRIFAIKRIPKKS-VDITRAMKKELKID-----------------------IMENEDV-K 103
           G+I+A+K+I      +  + + +ELK                         ++E  D   
Sbjct: 26  GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85

Query: 104 LDNM----------FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           L ++           +A +   IL+G+ YLH      H ++K SN L++S+  VK+ADFG
Sbjct: 86  LADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFG 145

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 40/139 (28%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--DIMENED----VKL------ 104
           Y  +F       G I+AIK I K  + I +    ++    DI+        VKL      
Sbjct: 6   YGRVFLAKKKSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG 64

Query: 105 -DNMFI----------ASL---------------VADILRGMLYLHDSALRYHGNLKASN 138
             N+++          ASL               +A+I+  + YLH + +  H +LK  N
Sbjct: 65  KKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGI-IHRDLKPDN 123

Query: 139 CLVDSRWVVKLADFGLTEF 157
            L+DS   +KL DFGL++ 
Sbjct: 124 ILIDSNGHLKLTDFGLSKV 142

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           I  L+  +LRG+ +LH S    H +LK  N LV S   VK+ADFGL
Sbjct: 109 IKDLMRQLLRGVDFLH-SHRIVHRDLKPQNILVTSDGQVKIADFGL 153

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 84  ITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143
           +T  M+ +L   I+  + +  D+  +   +  ILRG+ YLH SA   H ++K  N LV+S
Sbjct: 82  VTELMQSDLHKIIVSPQPLSSDH--VKVFLYQILRGLKYLH-SAGILHRDIKPGNLLVNS 138

Query: 144 RWVVKLADFGL 154
             V+K+ DFGL
Sbjct: 139 NCVLKICDFGL 149

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           + + +        I S++  IL+G+ ++H     +H +LK  N LV    VVK+ADFGL
Sbjct: 88  MKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF-FHRDLKPENLLVSGPEVVKIADFGL 145

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 84  ITRAMKKELKIDIMENEDVKLDNMFIASLV---ADILRGMLYLHDSALRY-HGNLKASNC 139
           +T  MK    ++ ++    +   + +  L+   A +  GM YL   A  Y H +L A N 
Sbjct: 79  VTELMKYGSLLEYLQGGAGR--ALKLPQLIDMAAQVASGMAYLE--AQNYIHRDLAARNV 134

Query: 140 LVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           LV    + K+ADFGL    ++  Y   +   F
Sbjct: 135 LVGENNICKVADFGLARVIKEDIYEAREGAKF 166

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           + ++E+  V      I S +  +L G+ Y H      H ++K SN L++++  +KLADFG
Sbjct: 103 MGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF-LHRDIKCSNILLNNKGQIKLADFG 161

Query: 154 LTEF 157
           L   
Sbjct: 162 LARL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 84  ITRAMKKELKIDIMENED-VKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           IT  M+    +D ++  + +KL    +  + A I  GM ++      Y H +L+A+N LV
Sbjct: 78  ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE--RKNYIHRDLRAANILV 135

Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
                 K+ADFGL     D EYT  +   F
Sbjct: 136 SETLCCKIADFGLARLIEDNEYTAREGAKF 165

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEYTGTDQ 168
           +LRG+ YLH++ +  H ++K +N L+DS    +++ADFG    +  A+ TG  +
Sbjct: 112 LLRGLSYLHENQI-IHRDVKGANLLIDSTGQRLRIADFG-AAARLAAKGTGAGE 163

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 84  ITRAMKKELKIDIMENEDVKLDNM-FIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K   +  +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 78  VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILV 135

Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 136 GENLVCKVADFGLARLIEDNEYTARQGAKF 165

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           I  L+   LRG+ +LH + +  H +LK  N LV S   VKLADFGL
Sbjct: 110 IKDLMRQFLRGLDFLHANCI-VHRDLKPENILVTSGGQVKLADFGL 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167
           +A  VA+   GM YL +     H +L A N LV    V K+ADFGL    ++  Y  +D
Sbjct: 109 MACQVAE---GMAYLEEQNS-IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD 163

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             LD   I S +  +L+G+ Y H S    H +LK  N L+D    +KLADFGL
Sbjct: 94  TGLDPPLIKSYLYQLLQGIAYCH-SHRVLHRDLKPQNLLIDREGALKLADFGL 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           L    I S +  +L+G+ + H S    H +LK  N L+++  V+KLADFGL
Sbjct: 95  LPESLIKSYLYQLLQGLAFCH-SHGILHRDLKPENLLINTEGVLKLADFGL 144

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 88  MKKELK--IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145
           M K+LK  +D        LD   + S    +L+G+ + H++ +  H +LK  N L++ R 
Sbjct: 80  MDKDLKKYMDTHGVRGA-LDPNTVKSFTYQLLKGIAFCHENRV-LHRDLKPQNLLINKRG 137

Query: 146 VVKLADFGL 154
            +KLADFGL
Sbjct: 138 ELKLADFGL 146

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +L+ + Y+H S    H +LK SN L++S   VKLADFGL
Sbjct: 116 LLKALKYIH-SGNVIHRDLKPSNILLNSDCRVKLADFGL 153

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 116 ILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           I  GM YL  S + Y H +L A N LV+S  V K++DFGL+    D+E T T
Sbjct: 115 IASGMKYL--SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYT 164

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 70  RIFAIKRIPKKSVDITRAMKKELKIDIME-NEDVKLDNMFIASLVADILRGMLYLHDSAL 128
           R++A+    +    IT  M K   +D ++ +E  K+    +    A I  GM Y+     
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124

Query: 129 RYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
             H +L+A+N LV    + K+ADFGL     D EYT  +   F
Sbjct: 125 -IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF 166

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           IL G+ YLH + +  H ++K +N L DS   VKL DFG
Sbjct: 113 ILEGVEYLHSNMI-VHRDIKGANILRDSAGNVKLGDFG 149

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 97  MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156
           +  E  +L    +  +V +   GM YL +S    H +L A NCLV  + V+K++DFG++ 
Sbjct: 84  LRTEGPRLKVKELIQMVENAAAGMEYL-ESKHCIHRDLAARNCLVTEKNVLKISDFGMSR 142

Query: 157 FKRDAEYTGT 166
            + D  Y  T
Sbjct: 143 EEEDGVYAST 152

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT-EF--KRDAEYTGT 166
           +L+G+ YLH   +  H ++K SN L+  +  VKL DFG++ E        +TGT
Sbjct: 114 VLKGLSYLHSRKI-IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGT 166

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 40/121 (33%)

Query: 73  AIKRIPKKSVDITRAMK--KELKI------------------------------DIMENE 100
           AIK+IP      T A +  +ELKI                              D+ME++
Sbjct: 34  AIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESD 93

Query: 101 -------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                  D  L    I   +  +LRG+ Y+H SA   H +LK SN LV+    +++ DFG
Sbjct: 94  LHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH-SANVIHRDLKPSNLLVNEDCELRIGDFG 152

Query: 154 L 154
           +
Sbjct: 153 M 153

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 101 DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
              L +    S +  IL G+ Y+H SA   H +LK  N LV++   +K+ DFGL
Sbjct: 99  GQPLTDAHFQSFIYQILCGLKYIH-SANVLHRDLKPGNLLVNADCELKICDFGL 151

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 116 ILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTE 156
           I  GM YLH  +  Y H +L A N L+D+  +VK+ DFGL +
Sbjct: 116 ICEGMAYLH--SQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 17/48 (35%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156
           + + V  IL+G+ YLH+  +  H ++K +N LVD++  +K++DFG+++
Sbjct: 108 VRNFVRQILKGLNYLHNRGI-IHRDIKGANILVDNKGGIKISDFGISK 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           +L+G+ YLH+     H ++K SN LV+SR  +KL DFG
Sbjct: 109 VLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFG 146

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           +LRG+ YL +     H ++K SN LV+SR  +KL DFG++
Sbjct: 108 VLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 84  ITRAMKKELKIDIMENEDV-----KLDNMFIASLVADILRG----MLYLHDSALRYHGNL 134
           +T++    +  + MEN  +     K D  F    +  +LRG    M YL D     H +L
Sbjct: 74  VTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDL 132

Query: 135 KASNCLVDSRWVVKLADFGLTEFKRD---AEYTGT 166
            A N LV+S  V K++DFGL+    D   A YT  
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           +LRG+ YL +     H ++K SN LV+SR  +KL DFG++
Sbjct: 112 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 151

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           I +GM YL +  L  H +L A N LV +   VK+ DFGL 
Sbjct: 118 IAKGMSYLEEKRL-VHRDLAARNVLVKTPQHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 85  TRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR 144
           +R ++ +    I  +    L +  +    AD+ RGM YL       H +L A N LV   
Sbjct: 102 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGEN 160

Query: 145 WVVKLADFGLT 155
           +V K+ADFGL+
Sbjct: 161 YVAKIADFGLS 171

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++E     L  + IA++    L+G+ YLH   +  H ++KA N L+     VKLADFG
Sbjct: 109 DLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFG 166

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            IM   +  L    I  +   +L  + +LH   +  H +LKA N L+     VKLADFG+
Sbjct: 91  SIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV-IHRDLKAGNILLTLDGDVKLADFGV 149

Query: 155 TEFKRDAEYTGTDQ--HSFLQHTY 176
           +     A+   T Q   +F+   Y
Sbjct: 150 S-----AKNKSTLQKRDTFIGTPY 168

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156
           L   +    +A+++ G+  LH   + +  ++K  N L+D    +KL DFGL+ 
Sbjct: 94  LPEDWAKQYIAEVVLGVEDLHQRGIIHR-DIKPENLLIDQTGHLKLTDFGLSR 145

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 41/136 (30%)

Query: 56  RYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELK--IDIMEN-------------- 99
            +  ++T + +  G + A+K I     D      KE+   + ++E               
Sbjct: 12  TFGKVYTAVNLDTGELMAVKEIR--IQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV 69

Query: 100 --EDV--------------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKAS 137
             E V                     LD   I      +L G+ YLH   +  H ++K +
Sbjct: 70  HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI-VHRDIKPA 128

Query: 138 NCLVDSRWVVKLADFG 153
           N  +D   V+KL DFG
Sbjct: 129 NIFLDHNGVIKLGDFG 144

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 8/64 (12%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +IM   +VK+        +  ILRG+ Y H   +  H +LK  N L++ R  +KLADFGL
Sbjct: 99  NIMSMHNVKI-------FLYQILRGLAYCHRRKV-LHRDLKPQNLLINERGELKLADFGL 150

Query: 155 TEFK 158
              K
Sbjct: 151 ARAK 154

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGL 154
           + SL+  IL G+ YLH + +  H +LK +N LV      R VVK+ D GL
Sbjct: 110 VKSLLWQILNGVHYLHSNWV-LHRDLKPANILVMGEGPERGVVKIGDLGL 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHT 175
           +LRG+ Y+H SA   H +LK SN L+++   +K+ DFGL         T +++  F+   
Sbjct: 117 LLRGLKYIH-SANVLHRDLKPSNLLLNANCDLKICDFGLAR-------TTSEKGDFMT-E 167

Query: 176 YHVNR 180
           Y V R
Sbjct: 168 YVVTR 172

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++E     L  + IA++    L+G+ YLH   +  H ++KA N L+     VKLADFG
Sbjct: 113 DLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFG 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT 155
            +   I  GM YL  S+L + H +L   NCLV   + +K+ADFG++
Sbjct: 134 FMATQIASGMKYL--SSLNFVHRDLATRNCLVGKNYTIKIADFGMS 177

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157
           + +++K   +   +L  D   GM YL +S    H +L A NCLV    V+K++DFG++  
Sbjct: 86  KKDELKTKQLVKFAL--DAAAGMAYL-ESKNCIHRDLAARNCLVGENNVLKISDFGMSRQ 142

Query: 158 KRDAEYTGT 166
           + D  Y+ +
Sbjct: 143 EDDGIYSSS 151

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           ILRG+ Y+H SA   H +LK SN L+++   +K+ DFGL
Sbjct: 115 ILRGLKYIH-SANVLHRDLKPSNLLLNTNCDLKICDFGL 152

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++E     L  + IA++    L+G+ YLH   +  H ++KA N L+    +VKL DFG
Sbjct: 103 DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 13/89 (14%)

Query: 77  IPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKA 136
           +P    D+ + MK E           KL    I  LV  +L+G+ Y+H + +  H +LK 
Sbjct: 99  MPFMGTDLGKLMKHE-----------KLSEDRIQFLVYQMLKGLKYIHAAGI-IHRDLKP 146

Query: 137 SNCLVDSRWVVKLADFGLTEFKRDAEYTG 165
            N  V+    +K+ DFGL   + D+E TG
Sbjct: 147 GNLAVNEDCELKILDFGLAR-QTDSEMTG 174

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 16/97 (16%)

Query: 84  ITRAMKKELKIDIMENE--DVKL---DNMFIASLVADILRG----MLYLHDSALRY-HGN 133
           +T++    +  + MEN   D  L   D  F    +  +LRG    M YL  S + Y H +
Sbjct: 74  VTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL--SEMNYVHRD 131

Query: 134 LKASNCLVDSRWVVKLADFGLTEF----KRDAEYTGT 166
           L A N LV+S  V K++DFGL+ F      D  YT +
Sbjct: 132 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSS 168

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162
           KL +  +  L+  ILRG+ Y+H SA   H +LK SN  V+    +K+ DFGL     D E
Sbjct: 116 KLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-E 173

Query: 163 YTG 165
            TG
Sbjct: 174 MTG 176

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162
           KL +  +  L+  +LRG+ Y+H + +  H +LK SN  V+    +++ DFGL   + D E
Sbjct: 114 KLSDEHVQFLIYQLLRGLKYIHSAGI-IHRDLKPSNVAVNEDCELRILDFGLAR-QADDE 171

Query: 163 YTG 165
            TG
Sbjct: 172 MTG 174

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163
           L    +   + DI  GM YL   +   H +L A NC+++    V +ADFGL++   + +Y
Sbjct: 109 LPTQMLVKFMTDIASGMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY 167

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 83  DITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142
           D+   ++   K ++M  +   L  M       +I  G+L+LH +    H +L   NCL+ 
Sbjct: 81  DLKGYLRSCRKAELMTPDPTTLQRM-----ACEIALGLLHLHKNNF-IHSDLALRNCLLT 134

Query: 143 SRWVVKLADFGLTEFK-RDAEYTGTDQ 168
           +   VK+ D+GL+  K ++  Y   DQ
Sbjct: 135 ADLTVKIGDYGLSHNKYKEDYYVTPDQ 161

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           DI +     L  + IA +  + L+G+ YLH++  + H ++K +N L+     VKLADFG
Sbjct: 89  DIYQVTRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFG 146

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 37.9 bits (89), Expect = 0.004
 Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 51/142 (35%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKIDIMENE-DV--KLDNMFIASL------------- 112
           G+++A+K + KK       + K  +++    E ++  ++++ FI  L             
Sbjct: 18  GKLYAMKVLKKKK------IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLV 71

Query: 113 ---------------------------VADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145
                                       A+I+  + YLH   + Y  +LK  N L+D+  
Sbjct: 72  LEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIY-RDLKPENILLDADG 130

Query: 146 VVKLADFGL-TEFKRDAEYTGT 166
            +KL DFGL  E   +   T T
Sbjct: 131 HIKLTDFGLAKELSSEGSRTNT 152

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	392
KOG1023|consensus	484		100.0
KOG4171|consensus	671		100.0
smart00044	194	CYCc Adenylyl- / guanylyl cyclase, catalytic domai	99.96
PF00211	184	Guanylate_cyc: Adenylate and Guanylate cyclase cat	99.96
COG2114	227	CyaA Adenylate cyclase, family 3 (some proteins co	99.95
KOG0593|consensus	396		99.94
KOG0598|consensus	357		99.94
KOG0615|consensus	475		99.94
KOG0575|consensus	592		99.94
KOG0659|consensus	318		99.94
KOG0595|consensus	429		99.94
KOG3619|consensus	867		99.93
KOG0600|consensus	560		99.93
KOG0592|consensus	604		99.93
KOG3618|consensus	1318		99.93
KOG0581|consensus	364		99.92
KOG0661|consensus	538		99.92
KOG0616|consensus	355		99.92
KOG3619|consensus	867		99.92
KOG0660|consensus	359		99.92
cd07302	177	CHD cyclase homology domain. Catalytic domains of	99.92
KOG0585|consensus	576		99.91
KOG0663|consensus	419		99.91
KOG0594|consensus	323		99.91
KOG0605|consensus	550		99.9
KOG0658|consensus	364		99.9
KOG0597|consensus	808		99.9
KOG0611|consensus	668		99.89
KOG0583|consensus	370		99.89
KOG0694|consensus	694		99.89
KOG4236|consensus	888		99.89
KOG0591|consensus	375		99.89
KOG0667|consensus	586		99.89
KOG0580|consensus	281		99.89
KOG0197|consensus	468		99.88
KOG3618|consensus	1318		99.87
KOG0664|consensus	449		99.87
KOG0198|consensus	313		99.87
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.86
KOG2345|consensus	302		99.86
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.86
KOG0578|consensus	550		99.86
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.86
KOG0662|consensus	292		99.86
KOG0588|consensus	786		99.85
KOG0192|consensus	362		99.85
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.85
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.85
KOG0193|consensus	678		99.85
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.85
KOG4717|consensus	864		99.85
KOG0983|consensus	391		99.85
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.85
KOG4250|consensus	732		99.85
KOG0033|consensus	355		99.84
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.84
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.84
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.84
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.84
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.84
KOG0986|consensus	591		99.84
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.84
KOG0584|consensus	632		99.84
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.84
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.84
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.84
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.84
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.84
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.84
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.84
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.84
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.83
KOG0604|consensus	400		99.83
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.83
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.83
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.83
KOG0577|consensus	948		99.83
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.83
KOG0984|consensus	282		99.83
KOG0201|consensus	467		99.83
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
KOG1187|consensus	361		99.83
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.83
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.83
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.83
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.83
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.83
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.83
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.83
KOG0599|consensus	411		99.83
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.83
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.83
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.82
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.82
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.82
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.82
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.82
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.82
KOG1035|consensus	1351		99.82
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.82
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.82
PTZ00283	496	serine/threonine protein kinase; Provisional	99.82
KOG0194|consensus	474		99.82
KOG1989|consensus	738		99.82
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.82
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.82
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.82
KOG0586|consensus	596		99.81
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.81
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.81
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.81
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.81
KOG0589|consensus	426		99.81
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.81
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.81
KOG1006|consensus	361		99.81
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.81
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.81
KOG0032|consensus	382		99.81
PTZ00284	467	protein kinase; Provisional	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.81
KOG0607|consensus	463		99.81
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.8
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.8
PHA03212	391	serine/threonine kinase US3; Provisional	99.8
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.8
PHA02882	294	putative serine/threonine kinase; Provisional	99.8
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.8
KOG0574|consensus	502		99.8
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
KOG0690|consensus	516		99.79
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.79
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.79
KOG0668|consensus	338		99.79
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.79
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.79
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.79
PHA03211	461	serine/threonine kinase US3; Provisional	99.79
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.79
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.79
KOG0612|consensus	1317		99.79
KOG1152|consensus	772		99.79
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.79
KOG0582|consensus	516		99.79
KOG0196|consensus	996		99.79
KOG1026|consensus	774		99.79
KOG4279|consensus	1226		99.78
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.78
KOG0666|consensus	438		99.78
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.78
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.78
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.78
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.78
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.78
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.78
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.78
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.78
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.78
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.77
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.77
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
KOG0671|consensus	415		99.77
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.77
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.77
KOG0610|consensus	459		99.77
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.77
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.77
PHA02988	283	hypothetical protein; Provisional	99.77
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.77
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.77
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.77
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.77
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.77
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.76
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.76
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.76
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.76
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.76
PHA03207	392	serine/threonine kinase US3; Provisional	99.76
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.76
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.76
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.76
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.76
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.75
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.75
KOG4721|consensus	904		99.75
KOG0608|consensus	1034		99.75
KOG0669|consensus	376		99.75
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.75
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.75
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.75
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.75
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.75
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.75
KOG0579|consensus	1187		99.75
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.75
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.75
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.75
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.75
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.75
KOG0614|consensus	732		99.75
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.75
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.75
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.75
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.75
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.75
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.75
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.75
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.75
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.75
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.75
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.75
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.75
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.75
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.74
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.74
KOG1151|consensus	775		99.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.74
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.74
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.74
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.74
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.74
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.74
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.74
KOG1094|consensus	807		99.74
PRK09188	365	serine/threonine protein kinase; Provisional	99.74
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.74
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.74
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.74
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.74
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.74
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.74
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.74
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.74
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.74
KOG3653|consensus	534		99.74
KOG1345|consensus	378		99.74
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.74
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.74
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.74
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.74
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.74
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.74
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.73
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.73
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.73
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.73
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.73
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.73
KOG1095|consensus	1025		99.73
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.73
KOG0696|consensus	683		99.73
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.73
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.73
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.73
KOG0670|consensus	752		99.73
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.73
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.73
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.73
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.73
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.73
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.73
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.73
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.73
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.73
KOG1025|consensus	1177		99.73
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.73
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.73
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.73
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.73
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.73
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.73
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.73
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.73
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.73
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.73
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.73
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.73
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.73
KOG2052|consensus	513		99.73
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.73
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.72
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.72
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.72
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.72
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.72
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.72
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.72
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.72
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.72
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.72
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.72
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.72
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.72
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.72
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.72
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.72
KOG0199|consensus	1039		99.72
KOG0603|consensus	612		99.72
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.72
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.72
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.72
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.72
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.72
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.72
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.71
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.71
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.71
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.71
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.71
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.71
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.71
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.71
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.71
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.71
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.71
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.71
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.71
PLN00009	294	cyclin-dependent kinase A; Provisional	99.71
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.71
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.71
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.71
KOG4645|consensus	1509		99.71
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.71
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.71
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.71
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.7
KOG4278|consensus	1157		99.7
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.7
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.7
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.7
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.7
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.7
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.7
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.7
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.7
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.7
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.7
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.7
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.7
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.7
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.7
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.7
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.69
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.69
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.69
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.69
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.69
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.69
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.69
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.69
KOG4257|consensus	974		99.69
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.69
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.69
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.69
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.69
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.69
PHA03210	501	serine/threonine kinase US3; Provisional	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.69
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.69
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.69
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.68
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.68
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.68
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.68
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.68
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.68
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.67
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.67
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.67
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.67
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.67
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.67
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.67
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.67
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.67
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.67
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.67
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.67
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.67
KOG0596|consensus	677		99.66
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.66
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.65
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.65
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.65
KOG0695|consensus	593		99.65
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.65
KOG0665|consensus	369		99.64
KOG1163|consensus	341		99.64
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.63
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.63
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.62
KOG1027|consensus	903		99.62
KOG1165|consensus	449		99.6
smart00090	237	RIO RIO-like kinase.	99.59
KOG0587|consensus	953		99.58
KOG0200|consensus	609		99.58
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.58
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.57
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.55
KOG1167|consensus	418		99.55
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.54
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.52
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.49
PRK10345	210	hypothetical protein; Provisional	99.48
KOG0576|consensus	829		99.47
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.47
KOG1164|consensus	322		99.46
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.44
PRK12274	218	serine/threonine protein kinase; Provisional	99.42
PRK14879	211	serine/threonine protein kinase; Provisional	99.4
KOG1290|consensus	590		99.39
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.38
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.37
KOG1024|consensus	563		99.34
PLN00181	793	protein SPA1-RELATED; Provisional	99.28
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.25
KOG1166|consensus	974		99.24
cd07556	133	Nucleotidyl_cyc_III Class III nucleotidyl cyclases	99.21
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.2
KOG0590|consensus	601		99.16
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.12
KOG4158|consensus	598		99.09
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.09
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.07
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.06
KOG0606|consensus	1205		99.04
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.98
KOG0603|consensus	612		98.98
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.9
KOG1240|consensus	1431		98.85
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.74
KOG1033|consensus	516		98.69
KOG3087|consensus	229		98.48
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.43
KOG0590|consensus	601		98.33
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.15
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.98
KOG0601|consensus	524		97.95
KOG1243|consensus	690		97.91
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.91
KOG0601|consensus	524		97.89
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.82
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.7
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.67
PRK09902	216	hypothetical protein; Provisional	97.5
KOG1266|consensus	458		97.39
KOG0195|consensus	448		97.15
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.12
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.11
KOG1235|consensus	538		96.93
KOG3741|consensus	655		96.85
KOG2137|consensus	700		96.54
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.4
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.36
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.69
KOG1035|consensus	1351		95.66
COG4248	637	Uncharacterized protein with protein kinase and he	95.59
PF01636	239	APH: Phosphotransferase enzyme family This family	95.41
KOG0578|consensus	550		95.24
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	95.07
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.7
PRK05231	319	homoserine kinase; Provisional	94.53
PF05165	246	GGDN: GGDN family; InterPro: IPR007839 GTP cyclohy	94.18
KOG0606|consensus	1205		92.99
KOG0591|consensus	375		92.83
KOG0575|consensus	592		92.82
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	92.53
KOG0193|consensus	678		92.27
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.24
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	92.11
KOG0582|consensus	516		92.04
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	91.62
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.58
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.38
PHA03111	444	Ser/Thr kinase; Provisional	91.3
PRK10271	188	thiK thiamine kinase; Provisional	91.25
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	91.13
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.12
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	90.62
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	90.46
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	90.45
KOG0192|consensus	362		90.38
PRK10245	366	adrA diguanylate cyclase AdrA; Provisional	89.91
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	89.86
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	89.58
KOG0615|consensus	475		89.39

>KOG1023|consensus

Probab=100.00  E-value=4.1e-40  Score=317.94  Aligned_cols=264  Identities=62%  Similarity=0.985  Sum_probs=226.8

Q ss_pred             HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc--------------
Q psy6828          96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--------------  161 (392)
Q Consensus        96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~--------------  161 (392)
                      .+.+...++++.....++++|+.||.|+|+..+..|+-+++.|++++....+|++|||+.......              
T Consensus        37 ~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l  116 (484)
T KOG1023|consen   37 ILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL  116 (484)
T ss_pred             HHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHh
Confidence            344555679999999999999999999998877689999999999999999999999998766310              


Q ss_pred             ------------------ccccccccceeeeeee--ccCCCCcc-----c----------------------c----c--
Q psy6828         162 ------------------EYTGTDQHSFLQHTYH--VNRAGSTE-----S----------------------L----H--  188 (392)
Q Consensus       162 ------------------~~~~~d~~s~g~~~~~--~~~~~~~~-----~----------------------~----d--  188 (392)
                                        .....|+||||+++||  .+..++..     .                      .    +  
T Consensus       117 w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l  196 (484)
T KOG1023|consen  117 WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPEL  196 (484)
T ss_pred             ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHH
Confidence                              0112499999999999  11110000     0                      0    0  


Q ss_pred             ------c-------------------------------------------------------------cccchhhhccCC
Q psy6828         189 ------C-------------------------------------------------------------KCDEALLFEMLP  201 (392)
Q Consensus       189 ------~-------------------------------------------------------------~~~~~lL~~~lp  201 (392)
                            |                                                             .+...++.+++|
T Consensus       197 ~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~e~~k~d~LL~~mLP  276 (484)
T KOG1023|consen  197 LLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLESYADNLEKLVDERTAELEEEKKKTDTLLGQMLP  276 (484)
T ss_pred             HHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                  0                                                             344568999999


Q ss_pred             HHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCC
Q psy6828         202 RSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP  281 (392)
Q Consensus       202 ~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~  281 (392)
                      +.+++.++.+....++.+..+|++|+|+++||.++...+|-+++.+||++|+.|+.++++|++++++++||+||.+    
T Consensus       277 ~~VA~~lk~G~~v~pe~~~~vti~fsDiv~fT~l~~~~~P~~vv~~lNdlyt~Fd~ii~~~d~yKVetiGDaYmvv----  352 (484)
T KOG1023|consen  277 KSVAESLKLGKTVDPESFDSVTIYFSDIVGFTVLSSNSTPIQVVTLLNDLYTTFDRIIDKHDVYKVETIGDAYMVV----  352 (484)
T ss_pred             HHHhhHhhcCCcCCccccCceeeeeHHHHHHHHHHhcCCCceeeeeccchHHhhhhcccccCCeeEeccCcceeec----
Confidence            9999999999999999999999999999999999999999999999999999999999999999999888888544    


Q ss_pred             cCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEe
Q psy6828         282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAG  361 (392)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g  361 (392)
                                                 +|+|.+....|+..++.+++.++..+..+.....++.++++|||+|+|++++|
T Consensus       353 ---------------------------Sglp~~n~~~H~~eia~msl~~~~~~~~f~i~H~P~~~l~iRig~~sg~~~ag  405 (484)
T KOG1023|consen  353 ---------------------------SGLPIRNGYRHAREIASMALGLRSFLESFSLPHRPWEKLRLRIGFHSGPVVAG  405 (484)
T ss_pred             ---------------------------ccCceecHhHHHHHHHHHHHHHHHHHhccCCCCCCchhhheeeccccCCceec
Confidence                                       55555555669999999999999999999998889999999999999999999


Q ss_pred             eeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         362 VVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       362 ~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      ++|.+.+.|+.+|||||+||||||.++ ++
T Consensus       406 Vvgl~mPRYclFgDtvn~AsrMes~G~-~~  434 (484)
T KOG1023|consen  406 VVGLKMPRYCLFGDTVNTASRMESNGK-LM  434 (484)
T ss_pred             ccccCCCcccchhhHHHHHhhhhhcCC-eE
Confidence            999999999999999999999999998 53

>KOG4171|consensus

Probab=100.00  E-value=7.3e-36  Score=291.08  Aligned_cols=169  Identities=61%  Similarity=0.961  Sum_probs=155.0

Q ss_pred             cccchhhhccCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEee
Q psy6828         190 KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVET  269 (392)
Q Consensus       190 ~~~~~lL~~~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~  269 (392)
                      ++...+|++++|+.++++++.+......++.++|++|+||++|+.++..++|-+++.+||++|.+||+++.-|+++++++
T Consensus       411 kkTd~LLy~mlP~~VA~qLr~g~~v~a~~f~~vTilFsdIv~Ft~ic~~ctp~~vV~~LN~lyt~fD~~i~~~~VYKVET  490 (671)
T KOG4171|consen  411 KKTDTLLYSMLPRSVAQQLRQGESVDAKEFDDVTILFSDIVGFTAICSQCTPMQVVNMLNELYTRFDRIIDTHDVYKVET  490 (671)
T ss_pred             hhHHHHHHHhCCHHHHHHHHcCCCcCccccCceEEEEeccchHHhHhhccCcHHHHHHHHHHHHHHHHhhcccCeEEEee
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceE
Q psy6828         270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL  349 (392)
Q Consensus       270 ~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~  349 (392)
                      |||+||++.|+|                               ... +.||..++.+|+.|+...+++-... ...++.+
T Consensus       491 IGDaYm~vsG~P-------------------------------~~~-~~HAe~i~~~AL~Mm~~ak~v~~p~-~~~pi~i  537 (671)
T KOG4171|consen  491 IGDAYMVVSGLP-------------------------------DAS-DYHAEHIADLALGMMEEAKEVVSPV-TGEPIQI  537 (671)
T ss_pred             ccchheeecCCC-------------------------------CCC-hhHHHHHHHHHHHHHHHhhhhcCcC-CCCceEE
Confidence            988886666665                               333 4699999999999999999875332 4679999


Q ss_pred             EEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       350 ~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      |||||+|+|++||||.+.|.|+++|||||+||||||.+.||.
T Consensus       538 RiGIHsG~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p~K  579 (671)
T KOG4171|consen  538 RIGIHSGPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVPGK  579 (671)
T ss_pred             EEEeccCCeeeeeecccccceeecCCchhhhhhhhcCCCCce
Confidence            999999999999999999999999999999999999999985

>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain

Probab=99.96  E-value=9e-29  Score=217.84  Aligned_cols=170  Identities=58%  Similarity=0.896  Sum_probs=153.1

Q ss_pred             cccchhhhccCCHHHHHHhhcCC-CccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEe
Q psy6828         190 KCDEALLFEMLPRSVAEQLRRGT-SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVE  268 (392)
Q Consensus       190 ~~~~~lL~~~lp~~v~~~l~~~~-~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~  268 (392)
                      +...++|.+++|+.+.+++..+. ....+...+++++|+||++||.+++..+|+++.++|+.+++.+.+++.+|+|++++
T Consensus         4 ~~~~~ll~~~lP~~v~~~l~~g~~~~~~~~~~~~tvlf~di~g~t~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~v~~   83 (194)
T smart00044        4 RKTDRLLDQLLPASVAESLKRGGSPVPAESYDNVTILFTDIVGFTTLSSEATPEQVVTLLNDLYSRFDRIIDRHGGYKVK   83 (194)
T ss_pred             HHHHHHHHHhCCHHHHHHHHhCCCCccccccCeEEEEEeEhhhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence            45678999999999999999876 55667789999999999999999999999999999999999999999999999999


Q ss_pred             eeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCce
Q psy6828         269 TIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLK  348 (392)
Q Consensus       269 ~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~  348 (392)
                      ++||++|++||.|..                               ..++|+.+|+.+|+++++.+.+++... ...+++
T Consensus        84 ~~Gd~~l~~F~~~~~-------------------------------~~~~~a~~a~~~al~l~~~~~~~~~~~-~~~~l~  131 (194)
T smart00044       84 TIGDAYMVVSGLPTE-------------------------------ALVDHAELAADEALDMVESLKTVLSQH-RGNGLR  131 (194)
T ss_pred             EeCCEEEEEECCCCC-------------------------------cchHHHHHHHHHHHHHHHHHHHHHhhc-cCCCee
Confidence            999999888887742                               113699999999999999999886433 367899


Q ss_pred             EEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         349 LRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       349 ~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      +|||||+|+|++|.+|..+++||++|++||+|+||++.+++|.
T Consensus       132 ~riGih~G~v~~~~~g~~~~~~~~~G~~vn~AarL~~~a~~g~  174 (194)
T smart00044      132 VRIGIHTGPVVAGVVGITMPRYCLFGDTVNLASRMESVGDPGQ  174 (194)
T ss_pred             EEEEEeccceEEEecCCCCceeEEeChHHHHHHHHHhcCCCCe
Confidence            9999999999999999988899999999999999999999884

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.

>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4

Probab=99.96  E-value=1.5e-28  Score=214.60  Aligned_cols=143  Identities=41%  Similarity=0.657  Sum_probs=128.2

Q ss_pred             cccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccc
Q psy6828         215 EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYD  294 (392)
Q Consensus       215 ~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~  294 (392)
                      +.+.+++++++|.||++||.+++..+|+++.++||+++..+++++.+|+|.+++++||++|++||.|.            
T Consensus         2 ~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~Gd~~~~~f~~~~------------   69 (184)
T PF00211_consen    2 YSEQYRNVTVLFADIVGFTDLTEQLDPEELVRLLNDFFSSLDRIVKQHGGEIIKFIGDGVMAVFGLPE------------   69 (184)
T ss_dssp             EEEEEEEEEEEEEEETTHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEETTEEEEEESSSS------------
T ss_pred             CccccCeEEEEEEEecCcHHHHHhCCchhHHHHHHHHHHHhhhccccccccccccccceeEEEecccc------------
Confidence            35667899999999999999999999999999999999999999999999999999999988888762            


Q ss_pred             ccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeec
Q psy6828         295 VYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFG  374 (392)
Q Consensus       295 ~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G  374 (392)
                                          ...+++.+|+++|+++.+.+++++...  ..++++|||||+|+|++|++|..+++|++||
T Consensus        70 --------------------~~~~~~~~a~~~al~~~~~~~~~~~~~--~~~~~~rIGI~~G~v~~g~~G~~~~~~~v~G  127 (184)
T PF00211_consen   70 --------------------PDEDAAERAVQFALALLEALERLNKES--GPPLSVRIGIHTGPVVVGVVGSRRPEYDVFG  127 (184)
T ss_dssp             --------------------CHCHHHHHHHHHHHHHHHHHHHHHHHH--HSS-EEEEEEEEEEEEEEEEESSSEEEEEES
T ss_pred             --------------------ccccccccccccccchhhccccccccc--ceeeeeeccccccccccccccCcccceeeee
Confidence                                224689999999999999998876543  4689999999999999999996666999999


Q ss_pred             chHHHHHhhhhcCCCCC
Q psy6828         375 DTVNTASRMESTGEDVV  391 (392)
Q Consensus       375 ~~Vn~AsRle~~~~~g~  391 (392)
                      ++||+|+||+++|.||.
T Consensus       128 ~~vn~Aarl~~~a~~~~  144 (184)
T PF00211_consen  128 DAVNIAARLESLAPPGQ  144 (184)
T ss_dssp             HHHHHHHHHHHTSSTTS
T ss_pred             hhhhhhHHHHHhhcccc
Confidence            99999999999999974

6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....

>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-27  Score=211.88  Aligned_cols=130  Identities=33%  Similarity=0.479  Sum_probs=109.5

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccccee
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVE  299 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~  299 (392)
                      +.++++|+|+++||.+++..+|+.+.+++|.||+.+...+.+|+|.++|++||++||.||.|..                
T Consensus        45 ~~vtilfaDi~g~T~l~~~~~~~~~~~ll~~~~~~~~~~v~~~gG~v~k~iGD~~la~F~~p~~----------------  108 (227)
T COG2114          45 RRVTLLFADIVGSTELSESLGDEALVELLNLYFDAVAEVVARHGGRVVKFIGDGFLAVFGRPSP----------------  108 (227)
T ss_pred             ceEEEEEEeeccchHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecceEEEEeCCCCC----------------
Confidence            7899999999999999999999999999999999999999999999999999999888888732                


Q ss_pred             eccceeEEEeCCCCCCChhhHHHHHH-HHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHH
Q psy6828         300 TIGDAYMVVSGLPIRNGEQHAGEIAS-MSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVN  378 (392)
Q Consensus       300 ~~~d~~~~~~g~~~~~~~~~a~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn  378 (392)
                                     ..  +|.+|+. +++++.+...+++    ... +++|||||+|+|++|++|+    ||++|++||
T Consensus       109 ---------------~~--~A~~~a~~~~~~~~~~~~~~~----~~~-l~~riGi~~G~vv~~~~g~----~~~~G~~VN  162 (227)
T COG2114         109 ---------------LE--DAVACALDLQLALRNPLARLR----RES-LRVRIGIHTGEVVVGNTGG----YTVVGSAVN  162 (227)
T ss_pred             ---------------cH--HHHHHHHHHHHHHHHHHhhcc----CcC-eeEEEEEEeecEEEEeecC----eeEechHhH
Confidence                           11  3333333 3445555444432    112 9999999999999999998    999999999


Q ss_pred             HHHhhhhcCCCCC
Q psy6828         379 TASRMESTGEDVV  391 (392)
Q Consensus       379 ~AsRle~~~~~g~  391 (392)
                      +|||||++++||.
T Consensus       163 ~AaRLe~~a~~g~  175 (227)
T COG2114         163 QAARLESLAKPGQ  175 (227)
T ss_pred             HHHHHHHhcCCCe
Confidence            9999999999873

>KOG0593|consensus

Probab=99.94  E-value=2e-27  Score=211.03  Aligned_cols=158  Identities=16%  Similarity=0.188  Sum_probs=121.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |.....+|+|+||+||+|+++.||+.||||++....-  ...+-..+|+..                             
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence            3345679999999999999999999999999965432  334445666665                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-ccc----
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-EYT----  164 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~----  164 (392)
                           +-++.....++++.+..+++|++.|+.|+|++++ |||||||+|||++.+|.+||||||+|+.+... ...    
T Consensus        84 dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~-IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYV  162 (396)
T KOG0593|consen   84 DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNC-IHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYV  162 (396)
T ss_pred             chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCe-ecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhh
Confidence                 3333333368999999999999999999999999 99999999999999999999999999987632 211    


Q ss_pred             -------------------cccccceeeeeee--ccCCCCcccccccc---cchhhhccCCHHH
Q psy6828         165 -------------------GTDQHSFLQHTYH--VNRAGSTESLHCKC---DEALLFEMLPRSV  204 (392)
Q Consensus       165 -------------------~~d~~s~g~~~~~--~~~~~~~~~~d~~~---~~~lL~~~lp~~v  204 (392)
                                         ..|+|++||++-|  ..+..+.++.|..+   ....|..++|++.
T Consensus       163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq  226 (396)
T KOG0593|consen  163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQ  226 (396)
T ss_pred             hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHH
Confidence                               2299999999988  44555555556543   3445566666553

>KOG0598|consensus

Probab=99.94  E-value=2.1e-27  Score=216.72  Aligned_cols=152  Identities=23%  Similarity=0.286  Sum_probs=125.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      +...+.+|+|+||+||+++.+.+++.||+|+++|...   ...+...+|..+                          +|
T Consensus        27 F~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~  106 (357)
T KOG0598|consen   27 FEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDY  106 (357)
T ss_pred             eeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEec
Confidence            4456789999999999999999999999999998765   345677888887                          33


Q ss_pred             hhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          97 MEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        97 l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                      +.+        .++.|++..++.|+.+|+.||.|||+++| |||||||+||||+.+|+++|+|||+|+........  +-
T Consensus       107 ~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gI-iyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~--t~  183 (357)
T KOG0598|consen  107 LNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGI-IYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA--TR  183 (357)
T ss_pred             cCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCe-eeccCCHHHeeecCCCcEEEeccccchhcccCCCc--cc
Confidence            333        33479999999999999999999999999 99999999999999999999999999965433211  11


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      .-.|++.|++||    .++...+|+|+.+.+++.|+
T Consensus       184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML  219 (357)
T KOG0598|consen  184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEML  219 (357)
T ss_pred             cccCCccccChHHHhcCCCCcccchHhHHHHHHHHh
Confidence            246888888776    67778888999998888887

>KOG0615|consensus

Probab=99.94  E-value=1.5e-27  Score=219.64  Aligned_cols=135  Identities=22%  Similarity=0.324  Sum_probs=111.8

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-------HHHHHHHHHHH--------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-------ITRAMKKELKI--------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-------~~~~~~~E~~~--------------------   94 (392)
                      ..+.|+..+.||+|+||.|.+|+++.+|+.||||+++++...       ....+.+|+++                    
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            457788999999999999999999999999999999876542       22345688888                    


Q ss_pred             ------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchh
Q psy6828          95 ------DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEF  157 (392)
Q Consensus        95 ------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~  157 (392)
                            +|++.+        ++.+.+..-+.+++|++.|+.|||+.|| +||||||+|||+..+   ..+||+|||+|++
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI-~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGI-IHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCc-ccccCCcceEEeccCCcceEEEecccchhhc
Confidence                  223322        2268888889999999999999999999 999999999999766   7899999999998


Q ss_pred             ccccccccc-------------------------cccceeeeeee
Q psy6828         158 KRDAEYTGT-------------------------DQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~~~~~-------------------------d~~s~g~~~~~  177 (392)
                      ......+.+                         |+||+|+++|-
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfv  373 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFV  373 (475)
T ss_pred             cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEE
Confidence            755443221                         99999999998

>KOG0575|consensus

Probab=99.94  E-value=2.4e-27  Score=228.36  Aligned_cols=132  Identities=21%  Similarity=0.312  Sum_probs=116.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      .+|...+-||+|||+.||.+++..+|+.||+|++.+..+   ...+.+.+|++|                          
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            778889999999999999999999999999999998644   578899999999                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-ccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-EYT  164 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~  164 (392)
                               ++++ ....++|.+++.+++||+.||.|||+++| +|||||..|++|+++.++||+|||||..+... +..
T Consensus        98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~I-iHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGI-IHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCc-eecccchhheeecCcCcEEecccceeeeecCccccc
Confidence                     5555 33479999999999999999999999999 99999999999999999999999999987643 211


Q ss_pred             c----------------------ccccceeeeeee
Q psy6828         165 G----------------------TDQHSFLQHTYH  177 (392)
Q Consensus       165 ~----------------------~d~~s~g~~~~~  177 (392)
                      .                      .|+||+||++|-
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYt  210 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYT  210 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHh
Confidence            1                      199999999998

>KOG0659|consensus

Probab=99.94  E-value=1e-26  Score=203.06  Aligned_cols=116  Identities=26%  Similarity=0.395  Sum_probs=97.0

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~----------------------------   94 (392)
                      +|...+.+|+|.||+||+|++..+|+.||||++......  ......+|+..                            
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            456677899999999999999999999999999765432  12234444444                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                            ..++..+..++..++..|+.++++|+.|||++.| +||||||.|+|++++|.+||+|||+++...+.
T Consensus        83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~I-lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWI-LHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhh-hcccCCccceEEcCCCcEEeecccchhccCCC
Confidence                  3444566679999999999999999999999999 99999999999999999999999999987643

>KOG0595|consensus

Probab=99.94  E-value=1.6e-26  Score=212.93  Aligned_cols=151  Identities=20%  Similarity=0.287  Sum_probs=121.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      -|...+.||.|+|++||+|+++.++..||||.+.+..+  ...+.+..|+.+                            
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy   90 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY   90 (429)
T ss_pred             cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence            35566779999999999999999999999999988743  556667778877                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC------ceEEEeccccchhcccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR------WVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~------~~~kl~DFGla~~~~~~  161 (392)
                             +|+++.. .+++..++.++.||+.||++||+++| |||||||+||||+..      -.+||+|||+|+.+...
T Consensus        91 C~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~I-iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~  168 (429)
T KOG0595|consen   91 CNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNI-IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG  168 (429)
T ss_pred             CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence                   5665554 79999999999999999999999999 999999999999765      45899999999998754


Q ss_pred             ccccccccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         162 EYTGTDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       162 ~~~~~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ....   ...|.++||+||    ..|..+.|.|+.+.++++++
T Consensus       169 ~~a~---tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l  208 (429)
T KOG0595|consen  169 SMAE---TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL  208 (429)
T ss_pred             hHHH---HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence            4322   234667777665    44566667777777766665

>KOG3619|consensus

Probab=99.93  E-value=1.4e-26  Score=234.78  Aligned_cols=168  Identities=33%  Similarity=0.603  Sum_probs=148.8

Q ss_pred             cccchhhhccCCHHHHHHhhcC--------------CCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHH
Q psy6828         190 KCDEALLFEMLPRSVAEQLRRG--------------TSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCF  255 (392)
Q Consensus       190 ~~~~~lL~~~lp~~v~~~l~~~--------------~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~  255 (392)
                      ++.++++.+.+|.+++..++..              .....+.+++++++|+||+|||.++..+++++++.+||++|.+|
T Consensus        67 ~~qerlllsvlp~~va~~m~~~i~~~~~~~~~~~~f~~iy~~~h~nVSIl~adivgft~l~s~~saqelv~~LneLf~rf  146 (867)
T KOG3619|consen   67 QQQERLLLSVLPAHVAMEMKKDIIESSARCKNDNQFHKLYIQRHDNVSILFADIVGFTQLASQCSAQELVKVLNELFARF  146 (867)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHhhhhcchhhhccchhheeeccchHhhHHHHhhhhhhhcCCCHHHHHHHHHHHHHHH
Confidence            5567889999999998877542              12345677899999999999999999999999999999999999


Q ss_pred             HHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy6828         256 DSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVK  335 (392)
Q Consensus       256 ~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~  335 (392)
                      |+++.+++|..+|+.||||                               .+++|+|.++ ++||..|+.+.++|.++++
T Consensus       147 d~lA~~~~clRiKiLGdcy-------------------------------yCvsglp~~~-~dHA~~~v~mgl~Mi~aI~  194 (867)
T KOG3619|consen  147 DRLAAENHCLRIKILGDCY-------------------------------YCVSGLPEAR-PDHAVCCVEMGLDMIKAIK  194 (867)
T ss_pred             HHHHHhcceEeeeeeccee-------------------------------EEecCCCCCC-hhHHHHHHHHHHHHHHHHH
Confidence            9999999999999998888                               5666666444 4799999999999999999


Q ss_pred             HhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         336 RFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       336 ~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      .++..  .+.++++|||||+|+|.+|++|.+|++||||++.|.+|.+||+.|.||.
T Consensus       195 ~vr~a--t~~dvnmrvGihsG~Vl~GvlG~~kwq~DVws~dv~lAn~mEs~G~pgr  248 (867)
T KOG3619|consen  195 QVREA--TGVDVNMRVGIHSGSVLCGVLGLRKWQYDVWSNDVTLANHMEAGGVPGR  248 (867)
T ss_pred             HHHHH--hCCCCceEEEEecCceeecccccceeeeeeccchhhhhhhhhhcCCCce
Confidence            97643  4678999999999999999999999999999999999999999999996

>KOG0600|consensus

Probab=99.93  E-value=1.4e-26  Score=218.17  Aligned_cols=116  Identities=26%  Similarity=0.438  Sum_probs=100.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH----------------------------H
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------D   95 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------~   95 (392)
                      |...++||+|+||.||+|++..+|+.||+|+++...  .....-+.+|+.|                            +
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence            455788999999999999999999999999997654  2445567788888                            3


Q ss_pred             Hh--------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          96 IM--------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        96 ~l--------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                      ||        .+...+|++.++..|++|+++||.|||++++ +|||||.+|||||++|.+||+|||||+++....
T Consensus       199 YMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv-lHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  199 YMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV-LHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             cccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe-eeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            33        3445589999999999999999999999999 999999999999999999999999999876544

>KOG0592|consensus

Probab=99.93  E-value=7.8e-27  Score=221.61  Aligned_cols=113  Identities=23%  Similarity=0.339  Sum_probs=95.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |.-++.+|+|+|++|++|+++.+++.||||++.++.+   .-.+++..|-..                            
T Consensus        75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe  154 (604)
T KOG0592|consen   75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLE  154 (604)
T ss_pred             cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEE
Confidence            5568889999999999999999999999999987754   223344445444                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                              ++++.. +.|++..++.++.||+.||+|||++|| |||||||+||||+.++++||+|||.|+.+..
T Consensus       155 ~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GI-IHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  155 YAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGI-IHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             ecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCc-eeccCChhheeEcCCCcEEEeeccccccCCh
Confidence                    344333 379999999999999999999999999 9999999999999999999999999997643

>KOG3618|consensus

Probab=99.93  E-value=5.4e-26  Score=220.89  Aligned_cols=166  Identities=32%  Similarity=0.587  Sum_probs=143.4

Q ss_pred             cchhhhccCCHHHHHHhhcCCCcc---------------------------------ccccCceEEEeecccchhhhhcc
Q psy6828         192 DEALLFEMLPRSVAEQLRRGTSVE---------------------------------AESFDSVTIYFSDIVGFTAMSAE  238 (392)
Q Consensus       192 ~~~lL~~~lp~~v~~~l~~~~~~~---------------------------------~~~~~~vtvlf~DI~~ft~l~~~  238 (392)
                      .+.++...+|+.+++.+.+....+                                 .+..++++++|+||+|||++++.
T Consensus       278 Ke~MIhSVMP~kvAD~Llk~g~~pS~nd~~~~~~~s~~~r~~~s~~vk~~~~FRPF~M~~menVSILFADIvGFTkMSsn  357 (1318)
T KOG3618|consen  278 KERMIHSVMPRKVADDLLKQGDEPSENDVKRHATSSPKNRKKKSSIVKAPIAFRPFKMQQMENVSILFADIVGFTKMSSN  357 (1318)
T ss_pred             HHHHHHhhcChHHHHHHHhhcCCCCcccccCCCCCCcccccchhhccccccccCchhhhhhhhhhhhhhhhhchhhcccc
Confidence            356788889999998885422100                                 11234789999999999999999


Q ss_pred             CChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChh
Q psy6828         239 STPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQ  318 (392)
Q Consensus       239 ~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~  318 (392)
                      .++++++.+||++|.+||+.++.-|++++.+.||||                               .++.|.|++.. |
T Consensus       358 KsA~~LV~lLNDLFgRFD~LC~l~gcEKISTLGDCY-------------------------------YCVaGCPEPra-D  405 (1318)
T KOG3618|consen  358 KSAHALVGLLNDLFGRFDRLCELTGCEKISTLGDCY-------------------------------YCVAGCPEPRA-D  405 (1318)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcCcchhcccccee-------------------------------eeecCCCCCcc-c
Confidence            999999999999999999999999999999888888                               66667776665 6


Q ss_pred             hHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         319 HAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       319 ~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      ||.+|+++++.|+.+++++..++  .+.+++|+|+|||.|++|.+|.++.+||+|.+.||+|..|||.+++|.
T Consensus       406 HA~ccvEMGLgMI~AirqFd~~r--~e~VnMRVGvHTGtVlCGivGtrRfKFDVwSNDV~LAN~MEssGvag~  476 (1318)
T KOG3618|consen  406 HAYCCVEMGLGMIKAIRQFDQER--KEMVNMRVGVHTGTVLCGIVGTRRFKFDVWSNDVNLANLMESSGVAGK  476 (1318)
T ss_pred             ceeeehhhcchHHHHHHHHHHHh--hcccceEEEEecceEEeeeeecceEeeeeccCcchHHHHHHhcCCCcc
Confidence            99999999999999999986544  467999999999999999999988899999999999999999999985

>KOG0581|consensus

Probab=99.92  E-value=2.4e-25  Score=203.44  Aligned_cols=136  Identities=22%  Similarity=0.346  Sum_probs=112.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------HHhhcC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------DIMENE  100 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------~~l~~~  100 (392)
                      .+.||+|..|+||++.|+.+++.+|+|.+.... ....+++.+|+++                           +||..+
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG  163 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG  163 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence            678999999999999999999999999995432 3566788999998                           555544


Q ss_pred             Cc--------CCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828         101 DV--------KLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--------  163 (392)
Q Consensus       101 ~~--------~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--------  163 (392)
                      ++        .++|.....++.++++||.|||+ .+| |||||||+|||++..|.+||||||.|+.+.....        
T Consensus       164 SLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I-IHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~  242 (364)
T KOG0581|consen  164 SLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKI-IHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSA  242 (364)
T ss_pred             CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCe-eeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccccc
Confidence            33        59999999999999999999995 888 9999999999999999999999999987544321        


Q ss_pred             -------------ccccccceeeeeee--ccCCCCcc
Q psy6828         164 -------------TGTDQHSFLQHTYH--VNRAGSTE  185 (392)
Q Consensus       164 -------------~~~d~~s~g~~~~~--~~~~~~~~  185 (392)
                                   ...|+||||..++|  ..+|++..
T Consensus       243 YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~  279 (364)
T KOG0581|consen  243 YMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP  279 (364)
T ss_pred             ccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence                         12388888888888  55566555

>KOG0661|consensus

Probab=99.92  E-value=3.5e-26  Score=214.12  Aligned_cols=134  Identities=22%  Similarity=0.291  Sum_probs=109.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHH-HHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA-MKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~-~~~E~~~---------------------------   94 (392)
                      ..+|...++||+|+||.||+|..+.+|+.||||.++++.....+. =.+|+..                           
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            456788899999999999999999999999999997654321110 1122222                           


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-  164 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-  164 (392)
                               ++++..+..|++..++.|++||++||.|+|.+|+ +|||+||+|||+..+..+||+|||+||.+.+..-. 
T Consensus        89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~Gf-FHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT  167 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGF-FHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT  167 (538)
T ss_pred             HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCc-ccccCChhheEecccceeEecccccccccccCCCcc
Confidence                     5666667789999999999999999999999999 99999999999998899999999999976543321 


Q ss_pred             ----------------------cccccceeeeeee
Q psy6828         165 ----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ----------------------~~d~~s~g~~~~~  177 (392)
                                            ..|+|++||+++|
T Consensus       168 eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE  202 (538)
T KOG0661|consen  168 EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE  202 (538)
T ss_pred             hhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence                                  2299999999999

>KOG0616|consensus

Probab=99.92  E-value=1.2e-25  Score=199.18  Aligned_cols=149  Identities=18%  Similarity=0.254  Sum_probs=123.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||.|+||.|.+++++.+|..||+|++++...   .+.+...+|..+                             
T Consensus        47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv  126 (355)
T KOG0616|consen   47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYV  126 (355)
T ss_pred             hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEecc
Confidence            446789999999999999999999999999998765   455666777766                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                            .+++.. ++|++..++.++.||+.||+|||++++ ++|||||+|||||.+|.+||+|||+|+.......+    
T Consensus       127 ~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~i-iYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T----  200 (355)
T KOG0616|consen  127 PGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDI-IYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT----  200 (355)
T ss_pred             CCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCe-eeccCChHHeeeccCCcEEEEeccceEEecCcEEE----
Confidence                  444433 379999999999999999999999999 99999999999999999999999999987765432    


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhccCCH
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPR  202 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~  202 (392)
                       -+|++.|.+||    .+++..+|+|..+.+++.|+..
T Consensus       201 -lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG  237 (355)
T KOG0616|consen  201 -LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAG  237 (355)
T ss_pred             -ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcC
Confidence             23777777776    5566677888888887777643

>KOG3619|consensus

Probab=99.92  E-value=2.1e-25  Score=226.32  Aligned_cols=177  Identities=32%  Similarity=0.584  Sum_probs=147.4

Q ss_pred             ccchhhhccCCHHHHHHhhc----CCCccccccCceEEEeecccchhhhhccCCh----hhHHHhHHHHHHHHHHhhh--
Q psy6828         191 CDEALLFEMLPRSVAEQLRR----GTSVEAESFDSVTIYFSDIVGFTAMSAESTP----LQVVDFLNDLYTCFDSIVG--  260 (392)
Q Consensus       191 ~~~~lL~~~lp~~v~~~l~~----~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p----~~l~~~Ln~~~~~~~~~v~--  260 (392)
                      ..+.+|.+++|.+++.....    +.++..+.+..|.|+|+.+.+|..+..+.+.    .+.+++||+++..||++..  
T Consensus       616 ~Nr~LLeNiLPaHVA~HFl~~~~r~~eLY~qSy~~VgVMFASipnF~dFYsE~d~NneGlECLRlLNEIIaDFDeLL~~p  695 (867)
T KOG3619|consen  616 LNRLLLENILPSHVAAHFLGSKKRNEELYHQSYDCVGVMFASIPNFKDFYSECDVNNEGLECLRLLNEIIADFDELLSKP  695 (867)
T ss_pred             HHHHHHHhcChHHHHHHHhhcccchHHHHHhhhceEEEEEEecCCcceeeeeecCCcccchHHHHHHHHHhhHHHhcCcc
Confidence            34668999999999997732    3466788899999999999999888766643    4899999999999999998  


Q ss_pred             hc-CeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcc
Q psy6828         261 NY-DVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTV  339 (392)
Q Consensus       261 ~~-~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~  339 (392)
                      +| +.+++|++|-+|||+.|+.....++...                     | .+...|....+++|++|...++..| 
T Consensus       696 kF~~IEKIKTIGSTYMAAsGL~~~~~~~~~~---------------------~-~~~~~h~~~l~eFAlal~~~L~~IN-  752 (867)
T KOG3619|consen  696 KFSGVEKIKTIGSTYMAASGLNPTSAQENDQ---------------------S-LRQWSHLGALVEFALALMHKLDEIN-  752 (867)
T ss_pred             ccccceeEEEecchhhhhhCCChhhhhccCc---------------------c-hhHHhhHHHHHHHHHHHHHHHHhhh-
Confidence            55 5688999999998888886543222100                     0 0224689999999999999999976 


Q ss_pred             cCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         340 RHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       340 ~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                       ....+.+++||||+.|||++|+||++||+||+||+|||+||||+|++.+|+
T Consensus       753 -~~SfNnF~LrIGin~GpvvAGVIGArKPqYDIWGNTVNvASRMdSTGv~g~  803 (867)
T KOG3619|consen  753 -RHSFNNFELRIGINHGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGR  803 (867)
T ss_pred             -HHhhccceeeeceeccceeeeEecCCCCCccccccchhhhhcccccCCCCe
Confidence             556788999999999999999999999999999999999999999999985

>KOG0660|consensus

Probab=99.92  E-value=4.1e-25  Score=201.13  Aligned_cols=125  Identities=22%  Similarity=0.370  Sum_probs=104.0

Q ss_pred             eccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC--CChhHHHHHHHHHHH-----------------
Q psy6828          34 CSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK--KSVDITRAMKKELKI-----------------   94 (392)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~E~~~-----------------   94 (392)
                      ..|.+.......|...+++|+|+||.|+.+.++.+|+.||||++..  ......++..+|+.+                 
T Consensus        12 ~~~~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   12 EVFGELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             EeeeeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            4455555566777778999999999999999999999999999973  233445667777776                 


Q ss_pred             --------------HH--------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 --------------DI--------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 --------------~~--------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                                    ++        ++... .|++..+..+++|++.||+|+||.++ +||||||+|+|++.++.+||+||
T Consensus        92 p~~~~~f~DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnV-iHRDLKPsNll~n~~c~lKI~DF  169 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANV-IHRDLKPSNLLLNADCDLKICDF  169 (359)
T ss_pred             cccccccceeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccc-cccccchhheeeccCCCEEeccc
Confidence                          22        22222 49999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhccc
Q psy6828         153 GLTEFKRD  160 (392)
Q Consensus       153 Gla~~~~~  160 (392)
                      |+|+....
T Consensus       170 GLAR~~~~  177 (359)
T KOG0660|consen  170 GLARYLDK  177 (359)
T ss_pred             cceeeccc
Confidence            99998753

>cd07302 CHD cyclase homology domain

Probab=99.92  E-value=4.2e-24  Score=184.59  Aligned_cols=139  Identities=43%  Similarity=0.670  Sum_probs=126.8

Q ss_pred             ceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceee
Q psy6828         221 SVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVET  300 (392)
Q Consensus       221 ~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~  300 (392)
                      +++++|.|+++|+.+.+..+++++..+++.++..+.+++.+|+|++.++.||++|++|+.|..                 
T Consensus         1 ~~~il~~di~~~t~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~gd~~~~~f~~~~~-----------------   63 (177)
T cd07302           1 EVTVLFADIVGFTALSERLGPEELVELLNEYFSAFDEIIERHGGTVDKTIGDAVMAVFGLPGA-----------------   63 (177)
T ss_pred             CEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCceEEEEeCCCCC-----------------
Confidence            478999999999999999999999999999999999999999999999999999888887632                 


Q ss_pred             ccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHH
Q psy6828         301 IGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTA  380 (392)
Q Consensus       301 ~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~A  380 (392)
                                     .++++.+|+.+|+++++.+++++.......++++|||||+|++++|.+|..++.|+++|++||+|
T Consensus        64 ---------------~~~~~~~A~~~a~~i~~~~~~~~~~~~~~~~~~~riGi~~G~~~~g~~g~~~~~~~~~G~~v~~A  128 (177)
T cd07302          64 ---------------HEDHAERAVRAALEMQEALAELNAEREGGPPLRLRIGIHTGPVVAGVVGSERPEYTVIGDTVNLA  128 (177)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEecceEEEEecCCCCcceeEecchHhHH
Confidence                           34689999999999999999987554456789999999999999999999966999999999999


Q ss_pred             HhhhhcCCCCC
Q psy6828         381 SRMESTGEDVV  391 (392)
Q Consensus       381 sRle~~~~~g~  391 (392)
                      +||++.+++|.
T Consensus       129 ~rl~~~a~~~~  139 (177)
T cd07302         129 ARLESLAKPGQ  139 (177)
T ss_pred             HHHHhcCCCCE
Confidence            99999999874

Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.

>KOG0585|consensus

Probab=99.91  E-value=4.4e-25  Score=206.62  Aligned_cols=113  Identities=24%  Similarity=0.361  Sum_probs=97.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------------hHHHHHHHHHHH----------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------------DITRAMKKELKI----------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------------~~~~~~~~E~~~----------------   94 (392)
                      .|.....||+|.||+|.+|++..+++.||||++++...              ...+...+|+.+                
T Consensus        98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL  177 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL  177 (576)
T ss_pred             heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence            36778899999999999999999999999999987543              134678899988                


Q ss_pred             ------------HHhhcCC-------cC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 ------------DIMENED-------VK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 ------------~~l~~~~-------~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                  +|+..+.       .. +++.+++.|+++++.||+|||.+|| |||||||+|+|++++|++||+|||.
T Consensus       178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgi-iHRDIKPsNLLl~~~g~VKIsDFGV  256 (576)
T KOG0585|consen  178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGI-IHRDIKPSNLLLSSDGTVKISDFGV  256 (576)
T ss_pred             cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCe-eccccchhheEEcCCCcEEeeccce
Confidence                        3433322       13 8999999999999999999999999 9999999999999999999999999


Q ss_pred             chhc
Q psy6828         155 TEFK  158 (392)
Q Consensus       155 a~~~  158 (392)
                      +...
T Consensus       257 s~~~  260 (576)
T KOG0585|consen  257 SNEF  260 (576)
T ss_pred             eeec
Confidence            8754

>KOG0663|consensus

Probab=99.91  E-value=5.2e-25  Score=198.05  Aligned_cols=115  Identities=25%  Similarity=0.351  Sum_probs=96.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      ...+.|++|+||.||+|+++.|++.||+|+++-..-  ..----.+|+.+                              
T Consensus        79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~  158 (419)
T KOG0663|consen   79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY  158 (419)
T ss_pred             HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence            346789999999999999999999999999974431  111123556665                              


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                            .++++...+|+..++..++.|++.|++|||.+.| +||||||+|+|+++.|.+||+|||+|+.+.+..
T Consensus       159 ~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wi-lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  159 VEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWI-LHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             HHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhcee-EecccchhheeeccCCcEEecccchhhhhcCCc
Confidence                  5555666689999999999999999999999999 999999999999999999999999999887653

>KOG0594|consensus

Probab=99.91  E-value=1.3e-24  Score=198.23  Aligned_cols=110  Identities=26%  Similarity=0.444  Sum_probs=89.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~--------------------------------   94 (392)
                      .+.+|+|+||+||+|+.+.+|+.||+|+++-...+  .-....+|+.+                                
T Consensus        16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv   95 (323)
T KOG0594|consen   16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV   95 (323)
T ss_pred             HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence            45699999999999999999999999999754321  11122333333                                


Q ss_pred             ---------HHhhcCC---cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------DIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------~~l~~~~---~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                               .|+....   ..++...++.+++||+.||.|||+++| +||||||+|||++++|.+||+|||+|+...
T Consensus        96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~I-lHRDLKPQNlLi~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen   96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGI-LHRDLKPQNLLISSSGVLKLADFGLARAFS  171 (323)
T ss_pred             EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccCCcceEEECCCCcEeeeccchHHHhc
Confidence                     4444433   247778899999999999999999999 999999999999999999999999999655

>KOG0605|consensus

Probab=99.90  E-value=1.8e-24  Score=205.53  Aligned_cols=110  Identities=20%  Similarity=0.288  Sum_probs=95.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      +....+||+|+||.||+|+.+.||+.||+|++++..+   .+.+.++.|..+                          +|
T Consensus       143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEy  222 (550)
T KOG0605|consen  143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEY  222 (550)
T ss_pred             chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEe
Confidence            3446789999999999999999999999999998876   455667777777                          23


Q ss_pred             ---------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          97 ---------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        97 ---------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                               +.+.+ .|++..++.++.+++.|+.-||+.|+ |||||||+|+|||..|++||+|||||.-
T Consensus       223 lPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gy-IHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  223 LPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGY-IHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             cCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCc-ccccCChhheeecCCCCEeeccccccch
Confidence                     33333 69999999999999999999999999 9999999999999999999999999964

>KOG0658|consensus

Probab=99.90  E-value=2e-24  Score=196.94  Aligned_cols=127  Identities=20%  Similarity=0.263  Sum_probs=100.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.+|.|+||.||+|....+++.||||+.-+...    .-.+|+++                               
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            4557789999999999999999999999999854432    11122222                               


Q ss_pred             --------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhccccc
Q psy6828          95 --------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 --------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~  162 (392)
                              ++++   ..+.+++...++.++.||++||.|||+.+| +||||||+|+|+|.+ |.+||||||.|+.+..++
T Consensus       102 eymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~I-cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  102 EYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGI-CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             HhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCc-ccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence                    2222   123478889999999999999999999999 999999999999977 999999999999875544


Q ss_pred             cc-----------------------cccccceeeeeee
Q psy6828         163 YT-----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~~-----------------------~~d~~s~g~~~~~  177 (392)
                      ..                       ..|+||.||++-|
T Consensus       181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aE  218 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAE  218 (364)
T ss_pred             CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHH
Confidence            32                       2288888888877

>KOG0597|consensus

Probab=99.90  E-value=6.6e-24  Score=202.29  Aligned_cols=149  Identities=21%  Similarity=0.304  Sum_probs=117.4

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ...-+|+|+||.||+|+.+.+.+.||||.+.|...  ...+.+.+|++|                               
T Consensus         6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g   85 (808)
T KOG0597|consen    6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG   85 (808)
T ss_pred             HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence            34568999999999999999999999999987654  345667888887                               


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccce
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF  171 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s~  171 (392)
                         .+++. ++.++|+.++.+..|+++||.|||+.+| +|||+||.|||++..|.+|+||||+++.+..+....+.+-  
T Consensus        86 ~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~ri-lhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik--  161 (808)
T KOG0597|consen   86 DLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRI-LHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK--  161 (808)
T ss_pred             hHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCc-ccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc--
Confidence               33333 3379999999999999999999999999 9999999999999999999999999998877654433332  


Q ss_pred             eeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         172 LQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       172 g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      |+++|++|+    .++....|.|+.+.+++++.
T Consensus       162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~  194 (808)
T KOG0597|consen  162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELY  194 (808)
T ss_pred             CcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence            566666544    44444555566666666554

>KOG0611|consensus

Probab=99.89  E-value=2.2e-24  Score=198.27  Aligned_cols=133  Identities=23%  Similarity=0.324  Sum_probs=112.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      ..+|.....||+|+||+|-++++...|+.||||.+++..+   +..-.+.+|++|                         
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            3456677889999999999999999999999999988765   456678999998                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT  164 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~  164 (392)
                                +|+.... .|++.+++.+++||.+|+.|+|.+++ +|||||.+|||||.++++||+|||++-.+......
T Consensus       132 MEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrV-vHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  132 MEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRV-VHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccc-eecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence                      4444333 69999999999999999999999999 99999999999999999999999999876543322


Q ss_pred             c-----------------------ccccceeeeeee
Q psy6828         165 G-----------------------TDQHSFLQHTYH  177 (392)
Q Consensus       165 ~-----------------------~d~~s~g~~~~~  177 (392)
                      .                       .|.||+|+++|.
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYt  245 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYT  245 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHH
Confidence            1                       178888888876

>KOG0583|consensus

Probab=99.89  E-value=1.6e-23  Score=200.91  Aligned_cols=114  Identities=23%  Similarity=0.310  Sum_probs=98.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC----h-hHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS----V-DITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~-~~~~~~~~E~~~-----------------------   94 (392)
                      ...|...+.||+|+||+|+.|.+..+++.||+|++++..    . ...+.+.+|+.+                       
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            456788999999999999999999999999999887642    1 234456677765                       


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~  158 (392)
                                   +++.+ .+++++.+++.+++|+++|+.|||++++ +||||||+|||++.+ +++||+|||++...
T Consensus        96 ~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi-~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGI-VHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             EEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCE-eeCCCCHHHEEecCCCCCEEEecccccccc
Confidence                         44445 4489999999999999999999999999 999999999999999 99999999999977

>KOG0694|consensus

Probab=99.89  E-value=2.5e-23  Score=203.04  Aligned_cols=153  Identities=19%  Similarity=0.185  Sum_probs=122.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------H
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------D   95 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~   95 (392)
                      +...+.||+|+||+|+++..+.+++.||||.++|..+   +..+....|..|                           +
T Consensus       370 F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvme  449 (694)
T KOG0694|consen  370 FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVME  449 (694)
T ss_pred             eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEE
Confidence            3446789999999999999999999999999998865   456667777777                           3


Q ss_pred             HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                      |...+       ...|++..++.|+.+++.||+|||+++| |+||||.+|||||.+|.+||+|||+++..-.....  .-
T Consensus       450 y~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~I-IYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~--Ts  526 (694)
T KOG0694|consen  450 YVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGI-IYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR--TS  526 (694)
T ss_pred             ecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCc-eeeecchhheEEcccCcEEecccccccccCCCCCc--cc
Confidence            33222       2369999999999999999999999999 99999999999999999999999999865432221  12


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhccCC
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      .-.|++-|++|+    ..|+..+|+|..+.|+++||-
T Consensus       527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~  563 (694)
T KOG0694|consen  527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV  563 (694)
T ss_pred             cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc
Confidence            235777787665    566777888888888887763

>KOG4236|consensus

Probab=99.89  E-value=3.2e-23  Score=196.09  Aligned_cols=137  Identities=25%  Similarity=0.295  Sum_probs=114.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------------   94 (392)
                      .+.||.|.||+||-|.++.+|+.||||++++...  ...+.+++|+.|                                
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            5679999999999999999999999999987544  445778899888                                


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhcccccccc---
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAEYTG---  165 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~~~---  165 (392)
                         -++....++|++.....++.||+.||.|||-+|| +|.||||+|+||.+.   -++||||||+++++.+.....   
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI-vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV  727 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI-VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV  727 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce-eeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence               2333455689999999999999999999999999 999999999999765   469999999999887655332   


Q ss_pred             -------------------ccccceeeeeee--ccCCCCccc
Q psy6828         166 -------------------TDQHSFLQHTYH--VNRAGSTES  186 (392)
Q Consensus       166 -------------------~d~~s~g~~~~~--~~~~~~~~~  186 (392)
                                         .|+||.|++.|-  ...|++++.
T Consensus       728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd  769 (888)
T KOG4236|consen  728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED  769 (888)
T ss_pred             CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence                               289999999988  445666663

>KOG0591|consensus

Probab=99.89  E-value=2e-23  Score=183.96  Aligned_cols=117  Identities=17%  Similarity=0.279  Sum_probs=94.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |.....+|+|+||+||++.+..+|..+|.|.++-..+  ...+....|+.+                             
T Consensus        21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE  100 (375)
T KOG0591|consen   21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME  100 (375)
T ss_pred             HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence            4446679999999999999999999999999974433  233445556555                             


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc--C-CcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHD--S-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~--~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                 ...+.....+++..++.++.|++.||.++|+  . +.++||||||.||+|+.+|.+||+|||+++++.+
T Consensus       101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s  180 (375)
T KOG0591|consen  101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS  180 (375)
T ss_pred             hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence                       2222233469999999999999999999998  3 3349999999999999999999999999998765


Q ss_pred             cc
Q psy6828         161 AE  162 (392)
Q Consensus       161 ~~  162 (392)
                      ..
T Consensus       181 ~~  182 (375)
T KOG0591|consen  181 KT  182 (375)
T ss_pred             hh
Confidence            43

>KOG0667|consensus

Probab=99.89  E-value=7.8e-23  Score=199.17  Aligned_cols=134  Identities=23%  Similarity=0.306  Sum_probs=109.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+|.....||+|+||.|.+|.+..|++.||||+++... ....+...|+.+                           
T Consensus       184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H  262 (586)
T KOG0667|consen  184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH  262 (586)
T ss_pred             eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence            3457888889999999999999999999999999997653 333444555555                           


Q ss_pred             -------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC--ceEEEeccccchhc
Q psy6828          95 -------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~--~~~kl~DFGla~~~  158 (392)
                                   +++++. -..|+...++.++.||+.||.+||+.+| ||.||||+||||.+.  ..+||+|||.|.+.
T Consensus       263 lciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~I-IHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  263 LCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGI-IHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCChhheeeccCCcCceeEEeccccccc
Confidence                         555533 2258999999999999999999999999 999999999999754  46999999999876


Q ss_pred             ccccc--------------------ccccccceeeeeee
Q psy6828         159 RDAEY--------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~~--------------------~~~d~~s~g~~~~~  177 (392)
                      .....                    +..|+|||||++.|
T Consensus       342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAE  380 (586)
T KOG0667|consen  342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAE  380 (586)
T ss_pred             CCcceeeeeccccccchhhccCCCCCccceeehhhhHHh
Confidence            55433                    23499999999999

>KOG0580|consensus

Probab=99.89  E-value=4e-24  Score=184.34  Aligned_cols=113  Identities=21%  Similarity=0.337  Sum_probs=97.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      +...++||+|-||.||+|+.+.++..||+|++.+..+   +....+.+|++|                            
T Consensus        24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy  103 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY  103 (281)
T ss_pred             ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence            4558999999999999999999999999999988765   233467778777                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              ++-.....++++..+..+++|++.||.|+|.+++ |||||||+|+|++.++.+|++|||.+....
T Consensus       104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V-IhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc-ccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence                    2222344479999999999999999999999999 999999999999999999999999987654

>KOG0197|consensus

Probab=99.88  E-value=1.1e-22  Score=194.12  Aligned_cols=153  Identities=29%  Similarity=0.363  Sum_probs=120.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.||+|.||+||+|... ....||+|.+....+. .+.|.+|+++                                  
T Consensus       211 ~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             HHHhcCCccceEEEEEEc-CCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence            678999999999999633 2348999999776543 3567788888                                  


Q ss_pred             -HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--------
Q psy6828          95 -DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--------  164 (392)
Q Consensus        95 -~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--------  164 (392)
                       +|++. ....++..+...++.|||+|+.||+++++ |||||...|||++++..+||+|||+|+...++.++        
T Consensus       289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~-IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP  367 (468)
T KOG0197|consen  289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNY-IHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP  367 (468)
T ss_pred             HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCc-cchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence             77775 44479999999999999999999999999 99999999999999999999999999965544432        


Q ss_pred             ----------------cccccceeeeeeec---cCCCCcccccccccchhhhccCCHHHHHHhhcCCCcccc
Q psy6828         165 ----------------GTDQHSFLQHTYHV---NRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAE  217 (392)
Q Consensus       165 ----------------~~d~~s~g~~~~~~---~~~~~~~~~d~~~~~~lL~~~lp~~v~~~l~~~~~~~~~  217 (392)
                                      .+||||||+++||.   .+.++..             +-..++.+.+.++..++.+
T Consensus       368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~-------------msn~ev~~~le~GyRlp~P  426 (468)
T KOG0197|consen  368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG-------------MSNEEVLELLERGYRLPRP  426 (468)
T ss_pred             ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC-------------CCHHHHHHHHhccCcCCCC
Confidence                            33999999999992   2222222             4455677777776555443

>KOG3618|consensus

Probab=99.87  E-value=7.2e-23  Score=199.33  Aligned_cols=175  Identities=34%  Similarity=0.499  Sum_probs=145.6

Q ss_pred             cccchhhhccCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccC--ChhhHHHhHHHHHHHHHHhhhhcC---e
Q psy6828         190 KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAES--TPLQVVDFLNDLYTCFDSIVGNYD---V  264 (392)
Q Consensus       190 ~~~~~lL~~~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~--~p~~l~~~Ln~~~~~~~~~v~~~~---g  264 (392)
                      .+...+|.+++|.++++.++.... ..+.+.++.++|+.|++|.++.++.  .-.|..+.||++...||+...+-+   .
T Consensus      1053 dQADwLL~NiIP~HvaE~LK~~~k-YSeNH~~~gviFASIvNfnemYeEnyeGGkEflRVLNElIGDFDELLsrPdf~~i 1131 (1318)
T KOG3618|consen 1053 DQADWLLRNIIPYHVAEQLKVSQK-YSENHDSGGVIFASIVNFNEMYEENYEGGKEFLRVLNELIGDFDELLSRPDFSSI 1131 (1318)
T ss_pred             HHHHHHHhccchHHHHHHhhcccc-ccccCccceEEEEEeccHHHHHHHhhhchHHHHHHHHHHhccHHHHhccccchhh
Confidence            456789999999999999987654 4566688999999999999998775  678999999999999999998764   5


Q ss_pred             EEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCC
Q psy6828         265 YKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPH  344 (392)
Q Consensus       265 ~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~  344 (392)
                      +++|+||-+|||+.|+......                |         -.++.+|-...+++|++|++.+..+|.+- .+
T Consensus      1132 EKIKTIG~tyMAASGLnp~~~~----------------~---------~~hp~EHl~~l~eFa~amq~Vvd~FN~dl-L~ 1185 (1318)
T KOG3618|consen 1132 EKIKTIGATYMAASGLNPAQAQ----------------D---------GSHPQEHLQILFEFAKAMQRVVDDFNNDL-LW 1185 (1318)
T ss_pred             HHHhhhhHHHHHhcCCChHHcc----------------C---------CCChHHHHHHHHHHHHHHHHHHHHhhhhh-hh
Confidence            6777777777777776432110                0         01345799999999999999999998543 45


Q ss_pred             CCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         345 DDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       345 ~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      .++.+|||.|.|+|.+|+||++|--||+||||||+||||.+++.+.+
T Consensus      1186 Fnf~lrvG~NiGpvTAGVIGTtKLyYDIWGDtVNiASRMdsTGv~nR 1232 (1318)
T KOG3618|consen 1186 FNFKLRVGFNIGPVTAGVIGTTKLYYDIWGDTVNIASRMDSTGVENR 1232 (1318)
T ss_pred             eeeeEEeeccccCccccccccceeeehhhcchhhhhhhccccCCcce
Confidence            67999999999999999999999999999999999999999998763

>KOG0664|consensus

Probab=99.87  E-value=9.6e-23  Score=178.93  Aligned_cols=128  Identities=23%  Similarity=0.385  Sum_probs=104.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------------------------H
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------------D   95 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------------~   95 (392)
                      .++||-|+||+||...+..+|+.||+|++..-.  +...+++.+|+..                               +
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            689999999999999999999999999996532  3445667777666                               2


Q ss_pred             Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc----
Q psy6828          96 IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT----  164 (392)
Q Consensus        96 ~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~----  164 (392)
                      +++.       ....++...+.-+++||+.||+|||+.+| +||||||.|+|++++..+||||||+++....+...    
T Consensus       138 LmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~I-LHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTq  216 (449)
T KOG0664|consen  138 LMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANI-LHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTH  216 (449)
T ss_pred             HHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcch-hhccCCCccEEeccCceEEecccccccccchhhhhhhHH
Confidence            2222       12258889999999999999999999999 99999999999999999999999999976544321    


Q ss_pred             ---------------------cccccceeeeeee
Q psy6828         165 ---------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ---------------------~~d~~s~g~~~~~  177 (392)
                                           ..|+||.|+++-|
T Consensus       217 EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaE  250 (449)
T KOG0664|consen  217 EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAE  250 (449)
T ss_pred             HHHHHHhccHHHhhcchhhcCccceehhhHHHHH
Confidence                                 1288999888776

>KOG0198|consensus

Probab=99.87  E-value=1.2e-21  Score=181.47  Aligned_cols=153  Identities=20%  Similarity=0.317  Sum_probs=114.3

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+|+..|||.+........+.+.+|+.+                                 
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~  100 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG  100 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence            35679999999999999999999999999976643234556777776                                 


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhccc-cccccccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRD-AEYTGTDQ  168 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~-~~~~~~d~  168 (392)
                          +++.+....|++..++.+.+||++||.|||++|+ +||||||+|||++. ++.+||+|||+++.... ......+.
T Consensus       101 GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~-vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~  179 (313)
T KOG0198|consen  101 GSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI-VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSEL  179 (313)
T ss_pred             CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eccCcccceEEEeCCCCeEEeccCccccccccccccccccc
Confidence                3333333369999999999999999999999999 99999999999999 79999999999987664 11112233


Q ss_pred             cceeeeeeeccCCCC---cc--cccccccchhhhccCC
Q psy6828         169 HSFLQHTYHVNRAGS---TE--SLHCKCDEALLFEMLP  201 (392)
Q Consensus       169 ~s~g~~~~~~~~~~~---~~--~~d~~~~~~lL~~~lp  201 (392)
                      ...|.+.|++|+.-.   ..  ..|.|+.++.+-.|+.
T Consensus       180 ~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T  217 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT  217 (313)
T ss_pred             cccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC
Confidence            345666666665222   12  5566666666666654

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.86  E-value=5.1e-22  Score=188.77  Aligned_cols=126  Identities=17%  Similarity=0.204  Sum_probs=100.4

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN--   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~--   99 (392)
                      .||+|+||.||++.+..+|+.||+|++.+...   .....+.+|+.+                          +++..  
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            58999999999999999999999999975432   233456666665                          22221  


Q ss_pred             ------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828         100 ------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----------  162 (392)
Q Consensus       100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----------  162 (392)
                            ....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......           
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          82 LFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDV-VYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence                  12358999999999999999999999999 999999999999999999999999987421110           


Q ss_pred             ------------cccccccceeeeeee
Q psy6828         163 ------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------~~~~d~~s~g~~~~~  177 (392)
                                  ....|+||+|+++|+
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~e  187 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhh
Confidence                        113499999999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG2345|consensus

Probab=99.86  E-value=5.7e-22  Score=171.89  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=100.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..+|...+.+|+|||+.||++.+..+++.||+|++...+.+..+..++|++.                            
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            4789999999999999999999999999999999988877778888888887                            


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                     +.++.++..+++.++..|+.++++||++||+..  . .||||||.|||+.+.+.+++.|||.+..
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~y-AH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPY-AHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcc-cccCCCcceeEecCCCceEEEeccCccc
Confidence                           222223336999999999999999999999987  6 9999999999999999999999999864

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.86  E-value=2.7e-22  Score=188.87  Aligned_cols=131  Identities=21%  Similarity=0.265  Sum_probs=104.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+                              
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (303)
T cd07869           7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH   86 (303)
T ss_pred             ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC
Confidence            5556789999999999999999999999999975432 222345566665                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                          +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......        
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  165 (303)
T cd07869          87 TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI-LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV  165 (303)
T ss_pred             cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcc
Confidence                3344444468999999999999999999999999 999999999999999999999999986422100        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~  196 (303)
T cd07869         166 TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVE  196 (303)
T ss_pred             cCCCCChHHHcCCCCCCcHHHHHHHHHHHHH
Confidence                            112399999999998

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0578|consensus

Probab=99.86  E-value=7.3e-22  Score=189.14  Aligned_cols=155  Identities=17%  Similarity=0.226  Sum_probs=120.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------H
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------D   95 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~   95 (392)
                      ....|.....+|+|+-|.||.++...+++.||||++........+.+.+|+.+                          +
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            34567778899999999999999999999999999988877777778888887                          5


Q ss_pred             HhhcCCc-------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          96 IMENEDV-------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        96 ~l~~~~~-------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                      |++.+.+       .++|.++..++++++.||+|||.++| +|||||.+|||++.+|.+||+|||+|..+........  
T Consensus       351 ym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gI-iHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~--  427 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGI-IHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS--  427 (550)
T ss_pred             ecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcce-eeeccccceeEeccCCcEEEeeeeeeeccccccCccc--
Confidence            5555443       58999999999999999999999999 9999999999999999999999999998766553222  


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhcc
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEM  199 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~  199 (392)
                      ..+|++.|++||    -.+..++|+|+++.+.-+|
T Consensus       428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM  462 (550)
T KOG0578|consen  428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM  462 (550)
T ss_pred             cccCCCCccchhhhhhcccCccccchhhhhHHHHH
Confidence            123445454444    3334444555544443333

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.86  E-value=1.2e-21  Score=182.82  Aligned_cols=129  Identities=18%  Similarity=0.175  Sum_probs=102.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------   94 (392)
                      ..+.||+|+||.||++.+..+++.||+|.+.+...   .....+.+|+.+                              
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMN   83 (285)
T ss_pred             EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC
Confidence            34569999999999999999999999999876543   223356677776                              


Q ss_pred             -----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 -----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 -----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                           +++. .....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.......      
T Consensus        84 ~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05631          84 GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI-VYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV  162 (285)
T ss_pred             CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCC
Confidence                 1221 122358999999999999999999999999 999999999999999999999999987542211      


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DvwslGvil~e  193 (285)
T cd05631         163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYE  193 (285)
T ss_pred             CCCCccCHhhhcCCCCCcccCchhHHHHHHH
Confidence                            112389999998888

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0662|consensus

Probab=99.86  E-value=5.6e-22  Score=164.22  Aligned_cols=113  Identities=26%  Similarity=0.360  Sum_probs=92.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHH------HHHHHHH------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRA------MKKELKI------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~------~~~E~~~------------------------   94 (392)
                      ...+.+|+|+||+||+++++.+++.||+|.++...-  ..-..      +.+|+..                        
T Consensus         5 dkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd   84 (292)
T KOG0662|consen    5 DKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_pred             HHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh
Confidence            345679999999999999999999999999864322  11122      3334433                        


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                          .|+..-++.++.+.++.++.|++.||.|+|++++ +||||||.|+|++.+|.+|++|||+++...-
T Consensus        85 qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnv-lhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   85 QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNV-LHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhh-hhccCCcceEEeccCCcEEecccchhhhcCC
Confidence                4555556679999999999999999999999999 9999999999999999999999999997643

>KOG0588|consensus

Probab=99.85  E-value=4.3e-22  Score=193.36  Aligned_cols=130  Identities=24%  Similarity=0.302  Sum_probs=108.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-h--hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-V--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~--~~~~~~~~E~~~----------------------------   94 (392)
                      +..+..||+|+-|.|.+|++..||+..|||++.+.. .  .....+.+|+.+                            
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            345678999999999999999999999999998873 2  233456677776                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~---  164 (392)
                             +|+-.++ .+++.++..+++||+.|+.|||..++ +||||||+|+||+.++++||+|||+|....++...   
T Consensus        94 v~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~i-cHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS  171 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFNI-CHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS  171 (786)
T ss_pred             cCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhcc-eeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence                   4444443 79999999999999999999999999 99999999999999999999999999875544322   


Q ss_pred             --------------------cccccceeeeeee
Q psy6828         165 --------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 --------------------~~d~~s~g~~~~~  177 (392)
                                          ..||||+|+++|-
T Consensus       172 CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfA  204 (786)
T KOG0588|consen  172 CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFA  204 (786)
T ss_pred             CCCcccCCchhhcCCCCCCCccccchhHHHHHH
Confidence                                2399999999998

>KOG0192|consensus

Probab=99.85  E-value=1.7e-21  Score=185.38  Aligned_cols=109  Identities=28%  Similarity=0.429  Sum_probs=92.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCcE-EEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRI-FAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~-vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+|+|+||+||++.  +.|+. ||||.+.....  ...+.|.+|+.+                               
T Consensus        46 ~~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            3449999999999996  44777 99999987543  225689999988                               


Q ss_pred             -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828          95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSA-LRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~-iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~  160 (392)
                           +++.. ....++...+..++.||+.||.|||+++ | |||||||+|||++.++ ++||+|||+++....
T Consensus       124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i-IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI-IHRDLKSDNILVDLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe-eecccChhhEEEcCCCCEEEECCCccceeecc
Confidence                 55544 3557999999999999999999999999 8 9999999999999998 999999999986553

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.85  E-value=9.5e-22  Score=189.99  Aligned_cols=110  Identities=21%  Similarity=0.250  Sum_probs=91.3

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||+||++.+..+++.||||++++...   .....+.+|+.+                             
T Consensus         4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~   83 (363)
T cd05628           4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFL   83 (363)
T ss_pred             eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCC
Confidence            345679999999999999999999999999976432   233456666655                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.. ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        84 ~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~gi-vHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          84 PGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGF-IHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecCCCHHHeEECCCCCEEEeeccCcccc
Confidence                  22222 2368999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.85  E-value=4.3e-21  Score=182.53  Aligned_cols=126  Identities=18%  Similarity=0.203  Sum_probs=99.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN--   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~--   99 (392)
                      .||+|+||.||++.+..+|+.||+|.+.+...   .....+.+|+.+                          +|+..  
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            58999999999999999999999999975422   233445566555                          22221  


Q ss_pred             ------CCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828         100 ------EDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-----------  161 (392)
Q Consensus       100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-----------  161 (392)
                            ....+++..+..++.|++.||.|||+ +++ +||||||+|||++.++.+||+|||+++.....           
T Consensus        82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~i-vHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          82 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCE-EecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence                  12368999999999999999999997 789 99999999999999999999999998642110           


Q ss_pred             ------------ccccccccceeeeeee
Q psy6828         162 ------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------~~~~~d~~s~g~~~~~  177 (392)
                                  .....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYE  188 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeee
Confidence                        0123499999999999

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0193|consensus

Probab=99.85  E-value=1.4e-21  Score=188.27  Aligned_cols=107  Identities=22%  Similarity=0.343  Sum_probs=90.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      ....+||+|+||+||+|.+.   ..||||.++....  ...+.|.+|+..                              
T Consensus       395 ~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeG  471 (678)
T KOG0193|consen  395 LLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEG  471 (678)
T ss_pred             hccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccC
Confidence            44788999999999999754   3699999976554  577889999887                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                          .++.-...+|+-.....|++||++|+.|||.++| ||||||..||++.+++++||+|||++..
T Consensus       472 sSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I-IHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  472 SSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI-IHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             chhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh-hhhhccccceEEccCCcEEEecccceee
Confidence                2222222368888899999999999999999999 9999999999999999999999999865

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.4e-21  Score=183.02  Aligned_cols=129  Identities=19%  Similarity=0.244  Sum_probs=104.3

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+.....   ...+.+.+|+.+                             
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   83 (291)
T cd05612           4 ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYV   83 (291)
T ss_pred             eeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCC
Confidence            345679999999999999999999999999965432   334556677766                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                            +++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......      
T Consensus        84 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt  161 (291)
T cd05612          84 PGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEI-VYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGT  161 (291)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCC
Confidence                  233222 258999999999999999999999999 999999999999999999999999987643321      


Q ss_pred             --------------cccccccceeeeeee
Q psy6828         163 --------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------~~~~d~~s~g~~~~~  177 (392)
                                    ....|+||+|+++|+
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwSlG~il~~  190 (291)
T cd05612         162 PEYLAPEVIQSKGHNKAVDWWALGILIYE  190 (291)
T ss_pred             hhhcCHHHHcCCCCCchhhHHHHHHHHHH
Confidence                          123499999999998

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG4717|consensus

Probab=99.85  E-value=4.3e-22  Score=188.07  Aligned_cols=165  Identities=21%  Similarity=0.270  Sum_probs=128.9

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------------------   94 (392)
                      +-.+|...+.||+|-|.+|.++++..+|+.||||++.+.++.  .+..+.+|+..                         
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence            456677788999999999999999999999999999998874  34567788776                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhcccccc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~  163 (392)
                                +|+-.++..+.+..+.+|+.||+.|+.|+|+..+ +||||||+|+.+-+. |-+||.|||++-.+.....
T Consensus        96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHV-VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k  174 (864)
T KOG4717|consen   96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHV-VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK  174 (864)
T ss_pred             EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhh-hcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence                      5655566679999999999999999999999999 999999999988654 8899999999976554432


Q ss_pred             cc-----------------------ccccceeeeeee--ccCCCCcc---------cccc---------cccchhhhccC
Q psy6828         164 TG-----------------------TDQHSFLQHTYH--VNRAGSTE---------SLHC---------KCDEALLFEML  200 (392)
Q Consensus       164 ~~-----------------------~d~~s~g~~~~~--~~~~~~~~---------~~d~---------~~~~~lL~~~l  200 (392)
                      ..                       .|+||+|+++|+  -.+.++.+         -+||         ...+.++..||
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sML  254 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSML  254 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHH
Confidence            21                       299999999999  22222222         1122         45677788887


Q ss_pred             CHHHHHH
Q psy6828         201 PRSVAEQ  207 (392)
Q Consensus       201 p~~v~~~  207 (392)
                      -++...+
T Consensus       255 vRdPkkR  261 (864)
T KOG4717|consen  255 VRDPKKR  261 (864)
T ss_pred             hcCchhh
Confidence            6554443

>KOG0983|consensus

Probab=99.85  E-value=5.6e-21  Score=167.92  Aligned_cols=136  Identities=17%  Similarity=0.261  Sum_probs=110.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------------   94 (392)
                      ...+|.|+.|+|++++.+.+|...|||.+.+..- +..++++..+.+                                 
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C  176 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC  176 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence            4568999999999999999999999999987643 556667776666                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccccc-------
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-------  164 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------  164 (392)
                        .++++....++|.-+-.+..-+++||.||-+ +++ +|||+||+|||+|..|++|+||||++..+.+..-.       
T Consensus       177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~v-iHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~  255 (391)
T KOG0983|consen  177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGV-IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCA  255 (391)
T ss_pred             HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcce-eecccCccceEEccCCCEEeecccccceeecccccccccCCc
Confidence              4555566679999999999999999999996 466 99999999999999999999999999875432211       


Q ss_pred             ------------------cccccceeeeeee--ccCCCCcc
Q psy6828         165 ------------------GTDQHSFLQHTYH--VNRAGSTE  185 (392)
Q Consensus       165 ------------------~~d~~s~g~~~~~--~~~~~~~~  185 (392)
                                        ..|+||||+.+||  +.++++..
T Consensus       256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~  296 (391)
T KOG0983|consen  256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG  296 (391)
T ss_pred             cccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence                              1289999999998  45566544

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.85  E-value=4.5e-21  Score=186.09  Aligned_cols=109  Identities=18%  Similarity=0.264  Sum_probs=90.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                            
T Consensus         3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence            4456789999999999999999999999999975432   233456667666                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                             +++... ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++.
T Consensus        83 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          83 IPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence                   233222 258899999999999999999999999 999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4250|consensus

Probab=99.85  E-value=9.8e-22  Score=192.47  Aligned_cols=128  Identities=20%  Similarity=0.304  Sum_probs=105.6

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------------   94 (392)
                      .+.||+|+||.||+++++.+|+.||||.+++.. ....+++.+|+++                                 
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE   97 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME   97 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence            346999999999999999999999999998743 4667888899888                                 


Q ss_pred             --------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCce--EEEeccccchhccc
Q psy6828          95 --------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWV--VKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~--~kl~DFGla~~~~~  160 (392)
                              .+++...  ..|++.++..++.++..||.|||++|| +||||||.||++-  .+|+  .||+|||.|+.+.+
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I-vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d  176 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI-VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD  176 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCCCCcEEEeecCCCceEEeeecccccccCCC
Confidence                    2222111  149999999999999999999999999 9999999999984  3343  79999999998766


Q ss_pred             cccc-----------------------cccccceeeeeee
Q psy6828         161 AEYT-----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~~~~-----------------------~~d~~s~g~~~~~  177 (392)
                      ++..                       ..|-||||+++|+
T Consensus       177 ~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~  216 (732)
T KOG4250|consen  177 NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYE  216 (732)
T ss_pred             CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHH
Confidence            5432                       2299999999999

>KOG0033|consensus

Probab=99.84  E-value=5.5e-23  Score=177.88  Aligned_cols=198  Identities=20%  Similarity=0.205  Sum_probs=144.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------H
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------D   95 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~   95 (392)
                      ..|-....||+|.|++|+++.+..+|+.+|+|.++....  ...+.+.+|+.|                          +
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            334456679999999999999999999999999976654  457788899888                          2


Q ss_pred             HhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhcccccc-
Q psy6828          96 IMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAEY-  163 (392)
Q Consensus        96 ~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~-  163 (392)
                      ++...+        .-+++..+..+++||+++|.|+|.++| +|||+||+|+|+.+.   ..+||+|||++..+.+... 
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~I-vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGI-VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence            222111        147888899999999999999999999 999999999999654   4599999999987653321 


Q ss_pred             ---------------------ccccccceeeeeee-----ccCCCCcc----------cccc---------cccchhhhc
Q psy6828         164 ---------------------TGTDQHSFLQHTYH-----VNRAGSTE----------SLHC---------KCDEALLFE  198 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~-----~~~~~~~~----------~~d~---------~~~~~lL~~  198 (392)
                                           ...|+|+.|+++|.     .|.+.++.          ..|+         .+...++.+
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvrr  249 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRR  249 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHH
Confidence                                 23399999999988     22222111          1111         456778888


Q ss_pred             cCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHH
Q psy6828         199 MLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY  252 (392)
Q Consensus       199 ~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~  252 (392)
                      ||.-..++++...+.+..++          |++-...+......+.++.|..|-
T Consensus       250 ML~~dP~kRIta~EAL~HpW----------i~~r~~~As~~H~~dtvd~lrkfN  293 (355)
T KOG0033|consen  250 MLTVNPKKRITADEALKHPW----------ICNRERVASAIHRQDTVDCLKKFN  293 (355)
T ss_pred             HhccChhhhccHHHHhCCch----------hcchHHHHHHhhhHHHHHHHHHhh
Confidence            88888888887766666665          344455555666667777776654

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.84  E-value=2.3e-21  Score=184.73  Aligned_cols=130  Identities=19%  Similarity=0.230  Sum_probs=104.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.||+|.+.+...   ...+.+.+|+.+                            
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   99 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF   99 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence            4456779999999999999999999999999975432   334567777766                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......     
T Consensus       100 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g  177 (329)
T PTZ00263        100 VVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDI-IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG  177 (329)
T ss_pred             CCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence                   222222 268999999999999999999999999 999999999999999999999999987543221     


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       178 t~~y~aPE~~~~~~~~~~~DiwslG~il~e  207 (329)
T PTZ00263        178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYE  207 (329)
T ss_pred             ChhhcCHHHHcCCCCCCcceeechHHHHHH
Confidence                           123488888888888

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=3.6e-21  Score=182.00  Aligned_cols=124  Identities=19%  Similarity=0.221  Sum_probs=99.4

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~----------------------------------   94 (392)
                      ||+|+||.||++.+..+++.||+|.+.+..   ......+.+|+.+                                  
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999999999999999997532   2334456667665                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----------  162 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----------  162 (392)
                       +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......           
T Consensus        81 ~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  158 (312)
T cd05585          81 FHHLQR-EGRFDLSRARFYTAELLCALENLHKFNV-IYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE  158 (312)
T ss_pred             HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcc
Confidence             23322 2368999999999999999999999999 999999999999999999999999987532110           


Q ss_pred             ------------cccccccceeeeeee
Q psy6828         163 ------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------~~~~d~~s~g~~~~~  177 (392)
                                  ....|+||+|+++|+
T Consensus       159 y~aPE~~~~~~~~~~~DvwslGvil~e  185 (312)
T cd05585         159 YLAPELLLGHGYTKAVDWWTLGVLLYE  185 (312)
T ss_pred             cCCHHHHcCCCCCCccceechhHHHHH
Confidence                        112489999998888

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.84  E-value=5.3e-21  Score=182.28  Aligned_cols=111  Identities=19%  Similarity=0.274  Sum_probs=92.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+|+.||+|.+++...   ...+.+..|+.+                             
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (330)
T cd05601           4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQ   83 (330)
T ss_pred             eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCC
Confidence            345679999999999999999999999999976432   234456666665                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++......+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||++...
T Consensus        84 ~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i-~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          84 PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY-VHRDIKPENVLIDRTGHIKLADFGSAARL  152 (330)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EcccCchHheEECCCCCEEeccCCCCeEC
Confidence                  3444433469999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.84  E-value=2.3e-21  Score=181.17  Aligned_cols=112  Identities=22%  Similarity=0.357  Sum_probs=92.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.+                              
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   86 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD   86 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence            5556789999999999999999999999999875432 223455667666                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871          87 SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI-LHRDLKPQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEECcCcceeec
Confidence                3333333357899999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.84  E-value=2.9e-21  Score=187.78  Aligned_cols=110  Identities=19%  Similarity=0.265  Sum_probs=91.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||++.+..+++.||||++.+...   ...+.+.+|+.+                            
T Consensus         3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~   82 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (381)
T ss_pred             ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence            3456679999999999999999999999999976532   334567777776                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             +++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~gi-vHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          83 IPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGF-IHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence                   222222 258999999999999999999999999 9999999999999999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0986|consensus

Probab=99.84  E-value=4.3e-22  Score=185.62  Aligned_cols=159  Identities=18%  Similarity=0.170  Sum_probs=123.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-------------------------   94 (392)
                      ...+...+.||+||||.||-|....||+-||+|++.++.+.   ......+|..+                         
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            34456688999999999999999999999999999766442   22334555555                         


Q ss_pred             -HHhhc----------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828          95 -DIMEN----------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        95 -~~l~~----------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  163 (392)
                       ++|+.          ++..|++..+..++.||++||++||+.+| +.|||||+|||||+.|+++|+|+|+|..+.....
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i-VYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI-VYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce-eeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence             33333          33359999999999999999999999999 9999999999999999999999999988776554


Q ss_pred             ccccccceeeeeeeccC----CCCcccccccccchhhhccCCHHHH
Q psy6828         164 TGTDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPRSVA  205 (392)
Q Consensus       164 ~~~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~~v~  205 (392)
                      ....   .|+..|++|+    ..++-+.|++..+.+++.|+..+..
T Consensus       343 ~~~r---vGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sP  385 (591)
T KOG0986|consen  343 IRGR---VGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSP  385 (591)
T ss_pred             cccc---cCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCc
Confidence            3333   4777777666    2345566777888888777754433

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.84  E-value=5.6e-21  Score=182.02  Aligned_cols=106  Identities=19%  Similarity=0.265  Sum_probs=88.6

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhcC-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMENE-  100 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~~-  100 (392)
                      .||+|+||.||++.+..+++.||+|++.+...   .....+.+|+.+                          +|+.++ 
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            58999999999999999999999999975432   234456667665                          222221 


Q ss_pred             -------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         101 -------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       101 -------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             ...+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDikp~NIll~~~~~~kL~DfG~~~~  144 (328)
T cd05593          82 LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI-VYRDLKLENLMLDKDGHIKITDFGLCKE  144 (328)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecccCHHHeEECCCCcEEEecCcCCcc
Confidence                   2258999999999999999999999999 9999999999999999999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0584|consensus

Probab=99.84  E-value=1.5e-21  Score=188.97  Aligned_cols=139  Identities=20%  Similarity=0.322  Sum_probs=104.9

Q ss_pred             cccccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC-CChhHHHHH
Q psy6828          10 GLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK-KSVDITRAM   88 (392)
Q Consensus        10 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~   88 (392)
                      .++++..||.+|+.|+|||||++|.+|.+...                           ...+-|-.+.. ..+.     
T Consensus        84 ~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n---------------------------~~in~iTEL~TSGtLr-----  131 (632)
T KOG0584|consen   84 ELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN---------------------------KTINFITELFTSGTLR-----  131 (632)
T ss_pred             HHHHHHHHHHHHccCCCCceeeeeeheecCCC---------------------------ceeeeeeecccCCcHH-----
Confidence            35789999999999999999999999998742                           11111222211 1111     


Q ss_pred             HHHHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCC-ceEEEeccccchhccccccc--
Q psy6828          89 KKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEYT--  164 (392)
Q Consensus        89 ~~E~~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~~--  164 (392)
                            .|.+.. +..+.+.++.|++||+.||.|||++.+ |||||||.+||+++.+ |.+||+|+|||.........  
T Consensus       132 ------~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv  204 (632)
T KOG0584|consen  132 ------EYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV  204 (632)
T ss_pred             ------HHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence                  122222 268889999999999999999998754 6999999999999765 89999999999976543322  


Q ss_pred             ------------------cccccceeeeeee--ccCCCCcccc
Q psy6828         165 ------------------GTDQHSFLQHTYH--VNRAGSTESL  187 (392)
Q Consensus       165 ------------------~~d~~s~g~~~~~--~~~~~~~~~~  187 (392)
                                        ..||||||+++.|  +.+|||.+..
T Consensus       205 IGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~  247 (632)
T KOG0584|consen  205 IGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECT  247 (632)
T ss_pred             ccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhC
Confidence                              1299999999999  7789988743

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=3.3e-21  Score=186.17  Aligned_cols=110  Identities=19%  Similarity=0.254  Sum_probs=91.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||||++.+...   .....+.+|+.+                             
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~   83 (364)
T cd05599           4 ESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYL   83 (364)
T ss_pred             eEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCC
Confidence            345679999999999999999999999999975432   234456667666                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        84 ~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          84 PGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGY-IHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEeecccceec
Confidence                  223222 268999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=4.6e-21  Score=186.15  Aligned_cols=109  Identities=19%  Similarity=0.280  Sum_probs=90.4

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHh
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l   97 (392)
                      ...+.||+|+||.||++.+..+++.||||++.+...   ...+.+.+|+.+                          +|+
T Consensus         4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~   83 (377)
T cd05629           4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFL   83 (377)
T ss_pred             eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCC
Confidence            345679999999999999999999999999865432   234556777766                          222


Q ss_pred             hc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          98 EN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        98 ~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      ..        ....+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus        84 ~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi-vHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          84 PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGF-IHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEECCCCCEEEeeccccc
Confidence            21        12258899999999999999999999999 999999999999999999999999986

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.84  E-value=4.3e-21  Score=182.40  Aligned_cols=126  Identities=17%  Similarity=0.211  Sum_probs=99.6

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN--   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~--   99 (392)
                      .||+|+||.||++.+..+|+.||+|++.+...   .....+.+|+.+                          +|+..  
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            58999999999999999999999999975422   233445566655                          22222  


Q ss_pred             ------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828         100 ------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----------  162 (392)
Q Consensus       100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----------  162 (392)
                            ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......           
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          82 LFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence                  12258999999999999999999999999 999999999999999999999999986421110           


Q ss_pred             ------------cccccccceeeeeee
Q psy6828         163 ------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------~~~~d~~s~g~~~~~  177 (392)
                                  ....|+||+|+++|+
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~e  187 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHH
Confidence                        112499999999988

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.84  E-value=8e-21  Score=183.31  Aligned_cols=109  Identities=21%  Similarity=0.269  Sum_probs=90.4

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------   94 (392)
                      ..+.||+|+||.||++.+..+++.||+|++++...   .....+.+|+.+                              
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~   84 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP   84 (360)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence            34679999999999999999999999999975332   234456667665                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        85 gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~gi-vHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          85 GGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGF-IHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EccCCCHHHEEECCCCCEEEeeccCCccc
Confidence                 222222 368999999999999999999999999 99999999999999999999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.84  E-value=4.4e-21  Score=186.57  Aligned_cols=109  Identities=19%  Similarity=0.264  Sum_probs=91.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.+.+...   .....+.+|+.+                            
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~   82 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY   82 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence            4456779999999999999999999999999976432   334566777766                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                             +++.+. ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus        83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~i-vHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          83 IPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEeECCCCc
Confidence                   222222 258999999999999999999999999 999999999999999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.84  E-value=5.9e-21  Score=181.28  Aligned_cols=126  Identities=20%  Similarity=0.213  Sum_probs=98.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||.||+|.+..+++.||+|.+.+...   ...+.+..|..+                           +++.. 
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            58999999999999999999999999975422   223344455444                           22221 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-----------  161 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-----------  161 (392)
                             ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....           
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGV-IYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence                   12258899999999999999999999999 99999999999999999999999988642110           


Q ss_pred             ------------ccccccccceeeeeee
Q psy6828         162 ------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------~~~~~d~~s~g~~~~~  177 (392)
                                  .....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYE  188 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHH
Confidence                        0123499999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.84  E-value=3.8e-21  Score=182.87  Aligned_cols=129  Identities=19%  Similarity=0.227  Sum_probs=100.5

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHh
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIM   97 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l   97 (392)
                      ..+.||+|+||.||+|.+..+++.||+|++.+...   ...+.+..|..+                           +++
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   83 (324)
T cd05587           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV   83 (324)
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence            34569999999999999999999999999975422   233455556554                           222


Q ss_pred             hc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc--------
Q psy6828          98 EN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--------  161 (392)
Q Consensus        98 ~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~--------  161 (392)
                      ..        ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....        
T Consensus        84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  162 (324)
T cd05587          84 NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC  162 (324)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeec
Confidence            21        12258999999999999999999999999 99999999999999999999999998642100        


Q ss_pred             ---------------ccccccccceeeeeee
Q psy6828         162 ---------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ---------------~~~~~d~~s~g~~~~~  177 (392)
                                     .....|+||+|+++|+
T Consensus       163 gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  193 (324)
T cd05587         163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE  193 (324)
T ss_pred             CCccccChhhhcCCCCCcccchhhhHHHHHH
Confidence                           0123499999999998

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.84  E-value=1.1e-20  Score=179.65  Aligned_cols=126  Identities=21%  Similarity=0.264  Sum_probs=96.8

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||+||++.+..+|+.||+|++.+...   .....+..|...                           +++.. 
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            58999999999999999999999999975432   122334444322                           22221 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                             ....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......          
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi-vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence                   12268999999999999999999999999 999999999999999999999999986421110          


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYE  188 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhh
Confidence                         112488888888888

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.3e-20  Score=179.67  Aligned_cols=125  Identities=20%  Similarity=0.233  Sum_probs=95.4

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH-----------------------------HHhhc
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI-----------------------------DIMEN   99 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-----------------------------~~l~~   99 (392)
                      ||+|+||+||++.+..+++.||+|++.+....   .......|..+                             +|+..
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999999999999999999754321   11222223222                             22211


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc----------
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----------  161 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----------  161 (392)
                              ....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.....          
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt  159 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI-VYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT  159 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence                    12358999999999999999999999999 99999999999999999999999998642110          


Q ss_pred             --------------ccccccccceeeeeee
Q psy6828         162 --------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 --------------~~~~~d~~s~g~~~~~  177 (392)
                                    .....|+||+|+++|+
T Consensus       160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~e  189 (330)
T cd05586         160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFE  189 (330)
T ss_pred             ccccCHHHHcCCCCCCCccceeccccEEEE
Confidence                          0122489999999888

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0604|consensus

Probab=99.83  E-value=4.3e-21  Score=170.55  Aligned_cols=129  Identities=19%  Similarity=0.222  Sum_probs=104.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      .+..+....||-|-.|+|..|.++.+|+++|+|++...     ...++|++.                            
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL  135 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL  135 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence            34455566799999999999999999999999998644     334556555                            


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~  158 (392)
                                   .+-++++..|+|.++..|++||+.|+.|||+.+| .||||||+|+|...   +..+||+|||+|+..
T Consensus       136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nI-AHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNI-AHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcch-hhccCChhheeeecCCCCcceEeccccccccc
Confidence                         2222345569999999999999999999999999 99999999999964   456999999999976


Q ss_pred             cccccc----------------------cccccceeeeeee
Q psy6828         159 RDAEYT----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~~~----------------------~~d~~s~g~~~~~  177 (392)
                      ......                      ..|+||+|+++|.
T Consensus       215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYI  255 (400)
T KOG0604|consen  215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  255 (400)
T ss_pred             CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHH
Confidence            532211                      2399999999998

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.5e-21  Score=182.56  Aligned_cols=112  Identities=18%  Similarity=0.261  Sum_probs=92.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||||++++...   .....+..|+.+                            
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            3445679999999999999999999999999975432   233456666655                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus        83 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~  152 (350)
T cd05573          83 MPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGF-IHRDIKPDNILIDADGHIKLADFGLCKKMN  152 (350)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence                   222222 368999999999999999999999999 999999999999999999999999987654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.83  E-value=1.4e-20  Score=178.98  Aligned_cols=126  Identities=21%  Similarity=0.258  Sum_probs=98.0

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||+||++.+..+|+.||+|++.+...   .....+..|...                           +++.. 
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG   81 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence            58999999999999999999999999975422   222334444322                           22221 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                             ....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......          
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi-vH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI-VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence                   22368999999999999999999999999 999999999999999999999999987421110          


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYE  188 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehh
Confidence                         123499999999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.83  E-value=9.4e-21  Score=180.22  Aligned_cols=126  Identities=19%  Similarity=0.237  Sum_probs=96.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||+||++.+..+++.||+|++.+...   .....+..|...                           +++.. 
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            58999999999999999999999999975432   112233333221                           22211 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                             ....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......          
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi-iHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence                   12258889999999999999999999999 999999999999999999999999987431110          


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYE  188 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHH
Confidence                         113499999999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0577|consensus

Probab=99.83  E-value=4e-21  Score=184.18  Aligned_cols=150  Identities=22%  Similarity=0.311  Sum_probs=120.2

Q ss_pred             eccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----
Q psy6828          23 LVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----   94 (392)
Q Consensus        23 ~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----   94 (392)
                      .|+.|.|-..    +....+.++|.+.+.||-|+||.||-+++..+.+.||||+++-...   .....+.+|+..     
T Consensus         9 slKDPeiA~L----F~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~   84 (948)
T KOG0577|consen    9 SLKDPEIADL----FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR   84 (948)
T ss_pred             CCCCchHHHH----HccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc
Confidence            4556665322    2223356778889999999999999999999999999999986544   344556777766     


Q ss_pred             -----------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828          95 -----------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW  145 (392)
Q Consensus        95 -----------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~  145 (392)
                                                   |+++-...++.+-++..|+.+.+.||.||||.+. ||||||..||||++.|
T Consensus        85 HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~-IHRDiKAGNILLse~g  163 (948)
T KOG0577|consen   85 HPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR-IHRDIKAGNILLSEPG  163 (948)
T ss_pred             CCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH-HhhhccccceEecCCC
Confidence                                         5555556689999999999999999999999999 9999999999999999


Q ss_pred             eEEEeccccchhcccccc----------------------ccccccceeeeeee
Q psy6828         146 VVKLADFGLTEFKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       146 ~~kl~DFGla~~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      .+||+|||.+....+...                      ...|+||+|+++.|
T Consensus       164 ~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIE  217 (948)
T KOG0577|consen  164 LVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  217 (948)
T ss_pred             eeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhh
Confidence            999999999876543221                      12389999999888

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=9.9e-21  Score=180.65  Aligned_cols=130  Identities=24%  Similarity=0.253  Sum_probs=103.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.||||++.+...   ...+.+.+|+.+                            
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            3345679999999999999999999999999975432   334556677666                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......     
T Consensus        83 ~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g  160 (333)
T cd05600          83 VPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGY-IHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG  160 (333)
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence                   233222 258999999999999999999999999 999999999999999999999999987543210     


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~e  190 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYE  190 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhh
Confidence                           123488888888887

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0984|consensus

Probab=99.83  E-value=8.2e-21  Score=160.62  Aligned_cols=137  Identities=19%  Similarity=0.262  Sum_probs=108.8

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------   94 (392)
                      ....||+|+||.|-+-++..+|+..|+|.+...-. +..++..+|+.+                                
T Consensus        50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t  129 (282)
T KOG0984|consen   50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT  129 (282)
T ss_pred             hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence            36679999999999999999999999999975432 456678888887                                


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY----  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~----  163 (392)
                             +.++.+ ..++|..+-+|+..+..||.|||++=-+||||+||+|||++.+|++|+||||+|..+.++.-    
T Consensus       130 Sldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~d  208 (282)
T KOG0984|consen  130 SLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMD  208 (282)
T ss_pred             hHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHh
Confidence                   223333 36899999999999999999999864339999999999999999999999999876533211    


Q ss_pred             ----------------------ccccccceeeeeee--ccCCCCcc
Q psy6828         164 ----------------------TGTDQHSFLQHTYH--VNRAGSTE  185 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~--~~~~~~~~  185 (392)
                                            ..+|+||+|+.+.|  ...|++..
T Consensus       209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                                  12399999999998  44455443

>KOG0201|consensus

Probab=99.83  E-value=2.5e-20  Score=173.55  Aligned_cols=149  Identities=19%  Similarity=0.250  Sum_probs=111.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------H
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------D   95 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~   95 (392)
                      ...|.....+|+|+||.||+|.+..+++.||||+++.... ...+.+++|+.+                          +
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            4455566889999999999999999999999999976543 345566677666                          2


Q ss_pred             Hhh---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccc
Q psy6828          96 IME---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT  166 (392)
Q Consensus        96 ~l~---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~  166 (392)
                      |+.         .+. .+++.++..++++++.||.|||+++. +|||||+.|||+..+|.+|++|||.+...+...... 
T Consensus        92 y~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~~k-iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-  168 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSEKK-IHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-  168 (467)
T ss_pred             HhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhcce-ecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence            222         222 35888999999999999999999999 999999999999999999999999998776544332 


Q ss_pred             cccceeeeeeeccC----CCCcccccccccchh
Q psy6828         167 DQHSFLQHTYHVNR----AGSTESLHCKCDEAL  195 (392)
Q Consensus       167 d~~s~g~~~~~~~~----~~~~~~~d~~~~~~l  195 (392)
                       ...+|++.||+||    ..+..+.|+|.++..
T Consensus       169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGIT  200 (467)
T KOG0201|consen  169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGIT  200 (467)
T ss_pred             -ccccccccccchhhhccccccchhhhhhhhHH
Confidence             2224555555544    234445555555433

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=1.8e-20  Score=185.47  Aligned_cols=130  Identities=22%  Similarity=0.271  Sum_probs=98.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++......    ..+|+.+                            
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY----KNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            34577788999999999999999999999999988654321    1223333                            


Q ss_pred             --------------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccch
Q psy6828          95 --------------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTE  156 (392)
Q Consensus        95 --------------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~  156 (392)
                                    +++.   .....+++..+..++.|++.||.|||++++ +||||||+|||++.++ .+||+|||+|+
T Consensus       141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I-iHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI-CHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCcCHHHEEEcCCCCceeeeccccch
Confidence                          1111   123358888999999999999999999999 9999999999998664 69999999997


Q ss_pred             hccccc-----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                       ....|+||+|+++|+
T Consensus       220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  263 (440)
T PTZ00036        220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE  263 (440)
T ss_pred             hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            543211                       112388888888887

>KOG1187|consensus

Probab=99.83  E-value=1.2e-20  Score=180.54  Aligned_cols=114  Identities=27%  Similarity=0.440  Sum_probs=93.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------HHhh
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------DIME   98 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------~~l~   98 (392)
                      +-..+.+|+|+||.||+|. ..+|+.||||++.....+...+|.+|+.+                           +|+.
T Consensus        77 Fs~~~~ig~Ggfg~VYkG~-l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~  155 (361)
T KOG1187|consen   77 FSESNLIGEGGFGTVYKGV-LSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMP  155 (361)
T ss_pred             CchhcceecCCCeEEEEEE-ECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccC
Confidence            3345789999999999998 44559999998876654313459999998                           4444


Q ss_pred             cCCc----------CCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          99 NEDV----------KLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        99 ~~~~----------~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                      ++++          .++|....+|+.+++.||.|||+..  .|+||||||+|||||+++++||+|||+|+....
T Consensus       156 nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  156 NGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             CCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence            4332          7899999999999999999999854  249999999999999999999999999976654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.83  E-value=1.7e-20  Score=178.08  Aligned_cols=126  Identities=21%  Similarity=0.246  Sum_probs=96.8

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||.||++.+..+++.||+|.+.+...   .....+..|...                           +++.. 
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            58999999999999999999999999975432   222334444322                           22221 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                             ....+++..+..++.||+.||.|||++++ +||||||+||+++.++.+||+|||+++......          
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence                   12358899999999999999999999999 999999999999999999999999987421110          


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYE  188 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhh
Confidence                         113488888888888

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.83  E-value=9.8e-21  Score=179.94  Aligned_cols=108  Identities=20%  Similarity=0.292  Sum_probs=86.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhh
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIME   98 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~   98 (392)
                      .+.||+|+||.||++.+..+++.||+|.+.+...   ...+....|..+                           +++.
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence            4569999999999999999999999999975432   122334444433                           2222


Q ss_pred             c--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          99 N--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        99 ~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      .        ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        85 ~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kL~DfG~~~~  150 (323)
T cd05616          85 GGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-EecCCCHHHeEECCCCcEEEccCCCcee
Confidence            1        11258999999999999999999999999 9999999999999999999999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.83  E-value=8.3e-21  Score=179.92  Aligned_cols=126  Identities=22%  Similarity=0.282  Sum_probs=97.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||.||++.+..+|+.||+|.+++...   ...+....|..+                           +++.. 
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g   81 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence            58999999999999999999999999975422   122334444433                           22221 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-----------  161 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-----------  161 (392)
                             ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....           
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          82 DLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI-IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence                   12268999999999999999999999999 99999999999999999999999988642100           


Q ss_pred             ------------ccccccccceeeeeee
Q psy6828         162 ------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------~~~~~d~~s~g~~~~~  177 (392)
                                  .....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~e  188 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYE  188 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHH
Confidence                        0113499999999988

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.83  E-value=3e-20  Score=173.30  Aligned_cols=131  Identities=18%  Similarity=0.228  Sum_probs=103.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.+.....  ...+.+.+|+.+                             
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            3445679999999999999999999999999875432  234556667666                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                           +.+......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++......       
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (287)
T cd07848          83 EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI-VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEY  161 (287)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccc
Confidence                 2222223368999999999999999999999999 999999999999999999999999987543211       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ...+|+||+|+++|+
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e  193 (287)
T cd07848         162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGE  193 (287)
T ss_pred             ccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence                             112488888888888

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.83  E-value=1.8e-20  Score=177.88  Aligned_cols=126  Identities=21%  Similarity=0.281  Sum_probs=97.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||.||++.++.+++.||||.+.+...   ...+.+..|..+                           +|+.. 
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            58999999999999999999999999975422   223344455443                           22211 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                             ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......          
T Consensus        82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~i-vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence                   12368999999999999999999999999 999999999999999999999999987431110          


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYE  188 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHH
Confidence                         112488888888887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.83  E-value=9.4e-21  Score=183.42  Aligned_cols=113  Identities=18%  Similarity=0.182  Sum_probs=91.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------H
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------D   95 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~   95 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+..|+.+                          +
T Consensus        44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05621          44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME  123 (370)
T ss_pred             HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence            35556779999999999999999999999999965322   233446667666                          2


Q ss_pred             HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      ++..+       ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus       124 y~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~I-vHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         124 YMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL-IHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             CCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEECCCCCEEEEecccceec
Confidence            22211       1158899999999999999999999999 99999999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.83  E-value=1.1e-20  Score=180.99  Aligned_cols=130  Identities=18%  Similarity=0.177  Sum_probs=102.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecC-cEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      |...+.||+|+||.||+|.+..++ ..||+|.+.+...   ...+.+.+|+.+                           
T Consensus        32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~E  111 (340)
T PTZ00426         32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLE  111 (340)
T ss_pred             cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEe
Confidence            444677999999999999877655 6899999865322   234456677666                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......    
T Consensus       112 y~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~  189 (340)
T PTZ00426        112 FVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNI-VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC  189 (340)
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence                    233222 268999999999999999999999999 999999999999999999999999987543211    


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  220 (340)
T PTZ00426        190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYE  220 (340)
T ss_pred             CChhhcCHHHHhCCCCCccccccchhhHHHH
Confidence                            123499999999999

>KOG0599|consensus

Probab=99.83  E-value=2e-21  Score=170.64  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=97.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--------hhHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--------VDITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------~~~~~~~~~E~~~---------------------   94 (392)
                      ..|.....+|+|..++|.+|.++.+|+.+|+|++....        ....+.-.+|+.|                     
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            34556778999999999999999999999999996422        1345566677777                     


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     +|+...- .+++++.+.+++|+++|+.|||.++| +||||||+|||++++.++||+|||+|..+.
T Consensus        97 F~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~I-VHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNI-VHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhh-hhcccChhheeeccccceEEeccceeeccC
Confidence                           4443332 69999999999999999999999999 999999999999999999999999998876


Q ss_pred             ccc
Q psy6828         160 DAE  162 (392)
Q Consensus       160 ~~~  162 (392)
                      ...
T Consensus       175 ~Ge  177 (411)
T KOG0599|consen  175 PGE  177 (411)
T ss_pred             Cch
Confidence            554

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.3e-20  Score=179.70  Aligned_cols=111  Identities=17%  Similarity=0.218  Sum_probs=91.4

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|..+                             
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   83 (331)
T cd05597           4 EILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYY   83 (331)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecC
Confidence            345679999999999999999999999999975322   233445666655                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++......+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~  152 (331)
T cd05597          84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY-VHRDIKPDNVLLDKNGHIRLADFGSCLRL  152 (331)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EECCCCHHHEEECCCCCEEEEECCceeec
Confidence                  3333333468999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.83  E-value=1.1e-20  Score=179.67  Aligned_cols=108  Identities=21%  Similarity=0.273  Sum_probs=87.9

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhh
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIME   98 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~   98 (392)
                      .+.||+|+||.||++.+..+|+.||+|++.+...   ...+.+..|..+                           +|+.
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~   84 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN   84 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence            3569999999999999999999999999975422   222344455444                           2222


Q ss_pred             cC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          99 NE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        99 ~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      .+        ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        85 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i-vHrDikp~Nill~~~~~ikL~Dfg~~~~  150 (323)
T cd05615          85 GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE  150 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeccccccc
Confidence            21        1258999999999999999999999999 9999999999999999999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.82  E-value=2e-20  Score=178.37  Aligned_cols=107  Identities=23%  Similarity=0.297  Sum_probs=88.0

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN   99 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~   99 (392)
                      +.||+|+||.||++.+..+++.||+|.+.+...   ...+.+..|..+                           +++..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            358999999999999999999999999976422   233445556544                           22221


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dikp~Nili~~~~~~kL~DfG~~~~  145 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKE  145 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence                    12368999999999999999999999999 9999999999999999999999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.82  E-value=1.5e-20  Score=181.25  Aligned_cols=134  Identities=21%  Similarity=0.241  Sum_probs=104.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.||+|+||.||++.+..+|+.||+|.+.+...  ...+.+.+|+.+                          
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            4556777889999999999999999999999999975422  334556667666                          


Q ss_pred             ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                            +++..     ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876         100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence                  01110     01147888899999999999999999999 999999999999999999999999987532211 


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  214 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  214 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHH
Confidence                                 112489999998888

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.2e-20  Score=179.02  Aligned_cols=133  Identities=22%  Similarity=0.317  Sum_probs=103.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------HHhhc---------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------DIMEN---------   99 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~~l~~---------   99 (392)
                      ..|...+.||+|+||.||++.+..+++.||||.+.+...  ...+.+.+|+.+             ++...         
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE   94 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence            446667889999999999999999999999999975432  233445566665             11100         


Q ss_pred             ----------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828         100 ----------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus       100 ----------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                      ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus        95 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  173 (343)
T cd07878          95 VYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGI-IHRDLKPSNVAVNEDCELRILDFGLARQADDEMT  173 (343)
T ss_pred             EEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecccCChhhEEECCCCCEEEcCCccceecCCCcC
Confidence                            11258999999999999999999999999 999999999999999999999999987543211 


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (343)
T cd07878         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             CccccccccCchHhcCCccCCchhhhHhHHHHHHH
Confidence                                112478888888777

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.82  E-value=1.8e-20  Score=178.70  Aligned_cols=108  Identities=19%  Similarity=0.266  Sum_probs=86.8

Q ss_pred             ccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH--------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI--------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~--------------------------   94 (392)
                      ..+.||+|+||.||++.+.   .+++.||+|.+.+...    ...+.+.+|..+                          
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (332)
T cd05614           4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI   83 (332)
T ss_pred             EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence            3567999999999998864   4789999999965322    223445566655                          


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        84 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-vHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          84 LDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGI-VYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-EecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence                      222222 258999999999999999999999999 9999999999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.82  E-value=1.9e-20  Score=178.27  Aligned_cols=107  Identities=21%  Similarity=0.282  Sum_probs=88.5

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN   99 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~   99 (392)
                      +.||+|+||+||++.+..+++.||+|++++...   ...+.+.+|..+                           +++..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            358999999999999999999999999976432   233445666554                           22221


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~~~~  145 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI-IYRDLKLDNVLLDADGHIKLTDYGMCKE  145 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEEeCCCCEEEecccccee
Confidence                    12269999999999999999999999999 9999999999999999999999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.82  E-value=2.6e-20  Score=173.32  Aligned_cols=106  Identities=23%  Similarity=0.271  Sum_probs=87.9

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc---
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN---   99 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~---   99 (392)
                      ||+|+||+||++.+..+++.||+|.+.+...   ...+.+..|+.+                          +++..   
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999999999999999999975433   223455667665                          22211   


Q ss_pred             ---------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         100 ---------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       100 ---------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               .+..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~  147 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI-IYRDLKPENVLLDNDGNVRISDLGLAVEL  147 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCccceec
Confidence                     22358999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.82  E-value=2.1e-20  Score=178.12  Aligned_cols=106  Identities=23%  Similarity=0.291  Sum_probs=87.7

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||.||++.+..+++.||+|++++...   ...+.+..|..+                           +++.. 
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            58999999999999999999999999976432   223445566554                           22211 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588          82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEECcCccccc
Confidence                   12369999999999999999999999999 9999999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG1035|consensus

Probab=99.82  E-value=2.4e-20  Score=191.67  Aligned_cols=97  Identities=28%  Similarity=0.383  Sum_probs=72.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc----cc------------cccccc
Q psy6828         105 DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD----AE------------YTGTDQ  168 (392)
Q Consensus       105 ~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~----~~------------~~~~d~  168 (392)
                      .....+++++||++||.|+|+.|+ |||||||.||+|++++.+||+|||+++....    ..            ....-.
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~gi-IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T  773 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQGI-IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT  773 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCce-eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence            366789999999999999999998 9999999999999999999999999987220    00            000122


Q ss_pred             cceeeeeeeccC-------CCCcccccccccchhhhccCCH
Q psy6828         169 HSFLQHTYHVNR-------AGSTESLHCKCDEALLFEMLPR  202 (392)
Q Consensus       169 ~s~g~~~~~~~~-------~~~~~~~d~~~~~~lL~~~lp~  202 (392)
                      -..|+.+|.+|+       ..++.++|+.+++.+|.+|+.+
T Consensus       774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP  814 (1351)
T KOG1035|consen  774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP  814 (1351)
T ss_pred             cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence            335777777665       1456677777777776666543

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.82  E-value=2.5e-20  Score=174.07  Aligned_cols=131  Identities=24%  Similarity=0.306  Sum_probs=96.8

Q ss_pred             eeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||++.+.. +++.||+|.++....  .....+.+|+.+                            
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            4456789999999999999854 468899999864322  111223334332                            


Q ss_pred             --------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                    +++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        83 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i-iH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862          83 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             cEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence                          11111 12247889999999999999999999999 999999999999999999999999987543


Q ss_pred             ccc----------------------cccccccceeeeeee
Q psy6828         160 DAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                      ....|+||+|+++|+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e  201 (290)
T cd07862         162 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE  201 (290)
T ss_pred             CCcccccccccccccChHHHhCCCCCCccchHHHHHHHHH
Confidence            211                      112488888888887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.82  E-value=1.7e-20  Score=178.95  Aligned_cols=111  Identities=17%  Similarity=0.190  Sum_probs=90.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+.+...   .....+..|..+                             
T Consensus         4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~   83 (332)
T cd05623           4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYY   83 (332)
T ss_pred             eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEecc
Confidence            345679999999999999999999999999965322   223345556554                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.+....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus        84 ~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-iHrDlkp~Nili~~~~~~kL~DfG~a~~~  152 (332)
T cd05623          84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY-VHRDIKPDNILMDMNGHIRLADFGSCLKL  152 (332)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEECCCCCEEEeecchheec
Confidence                  4444433468999999999999999999999999 99999999999999999999999998643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=2.9e-20  Score=186.31  Aligned_cols=134  Identities=18%  Similarity=0.210  Sum_probs=105.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||+||++.+..+|+.||||.+.....  .....+.+|+.+                          
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~  110 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN  110 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence            4667778899999999999999999999999999976533  334455566543                          


Q ss_pred             --------HHhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 --------DIMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 --------~~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                              +|+..            ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus       111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~I-iHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHM-IHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEeCCCCEEEEeccc
Confidence                    11111            12258889999999999999999999999 9999999999999999999999999


Q ss_pred             chhccccc-------------------------cccccccceeeeeee
Q psy6828         155 TEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       155 a~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ++......                         ....|+||||+++|+
T Consensus       190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilye  237 (496)
T PTZ00283        190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYE  237 (496)
T ss_pred             CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            87542210                         112499999999998

>KOG0194|consensus

Probab=99.82  E-value=6.5e-20  Score=177.50  Aligned_cols=128  Identities=24%  Similarity=0.337  Sum_probs=108.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCc---E-EEEEEcCCCC---hhHHHHHHHHHHH---------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGR---I-FAIKRIPKKS---VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~---~-vAiK~~~~~~---~~~~~~~~~E~~~---------------------------   94 (392)
                      ...||+|+||.||+|..+..+.   . ||||......   .....++.+|.++                           
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE  241 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME  241 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence            3789999999999999876533   3 8999998532   4677889999998                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +||+.....++..+...++.+.++||.|||++++ |||||-.+|+|++.++.+||+|||+++.-....    
T Consensus       242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~-IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~  320 (474)
T KOG0194|consen  242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC-IHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF  320 (474)
T ss_pred             ecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC-cchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence                    7777665579999999999999999999999999 999999999999999999999999998653111    


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ...+||||||+++||
T Consensus       321 ~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E  354 (474)
T KOG0194|consen  321 LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE  354 (474)
T ss_pred             cccCcceecChhhhccCccccccchhheeeeEEe
Confidence                               124599999999999

>KOG1989|consensus

Probab=99.82  E-value=3.1e-20  Score=186.50  Aligned_cols=114  Identities=20%  Similarity=0.294  Sum_probs=98.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ......+.|.+|||+.||++.+...|..||+|++-......++.+.+|+.+                             
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            445567789999999999999888889999999987788888999999998                             


Q ss_pred             --------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                    ++|+. .+..|++.++++|++|+++|+.+||.... |||||||-+|+||..+|+.||||||.+..
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence                          33331 22259999999999999999999998763 49999999999999999999999999864

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.82  E-value=2.1e-20  Score=179.96  Aligned_cols=134  Identities=22%  Similarity=0.250  Sum_probs=103.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.||+|+||.||++.+..+++.||||.+.....  ...+.+.+|+.+                          
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            3456667789999999999999999999999999975432  334455666655                          


Q ss_pred             ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                            +++..     ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus        96 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  174 (355)
T cd07874          96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  174 (355)
T ss_pred             eeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence                  11111     01137888899999999999999999999 999999999999999999999999997643221 


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e  210 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  210 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence                                 112388888888877

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.82  E-value=1.7e-20  Score=178.34  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=88.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------HH
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------DI   96 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------~~   96 (392)
                      .+.||+|+||.||++.+..+++.||||.+++...   ...+.+.+|..+                             ++
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~   83 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY   83 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence            4569999999999999999999999999975432   233455555443                             22


Q ss_pred             hhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          97 MEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        97 l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +..       ....+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++.
T Consensus        84 ~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-vHrdlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05589          84 AAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKI-VYRDLKLDNLLLDTEGFVKIADFGLCKE  150 (324)
T ss_pred             CCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecCCCHHHeEECCCCcEEeCcccCCcc
Confidence            221       12268999999999999999999999999 9999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.82  E-value=2.7e-20  Score=179.89  Aligned_cols=134  Identities=22%  Similarity=0.249  Sum_probs=104.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.||+|+||.||++++..+++.||||++.+...  ...+.+.+|+.+                          
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            4567778899999999999999999999999999975422  333455666655                          


Q ss_pred             ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                            +++..     ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             eEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCe-ecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence                  00000     01136788899999999999999999999 999999999999999999999999997543221 


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  217 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  217 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHH
Confidence                                 112499999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0586|consensus

Probab=99.81  E-value=3.8e-20  Score=178.94  Aligned_cols=132  Identities=22%  Similarity=0.293  Sum_probs=113.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|.|++|.++++..++..||||.+++....  .+..+.+|+.+                           
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e  135 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME  135 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence            3466688899999999999999999999999999987763  34558888888                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccc-
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTG-  165 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~-  165 (392)
                              +|+.+.+ ...+.++..++.|+.+|++|||++++ +|||||.+||||+.+.++||+|||++.++....... 
T Consensus       136 ya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~i-vHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt  213 (596)
T KOG0586|consen  136 YASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNI-VHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQT  213 (596)
T ss_pred             eccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcce-eccccchhhcccccccceeeeccccceeecccccccc
Confidence                    6666665 57779999999999999999999999 999999999999999999999999999876443221 


Q ss_pred             ----------------------ccccceeeeeee
Q psy6828         166 ----------------------TDQHSFLQHTYH  177 (392)
Q Consensus       166 ----------------------~d~~s~g~~~~~  177 (392)
                                            .|+||+|+++|-
T Consensus       214 ~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~  247 (596)
T KOG0586|consen  214 FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA  247 (596)
T ss_pred             cCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence                                  299999999998

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.81  E-value=4.4e-20  Score=178.95  Aligned_cols=129  Identities=26%  Similarity=0.417  Sum_probs=102.0

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------H-----------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------D-----------------   95 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~-----------------   95 (392)
                      ..+.||+|+||.||++.+..+++.||||.+....  ....+.+.+|+.+             +                 
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~   83 (372)
T cd07853           4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT   83 (372)
T ss_pred             ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence            3567999999999999999999999999987542  2334567777766             1                 


Q ss_pred             -Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          96 -IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        96 -~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                       ++..       ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......     
T Consensus        84 e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~  162 (372)
T cd07853          84 ELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI-LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMT  162 (372)
T ss_pred             eccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChHHEEECCCCCEEeccccceeecccCccccCC
Confidence             1110       12358999999999999999999999999 999999999999999999999999987432110     


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  197 (372)
T cd07853         163 QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE  197 (372)
T ss_pred             CCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence                                112489999999888

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.81  E-value=4.4e-20  Score=176.08  Aligned_cols=111  Identities=18%  Similarity=0.214  Sum_probs=90.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+.+...   .....+.+|..+                             
T Consensus         4 ~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~   83 (331)
T cd05624           4 EIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYY   83 (331)
T ss_pred             eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCC
Confidence            345679999999999999999999999999975322   223345556554                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        84 ~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i-iHrDlkp~Nill~~~~~~kl~DfG~a~~~  152 (331)
T cd05624          84 VGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY-VHRDIKPDNVLLDMNGHIRLADFGSCLKM  152 (331)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCchHHEEEcCCCCEEEEeccceeec
Confidence                  3333333468999999999999999999999999 99999999999999999999999998654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.81  E-value=2.9e-20  Score=178.92  Aligned_cols=111  Identities=29%  Similarity=0.473  Sum_probs=92.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhcC
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMENE  100 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~~  100 (392)
                      ..+.||+|+||.||++.+..+++.||||.+..... ...+.+.+|+.+                          +|+..+
T Consensus        78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  157 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG  157 (353)
T ss_pred             hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence            35689999999999999999999999999965433 344567788776                          343332


Q ss_pred             Cc----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         101 DV----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       101 ~~----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      .+    ..++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       158 ~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        158 SLEGTHIADEQFLADVARQILSGIAYLHRRHI-VHRDIKPSNLLINSAKNVKIADFGVSRILA  219 (353)
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEcccccceecc
Confidence            22    36778888999999999999999999 999999999999999999999999987653

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.81  E-value=2.3e-20  Score=177.06  Aligned_cols=126  Identities=19%  Similarity=0.245  Sum_probs=98.7

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||+||++.+..+++.||||.+++...   ...+.+.+|..+                           +++.. 
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            58999999999999999999999999975432   223344555444                           22211 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-----------  161 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-----------  161 (392)
                             ....+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....           
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI-IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence                   12268999999999999999999999999 99999999999999999999999988642110           


Q ss_pred             ------------ccccccccceeeeeee
Q psy6828         162 ------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------~~~~~d~~s~g~~~~~  177 (392)
                                  .....|+||+|+++|+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~  188 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYE  188 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHH
Confidence                        0123499999999998

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0589|consensus

Probab=99.81  E-value=1.5e-20  Score=178.68  Aligned_cols=131  Identities=20%  Similarity=0.283  Sum_probs=108.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------~~   96 (392)
                      |...+.+|+|+||.+++++++.+++.|++|.+.-...  ...+...+|..+                           +|
T Consensus         6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y   85 (426)
T KOG0589|consen    6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEY   85 (426)
T ss_pred             hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEee
Confidence            4557889999999999999999999999999976554  233456677766                           12


Q ss_pred             h----------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-cc-
Q psy6828          97 M----------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-YT-  164 (392)
Q Consensus        97 l----------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~-  164 (392)
                      .          +.+...|+++.+..|+.|++.|+.|||++.| +|||||+.||+++.++.+||+|||+|+...... .. 
T Consensus        86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i-LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~  164 (426)
T KOG0589|consen   86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV-LHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS  164 (426)
T ss_pred             cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence            1          2233469999999999999999999999999 999999999999999999999999999887654 11 


Q ss_pred             ---------------------cccccceeeeeee
Q psy6828         165 ---------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ---------------------~~d~~s~g~~~~~  177 (392)
                                           ..|+||+||++||
T Consensus       165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE  198 (426)
T KOG0589|consen  165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE  198 (426)
T ss_pred             eecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence                                 2399999999999

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=1.1e-19  Score=172.34  Aligned_cols=127  Identities=24%  Similarity=0.304  Sum_probs=99.5

Q ss_pred             CCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828          50 NPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME   98 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~   98 (392)
                      +.||+|+||.||++.+.   .+|+.||+|++.+...  .....+.+|+.+                          +++.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            46899999999998764   5789999999975432  223345566655                          2222


Q ss_pred             c--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          99 N--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        99 ~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                      .        ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......        
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            1        12258999999999999999999999999 999999999999999999999999987542220        


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~e  190 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFE  190 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeee
Confidence                           123499999999999

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.81  E-value=6.5e-20  Score=174.30  Aligned_cols=106  Identities=26%  Similarity=0.314  Sum_probs=85.6

Q ss_pred             CCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH----------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI----------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~----------------------------   94 (392)
                      +.||+|+||.||++.+.   .+++.||+|.+.+...    .....+.+|+.+                            
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            46899999999999864   4688999999975322    223445667665                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        82 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          82 LSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGI-IYRDLKPENILLDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             CCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence                   22222 2257888999999999999999999999 9999999999999999999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG1006|consensus

Probab=99.81  E-value=9.3e-21  Score=165.92  Aligned_cols=137  Identities=18%  Similarity=0.275  Sum_probs=104.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HHhh-
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DIME-   98 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~l~-   98 (392)
                      ....+|.|+||+|++-.++.+|+..|||.++.... ...++++.|...                           ++|. 
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~  147 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI  147 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence            35789999999999999999999999999987665 445667777665                           1110 


Q ss_pred             -----------cCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          99 -----------NEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        99 -----------~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                                 -.+..++|.-+-.|..-.+.||.||-+ ..+ ||||+||+|||++..|.+||||||++..+.++.    
T Consensus       148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lki-IHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~  226 (361)
T KOG1006|consen  148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKI-IHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV  226 (361)
T ss_pred             hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhh-hhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence                       112246777667777777899999996 456 999999999999999999999999987543211    


Q ss_pred             --------------------cccccccceeeeeee--ccCCCCcc
Q psy6828         163 --------------------YTGTDQHSFLQHTYH--VNRAGSTE  185 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~--~~~~~~~~  185 (392)
                                          ...+|+||+|+++||  +..|++.+
T Consensus       227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~  271 (361)
T KOG1006|consen  227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK  271 (361)
T ss_pred             ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence                                112499999999999  45577655

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.81  E-value=6.5e-20  Score=173.79  Aligned_cols=107  Identities=22%  Similarity=0.320  Sum_probs=85.3

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN-   99 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~-   99 (392)
                      .||+|+||+||++.+..+++.||+|.+++...   ...+....|..+                           +++.. 
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            58999999999999999999999999975421   122233333332                           22211 


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~a~~~  146 (316)
T cd05592          82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI-IYRDLKLDNVLLDKDGHIKIADFGMCKEN  146 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-EeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence                   12268999999999999999999999999 99999999999999999999999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.81  E-value=3.6e-20  Score=174.82  Aligned_cols=112  Identities=24%  Similarity=0.364  Sum_probs=91.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.++.... .....+.+|+.+                              
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   87 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD   87 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence            5566789999999999999999999999999875432 222345566665                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872          88 KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECccccceec
Confidence                2333333358899999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0032|consensus

Probab=99.81  E-value=5.4e-20  Score=176.54  Aligned_cols=116  Identities=24%  Similarity=0.360  Sum_probs=99.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~------------------------   94 (392)
                      ....|...+.||+|.||.||+|.++.+|+.+|+|.+.+....   ..+.+.+|+.+                        
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            455677789999999999999999999999999999887663   34578888888                        


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----ceEEEeccccchhc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----WVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~DFGla~~~  158 (392)
                                  +.+...  .+++..+..+++|++.++.|||+.|+ +||||||+|+|+...    +.+|++|||++...
T Consensus       113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gv-vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGV-VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCc-eeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence                        111112  29999999999999999999999999 999999999999644    47999999999987


Q ss_pred             cc
Q psy6828         159 RD  160 (392)
Q Consensus       159 ~~  160 (392)
                      ..
T Consensus       190 ~~  191 (382)
T KOG0032|consen  190 KP  191 (382)
T ss_pred             cC
Confidence            76

>PTZ00284 protein kinase; Provisional

Probab=99.81  E-value=4.6e-20  Score=184.11  Aligned_cols=132  Identities=19%  Similarity=0.194  Sum_probs=97.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||++.+..+++.||||+++.... .......|+.+                            
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            3456677889999999999999999999999999964321 11122222222                            


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCc---------------
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRW---------------  145 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~---------------  145 (392)
                                   +++... ..+++..+..++.||+.||.|||+ .++ +||||||+|||++.++               
T Consensus       207 ~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gI-iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        207 MCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHL-MHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             EEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCe-ecCCCCHHHEEEecCCcccccccccccCCCC
Confidence                         112111 258999999999999999999998 599 9999999999998765               


Q ss_pred             -eEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828         146 -VVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       146 -~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                       .+||+|||++.......                    ....|+||+|+++|+
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e  337 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE  337 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence             49999999875422111                    112388888888888

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=3.4e-20  Score=178.74  Aligned_cols=113  Identities=16%  Similarity=0.155  Sum_probs=90.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HH
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DI   96 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~   96 (392)
                      .|...+.||+|+||.||+|.+..+++.||+|...+........+.+.+..                            ++
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~  146 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTY  146 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcHHHH
Confidence            36667889999999999999999999999998755432211111111111                            44


Q ss_pred             hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          97 MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        97 l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +.+....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       147 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        147 LTKRSRPLPIDQALIIEKQILEGLRYLHAQRI-IHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            44445579999999999999999999999999 99999999999999999999999998753

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.81  E-value=5.6e-20  Score=171.42  Aligned_cols=113  Identities=25%  Similarity=0.353  Sum_probs=87.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||+||++.+..+++.||+|.++....  .....+.+|+.+                             
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            3445679999999999999999999999999865321  111112223222                             


Q ss_pred             -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                   +++.. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        82 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          82 VTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI-VHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             EEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccCcccccc
Confidence                         12221 11248999999999999999999999999 999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0607|consensus

Probab=99.81  E-value=4e-20  Score=165.75  Aligned_cols=110  Identities=25%  Similarity=0.368  Sum_probs=93.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------HHhhc-------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------DIMEN-------------   99 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------~~l~~-------------   99 (392)
                      ++...||+|+|+.|--|....+|..||||++.+..-....++.+|+++              ++++.             
T Consensus        81 Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G  160 (463)
T KOG0607|consen   81 LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG  160 (463)
T ss_pred             hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence            347789999999999999999999999999999877888899999988              22111             


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchh
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEF  157 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~  157 (392)
                              ....|++.++..++++|+.||.|||.+|| .||||||+|||-.+..   -+|||||.+..-
T Consensus       161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgI-AHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGI-AHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCc-ccccCCccceeecCCCCcCceeeeccccccc
Confidence                    11159999999999999999999999999 9999999999986543   489999987643

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.80  E-value=6.8e-20  Score=173.65  Aligned_cols=106  Identities=25%  Similarity=0.316  Sum_probs=84.9

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhcC
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMENE  100 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~~  100 (392)
                      .||+|+||+||++.+..+++.||||.+++...   ...+....|..+                           +|+..+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            58999999999999999999999999975421   122233334333                           222211


Q ss_pred             --------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         101 --------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       101 --------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05619          82 DLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI-VYRDLKLDNILLDTDGHIKIADFGMCKE  145 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEccCCcceE
Confidence                    1258899999999999999999999999 9999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.80  E-value=7e-20  Score=175.10  Aligned_cols=54  Identities=31%  Similarity=0.400  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDiKp~Nil~~~~~~~kl~DfG~a~~~  224 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI  224 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCE-ECCCCccceEEEcCCCcEEEeeccccccc
Confidence            6778889999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=8.6e-20  Score=177.87  Aligned_cols=106  Identities=21%  Similarity=0.198  Sum_probs=89.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.....      .+.+|+.+                             
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~------~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRG------GTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhh------hhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            3466678899999999999999999999999976432      24456555                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                           +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus       166 ~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~I-vHrDiKP~NIll~~~~~vkL~DFG~a~~  231 (391)
T PHA03212        166 KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRI-IHRDIKAENIFINHPGDVCLGDFGAACF  231 (391)
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHhEEEcCCCCEEEEeCCcccc
Confidence                 222222 258899999999999999999999999 9999999999999999999999999865

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.80  E-value=1e-19  Score=173.65  Aligned_cols=111  Identities=23%  Similarity=0.381  Sum_probs=90.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||||.+....  ......+.+|+.+                             
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            344567999999999999999999999999986432  2333456777766                             


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        82 v~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          82 VFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANV-FHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEccCcccccc
Confidence                      11111 1258999999999999999999999999 99999999999999999999999998753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.80  E-value=9.4e-20  Score=170.88  Aligned_cols=114  Identities=14%  Similarity=0.216  Sum_probs=83.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCChhH-HH-HH------HHHHHH-----------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSVDI-TR-AM------KKELKI-----------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~~-~~-~~------~~E~~~-----------------   94 (392)
                      +..|...+.||+|+||.||+|.+..+   +..+|+|......... .+ ..      ..++..                 
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            45567778899999999999998777   6678888654322110 00 00      000000                 


Q ss_pred             ------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828          95 ------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus        95 ------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~  150 (392)
                                              +++... ...++..+..++.|++.||.|||++++ +||||||+|||++.++.++|+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-iHrDiKp~Nill~~~~~~~l~  168 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGI-SHGDIKPENIMVDGNNRGYII  168 (294)
T ss_pred             eeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCcEEEE
Confidence                                    111111 136778889999999999999999999 999999999999999999999


Q ss_pred             ccccchhc
Q psy6828         151 DFGLTEFK  158 (392)
Q Consensus       151 DFGla~~~  158 (392)
                      |||+|+..
T Consensus       169 DFGla~~~  176 (294)
T PHA02882        169 DYGIASHF  176 (294)
T ss_pred             EcCCceee
Confidence            99998754

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.80  E-value=2.5e-19  Score=169.64  Aligned_cols=113  Identities=22%  Similarity=0.362  Sum_probs=92.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcE----EEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRI----FAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.    ||+|.++... ....+.+.+|+.+                          
T Consensus         9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e   88 (316)
T cd05108           9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   88 (316)
T ss_pred             ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeee
Confidence            45567899999999999997766654    8999997543 2344567777666                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-iH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             cCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe-eccccchhheEecCCCcEEEcccccccccc
Confidence                    3333333458888999999999999999999999 999999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0574|consensus

Probab=99.80  E-value=1.3e-20  Score=167.58  Aligned_cols=131  Identities=29%  Similarity=0.395  Sum_probs=109.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .+.....||+|+||.||++.++.+|+.+|||.++..  ..++++.+|+.+                              
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            344567899999999999999999999999999755  345667888887                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY------  163 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------  163 (392)
                           ++++-.+..|++.++..+++.-+.||+|||...- ||||||..||||+.+|..||+|||.+..+++...      
T Consensus       112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~K-IHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI  190 (502)
T KOG0574|consen  112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK-IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI  190 (502)
T ss_pred             CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHH-HHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence                 5555566689999999999999999999999888 9999999999999999999999999986654221      


Q ss_pred             -----------------ccccccceeeeeeec
Q psy6828         164 -----------------TGTDQHSFLQHTYHV  178 (392)
Q Consensus       164 -----------------~~~d~~s~g~~~~~~  178 (392)
                                       +..|+||+|++..|.
T Consensus       191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM  222 (502)
T KOG0574|consen  191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEM  222 (502)
T ss_pred             cCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence                             123888888887773

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.80  E-value=7.1e-19  Score=161.91  Aligned_cols=129  Identities=20%  Similarity=0.334  Sum_probs=103.2

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+.+|+|+||.||++....+++.||+|.+..... ....+.+|+..                                
T Consensus         9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (263)
T cd05052           9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG   87 (263)
T ss_pred             EEeeecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCC
Confidence            345679999999999999999999999999876543 33456677665                                


Q ss_pred             ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||++.......        
T Consensus        88 ~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~  166 (263)
T cd05052          88 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK  166 (263)
T ss_pred             cHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCC
Confidence               33322 22358899999999999999999999999 999999999999999999999999987643221        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||||+++|+
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e  197 (263)
T cd05052         167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  197 (263)
T ss_pred             CccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence                            112488888888888

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=1.3e-19  Score=175.53  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=92.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+.+...   .....+.+|..+                          
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            446667889999999999999999999999999865322   223345566655                          


Q ss_pred             HHhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 DIMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ~~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +++..+       ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       123 Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         123 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             cCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCE-EeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence            222211       1258889999999999999999999999 999999999999999999999999987653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0690|consensus

Probab=99.79  E-value=3.4e-20  Score=166.57  Aligned_cols=128  Identities=19%  Similarity=0.203  Sum_probs=98.6

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHH---HHHHHHH--------------------------HHhhc
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA---MKKELKI--------------------------DIMEN   99 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~---~~~E~~~--------------------------~~l~~   99 (392)
                      .+.||+|.||+|.+|+.+.+++.||||++++.-+-..+.   -..|...                          +|...
T Consensus       173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG  252 (516)
T KOG0690|consen  173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG  252 (516)
T ss_pred             HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence            456999999999999999999999999998764422111   1122222                          22111


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-c------
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-T------  164 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~------  164 (392)
                              ....+++...+.+-.+|++||.|||+++| +.||||.+|+|+|.+|++||+|||+|+.--.... +      
T Consensus       253 GeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~i-vYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGT  331 (516)
T KOG0690|consen  253 GELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNI-VYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGT  331 (516)
T ss_pred             ceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCe-eeeechhhhheeccCCceEeeecccchhcccccceeccccCC
Confidence                    22258999999999999999999999999 9999999999999999999999999985322111 1      


Q ss_pred             ----------------cccccceeeeeee
Q psy6828         165 ----------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ----------------~~d~~s~g~~~~~  177 (392)
                                      ..|.|.+|+++||
T Consensus       332 PEYLAPEVleDnDYgraVDWWG~GVVMYE  360 (516)
T KOG0690|consen  332 PEYLAPEVLEDNDYGRAVDWWGVGVVMYE  360 (516)
T ss_pred             hhhcCchhhccccccceeehhhhhHHHHH
Confidence                            1288888888888

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.6e-19  Score=168.49  Aligned_cols=110  Identities=20%  Similarity=0.228  Sum_probs=90.0

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HH--
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DI--   96 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~--   96 (392)
                      ..+.||+|+||.||++.+..+++.||+|.+......   ....+.+|+.+                          ++  
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05605           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN   83 (285)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC
Confidence            345689999999999999999999999999754332   22345667665                          22  


Q ss_pred             -------hhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          97 -------MEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        97 -------l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.++|+|||++...
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05605          84 GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI-VYRDLKPENILLDDYGHIRISDLGLAVEI  152 (285)
T ss_pred             CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc-EecCCCHHHEEECCCCCEEEeeCCCceec
Confidence                   211 22358999999999999999999999999 99999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.79  E-value=1.9e-19  Score=167.31  Aligned_cols=106  Identities=22%  Similarity=0.274  Sum_probs=86.0

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HHhh----
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DIME----   98 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~l~----   98 (392)
                      ||+|+||.||++.+..+|+.||+|.+.+....   .......|+++                          +++.    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999999999999999999754321   22334456555                          2221    


Q ss_pred             ------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          99 ------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        99 ------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            .....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dikp~Nili~~~~~~~l~Dfg~~~~~  145 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI-VYRDMKPENVLLDDQGNCRLSDLGLAVEL  145 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE-EEccCChHhEEEcCCCCEEEeeceeeeec
Confidence                  122358888999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0668|consensus

Probab=99.79  E-value=3.3e-20  Score=159.27  Aligned_cols=129  Identities=23%  Similarity=0.339  Sum_probs=104.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------H
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------D   95 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------~   95 (392)
                      -|-..+.+|+|.|++||.|.+..++++++||+++.-.   .+.+.+|+.|                             +
T Consensus        39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             hHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            3555788999999999999999999999999996443   4668888888                             3


Q ss_pred             HhhcCCc-----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhccccccc-----
Q psy6828          96 IMENEDV-----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEYT-----  164 (392)
Q Consensus        96 ~l~~~~~-----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~~-----  164 (392)
                      ++++.+.     .|+...++.++.|++.||.||||.|| +|||+||.|++++.. -.++|+|||+|.+.......     
T Consensus       116 ~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GI-mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVA  194 (338)
T KOG0668|consen  116 YVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGI-MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA  194 (338)
T ss_pred             hhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCc-ccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeee
Confidence            3333222     47888899999999999999999999 999999999999876 56999999999987654432     


Q ss_pred             ------------------cccccceeeeeee
Q psy6828         165 ------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ------------------~~d~~s~g~~~~~  177 (392)
                                        +.|+|||||.+-.
T Consensus       195 SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~  225 (338)
T KOG0668|consen  195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  225 (338)
T ss_pred             hhhcCCchheeechhccccHHHHHHHHHHHH
Confidence                              1288888887654

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.79  E-value=2.3e-19  Score=167.47  Aligned_cols=109  Identities=20%  Similarity=0.187  Sum_probs=89.6

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------------   94 (392)
                      .+.||+|+||+||++.+..+++.||+|.+.+...   ...+.+.+|+.+                               
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence            4569999999999999999999999999976533   223345667666                               


Q ss_pred             ----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++. .....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||++...
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-iH~dikp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632          85 GDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT-VYRDLKPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             ccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCCHHHEEECCCCCEEEecCCcceec
Confidence                1222 122358999999999999999999999999 99999999999999999999999988653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.79  E-value=5.8e-19  Score=162.57  Aligned_cols=131  Identities=23%  Similarity=0.249  Sum_probs=101.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+ ..||+|.+++... ..+.+.+|+.+                             
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            3466677899999999999986544 5699999976443 23456777766                             


Q ss_pred             -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                           +++.. ....+++..+..++.|++.||.|+|+.++ +||||||+||++++++.+||+|||+++......      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~  162 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  162 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence                 33322 12247889999999999999999999999 999999999999999999999999987542211      


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ...+|+||+|+++|+
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e  195 (262)
T cd05071         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  195 (262)
T ss_pred             CcccceecCHhHhccCCCCchhhHHHHHHHHHH
Confidence                              112488888888887

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.79  E-value=1.4e-19  Score=183.28  Aligned_cols=113  Identities=14%  Similarity=0.257  Sum_probs=80.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeec----CcEEEEEEcCCCChh---HHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYK----GRIFAIKRIPKKSVD---ITRAMKKELK------------------------   93 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~----~~~vAiK~~~~~~~~---~~~~~~~E~~------------------------   93 (392)
                      .|...+.||+|+||.||+|.+..+    +..||+|++......   ..+.+.+...                        
T Consensus       133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L  212 (566)
T PLN03225        133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDEYWL  212 (566)
T ss_pred             CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCceEE
Confidence            456678899999999999999888    899999998643221   1111111000                        


Q ss_pred             ----------HHHhhcCCc-------------------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-
Q psy6828          94 ----------IDIMENEDV-------------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-  143 (392)
Q Consensus        94 ----------~~~l~~~~~-------------------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-  143 (392)
                                .+++.....                   ...+..+..++.|++.||.|||++++ +||||||+|||++. 
T Consensus       213 V~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI-iHRDLKP~NILl~~~  291 (566)
T PLN03225        213 VWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI-VHRDVKPQNIIFSEG  291 (566)
T ss_pred             EEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE-EeCcCCHHHEEEeCC
Confidence                      012211110                   11233466899999999999999999 99999999999986 


Q ss_pred             CceEEEeccccchhc
Q psy6828         144 RWVVKLADFGLTEFK  158 (392)
Q Consensus       144 ~~~~kl~DFGla~~~  158 (392)
                      ++.+||+|||+|+..
T Consensus       292 ~~~~KL~DFGlA~~l  306 (566)
T PLN03225        292 SGSFKIIDLGAAADL  306 (566)
T ss_pred             CCcEEEEeCCCcccc
Confidence            589999999999743

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.7e-19  Score=178.47  Aligned_cols=108  Identities=18%  Similarity=0.171  Sum_probs=89.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||||......      +.+|+.+                              
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~------~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYAS------SVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccC------HHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            4666788999999999999999999999999654322      2344444                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                          +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI-vHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        244 SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI-IHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-EECcCCHHHEEECCCCCEEEcccCCceecc
Confidence                3333333369999999999999999999999999 999999999999999999999999987653

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.79  E-value=1.9e-19  Score=174.28  Aligned_cols=114  Identities=17%  Similarity=0.165  Sum_probs=91.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------H
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------D   95 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~   95 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+++...   .....+.+|+.+                          +
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05596          44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVME  123 (370)
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEc
Confidence            35556789999999999999999999999999965322   223345566665                          2


Q ss_pred             HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      |+..+       +..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus       124 y~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         124 YMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             CCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            22221       1258889999999999999999999999 999999999999999999999999987543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.79  E-value=3.2e-19  Score=166.03  Aligned_cols=113  Identities=24%  Similarity=0.347  Sum_probs=94.4

Q ss_pred             eeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.+|+|+||.||++.    +..+++.||+|.+........+.+.+|+.+                           
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   85 (284)
T cd05081           6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV   85 (284)
T ss_pred             ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence            3445679999999999997    345788999999987766666778888776                           


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...
T Consensus        86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY-VHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCHhhEEECCCCeEEECCCccccccc
Confidence                      3333333358899999999999999999999999 999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0612|consensus

Probab=99.79  E-value=5.5e-20  Score=187.79  Aligned_cols=112  Identities=22%  Similarity=0.227  Sum_probs=94.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      |.....||+|+||.|.+++++.+++.||+|++++..+   ..+..|..|..+                          +|
T Consensus        77 feilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY  156 (1317)
T KOG0612|consen   77 FEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDY  156 (1317)
T ss_pred             hHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEec
Confidence            3446779999999999999999999999999988543   334556666665                          33


Q ss_pred             hh---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          97 ME---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        97 l~---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +-         +.+ .+++..+++|+.+|+.||.-||+.|+ |||||||+|||||..|++||+|||.|-.+.
T Consensus       157 ~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgy-VHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  157 MPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGY-VHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             ccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccc-eeccCCcceeEecccCcEeeccchhHHhcC
Confidence            33         333 69999999999999999999999999 999999999999999999999999987654

>KOG1152|consensus

Probab=99.79  E-value=2.7e-19  Score=171.35  Aligned_cols=115  Identities=24%  Similarity=0.362  Sum_probs=96.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH--------HHHHHHHHHH-----------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI--------TRAMKKELKI-----------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~-----------------------   94 (392)
                      |.+..++|+|+||.|++|.++.+...|+||.+.|..+-.        +-.+..|++|                       
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd  642 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD  642 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence            677889999999999999999999999999998765411        0113334444                       


Q ss_pred             ----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                      ++++.+. .++|.++..|++|++.|+++||+.+| +|||||-+|+.++.+|-+||+|||.+...
T Consensus       643 ~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~i-vhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  643 YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQGI-VHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccCc-eecccccccEEEecCCeEEEeeccchhhh
Confidence                            5555554 69999999999999999999999999 99999999999999999999999998876


Q ss_pred             cccc
Q psy6828         159 RDAE  162 (392)
Q Consensus       159 ~~~~  162 (392)
                      .+..
T Consensus       721 ksgp  724 (772)
T KOG1152|consen  721 KSGP  724 (772)
T ss_pred             cCCC
Confidence            5543

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.79  E-value=1.1e-18  Score=160.23  Aligned_cols=107  Identities=21%  Similarity=0.292  Sum_probs=88.2

Q ss_pred             CCCCcceeEEEEEEEe--ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||.||+|...  .++..||+|.+..... ...+.+.+|+.+                                 
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999765  3456799999976533 334567777766                                 


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~  145 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF-VHRDLAARNVLLVNQHYAKISDFGLSKAL  145 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe-eecccchheEEEcCCCcEEeccCCccccc
Confidence             3444334468999999999999999999999999 99999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0582|consensus

Probab=99.79  E-value=4.3e-19  Score=165.60  Aligned_cols=112  Identities=28%  Similarity=0.356  Sum_probs=94.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |.....+|.|.-++||+|+..-+++.||||+++-..- ...+.+++|+..                              
T Consensus        28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa  107 (516)
T KOG0582|consen   28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMA  107 (516)
T ss_pred             eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhc
Confidence            5556779999999999999999999999999975443 335788888887                              


Q ss_pred             -----HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           ++++.. ...++|..+..++++++.||.|||++|. ||||+|+.||||+.+|.+||+|||.+..+
T Consensus       108 ~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~-IHRdvKAgnILi~~dG~VkLadFgvsa~l  176 (516)
T KOG0582|consen  108 GGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGH-IHRDVKAGNILIDSDGTVKLADFGVSASL  176 (516)
T ss_pred             CCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCc-eecccccccEEEcCCCcEEEcCceeeeee
Confidence                 222210 1139999999999999999999999999 99999999999999999999999987654

>KOG0196|consensus

Probab=99.79  E-value=3.1e-19  Score=176.15  Aligned_cols=136  Identities=24%  Similarity=0.315  Sum_probs=114.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HH
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~   96 (392)
                      ...+.||.|.||+|++|+.+..|+   .||||.++.... .+...|+.|..|                          +|
T Consensus       632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy  711 (996)
T KOG0196|consen  632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY  711 (996)
T ss_pred             EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence            346679999999999999887774   699999987654 456679999998                          44


Q ss_pred             h---------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828          97 M---------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        97 l---------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~---  164 (392)
                      |         +..+++|+..+..-+++.|+.|++||-+.+. +||||...|||++.+-.+|++|||+++++.++...   
T Consensus       712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~Y-VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt  790 (996)
T KOG0196|consen  712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT  790 (996)
T ss_pred             hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCc-hhhhhhhhheeeccceEEEeccccceeecccCCCcccc
Confidence            4         4456689999999999999999999999999 99999999999999999999999999987654411   


Q ss_pred             -----------------------cccccceeeeeeeccCCCC
Q psy6828         165 -----------------------GTDQHSFLQHTYHVNRAGS  183 (392)
Q Consensus       165 -----------------------~~d~~s~g~~~~~~~~~~~  183 (392)
                                             .+|+||||+++||..-|++
T Consensus       791 t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE  832 (996)
T KOG0196|consen  791 TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  832 (996)
T ss_pred             ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence                                   1299999999999444443

>KOG1026|consensus

Probab=99.79  E-value=1.6e-19  Score=180.79  Aligned_cols=172  Identities=22%  Similarity=0.371  Sum_probs=129.6

Q ss_pred             cCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------HH
Q psy6828          49 SNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------~~   96 (392)
                      .+.||+|+||+||+|....     +.+.||||.++...-. ....|++|++.                          +|
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY  570 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY  570 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence            7789999999999997543     2357999999876654 77889999998                          33


Q ss_pred             hhcCCc----------------------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          97 MENEDV----------------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        97 l~~~~~----------------------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                      +..+++                      .|+..+.+.|+.||+.|+.||-++.. +||||-..|+|+.++..+||+|||+
T Consensus       571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~F-VHRDLATRNCLVge~l~VKIsDfGL  649 (774)
T KOG1026|consen  571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHF-VHRDLATRNCLVGENLVVKISDFGL  649 (774)
T ss_pred             cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcc-cccchhhhhceeccceEEEeccccc
Confidence            332211                      38999999999999999999999999 9999999999999999999999999


Q ss_pred             chhccccc-------------------------cccccccceeeeeeec---cCCCCcccccccccchhhhccCCHHHHH
Q psy6828         155 TEFKRDAE-------------------------YTGTDQHSFLQHTYHV---NRAGSTESLHCKCDEALLFEMLPRSVAE  206 (392)
Q Consensus       155 a~~~~~~~-------------------------~~~~d~~s~g~~~~~~---~~~~~~~~~d~~~~~~lL~~~lp~~v~~  206 (392)
                      ++..=+..                         .+.+||||||+++||.   ...|+.+             +-..++.+
T Consensus       650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g-------------lSn~EVIe  716 (774)
T KOG1026|consen  650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG-------------LSNQEVIE  716 (774)
T ss_pred             chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc-------------cchHHHHH
Confidence            98542222                         2344999999999992   2233322             44567777


Q ss_pred             HhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHH
Q psy6828         207 QLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTC  254 (392)
Q Consensus       207 ~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~  254 (392)
                      .++++..+..+                    +..|.++.+++-+++++
T Consensus       717 ~i~~g~lL~~P--------------------e~CP~~vY~LM~~CW~~  744 (774)
T KOG1026|consen  717 CIRAGQLLSCP--------------------ENCPTEVYSLMLECWNE  744 (774)
T ss_pred             HHHcCCcccCC--------------------CCCCHHHHHHHHHHhhc
Confidence            77777544322                    23567777777666643

>KOG4279|consensus

Probab=99.78  E-value=5e-19  Score=172.58  Aligned_cols=126  Identities=23%  Similarity=0.369  Sum_probs=103.3

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------------H
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------------D   95 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------------~   95 (392)
                      .||+|+||+||-|++..+....|||.++.+.-+..+.+..|+..                                   +
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            58999999999999999999999999987655544555555554                                   5


Q ss_pred             HhhcCCcCC--CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEeccccchhccccc-----cc---
Q psy6828          96 IMENEDVKL--DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADFGLTEFKRDAE-----YT---  164 (392)
Q Consensus        96 ~l~~~~~~l--~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DFGla~~~~~~~-----~~---  164 (392)
                      +++...+++  ++..+-.+.+||++||.|||++.| +|||||-+|+|++ -.|.+||+|||.++.+..-.     .+   
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~I-VHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKI-VHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcce-eeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence            556555566  888899999999999999999999 9999999999996 56999999999998653211     11   


Q ss_pred             -----------------cccccceeeeeee
Q psy6828         165 -----------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -----------------~~d~~s~g~~~~~  177 (392)
                                       ..|+|||||+..|
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vE  770 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVE  770 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEe
Confidence                             1299999999998

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.78  E-value=1.9e-18  Score=158.72  Aligned_cols=108  Identities=22%  Similarity=0.325  Sum_probs=86.0

Q ss_pred             CCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------------   94 (392)
                      +.||+|+||.||+|.+...   ...||+|.+.... ....+.+.+|+.+                               
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            3589999999999986543   4579999986432 3445667777665                               


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++..+..++.|++.||.|||+.++ +||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlk~~nili~~~~~~kl~dfg~~~~~  148 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF-VHRDLAARNCMLDESFTVKVADFGLARDI  148 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccCcceEEEcCCCcEEECCccccccc
Confidence                 3333333346778888999999999999999999 99999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0666|consensus

Probab=99.78  E-value=1.8e-19  Score=161.10  Aligned_cols=116  Identities=25%  Similarity=0.346  Sum_probs=87.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCCh------hHH--HHHHHHHHH-------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSV------DIT--RAMKKELKI-------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~------~~~--~~~~~E~~~-------------------   94 (392)
                      |.....+|+|+||.||++....++    +.||||+++..+.      ...  -.+.+|+..                   
T Consensus        26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l  105 (438)
T KOG0666|consen   26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWL  105 (438)
T ss_pred             hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEE
Confidence            445677999999999999766543    3799999976622      111  123444433                   


Q ss_pred             ----------HHhhc----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----ceEEEeccccch
Q psy6828          95 ----------DIMEN----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----WVVKLADFGLTE  156 (392)
Q Consensus        95 ----------~~l~~----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~DFGla~  156 (392)
                                ++++.    ....++...+..++.||+.|+.|||++-+ +||||||.|||+..+    |.+||+|||+++
T Consensus       106 ~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWv-lHRDLKPaNIlvmgdgperG~VKIaDlGlaR  184 (438)
T KOG0666|consen  106 LFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWV-LHRDLKPANILVMGDGPERGRVKIADLGLAR  184 (438)
T ss_pred             EehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhe-eeccCCcceEEEeccCCccCeeEeecccHHH
Confidence                      11111    22368999999999999999999999888 999999999999877    899999999999


Q ss_pred             hccccc
Q psy6828         157 FKRDAE  162 (392)
Q Consensus       157 ~~~~~~  162 (392)
                      .+.+..
T Consensus       185 ~~~~pl  190 (438)
T KOG0666|consen  185 LFNNPL  190 (438)
T ss_pred             Hhhccc
Confidence            876543

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.78  E-value=3.3e-19  Score=167.56  Aligned_cols=113  Identities=21%  Similarity=0.358  Sum_probs=92.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+                             
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~   86 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL   86 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence            35667789999999999999999999999999865432 222345556655                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        87 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  154 (301)
T cd07873          87 DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAK  154 (301)
T ss_pred             ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence                 2233333468899999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.78  E-value=9.6e-19  Score=162.48  Aligned_cols=112  Identities=24%  Similarity=0.347  Sum_probs=91.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.||+|+||+||+|.+..+++    .||+|.+..... ...+.+.+|..+                          
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~   88 (279)
T cd05109           9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQ   88 (279)
T ss_pred             eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEE
Confidence            3446779999999999999877776    489999875433 334556667655                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              +++......+++..+..++.|++.||.|||++++ +||||||+|||+++++.+||+|||+++..
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-iH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL-VHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccccceEEEcCCCcEEECCCCceeec
Confidence                    3333334468999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.78  E-value=7.2e-19  Score=165.50  Aligned_cols=113  Identities=24%  Similarity=0.353  Sum_probs=88.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEee----------------cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY----------------KGRIFAIKRIPKKSV-DITRAMKKELKI-------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------   94 (392)
                      .|...+.||+|+||.||+|.+..                ++..||+|.+..... .....+.+|+.+             
T Consensus         6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~   85 (304)
T cd05096           6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL   85 (304)
T ss_pred             hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence            45556789999999999997532                344799999976532 345567888776             


Q ss_pred             -------------HHhhcCC---------------------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCC
Q psy6828          95 -------------DIMENED---------------------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNL  134 (392)
Q Consensus        95 -------------~~l~~~~---------------------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl  134 (392)
                                   +++..+.                           ..+++..+..++.|++.||.|||++++ +||||
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-vH~dl  164 (304)
T cd05096          86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF-VHRDL  164 (304)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc-cccCc
Confidence                         2221111                           135777889999999999999999999 99999


Q ss_pred             CCCceEEcCCceEEEeccccchhc
Q psy6828         135 KASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       135 Kp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      ||+|||++.++.+||+|||+++..
T Consensus       165 kp~Nill~~~~~~kl~DfG~~~~~  188 (304)
T cd05096         165 ATRNCLVGENLTIKIADFGMSRNL  188 (304)
T ss_pred             chhheEEcCCccEEECCCccceec
Confidence            999999999999999999998754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.78  E-value=4.6e-19  Score=165.41  Aligned_cols=109  Identities=18%  Similarity=0.204  Sum_probs=89.7

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------------   94 (392)
                      .+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                               
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g   84 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence            4568999999999999999999999999875432   223445667766                               


Q ss_pred             ----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++. .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++...
T Consensus        85 ~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-iH~dikp~Nil~~~~~~~~l~Dfg~~~~~  152 (285)
T cd05630          85 GDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI-VYRDLKPENILLDDHGHIRISDLGLAVHV  152 (285)
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeccceeec
Confidence                2221 122358999999999999999999999999 99999999999999999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.78  E-value=1.4e-18  Score=168.62  Aligned_cols=139  Identities=18%  Similarity=0.229  Sum_probs=102.4

Q ss_pred             ceeeeccccceeeeeeccccccc----cceeeeccCCCCCcceeEEEEEEE-----eecCcEEEEEEcCCCC-hhHHHHH
Q psy6828          19 TVVKLVDNHKLFDWFCSWFQNVH----TSQVSLSSNPDSDFRYSAIFTPIG-----IYKGRIFAIKRIPKKS-VDITRAM   88 (392)
Q Consensus        19 ~~l~~l~hpniv~~~~~~~~~~~----~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~-~~~~~~~   88 (392)
                      +++..++-.|-+.+.........    ....+...+.||+|+||.||+|..     ..++..||+|+++... ....+.+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~   85 (375)
T cd05104           6 KVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREAL   85 (375)
T ss_pred             eeeeeecCceEEEecCCCCCCccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHH
Confidence            45667777777755444332221    123466689999999999999974     2456789999997543 2334556


Q ss_pred             HHHHHH---------------------------HHh---------hc---------------------------------
Q psy6828          89 KKELKI---------------------------DIM---------EN---------------------------------   99 (392)
Q Consensus        89 ~~E~~~---------------------------~~l---------~~---------------------------------   99 (392)
                      .+|+.+                           +|+         ..                                 
T Consensus        86 ~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (375)
T cd05104          86 MSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSL  165 (375)
T ss_pred             HHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhh
Confidence            677665                           111         10                                 


Q ss_pred             -----------------------------------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCc
Q psy6828         100 -----------------------------------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASN  138 (392)
Q Consensus       100 -----------------------------------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~N  138 (392)
                                                               ....+++..+..++.||+.||.|||++++ +||||||+|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~N  244 (375)
T cd05104         166 NEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNC-IHRDLAARN  244 (375)
T ss_pred             hhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCchhh
Confidence                                                     01247888899999999999999999999 999999999


Q ss_pred             eEEcCCceEEEeccccchhc
Q psy6828         139 CLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       139 Ill~~~~~~kl~DFGla~~~  158 (392)
                      ||++.++.+||+|||+++..
T Consensus       245 ill~~~~~~kl~DfG~a~~~  264 (375)
T cd05104         245 ILLTHGRITKICDFGLARDI  264 (375)
T ss_pred             EEEECCCcEEEecCccceec
Confidence            99999999999999998754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.78  E-value=1e-18  Score=165.47  Aligned_cols=150  Identities=23%  Similarity=0.319  Sum_probs=103.9

Q ss_pred             cCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...||+|+||+||+|.++  .+++.||+|.+......  ..+.+|+.+                                
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc--HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            568999999999999865  36789999999765332  234556555                                


Q ss_pred             ----HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchhc
Q psy6828          95 ----DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~~  158 (392)
                          +++..        ....+++..+..++.|++.||.|||++++ +||||||+|||+    +.++.+||+|||+++..
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i-vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE-EcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence                11110        11248889999999999999999999999 999999999999    45578999999999865


Q ss_pred             ccccccccc-ccceeeeeeeccCC-----CCcccccccccchhhhccCC
Q psy6828         159 RDAEYTGTD-QHSFLQHTYHVNRA-----GSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       159 ~~~~~~~~d-~~s~g~~~~~~~~~-----~~~~~~d~~~~~~lL~~~lp  201 (392)
                      ........+ ....|...|.+||.     .++...|+|+.+.++..++.
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~  211 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT  211 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence            433211111 12234555555551     23345666666666665543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.78  E-value=2.3e-19  Score=164.39  Aligned_cols=109  Identities=25%  Similarity=0.363  Sum_probs=91.2

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHH--HHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITR--AMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~--~~~~E~~~------------------------------   94 (392)
                      ...+.||+|+||+||++.+..+++.||+|.+.........  ...+|+.+                              
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence            4466799999999999999999999999999887653322  22335554                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                           +++. ....+++.++..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||.+..
T Consensus        82 ~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i-~H~dikp~NIl~~~~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen   82 GGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGI-VHRDIKPENILLDENGEVKLIDFGSSVK  147 (260)
T ss_dssp             TEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTE-EESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred             ccccccccc-ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence                 4444 22368999999999999999999999999 9999999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.78  E-value=2.2e-18  Score=157.43  Aligned_cols=108  Identities=23%  Similarity=0.353  Sum_probs=91.5

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------------------   94 (392)
                      +.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+                                  
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            36899999999999999999999999886543 2345667788766                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~  144 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC-IHRDLAARNCLVTEKNVLKISDFGMSREE  144 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccchheEEEcCCCcEEECccccCccc
Confidence             3444333468999999999999999999999999 99999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.78  E-value=5.3e-19  Score=162.21  Aligned_cols=106  Identities=19%  Similarity=0.325  Sum_probs=87.2

Q ss_pred             CCCCcceeEEEEEEE--eecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828          51 PDSDFRYSAIFTPIG--IYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~--~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------------   94 (392)
                      .||+|+||.||+|..  ..+++.+|+|.+.....  ...+.+.+|+.+                                
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999964  35678999999865432  345567777665                                


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        82 L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i-~H~dlkp~nill~~~~~~kl~Dfg~~~~~  145 (257)
T cd05116          82 LNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNF-VHRDLAARNVLLVTQHYAKISDFGLSKAL  145 (257)
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccchhhEEEcCCCeEEECCCcccccc
Confidence              333222 258999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.77  E-value=8.4e-19  Score=167.24  Aligned_cols=130  Identities=22%  Similarity=0.270  Sum_probs=102.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |.....||+|+||.||++.+..++..||+|.+..... ...+.+.+|+.+                              
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   86 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   86 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCC
Confidence            4445679999999999999999999999999976432 345667788776                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                           +++... ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||+++......      
T Consensus        87 ~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g  164 (331)
T cd06649          87 GGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG  164 (331)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCE-EcCCCChhhEEEcCCCcEEEccCcccccccccccccCCC
Confidence                 223222 2588999999999999999999986 57 999999999999999999999999987542211      


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       165 ~~~y~aPE~~~~~~~~~~~DiwslG~il~e  194 (331)
T cd06649         165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE  194 (331)
T ss_pred             CcCcCCHhHhcCCCCCchHhHHHHHHHHHH
Confidence                           112388888888887

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.77  E-value=9.2e-19  Score=163.10  Aligned_cols=112  Identities=25%  Similarity=0.282  Sum_probs=91.6

Q ss_pred             eeccCCCCCcceeEEEEEEE----eecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIG----IYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~----~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.+|+|+||.||++..    ..+++.||+|.++... ....+.+.+|+.+                          
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            45567899999999999974    4568899999997553 3444567788766                          


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                 +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecccchheEEEcCCCCEEECCCcccccc
Confidence                       2332222358899999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=6.8e-19  Score=176.08  Aligned_cols=116  Identities=16%  Similarity=0.178  Sum_probs=96.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeec-CcEEEEEEcCCCChhHHHHHHHHHHH--------------------------H
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYK-GRIFAIKRIPKKSVDITRAMKKELKI--------------------------D   95 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~   95 (392)
                      ...|...+.+|+|+||.||++.+..+ ++.||+|.+..........+.+|+.+                          +
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            34477788899999999999998877 78899998866555555667778776                          2


Q ss_pred             Hhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          96 IMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        96 ~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      |+..            ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-vHrDlkp~NIll~~~~~~kL~DFgla~~~~  220 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM-MHRDLKSANIFLMPTGIIKLGDFGFSKQYS  220 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE-EECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence            2221            12258899999999999999999999999 999999999999999999999999997643

>KOG0671|consensus

Probab=99.77  E-value=1.1e-18  Score=160.01  Aligned_cols=134  Identities=19%  Similarity=0.184  Sum_probs=106.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+|.....+|+|+||+|..|.+..++..||||+++.-.. -.+...-|++.                           
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            47788889999999999999999999999999999964321 12333334443                           


Q ss_pred             -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----------------
Q psy6828          95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----------------  144 (392)
Q Consensus        95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----------------  144 (392)
                                   +++.. +..+++...++.+.+|+++++.|||+.++ +|-||||+|||+.+.                
T Consensus       166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl-~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL-THTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce-eecCCChheEEEeccceEEEeccCCccceec
Confidence                         55554 44469999999999999999999999999 999999999999422                


Q ss_pred             ----ceEEEeccccchhcccccc--------------------ccccccceeeeeee
Q psy6828         145 ----WVVKLADFGLTEFKRDAEY--------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       145 ----~~~kl~DFGla~~~~~~~~--------------------~~~d~~s~g~~~~~  177 (392)
                          ..+|++|||.|.+..+...                    ...|+||+||+++|
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~E  301 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVE  301 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEE
Confidence                2389999999987654332                    23499999999999

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.77  E-value=4.7e-18  Score=160.26  Aligned_cols=135  Identities=22%  Similarity=0.294  Sum_probs=108.2

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------   94 (392)
                      ...+|...+.+|+|+||.||++.+..+++.||+|.+.....   ...+.+.+|+.+                        
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            44556677889999999999999988999999999864432   334567777766                        


Q ss_pred             --HH--------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---
Q psy6828          95 --DI--------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---  161 (392)
Q Consensus        95 --~~--------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---  161 (392)
                        ++        +......+++..+..++.|++.||.|||+.++ +||||+|+||+++.++.+||+|||++......   
T Consensus        93 v~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i-~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~  171 (307)
T cd06607          93 VMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER-IHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF  171 (307)
T ss_pred             EHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence              22        22233368999999999999999999999999 99999999999999999999999988643211   


Q ss_pred             -------------------ccccccccceeeeeee
Q psy6828         162 -------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 -------------------~~~~~d~~s~g~~~~~  177 (392)
                                         .....|+||||+++|+
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~e  206 (307)
T cd06607         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  206 (307)
T ss_pred             cCCccccCceeeeccCCCCCCcccchHHHHHHHHH
Confidence                               1124599999999999

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.77  E-value=4.3e-19  Score=165.10  Aligned_cols=111  Identities=22%  Similarity=0.362  Sum_probs=89.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      ...+.||+|+||.||++.+..+|+.||+|.++....  .....+.+|+.+                              
T Consensus         3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (284)
T cd07839           3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD   82 (284)
T ss_pred             eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC
Confidence            345679999999999999999999999999865322  112334445544                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++......+++..+..++.||+.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~  149 (284)
T cd07839          83 QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV-LHRDLKPQNLLINKNGELKLADFGLARAF  149 (284)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence                2333334468999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0610|consensus

Probab=99.77  E-value=6.4e-19  Score=163.13  Aligned_cols=109  Identities=19%  Similarity=0.184  Sum_probs=92.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HHh
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~l   97 (392)
                      ...+.||.|.-|+||++....++..+|+|++.+..+.   ...+.+.|.+|                          +|.
T Consensus        80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC  159 (459)
T KOG0610|consen   80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC  159 (459)
T ss_pred             HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence            3467899999999999999999999999999987763   33455556665                          221


Q ss_pred             ----------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          98 ----------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        98 ----------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                ++.+..|++..++.|+.+++.||+|||-.|| |.|||||+|||+.++|++-|+||-|+.
T Consensus       160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi-vYRDLKPENILvredGHIMLsDFDLS~  227 (459)
T KOG0610|consen  160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI-VYRDLKPENILVREDGHIMLSDFDLSL  227 (459)
T ss_pred             CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce-eeccCCcceeEEecCCcEEeeeccccc
Confidence                      1234479999999999999999999999999 999999999999999999999999875

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.77  E-value=8.7e-19  Score=161.74  Aligned_cols=111  Identities=17%  Similarity=0.167  Sum_probs=90.8

Q ss_pred             eeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.||+|+||.||++...   ..+..||+|.++.... .....+.+|+..                           
T Consensus         7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   86 (266)
T cd05064           7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE   86 (266)
T ss_pred             eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence            344667999999999999865   3456899999976532 334556777776                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||.+..
T Consensus        87 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i-iH~dikp~nili~~~~~~~l~dfg~~~~  156 (266)
T cd05064          87 YMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQE  156 (266)
T ss_pred             eCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eeccccHhhEEEcCCCcEEECCCccccc
Confidence                    3444444468999999999999999999999999 9999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.77  E-value=8.2e-19  Score=163.95  Aligned_cols=113  Identities=25%  Similarity=0.378  Sum_probs=90.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+                            
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            345667789999999999999999999999999865432 212234555544                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                            +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  152 (291)
T cd07870          85 MHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI-LHRDLKPQNLLISYLGELKLADFGLARA  152 (291)
T ss_pred             ccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHHEEEcCCCcEEEeccccccc
Confidence                  2222222357888899999999999999999999 9999999999999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PHA02988 hypothetical protein; Provisional

Probab=99.77  E-value=3.2e-18  Score=159.60  Aligned_cols=124  Identities=15%  Similarity=0.149  Sum_probs=98.4

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------------   94 (392)
                      ..+|+|+++.||+|..  +|+.||||.+++....   ..+.+.+|+.+                                
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            4589999999999974  7999999999765432   24667788877                                


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhcccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-----  161 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-----  161 (392)
                             +++.. ...+++.....++.|++.||.|||+. ++ +||||||+|||++.++.+||+|||+++.....     
T Consensus       104 ~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~  181 (283)
T PHA02988        104 CTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNK-PYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV  181 (283)
T ss_pred             CCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCC-CCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence                   22222 12588889999999999999999984 78 89999999999999999999999998752211     


Q ss_pred             -----------------ccccccccceeeeeee
Q psy6828         162 -----------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 -----------------~~~~~d~~s~g~~~~~  177 (392)
                                       .....|+||||+++|+
T Consensus       182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~e  214 (283)
T PHA02988        182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWE  214 (283)
T ss_pred             CcccccCHHHhhhccccccchhhhhHHHHHHHH
Confidence                             1123499999999998

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.77  E-value=2e-18  Score=167.50  Aligned_cols=55  Identities=27%  Similarity=0.387  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .+++.++..++.|++.||.|||++++ +||||||+|||+++++.+||+|||+++..
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~gi-iHrDLkp~Nil~~~~~~~kL~DfGla~~~  262 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNC-IHRDVAARNVLLTDGRVAKICDFGLARDI  262 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCE-EeccCchheEEEeCCCeEEEeeceeeeec
Confidence            36788899999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.77  E-value=1.9e-18  Score=160.76  Aligned_cols=110  Identities=25%  Similarity=0.308  Sum_probs=94.4

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------   94 (392)
                      ..+.||+|+||.||++.+..++..+++|.+........+.+.+|+.+                                 
T Consensus         9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~   88 (282)
T cd06643           9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA   88 (282)
T ss_pred             HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCc
Confidence            35679999999999999999999999999987666666677778766                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        .++.+....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||++...
T Consensus        89 l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          89 VDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI-IHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCcccEEEccCCCEEEccccccccc
Confidence              2333333468999999999999999999999999 99999999999999999999999998654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.77  E-value=1.5e-18  Score=161.49  Aligned_cols=105  Identities=17%  Similarity=0.216  Sum_probs=83.6

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||.||++.+..+++.||+|.+.+....   ......+|...                                 
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            379999999999999999999999998754321   11122233221                                 


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                           +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||+++++.++++|||++..
T Consensus        81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~i-vH~dikp~Nil~~~~~~~~l~dfg~~~~  146 (279)
T cd05633          81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACD  146 (279)
T ss_pred             CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-CCCCCCHHHEEECCCCCEEEccCCccee
Confidence                 22222 2258999999999999999999999999 9999999999999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.77  E-value=1.1e-18  Score=160.93  Aligned_cols=111  Identities=25%  Similarity=0.340  Sum_probs=93.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+                               
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~   90 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGG   90 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCC
Confidence            4557789999999999999999999999999976544444556667665                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++... ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        91 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~  156 (267)
T cd06646          91 GSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGK-MHRDIKGANILLTDNGDVKLADFGVAAKI  156 (267)
T ss_pred             CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCCEEECcCccceee
Confidence                223222 258999999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.77  E-value=1.4e-18  Score=162.44  Aligned_cols=114  Identities=27%  Similarity=0.319  Sum_probs=97.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      .+.|...+.+|+|+||.||++.+..+++.|++|.+........+.+.+|+.+                            
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            4456667789999999999999999999999999987766666777778765                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             .++.+....+++..+..++.|++.+|.|||+.++ +||||||+||+++.++.+||+|||++..
T Consensus        91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~  159 (292)
T cd06644          91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI-IHRDLKAGNVLLTLDGDIKLADFGVSAK  159 (292)
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe-eecCCCcceEEEcCCCCEEEccCcccee
Confidence                   2222333468999999999999999999999999 9999999999999999999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=4.2e-18  Score=156.16  Aligned_cols=107  Identities=18%  Similarity=0.318  Sum_probs=89.1

Q ss_pred             CCCCCcceeEEEEEEEeecC---cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKG---RIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      +.||+|+||.||+|....++   ..||+|.+..... ...+.+.+|+.+                               
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            36899999999999876555   7899999986654 344567777766                               


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++.... .+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i-~H~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060          81 PLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHF-VHRDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             cHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCe-eccCcccceEEEcCCCcEEecccccccee
Confidence               3333332 58999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.76  E-value=1.2e-18  Score=166.24  Aligned_cols=131  Identities=21%  Similarity=0.275  Sum_probs=103.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.+|+|.+..... ...+.+.+|+.+                             
T Consensus         6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   85 (333)
T cd06650           6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   85 (333)
T ss_pred             hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence            35556789999999999999999999999999876432 344567788776                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                            +++.+. ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||++.......     
T Consensus        86 ~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  163 (333)
T cd06650          86 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (333)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCE-EecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence                  333332 2588899999999999999999975 67 999999999999999999999999987542211     


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~  194 (333)
T cd06650         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE  194 (333)
T ss_pred             CCccccCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence                            112388888888887

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=1.1e-18  Score=162.26  Aligned_cols=109  Identities=26%  Similarity=0.459  Sum_probs=91.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------HHhhcCC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------DIMENED  101 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------~~l~~~~  101 (392)
                      ...||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+                          +++..+.
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   85 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS   85 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence            456999999999999999999999999986542 2344567778776                          3333322


Q ss_pred             ----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         102 ----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       102 ----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          ..+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus        86 l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nill~~~~~~~l~dfg~~~~~  145 (279)
T cd06619          86 LDVYRKIPEHVLGRIAVAVVKGLTYLWSLKI-LHRDVKPSNMLVNTRGQVKLCDFGVSTQL  145 (279)
T ss_pred             hHHhhcCCHHHHHHHHHHHHHHHHHHHHCCE-eeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence                147888999999999999999999999 99999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.76  E-value=1e-18  Score=163.22  Aligned_cols=112  Identities=24%  Similarity=0.357  Sum_probs=90.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||||.+..... .....+.+|+.+                              
T Consensus         7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07844           7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD   86 (291)
T ss_pred             eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence            4455679999999999999988999999999865432 112334566665                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++......+++..+..++.|+++||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          87 TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV-LHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccCCHHHEEEcCCCCEEECcccccccc
Confidence                2233333368999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.76  E-value=6.2e-18  Score=155.32  Aligned_cols=110  Identities=22%  Similarity=0.310  Sum_probs=89.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.+|+|+||.||++.. .+++.||+|.+..... ..+.+.+|+.+                               
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (261)
T cd05072           8 IKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK   85 (261)
T ss_pred             eEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence            44567899999999999984 4667899999875443 24567777776                               


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++.. ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~  153 (261)
T cd05072          86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVI  153 (261)
T ss_pred             CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhhEEecCCCcEEECCCccceec
Confidence                22322 22357888999999999999999999999 99999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.76  E-value=2.6e-18  Score=158.66  Aligned_cols=111  Identities=24%  Similarity=0.344  Sum_probs=92.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS-VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~E~~~----------------------------   94 (392)
                      ...+.+|+|+||.||+|....+++   .||||.+.... ....+.+.+|+.+                            
T Consensus         7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   86 (269)
T cd05065           7 KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEF   86 (269)
T ss_pred             EEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEec
Confidence            345679999999999999887765   69999997642 3445678888776                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||++...
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~-~H~dl~p~nili~~~~~~kl~dfg~~~~~  156 (269)
T cd05065          87 MENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFL  156 (269)
T ss_pred             CCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccChheEEEcCCCcEEECCCcccccc
Confidence                   4444444468999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.76  E-value=1.2e-18  Score=160.60  Aligned_cols=111  Identities=25%  Similarity=0.335  Sum_probs=91.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.||+|+||.||.+.+..+++.||+|.++.........+.+|+.+                               
T Consensus        11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~   90 (267)
T cd06645          11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGG   90 (267)
T ss_pred             HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Confidence            3445679999999999999999999999999876544444556666655                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++... ..+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus        91 ~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          91 GSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGK-MHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence                222222 268999999999999999999999999 99999999999999999999999998644

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=2.2e-18  Score=168.25  Aligned_cols=109  Identities=16%  Similarity=0.161  Sum_probs=88.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||++...  .+++.||+|.+.....     ..+|+.+                           
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~-----~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT-----PGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccccc-----HHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            34677889999999999999754  3567899999865432     2334444                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       167 ~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~gi-vHrDlkp~Nill~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        167 KYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGI-IHRDVKTENIFLDEPENAVLGDFGAACKLD  236 (392)
T ss_pred             hcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEccCccccccC
Confidence                   3332 22368999999999999999999999999 999999999999999999999999987543

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.76  E-value=6.4e-18  Score=154.66  Aligned_cols=129  Identities=16%  Similarity=0.197  Sum_probs=102.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+++.||+|.++... ....+.+.+|+.+                                
T Consensus         4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   83 (255)
T cd08219           4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG   83 (255)
T ss_pred             EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence            3567999999999999999999999999986432 2344566666655                                


Q ss_pred             ---HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++. .....+++..+..++.|++.||.|||++++ +|+||||+||++++++.++++|||+++......        
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  162 (255)
T cd08219          84 DLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV-LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVG  162 (255)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCcceEEECCCCcEEEcccCcceeecccccccccccC
Confidence               2222 123358899999999999999999999999 999999999999999999999999987543211        


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       163 ~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~  192 (255)
T cd08219         163 TPYYVPPEIWENMPYNNKSDIWSLGCILYE  192 (255)
T ss_pred             CccccCHHHHccCCcCchhhhhhhchhhee
Confidence                           113499999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.76  E-value=9.7e-18  Score=157.35  Aligned_cols=129  Identities=23%  Similarity=0.300  Sum_probs=96.8

Q ss_pred             ccCCCCCcceeEEEEEEEeecCc--EEEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS-VDITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------   94 (392)
                      ..+.||+|+||.||++....++.  .+++|.++... ....+.+.+|+.+                              
T Consensus         6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~   85 (297)
T cd05089           6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA   85 (297)
T ss_pred             eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence            35579999999999999877765  47888886432 2334456666554                              


Q ss_pred             ------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 ------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 ------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                            +++...               ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg  164 (297)
T cd05089          86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF-IHRDLAARNVLVGENLASKIADFG  164 (297)
T ss_pred             CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCcCCcceEEECCCCeEEECCcC
Confidence                  222211               0147888999999999999999999999 999999999999999999999999


Q ss_pred             cchhcccc----------------------ccccccccceeeeeee
Q psy6828         154 LTEFKRDA----------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       154 la~~~~~~----------------------~~~~~d~~s~g~~~~~  177 (392)
                      ++......                      .....|+||||+++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  210 (297)
T cd05089         165 LSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE  210 (297)
T ss_pred             CCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHH
Confidence            98532110                      0112488888888887

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.76  E-value=2.6e-18  Score=159.71  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=84.1

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||.||++.+..+++.||+|.+.+....   .......|...                                 
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            379999999999999999999999998765331   11112222211                                 


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++.. ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCE-EcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence                 22222 2358999999999999999999999999 99999999999999999999999998644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.76  E-value=1.6e-18  Score=166.86  Aligned_cols=134  Identities=22%  Similarity=0.278  Sum_probs=103.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------H------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------D------------   95 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~------------   95 (392)
                      .+.|...+.||+|+||.||++.+..+++.||||.+.+..  ....+.+.+|+.+             +            
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            455677788999999999999999999999999986532  2334456667665             0            


Q ss_pred             -------Hhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828          96 -------IMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        96 -------~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  163 (392)
                             ++..     ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.......
T Consensus        95 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~  173 (353)
T cd07850          95 DVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  173 (353)
T ss_pred             cEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence                   0000     01137888899999999999999999999 9999999999999999999999999875433211


Q ss_pred             ----------------------ccccccceeeeeee
Q psy6828         164 ----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~  177 (392)
                                            ...|+||+|+++|+
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~  209 (353)
T cd07850         174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  209 (353)
T ss_pred             CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHH
Confidence                                  12378888887777

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.75  E-value=1.4e-18  Score=159.53  Aligned_cols=130  Identities=22%  Similarity=0.280  Sum_probs=104.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.+|+|+||.||++.+.. ++.+|+|.+........+.+.+|+.+                               
T Consensus         8 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (261)
T cd05148           8 FTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK   86 (261)
T ss_pred             HHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence            3446789999999999999777 89999999987766556667777776                               


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                          +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......       
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~  165 (261)
T cd05148          87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS-IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK  165 (261)
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence                33332 22358999999999999999999999999 999999999999999999999999987543211       


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~  196 (261)
T cd05148         166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYE  196 (261)
T ss_pred             CceEecCHHHHccCCCCchhhHHHHHHHHHH
Confidence                            112488888888887

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.75  E-value=1.6e-18  Score=161.19  Aligned_cols=110  Identities=26%  Similarity=0.463  Sum_probs=89.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ..+.||+|+||.||++.+..+++.||+|.++....  ...+.+.+|+.+                               
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (285)
T cd07861           4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSM   83 (285)
T ss_pred             EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCC
Confidence            34679999999999999999999999999865422  223456666665                               


Q ss_pred             ---HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++..  ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  151 (285)
T cd07861          84 DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV-LHRDLKPQNLLIDNKGVIKLADFGLARAF  151 (285)
T ss_pred             CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCCHHHEEEcCCCcEEECcccceeec
Confidence               22222  11368999999999999999999999999 99999999999999999999999988643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG4721|consensus

Probab=99.75  E-value=2.4e-19  Score=171.41  Aligned_cols=131  Identities=21%  Similarity=0.234  Sum_probs=102.0

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------HHhhcCC
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------DIMENED  101 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------~~l~~~~  101 (392)
                      .=||.|+.|.||+|+..  ++.||||+++.-+.   ..+..+.++..|                         ++|+.+.
T Consensus       130 eWlGSGaQGAVF~Grl~--netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~  207 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLH--NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR  207 (904)
T ss_pred             hhhccCcccceeeeecc--CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC
Confidence            34899999999999754  89999999864432   223333334333                         4444444


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------------------
Q psy6828         102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------------------  162 (392)
Q Consensus       102 ~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------------------  162 (392)
                       .++......|..+|+.|+.|||.+.| ||||||.-||||..+..+||+|||.++......                   
T Consensus       208 -~itp~llv~Wsk~IA~GM~YLH~hKI-IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn  285 (904)
T KOG4721|consen  208 -PITPSLLVDWSKGIAGGMNYLHLHKI-IHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN  285 (904)
T ss_pred             -ccCHHHHHHHHHHhhhhhHHHHHhhH-hhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc
Confidence             68888899999999999999999999 999999999999999999999999998765432                   


Q ss_pred             ---cccccccceeeeeee--ccCCCCc
Q psy6828         163 ---YTGTDQHSFLQHTYH--VNRAGST  184 (392)
Q Consensus       163 ---~~~~d~~s~g~~~~~--~~~~~~~  184 (392)
                         ..+.|+||||+++||  +.+.+|-
T Consensus       286 ePcsEKVDIwSfGVVLWEmLT~EiPYk  312 (904)
T KOG4721|consen  286 EPCSEKVDIWSFGVVLWEMLTGEIPYK  312 (904)
T ss_pred             CCcccccceehhHHHHHHHHhcCCCcc
Confidence               122399999999999  5555543

>KOG0608|consensus

Probab=99.75  E-value=6.8e-19  Score=170.15  Aligned_cols=159  Identities=19%  Similarity=0.234  Sum_probs=119.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..++..+.||-|+||+|.++....|...||+|.+++...   .+...+..|..|                          
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            346667899999999999999889999999999988765   233344455555                          


Q ss_pred             HHhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---cc
Q psy6828          95 DIMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---EY  163 (392)
Q Consensus        95 ~~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---~~  163 (392)
                      +|+-.++        +.|.|..++.++.++.+|+++.|..|. |||||||+|||||.+|++||+|||||.-+...   .+
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGF-IHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY  787 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY  787 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccc-eecccCccceEEccCCceeeeeccccccceecccccc
Confidence            3332222        169999999999999999999999999 99999999999999999999999999743211   00


Q ss_pred             cc-------------------------------------ccccceeeeeeeccC----CCCcccccccccchhhhccCCH
Q psy6828         164 TG-------------------------------------TDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPR  202 (392)
Q Consensus       164 ~~-------------------------------------~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~  202 (392)
                      ..                                     ..-.-.|+.-|.+|+    .+++...|+|..+.+|+.|+-.
T Consensus       788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g  867 (1034)
T KOG0608|consen  788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG  867 (1034)
T ss_pred             ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence            00                                     022234667777665    5566777888888888887743


Q ss_pred             H
Q psy6828         203 S  203 (392)
Q Consensus       203 ~  203 (392)
                      .
T Consensus       868 ~  868 (1034)
T KOG0608|consen  868 Q  868 (1034)
T ss_pred             C
Confidence            3

>KOG0669|consensus

Probab=99.75  E-value=1.7e-19  Score=156.86  Aligned_cols=156  Identities=17%  Similarity=0.267  Sum_probs=109.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC----CCh--------hHHHHHHHHHHH------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK----KSV--------DITRAMKKELKI------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~--------~~~~~~~~E~~~------------------   94 (392)
                      .|.....+|+|.||+||+++.+.+|+.||+|++--    ...        ...+.+.+|...                  
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            34446679999999999999999999999987632    111        111122222221                  


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                    -++.+...+++..++..++.++.+||.|+|+..+ +|||+||+|+||+.+|.+||+|||+++.+..
T Consensus        98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~ki-lHRDmKaaNvLIt~dgilklADFGlar~fs~  176 (376)
T KOG0669|consen   98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKI-LHRDMKAANVLITKDGILKLADFGLARAFST  176 (376)
T ss_pred             eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhH-HhhcccHhhEEEcCCceEEeeccccccceec
Confidence                          3333444579999999999999999999999999 9999999999999999999999999987655


Q ss_pred             cccccccccceee-eeee-ccC-----CCCcccccccccchhhhccCC
Q psy6828         161 AEYTGTDQHSFLQ-HTYH-VNR-----AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       161 ~~~~~~d~~s~g~-~~~~-~~~-----~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      ......--|.-.+ ++|. .|+     ..+..++|.|..++++..|..
T Consensus       177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt  224 (376)
T KOG0669|consen  177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT  224 (376)
T ss_pred             ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence            4433322232222 2333 332     445556777777777666654

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.75  E-value=5.8e-18  Score=155.04  Aligned_cols=126  Identities=22%  Similarity=0.305  Sum_probs=100.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------   94 (392)
                      ..+.+|+|+||.||++..  .|+.||+|.+..... ..+.+.+|+.+                                 
T Consensus        10 ~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   86 (256)
T cd05039          10 LGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS   86 (256)
T ss_pred             ceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCc
Confidence            356799999999999975  489999999976644 45667777766                                 


Q ss_pred             --HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828          95 --DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------  162 (392)
Q Consensus        95 --~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------  162 (392)
                        +++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......         
T Consensus        87 L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i-~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  165 (256)
T cd05039          87 LVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF-VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKW  165 (256)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cchhcccceEEEeCCCCEEEcccccccccccccccCCCcccc
Confidence              3332222 258999999999999999999999999 999999999999999999999999887543211         


Q ss_pred             -----------cccccccceeeeeee
Q psy6828         163 -----------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------~~~~d~~s~g~~~~~  177 (392)
                                 ....|+||+|+++|+
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~  191 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWE  191 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHH
Confidence                       012388888888876

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.75  E-value=2e-18  Score=162.05  Aligned_cols=115  Identities=21%  Similarity=0.306  Sum_probs=95.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l   97 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+........+.+.+|+.+                          +++
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            455667789999999999999989999999999976555555667777765                          222


Q ss_pred             hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      .+.       ...+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++....
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i-~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~  166 (297)
T cd06656          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (297)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence            211       1247889999999999999999999999 999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.75  E-value=6.3e-18  Score=155.25  Aligned_cols=129  Identities=24%  Similarity=0.310  Sum_probs=101.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||++.. .+++.||+|.+...... .+.+.+|+.+                               
T Consensus         8 ~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~   85 (260)
T cd05067           8 LKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENG   85 (260)
T ss_pred             ceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCC
Confidence            34466799999999999984 46788999999765543 3456777666                               


Q ss_pred             ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++.. ....+++.++..++.|++.||.|||+.++ +||||||+||++++++.++|+|||++.......        
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  164 (260)
T cd05067          86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY-IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAK  164 (260)
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe-ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCc
Confidence               22222 23368999999999999999999999999 999999999999999999999999986543111        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       165 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~e  195 (260)
T cd05067         165 FPIKWTAPEAINYGTFTIKSDVWSFGILLTE  195 (260)
T ss_pred             ccccccCHHHhccCCcCcccchHHHHHHHHH
Confidence                            112489999988887

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.75  E-value=2.8e-18  Score=164.04  Aligned_cols=55  Identities=33%  Similarity=0.397  Sum_probs=51.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~i-vHrDikp~Nill~~~~~vkL~DfG~a~~~  223 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI  223 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCcceEEEeCCCcEEEeccccchhc
Confidence            47888899999999999999999999 99999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.75  E-value=2.3e-18  Score=161.42  Aligned_cols=111  Identities=31%  Similarity=0.440  Sum_probs=90.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-----HHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-----ITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~----------------------------   94 (392)
                      ..+.||+|+||.||+|.+..+++.||||.+......     ....+.+|+.+                            
T Consensus         4 ~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   83 (298)
T cd07841           4 KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEF   83 (298)
T ss_pred             eeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcc
Confidence            345699999999999999999999999999765432     23345556555                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++......+++..+..++.|+++||.|||++++ +|+||||+||+++.++.+||+|||+++...
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841          84 METDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI-LHRDLKPNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             cCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCChhhEEEcCCCCEEEccceeeeecc
Confidence                  2333332368999999999999999999999999 999999999999999999999999987543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.75  E-value=7.2e-18  Score=156.75  Aligned_cols=111  Identities=25%  Similarity=0.348  Sum_probs=88.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||+|+||+||+|....+++    .+++|.+..... .....+..|+..                           
T Consensus        10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~   89 (279)
T cd05111          10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQL   89 (279)
T ss_pred             eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEe
Confidence            345679999999999999877776    478888864432 233455555543                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-iH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM-VHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE-eccccCcceEEEcCCCcEEEcCCccceec
Confidence                   4444444468999999999999999999999999 99999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0579|consensus

Probab=99.75  E-value=2.9e-19  Score=172.59  Aligned_cols=108  Identities=24%  Similarity=0.286  Sum_probs=94.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      ...||.|+||+||++.++.++-.-|-|.+...+-..++.+.-|+.|                                  
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV  116 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV  116 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence            4579999999999999998888889999988887888888888888                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                       .++-.-+..|++.++..+++|++.||.|||+++| ||||||..|||++-+|.++|+|||.+..
T Consensus       117 DaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~i-IHRDLKAGNiL~TldGdirLADFGVSAK  179 (1187)
T KOG0579|consen  117 DAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNI-IHRDLKAGNILLTLDGDIRLADFGVSAK  179 (1187)
T ss_pred             hHHHHHhccccchHHHHHHHHHHHHHHHHHhhcch-hhhhccccceEEEecCcEeeeccccccc
Confidence             1111122269999999999999999999999999 9999999999999999999999999763

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.75  E-value=2.8e-18  Score=158.10  Aligned_cols=112  Identities=15%  Similarity=0.274  Sum_probs=91.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||||.++...   ......+.+|+.+                            
T Consensus         4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08228           4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence            345667999999999999999999999999886432   2334456777666                            


Q ss_pred             -------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++.   .....+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||++...
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~~~nil~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe-eCCCCCHHHEEEcCCCCEEECccccceec
Confidence                   1221   122347889999999999999999999999 99999999999999999999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.75  E-value=8.8e-18  Score=154.35  Aligned_cols=129  Identities=24%  Similarity=0.288  Sum_probs=99.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||++.+..+ ..+|+|.+..... ..+.+.+|+.+                               
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~   85 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG   85 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence            55567899999999999986543 5699999875543 23456777766                               


Q ss_pred             ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++.. ....+++..+..++.|++.||.|||+.++ +||||||+||++++++.++|+|||+++......        
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  164 (260)
T cd05069          86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAK  164 (260)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCc
Confidence               33322 22247889999999999999999999999 999999999999999999999999987542211        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ...+|+||+|+++|+
T Consensus       165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~e  195 (260)
T cd05069         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTE  195 (260)
T ss_pred             cchhhCCHHHhccCCcChHHHHHHHHHHHHH
Confidence                            012488999988888

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.75  E-value=9.6e-18  Score=160.79  Aligned_cols=54  Identities=30%  Similarity=0.383  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i-~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCccCeEEEcCCCcEEEEeccccccc
Confidence            5777888999999999999999999 99999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.75  E-value=6.1e-18  Score=154.64  Aligned_cols=128  Identities=19%  Similarity=0.281  Sum_probs=102.4

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------------   94 (392)
                      .+.+|+|+||.||++.+..+++.|++|.+....  ....+.+.+|+.+                                
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG   84 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence            456999999999999999999999999987543  2344566777766                                


Q ss_pred             ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++... ...+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||+++......        
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i-~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~  163 (256)
T cd08529          85 DLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI-LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVG  163 (256)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcceEEEeCCCCEEEcccccceeccCccchhhcccc
Confidence               333322 3368899999999999999999999999 999999999999999999999999887543221        


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~  193 (256)
T cd08529         164 TPYYLSPELCEDKPYNEKSDVWALGVVLYE  193 (256)
T ss_pred             CccccCHHHhcCCCCCCccchHHHHHHHHH
Confidence                           123488888888887

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.75  E-value=3.9e-18  Score=158.51  Aligned_cols=110  Identities=22%  Similarity=0.399  Sum_probs=87.8

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HH---
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DI---   96 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~---   96 (392)
                      ..+.+|+|+||.||++.+..+|+.||+|.++.... .....+..|...                           ++   
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~   84 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT   84 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc
Confidence            34569999999999999999999999999876532 222334444433                           22   


Q ss_pred             -----hhc---CCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          97 -----MEN---EDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        97 -----l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +..   .+..+++..+..++.|++.||.|||++ ++ +||||||+||+++.++.+||+|||+++..
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i-~h~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          85 SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV-IHRDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe-ecCCCCHHHEEECCCCCEEEeeccccccc
Confidence                 211   223589999999999999999999997 88 99999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0614|consensus

Probab=99.75  E-value=2.7e-19  Score=169.07  Aligned_cols=114  Identities=24%  Similarity=0.258  Sum_probs=94.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------------   94 (392)
                      ...||-|+||.|-+.........+|+|++++..+   .+.+.+..|..+                               
T Consensus       425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            4569999999999987555555699999988765   445666677666                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT  164 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~  164 (392)
                          ..++ ..+.|++..++.++..+++|+.|||++|| |.|||||+|++|+.+|-+||.|||+|+.+.....+
T Consensus       505 GElWTiLr-dRg~Fdd~tarF~~acv~EAfeYLH~k~i-IYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT  576 (732)
T KOG0614|consen  505 GELWTILR-DRGSFDDYTARFYVACVLEAFEYLHRKGI-IYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT  576 (732)
T ss_pred             chhhhhhh-hcCCcccchhhhhHHHHHHHHHHHHhcCc-eeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence                2222 23379999999999999999999999999 99999999999999999999999999998776644

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.75  E-value=6.9e-18  Score=155.09  Aligned_cols=110  Identities=21%  Similarity=0.303  Sum_probs=89.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.+|+|+||.||++.+. +++.||+|.++..... .+.+.+|+.+                               
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (261)
T cd05068           8 IQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY   85 (261)
T ss_pred             eeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc-HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence            444578999999999999854 5678999999765432 3456677665                               


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  153 (261)
T cd05068          86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY-IHRDLAARNVLVGENNICKVADFGLARVI  153 (261)
T ss_pred             CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCCcceEEEcCCCCEEECCcceEEEc
Confidence                33322 22358999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.75  E-value=3.3e-18  Score=160.28  Aligned_cols=110  Identities=21%  Similarity=0.336  Sum_probs=91.5

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhcC-
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMENE-  100 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~~-  100 (392)
                      ....||+|+||.||++.+..+++.||||.+........+.+.+|+..                          +++... 
T Consensus        26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~  105 (292)
T cd06658          26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA  105 (292)
T ss_pred             hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence            34569999999999999988999999999876555555667777665                          122211 


Q ss_pred             ------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         101 ------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       101 ------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            ...+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||++...
T Consensus       106 L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658         106 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGV-IHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence                  1258899999999999999999999999 99999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.75  E-value=9.7e-18  Score=154.01  Aligned_cols=129  Identities=22%  Similarity=0.299  Sum_probs=100.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.+|+|+||.||++.+. ++..+|+|.+...... .+.+.+|+.+                               
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~   85 (260)
T cd05070           8 LQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG   85 (260)
T ss_pred             hhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC-HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence            455678999999999999754 6678999999765432 3457777766                               


Q ss_pred             ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++.. ....+++.++..++.|++.||.|||++++ +||||||+||++++++.++|+|||++.......        
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  164 (260)
T cd05070          86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAK  164 (260)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCC
Confidence               23322 22358999999999999999999999999 999999999999999999999999987542211        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||||+++|+
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  195 (260)
T cd05070         165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTE  195 (260)
T ss_pred             CCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence                            013488888888887

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.75  E-value=3.5e-18  Score=157.45  Aligned_cols=107  Identities=21%  Similarity=0.243  Sum_probs=83.8

Q ss_pred             CCCCcceeEEEEEEEee------------cCcEEEEEEcCCCChhHHHHHHHHHHH------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIY------------KGRIFAIKRIPKKSVDITRAMKKELKI------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~------------~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------   94 (392)
                      .||+|+||.||+|+...            ....+++|.+..........+..|+.+                        
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            58999999999997432            223689999876554444556666554                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce-------EEEeccccch
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV-------VKLADFGLTE  156 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~-------~kl~DFGla~  156 (392)
                                 .++......+++..+..++.||+.||.|||++++ +||||||+|||++.++.       +|++|||++.
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          82 VEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL-VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe-ECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence                       2233333468999999999999999999999999 99999999999987654       8999999886


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       161 ~~  162 (262)
T cd05077         161 TV  162 (262)
T ss_pred             cc
Confidence            43

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.75  E-value=4.7e-18  Score=155.67  Aligned_cols=110  Identities=25%  Similarity=0.286  Sum_probs=91.1

Q ss_pred             CCCCCcceeEEEEEEEee-cCc--EEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIY-KGR--IFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~-~~~--~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      +.+|+|+||.||++.+.. .++  .||||.+..... ...+.+.+|+..                               
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            358999999999999765 333  699999988766 566778888776                               


Q ss_pred             ---HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ---DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ---~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                         +++.+.. ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF-IHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc-cccccCcccEEEecCCEEEeccccccccccc
Confidence               2222222 358899999999999999999999999 9999999999999999999999999876533

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.75  E-value=3.7e-18  Score=157.41  Aligned_cols=111  Identities=25%  Similarity=0.351  Sum_probs=91.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS-VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~E~~~----------------------------   94 (392)
                      ...+.+|+|+||.||++....+++   .+|+|.+.... ....+.+.+|+.+                            
T Consensus         8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (268)
T cd05063           8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY   87 (268)
T ss_pred             eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence            346679999999999999876665   79999997653 2344567777766                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++......+++.++..++.|++.|+.|||+.++ +||||||+||+++.++.+|++|||++...
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY-VHRDLAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhhEEEcCCCcEEECCCccceec
Confidence                   3444344468999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.75  E-value=2.5e-18  Score=164.29  Aligned_cols=114  Identities=27%  Similarity=0.405  Sum_probs=91.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||+|.+..... .....+.+|+.+                            
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            345567789999999999999999999999999864322 233445566554                            


Q ss_pred             ---HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++..      ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++..
T Consensus        85 lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          85 IVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             EEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEECCCCCEEECcccceeec
Confidence               11110      11258999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.75  E-value=4.6e-18  Score=156.87  Aligned_cols=113  Identities=24%  Similarity=0.317  Sum_probs=92.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.+|+|+||.||+|.+..++.   .+|+|.++.... ...+.+.+|+.+                           
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (267)
T cd05066           6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE   85 (267)
T ss_pred             eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            3456789999999999999875554   799999975432 334567777766                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++......+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++++|||++....
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eehhhchhcEEECCCCeEEeCCCCcccccc
Confidence                    3443334468999999999999999999999999 999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.75  E-value=4.8e-18  Score=159.94  Aligned_cols=129  Identities=26%  Similarity=0.344  Sum_probs=97.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcE--EEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRI--FAIKRIPKKS-VDITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~~-~~~~~~~~~E~~~------------------------------   94 (392)
                      ..+.||+|+||.||+|.+..++..  +|+|.+.... ......+.+|+.+                              
T Consensus        11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   90 (303)
T cd05088          11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   90 (303)
T ss_pred             eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence            346799999999999998877764  5888776432 2334566677665                              


Q ss_pred             ------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 ------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 ------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                            +++...               ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-~H~dlkp~Nili~~~~~~kl~dfg  169 (303)
T cd05088          91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFG  169 (303)
T ss_pred             CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc-cccccchheEEecCCCcEEeCccc
Confidence                  222211               1247889999999999999999999999 999999999999999999999999


Q ss_pred             cchhcccc----------------------ccccccccceeeeeee
Q psy6828         154 LTEFKRDA----------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       154 la~~~~~~----------------------~~~~~d~~s~g~~~~~  177 (392)
                      +++.....                      .....|+||+|+++|+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  215 (303)
T cd05088         170 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  215 (303)
T ss_pred             cCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHH
Confidence            98532110                      0123488888888887

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.75  E-value=3.1e-18  Score=160.73  Aligned_cols=114  Identities=18%  Similarity=0.304  Sum_probs=95.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l   97 (392)
                      ..|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+                          +++
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            455566779999999999999989999999999987655555667777776                          222


Q ss_pred             hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .++       +..+++.++..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus       100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi-~H~dLkp~Nill~~~~~~kl~dfg~~~~~  166 (296)
T cd06654         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEcCCCCEEECccccchhc
Confidence            211       1247899999999999999999999999 99999999999999999999999988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2.5e-18  Score=159.68  Aligned_cols=113  Identities=25%  Similarity=0.268  Sum_probs=95.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+                              
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD   85 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence            34556779999999999999988999999999987666666677788766                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||++...
T Consensus        86 ~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611          86 GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV-IHRDLKAGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChhhEEECCCCCEEEccCccchhh
Confidence                 2333333468999999999999999999999999 99999999999999999999999987643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.75  E-value=3.1e-18  Score=157.00  Aligned_cols=108  Identities=24%  Similarity=0.356  Sum_probs=88.6

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------   94 (392)
                      ..+.+|+|+||.||++.+. ++..+|+|.+.+.... .+.+.+|+.+                                 
T Consensus         8 ~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGC   85 (256)
T ss_pred             hhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCC
Confidence            4567999999999999865 5678999998765432 2346667666                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++......+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus        86 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~dfg~~~~~  150 (256)
T cd05059          86 LLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYV  150 (256)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccccHhhEEECCCCcEEECCcccceec
Confidence              3333333368999999999999999999999999 99999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.75  E-value=6.1e-18  Score=157.07  Aligned_cols=111  Identities=22%  Similarity=0.292  Sum_probs=91.4

Q ss_pred             ccCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCChh-HHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKSVD-ITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~~-~~~~~~~E~~~----------------------------   94 (392)
                      ..+.+|+|+||.||++...    .+++.||+|.+...... ..+.+.+|+..                            
T Consensus         8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   87 (284)
T cd05038           8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM   87 (284)
T ss_pred             hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence            3467999999999999854    34789999999866543 45678888766                            


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++....
T Consensus        88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          88 EYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY-IHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             ecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence                     2232222248999999999999999999999999 999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.74  E-value=5.6e-18  Score=160.25  Aligned_cols=150  Identities=21%  Similarity=0.309  Sum_probs=100.8

Q ss_pred             ccCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      ....||+|+||.||+|.+..  ++..||+|.+......  ..+.+|+.+                               
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS--MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA   82 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc--HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence            34579999999999998654  5689999999765432  234556555                               


Q ss_pred             -----HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchh
Q psy6828          95 -----DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~  157 (392)
                           +++..        ....+++..+..++.|++.||.|||++++ +||||||+|||+    +.++.+||+|||+++.
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE-EcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence                 11110        11248888999999999999999999999 999999999999    4567899999999986


Q ss_pred             ccccccccccc-cceeeeeeeccCC-----CCcccccccccchhhhccC
Q psy6828         158 KRDAEYTGTDQ-HSFLQHTYHVNRA-----GSTESLHCKCDEALLFEML  200 (392)
Q Consensus       158 ~~~~~~~~~d~-~s~g~~~~~~~~~-----~~~~~~d~~~~~~lL~~~l  200 (392)
                      .........+. -..|...|.+|+.     .++.+.|+|+.+.++..++
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~  210 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL  210 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHH
Confidence            54322111111 1124444544441     1233445555555555544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=4.4e-18  Score=156.14  Aligned_cols=114  Identities=26%  Similarity=0.363  Sum_probs=96.6

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.+|+|+||.||++.+..+++.+++|.+........+.+.+|+.+                              
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~   83 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG   83 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence            34556779999999999999988999999999986655556677788776                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                           +++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++....
T Consensus        84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          84 GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK-IHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCChhhEEECCCCCEEECccccchhhh
Confidence                 3343333479999999999999999999999999 999999999999999999999999887543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1151|consensus

Probab=99.74  E-value=7.2e-19  Score=163.77  Aligned_cols=166  Identities=17%  Similarity=0.221  Sum_probs=121.2

Q ss_pred             cccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-------hHHHHHHHHHHH--------------
Q psy6828          36 WFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-------DITRAMKKELKI--------------   94 (392)
Q Consensus        36 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~--------------   94 (392)
                      |.+......+|+....||+|||+.||++.+....+.||+|+-..++-       .-.+...+|..|              
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD  534 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD  534 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence            34445567889999999999999999999999999999998653321       122345556555              


Q ss_pred             ---------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcC---CceEEE
Q psy6828          95 ---------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDS---RWVVKL  149 (392)
Q Consensus        95 ---------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~---~~~~kl  149 (392)
                                           +|+-.....+++++++.|+-||+.||.||.+... |||-||||.||||-+   .|.+||
T Consensus       535 yfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI  614 (775)
T KOG1151|consen  535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI  614 (775)
T ss_pred             eeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence                                 2222223368999999999999999999997543 699999999999954   378999


Q ss_pred             eccccchhcccccccc---ccccceeeeeee--ccC--------CCCcccccccccchhhhccCC
Q psy6828         150 ADFGLTEFKRDAEYTG---TDQHSFLQHTYH--VNR--------AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       150 ~DFGla~~~~~~~~~~---~d~~s~g~~~~~--~~~--------~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      +|||+++.+.+.....   .+..|-|+-.|+  .|+        ..-+.++|.|+.+.++++.+.
T Consensus       615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY  679 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY  679 (775)
T ss_pred             eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence            9999999987766543   245555555554  333        112346778888888877664

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.74  E-value=7.8e-18  Score=155.53  Aligned_cols=109  Identities=20%  Similarity=0.281  Sum_probs=87.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCc--EEEEEEcCCCC--hhHHHHHHHHHHH------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS--VDITRAMKKELKI------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~--~~~~~~~~~E~~~------------------------------   94 (392)
                      .+.||+|+||.||+|....+++  .||+|.++...  ....+.+.+|..+                              
T Consensus         4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   83 (272)
T cd05075           4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV   83 (272)
T ss_pred             ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence            4679999999999999877765  69999987542  2334556666655                              


Q ss_pred             --HHhhc--------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMEN--------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~--------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +|+..              ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  162 (272)
T cd05075          84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSKKI  162 (272)
T ss_pred             EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhheEEcCCCCEEECCCCccccc
Confidence              11111              11237888999999999999999999999 99999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.74  E-value=2.3e-18  Score=162.45  Aligned_cols=113  Identities=25%  Similarity=0.425  Sum_probs=90.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+|+.||+|.++....  .......+|+.+                             
T Consensus         9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (309)
T cd07845           9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME   88 (309)
T ss_pred             eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence            4556679999999999999999999999999864322  111223345444                             


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++......+++.++..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++....
T Consensus        89 ~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          89 YCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI-IHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccceeeecC
Confidence                   2222223468999999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.74  E-value=4.3e-18  Score=177.09  Aligned_cols=113  Identities=19%  Similarity=0.196  Sum_probs=91.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.||+|+++....   ...+++.+|+.+                           
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME   82 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP   82 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence            35556789999999999999999999999999975422   334567888777                           


Q ss_pred             --------HHhhcC----------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 --------DIMENE----------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 --------~~l~~~----------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                              +++.+.          ...++...+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus        83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI-IHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV-LHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc-cccCCchheEEEcCCCCEEEEecCcce
Confidence                    222110          1134556778899999999999999999 999999999999999999999999987


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       162 ~i  163 (932)
T PRK13184        162 FK  163 (932)
T ss_pred             ec
Confidence            65

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.74  E-value=3.9e-18  Score=157.12  Aligned_cols=109  Identities=24%  Similarity=0.330  Sum_probs=89.4

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-----hhHHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-----VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~E~~~----------------------------   94 (392)
                      ..+.+|+|+||.||.+.+..+++.||||.+....     ....+.+.+|+.+                            
T Consensus         6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~   85 (265)
T cd06652           6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFM   85 (265)
T ss_pred             EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEE
Confidence            3567999999999999999999999999885321     1334566777666                            


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++.+. ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++..
T Consensus        86 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          86 EHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMI-VHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEecCCCCEEECcCcccccc
Confidence                     222222 247888899999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.74  E-value=1.4e-17  Score=152.31  Aligned_cols=110  Identities=25%  Similarity=0.374  Sum_probs=93.4

Q ss_pred             CCCCCcceeEEEEEEEeec---CcEEEEEEcCCCChh-HHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSVD-ITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~-~~~~~~~E~~~-------------------------------   94 (392)
                      +.+|+|+||.||++.+...   +..|++|.++..... ..+.+.+|+..                               
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            3689999999999998866   889999999866443 25667777766                               


Q ss_pred             ----HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ----DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                          +++...        ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF-VHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc-ccCccCcceEEECCCCcEEEccccccccccc
Confidence                444443        3578999999999999999999999999 9999999999999999999999999986544

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.74  E-value=6.6e-18  Score=154.02  Aligned_cols=105  Identities=22%  Similarity=0.342  Sum_probs=87.7

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------------   94 (392)
                      .||+|+||.||++.. .+++.||+|.++.... .....+.+|+.+                                   
T Consensus         2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             ccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            589999999999984 4788999999876543 333457777776                                   


Q ss_pred             HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +++......+++..+..++.|++.+|.|+|++++ +||||||+||+++.++.+||+|||++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~  142 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSRQ  142 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccChheEEEcCCCeEEECCCcccee
Confidence            3333333468899999999999999999999999 9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.74  E-value=5.2e-18  Score=157.43  Aligned_cols=125  Identities=20%  Similarity=0.216  Sum_probs=99.3

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------------   94 (392)
                      ||+|+||+||++.+..+|+.||+|.+.+...   ...+.+.+|+.+                                  
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999999999999999999976433   223345566665                                  


Q ss_pred             -HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828          95 -DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------  162 (392)
Q Consensus        95 -~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------  162 (392)
                       +++.. ....+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||++.......          
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI-VYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence             22222 22358999999999999999999999999 999999999999999999999999887543110          


Q ss_pred             ------------cccccccceeeeeee
Q psy6828         163 ------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------~~~~d~~s~g~~~~~  177 (392)
                                  ....|+||+|+++|+
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~  186 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYE  186 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence                        113499999999888

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG1094|consensus

Probab=99.74  E-value=2.7e-18  Score=164.74  Aligned_cols=161  Identities=20%  Similarity=0.269  Sum_probs=123.5

Q ss_pred             ccccceeeeccccce--eeeeeccccc-----cccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHH
Q psy6828          15 LRQSTVVKLVDNHKL--FDWFCSWFQN-----VHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITR   86 (392)
Q Consensus        15 ~~E~~~l~~l~hpni--v~~~~~~~~~-----~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~   86 (392)
                      ..++.-+....|+|-  +.|...-.-.     ...++.-+..+.||+|.||.|.+|. ...+.+||+|.++...- ..++
T Consensus       502 ~a~iv~~Q~vs~~Nss~v~y~~~~~~k~~al~EfPRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~~r~  580 (807)
T KOG1094|consen  502 EADIVTLQGVSGGNSSAVPYLPPGVGKGPALVEFPRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKNARN  580 (807)
T ss_pred             ccccccccCCCCCccccccccCcccccCcchhhcchhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchhHHH
Confidence            345666777888884  4443222000     1134555668899999999999997 44479999999987654 5568


Q ss_pred             HHHHHHHH--------------------------HHhhcCCcC----------CCHHHHHHHHHHHHHHHHHHhcCCccc
Q psy6828          87 AMKKELKI--------------------------DIMENEDVK----------LDNMFIASLVADILRGMLYLHDSALRY  130 (392)
Q Consensus        87 ~~~~E~~~--------------------------~~l~~~~~~----------l~~~~~~~i~~qi~~~l~ylH~~~iii  130 (392)
                      .|.+|+.+                          +|+++++++          +.......++.||++|+.||.+.++ +
T Consensus       581 ~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf-V  659 (807)
T KOG1094|consen  581 DFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF-V  659 (807)
T ss_pred             HHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch-h
Confidence            89999998                          777775541          2445567899999999999999999 9


Q ss_pred             ccCCCCCceEEcCCceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828         131 HGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       131 HrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ||||.+.|+|++.++++||+|||.++.+-...                         .+.+|+|+||+++||
T Consensus       660 Hrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE  731 (807)
T KOG1094|consen  660 HRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE  731 (807)
T ss_pred             hccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHH
Confidence            99999999999999999999999999432222                         234599999999999

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=4.7e-18  Score=161.89  Aligned_cols=118  Identities=17%  Similarity=0.113  Sum_probs=90.4

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCC-----ChhHHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKK-----SVDITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~-----~~~~~~~~~~E~~~---------------------   94 (392)
                      ....|...+.||+|+||+||+|++.. +++.||||++...     .....+.+.+|+.+                     
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~L   95 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGL   95 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEE
Confidence            45667788899999999999999876 6788899987543     12234568888887                     


Q ss_pred             --HHhhcCCcCC-CHHHHHHHHHHHHHHHHHHhcCCcccccCC-CCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --DIMENEDVKL-DNMFIASLVADILRGMLYLHDSALRYHGNL-KASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --~~l~~~~~~l-~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl-Kp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                        +|+....+.. .......++.|++++|.|||++++ +|||| ||+|||++.++.+||+|||+|+....
T Consensus        96 VmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gI-iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188         96 VRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGI-THNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             EEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCC-eeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence              3332222110 001125788999999999999999 99999 99999999999999999999997654

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.74  E-value=4.9e-18  Score=155.53  Aligned_cols=106  Identities=18%  Similarity=0.229  Sum_probs=85.8

Q ss_pred             CCCCcceeEEEEEEEeecC----------cEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKG----------RIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      .||+|+||.||++.+..++          ..+++|.+...... ...+.+|+.+                          
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            5899999999999988776          35888887654332 4556666655                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-------eEEEeccccchhc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-------VVKLADFGLTEFK  158 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-------~~kl~DFGla~~~  158 (392)
                              +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++       .+|++|||++...
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL-VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe-ecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence                    2333333268899999999999999999999999 9999999999999887       7999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.74  E-value=7.8e-18  Score=156.78  Aligned_cols=113  Identities=24%  Similarity=0.364  Sum_probs=92.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||+|.++....  ...+.+.+|+.+                             
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   82 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV   82 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence            4456679999999999999999999999999875422  334567777766                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                           +.+......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++....
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~  151 (288)
T cd07833          83 ERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI-IHRDIKPENILVSESGVLKLCDFGFARALR  151 (288)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEEeeecccccC
Confidence                 1222222358999999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.74  E-value=1.1e-17  Score=157.52  Aligned_cols=111  Identities=24%  Similarity=0.362  Sum_probs=89.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++    .||+|.+..... .....+.+|+.+                           
T Consensus        10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~   89 (303)
T cd05110          10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQL   89 (303)
T ss_pred             eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehh
Confidence            456789999999999999887776    579998875433 223356667665                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe-eccccccceeeecCCCceEEccccccccc
Confidence                   2222333357889999999999999999999999 99999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.74  E-value=3.2e-18  Score=160.68  Aligned_cols=110  Identities=20%  Similarity=0.302  Sum_probs=91.0

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhc--
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMEN--   99 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~--   99 (392)
                      ....+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+                          +++..  
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            35579999999999999988999999999976544445567777665                          12211  


Q ss_pred             -----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         100 -----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       100 -----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus       105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vH~dl~p~Nill~~~~~~kL~dfg~~~~~  167 (297)
T cd06659         105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQI  167 (297)
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence                 11258899999999999999999999999 99999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.5e-17  Score=152.73  Aligned_cols=130  Identities=25%  Similarity=0.304  Sum_probs=101.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .+...+.+|+|+||.||++.+. +++.||||.+...... .+.+.+|+.+                              
T Consensus         7 ~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           7 SLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             heeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC-HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            3555678999999999999854 5688999999865443 3456677666                              


Q ss_pred             -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                           +++.. ....+++..+..++.|++.|+.|||++++ +|+||||+||++++++.+|++|||++.......      
T Consensus        85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (261)
T cd05034          85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY-IHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG  163 (261)
T ss_pred             CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence                 23322 22358999999999999999999999999 999999999999999999999999987543110      


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~  196 (261)
T cd05034         164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE  196 (261)
T ss_pred             cCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence                              113489999988887

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=5.5e-18  Score=156.13  Aligned_cols=111  Identities=23%  Similarity=0.492  Sum_probs=90.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---------hHHHHHHHHHHH-----------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---------DITRAMKKELKI-----------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~~E~~~-----------------------   94 (392)
                      .....+|+|+||.||.|.+..+++.||+|.+.....         ...+.+.+|+.+                       
T Consensus         3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (267)
T cd06628           3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN   82 (267)
T ss_pred             cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence            345679999999999999988999999998865432         123456677665                       


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                  +++... ..+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++...
T Consensus        83 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i-vH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          83 IFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI-IHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             EEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc-ccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence                        222222 358889999999999999999999999 999999999999999999999999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.74  E-value=3.9e-18  Score=158.67  Aligned_cols=112  Identities=23%  Similarity=0.410  Sum_probs=93.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      ...+.+|+|+||.||++.+..+|+.||+|.+.....  ...+.+.+|+.+                              
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (286)
T cd07832           3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP   82 (286)
T ss_pred             eEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecccC
Confidence            445679999999999999998999999999976542  234567777765                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                          +++......+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.++++|||++....
T Consensus        83 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          83 SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI-MHRDLKPANLLISADGVLKIADFGLARLFS  150 (286)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence                3333333468999999999999999999999999 999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.74  E-value=3.3e-18  Score=158.06  Aligned_cols=113  Identities=25%  Similarity=0.392  Sum_probs=90.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.+|+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+                             
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            345556789999999999999999999999999865432 22344455443                             


Q ss_pred             -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                   +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCHHHEEECCCCCEEEccCCCceec
Confidence                         22222 22358899999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.74  E-value=6.4e-18  Score=157.21  Aligned_cols=112  Identities=20%  Similarity=0.317  Sum_probs=91.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHh
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l   97 (392)
                      |.....+|+|+||.||++.+..+++.||+|.+.....  ...+.+.+|+.+                          +++
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            3445679999999999999998999999998864322  223456667666                          121


Q ss_pred             --------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          98 --------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        98 --------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              ......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (286)
T cd07847          83 DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC-IHRDVKPENILITKQGQIKLCDFGFARIL  150 (286)
T ss_pred             CccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCChhhEEEcCCCcEEECccccceec
Confidence                    1222368999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.74  E-value=4.4e-18  Score=159.68  Aligned_cols=115  Identities=22%  Similarity=0.328  Sum_probs=95.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l   97 (392)
                      ..|...+.+|.|+||.||++.+..+++.||+|.+........+.+.+|+..                          +++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            446667789999999999999999999999999976655556677777776                          111


Q ss_pred             hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      ..+       ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i-~H~dL~p~Nili~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655          99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQV-IHRDIKSDNVLLGMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence            111       1258999999999999999999999999 999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.7e-17  Score=153.18  Aligned_cols=110  Identities=21%  Similarity=0.242  Sum_probs=87.9

Q ss_pred             ccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      ..+.+|+|+||.||.|....+   +..||+|.++....  ...+.+.+|+..                            
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   82 (273)
T cd05035           3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP   82 (273)
T ss_pred             cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence            456799999999999987654   47899999875432  334567777665                            


Q ss_pred             ----HHhh--------------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 ----DIME--------------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 ----~~l~--------------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                          +++.              .....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++
T Consensus        83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~  161 (273)
T cd05035          83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF-IHRDLAARNCMLREDMTVCVADFGLSK  161 (273)
T ss_pred             EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCe-eccccchheEEECCCCeEEECCcccee
Confidence                0111              111257888999999999999999999999 999999999999999999999999987


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       162 ~~  163 (273)
T cd05035         162 KI  163 (273)
T ss_pred             ec
Confidence            54

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG3653|consensus

Probab=99.74  E-value=3.1e-18  Score=160.89  Aligned_cols=106  Identities=22%  Similarity=0.340  Sum_probs=87.9

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      ...+|+|.||.||+|..  +++.||||+++.   +....+..|..|                                  
T Consensus       215 ~eli~~Grfg~V~KaqL--~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQL--DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             HHHhhcCccceeehhhc--cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence            45689999999999964  479999999963   445567777777                                  


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC--------CcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDS--------ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~--------~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +|+...  .++|.+..+++.-++.||+|||+.        ..|+|||||+.|||+.+|+++.|+|||+|..+.
T Consensus       290 h~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~  367 (534)
T KOG3653|consen  290 HPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE  367 (534)
T ss_pred             ccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence                   555544  489999999999999999999962        225999999999999999999999999998765


Q ss_pred             cc
Q psy6828         160 DA  161 (392)
Q Consensus       160 ~~  161 (392)
                      ..
T Consensus       368 p~  369 (534)
T KOG3653|consen  368 PG  369 (534)
T ss_pred             CC
Confidence            43

>KOG1345|consensus

Probab=99.74  E-value=8e-18  Score=148.02  Aligned_cols=138  Identities=20%  Similarity=0.247  Sum_probs=105.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HH
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DI   96 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~   96 (392)
                      .|.....+|+|-||.+.++.|+.+++.+++|.+++.. .....|.+|...                            ++
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            3455678999999999999999999999999998664 334567777765                            11


Q ss_pred             hhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCceEEEeccccchhccccc-----
Q psy6828          97 MENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        97 l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~~kl~DFGla~~~~~~~-----  162 (392)
                      .-.+       ...+.|.....++.|+++|+.|+|++++ +|||||.+|||+-  +...+||||||+++......     
T Consensus       104 aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknl-VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~  182 (378)
T KOG1345|consen  104 APRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNL-VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEY  182 (378)
T ss_pred             CccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccch-hhcccccceEEEecCCccEEEeeecccccccCceehhhhh
Confidence            1111       1147778889999999999999999999 9999999999993  23579999999987532211     


Q ss_pred             --------------------cccccccceeeeeee--ccCCCCc
Q psy6828         163 --------------------YTGTDQHSFLQHTYH--VNRAGST  184 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~--~~~~~~~  184 (392)
                                          ...+|+|.||+++|.  ...++..
T Consensus       183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence                                123499999999987  4445544

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.74  E-value=8.5e-18  Score=153.87  Aligned_cols=113  Identities=16%  Similarity=0.278  Sum_probs=91.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|++|.||.+.+..+++.||+|.+.....  ...+.+.+|+.+                             
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            3445679999999999999999999999999865432  334456666655                             


Q ss_pred             -------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++.. ....+++.++..++.|++.|+.|||++++ +||||||+||+++.++.++|+|||++....
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i-~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI-LHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCchhEEEecCCcEEEecccceEEec
Confidence                   22221 12248899999999999999999999999 999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.74  E-value=7.9e-18  Score=156.57  Aligned_cols=110  Identities=21%  Similarity=0.276  Sum_probs=87.3

Q ss_pred             ccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ..+.||+|+||.||+|.+..+     ++.||+|.++.... ...+.+.+|..+                           
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e   88 (283)
T cd05091           9 FMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFS   88 (283)
T ss_pred             HHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEE
Confidence            356799999999999987543     57899999975533 334557777665                           


Q ss_pred             --------HHhhc---------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828          95 --------DIMEN---------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus        95 --------~~l~~---------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                              +++..               ....+++..+..++.|++.||.|+|++++ +||||||+||++++++.+||+|
T Consensus        89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~kl~D  167 (283)
T cd05091          89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV-VHKDLATRNVLVFDKLNVKISD  167 (283)
T ss_pred             cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc-cccccchhheEecCCCceEecc
Confidence                    12210               01247888899999999999999999999 9999999999999999999999


Q ss_pred             cccchhc
Q psy6828         152 FGLTEFK  158 (392)
Q Consensus       152 FGla~~~  158 (392)
                      ||+++..
T Consensus       168 fg~~~~~  174 (283)
T cd05091         168 LGLFREV  174 (283)
T ss_pred             ccccccc
Confidence            9998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.74  E-value=5.4e-18  Score=156.18  Aligned_cols=111  Identities=16%  Similarity=0.291  Sum_probs=91.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||||.+.....   .....+.+|+.+                             
T Consensus         5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   84 (267)
T cd08229           5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELA   84 (267)
T ss_pred             hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEec
Confidence            345679999999999999999999999998865332   334466677666                             


Q ss_pred             ------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.   .....+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++++|||++...
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence                  2222   122358999999999999999999999999 99999999999999999999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.74  E-value=8.4e-18  Score=154.06  Aligned_cols=107  Identities=27%  Similarity=0.405  Sum_probs=87.4

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.||+|+||.||++... ++..+|+|.+...... .+.+.+|+.+                                  
T Consensus         9 ~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L   86 (256)
T cd05114           9 MKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS-EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCL   86 (256)
T ss_pred             eeEecCCcCceEEEEEec-cCceEEEEecccCCcc-HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcH
Confidence            467999999999999754 5668999998755432 2456667666                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114          87 LNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccCcceEEEcCCCeEEECCCCCcccc
Confidence             3333333368999999999999999999999999 99999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.74  E-value=7.6e-18  Score=155.34  Aligned_cols=110  Identities=25%  Similarity=0.333  Sum_probs=90.3

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~---------------------------   94 (392)
                      .....+|+|+||.||++.+..+++.||+|.+.....     ...+.+.+|+.+                           
T Consensus         5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~   84 (266)
T cd06651           5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF   84 (266)
T ss_pred             cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence            345679999999999999999999999999864321     234567777766                           


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++... ..+++.....++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        85 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i-~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          85 MEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence                      222222 257889999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.74  E-value=6.4e-18  Score=157.59  Aligned_cols=109  Identities=19%  Similarity=0.318  Sum_probs=88.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HH----
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DI----   96 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~----   96 (392)
                      .+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+                           ++    
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~   88 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDIS   88 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCC
Confidence            4579999999999999999999999999975432 334456667654                           11    


Q ss_pred             ----h----hcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          97 ----M----ENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        97 ----l----~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          .    ......+++..+..++.|++.||.|||+. ++ +||||||+||+++.++.+||+|||+++..
T Consensus        89 l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  158 (288)
T cd06616          89 LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI-IHRDVKPSNILLDRNGNIKLCDFGISGQL  158 (288)
T ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe-eccCCCHHHEEEccCCcEEEeecchhHHh
Confidence                1    11224688999999999999999999974 88 99999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.73  E-value=7.1e-18  Score=155.62  Aligned_cols=108  Identities=25%  Similarity=0.417  Sum_probs=90.2

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------------   94 (392)
                      ..+|+|+||.||++.+..++..||+|.+........+.+.+|+.+                                   
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   93 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS   93 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence            358999999999999998999999999987766666778888776                                   


Q ss_pred             HHhhcCCcCC--CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhc
Q psy6828          95 DIMENEDVKL--DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ~~l~~~~~~l--~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~  158 (392)
                      +++......+  ++..+..++.|++.||.|||++++ +||||||+||+++. ++.++|+|||++...
T Consensus        94 ~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI-VHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             HHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            3333222234  788889999999999999999999 99999999999976 678999999998654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.73  E-value=6.4e-18  Score=157.25  Aligned_cols=109  Identities=27%  Similarity=0.364  Sum_probs=88.7

Q ss_pred             eccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||+|+||+||++.    ...+++.||+|.++.... ...+.+.+|+.+                           
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            456789999999998764    335678999999976532 344567777766                           


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++..  ..+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus        87 ~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          87 MEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             ecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccChheEEEcCCCcEEEeeccccccc
Confidence                      22211  158999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.73  E-value=1.9e-17  Score=154.55  Aligned_cols=112  Identities=20%  Similarity=0.367  Sum_probs=91.3

Q ss_pred             eeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.+|+|+||.||++...     .++..+|+|.+........+.+.+|+.+                          
T Consensus         7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (288)
T cd05093           7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF   86 (288)
T ss_pred             eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence            455778999999999999853     3456799999987665556677788776                          


Q ss_pred             ---------HHhhcC------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 ---------DIMENE------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 ---------~~l~~~------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                               +++...            ...+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg  165 (288)
T cd05093          87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF-VHRDLATRNCLVGENLLVKIGDFG  165 (288)
T ss_pred             EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccCcceEEEccCCcEEeccCC
Confidence                     222211            1248999999999999999999999999 999999999999999999999999


Q ss_pred             cchhc
Q psy6828         154 LTEFK  158 (392)
Q Consensus       154 la~~~  158 (392)
                      +++..
T Consensus       166 ~~~~~  170 (288)
T cd05093         166 MSRDV  170 (288)
T ss_pred             ccccc
Confidence            98754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.73  E-value=2.2e-17  Score=152.13  Aligned_cols=113  Identities=23%  Similarity=0.240  Sum_probs=91.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.||+|+||+||+|....+   ...||||.++.... .....+.+|+.+                           
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   85 (266)
T cd05033           6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE   85 (266)
T ss_pred             ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence            34466799999999999987654   45799999876543 334556777666                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++......+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||+++...
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          86 YMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCcceEEEcCCCCEEECccchhhccc
Confidence                    3333333468999999999999999999999999 999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.73  E-value=6.9e-18  Score=161.92  Aligned_cols=134  Identities=23%  Similarity=0.332  Sum_probs=104.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------HHhh---------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------DIME---------   98 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~~l~---------   98 (392)
                      ...|...+.||+|+||.||++.+..+++.||+|++.+...  ...+.+.+|+.+             ++..         
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence            3456667889999999999999999999999999975432  234456667665             0000         


Q ss_pred             ---------c-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          99 ---------N-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        99 ---------~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                               .       ....+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||+++......
T Consensus        96 ~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~  174 (345)
T cd07877          96 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM  174 (345)
T ss_pred             cEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCChHHEEEcCCCCEEEecccccccccccc
Confidence                     0       01248899999999999999999999999 999999999999999999999999987532211


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e  210 (345)
T cd07877         175 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  210 (345)
T ss_pred             cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHH
Confidence                                 123589999988888

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.73  E-value=5.5e-18  Score=158.43  Aligned_cols=111  Identities=18%  Similarity=0.255  Sum_probs=92.4

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                             
T Consensus         4 ~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (290)
T cd05580           4 EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYV   83 (290)
T ss_pred             EEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecC
Confidence            345679999999999999999999999999875432   334566777766                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++... ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++...
T Consensus        84 ~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580          84 PGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDI-VYRDLKPENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence                  222222 368999999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG1095|consensus

Probab=99.73  E-value=6.2e-18  Score=175.13  Aligned_cols=130  Identities=25%  Similarity=0.313  Sum_probs=106.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc-----EEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR-----IFAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      ...+.||+|.||.||.|.......     .||||.+.+.. .+..+.|.+|..+                          
T Consensus       695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l  774 (1025)
T KOG1095|consen  695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL  774 (1025)
T ss_pred             EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence            447899999999999998664332     49999997653 4677889999888                          


Q ss_pred             HHhhc---------C------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 DIMEN---------E------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ~~l~~---------~------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +||+.         .      ...++-.+...++.||++|+.||++++. |||||..+|+||+.+..+||+|||+|+.+-
T Consensus       775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~f-vHRDLAaRNCLL~~~r~VKIaDFGlArDiy  853 (1025)
T KOG1095|consen  775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHF-VHRDLAARNCLLDERRVVKIADFGLARDIY  853 (1025)
T ss_pred             hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCC-cCcchhhhheeecccCcEEEcccchhHhhh
Confidence            44443         3      3368899999999999999999999999 999999999999999999999999999432


Q ss_pred             ccc-------------------------cccccccceeeeeee
Q psy6828         160 DAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                         .+++|+||||+++||
T Consensus       854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWE  896 (1025)
T KOG1095|consen  854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWE  896 (1025)
T ss_pred             hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHH
Confidence            211                         134599999999999

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.73  E-value=1.5e-17  Score=157.59  Aligned_cols=131  Identities=24%  Similarity=0.318  Sum_probs=105.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.+.....   ...+.+.+|+.+                            
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            5567789999999999999999999999999875432   334567777766                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-------  161 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-------  161 (392)
                            +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++......       
T Consensus       107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i-~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  185 (317)
T cd06635         107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP  185 (317)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCc
Confidence                  2222333468999999999999999999999999 99999999999999999999999987643211       


Q ss_pred             ---------------ccccccccceeeeeee
Q psy6828         162 ---------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ---------------~~~~~d~~s~g~~~~~  177 (392)
                                     .....|+||+|+++|+
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~e  216 (317)
T cd06635         186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIE  216 (317)
T ss_pred             cccChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence                           1123499999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0696|consensus

Probab=99.73  E-value=6.7e-19  Score=162.68  Aligned_cols=150  Identities=20%  Similarity=0.224  Sum_probs=109.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------HHhh
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI---------------------------DIME   98 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~---------------------------~~l~   98 (392)
                      ...||+|+||+|.++..+.+.+.||||++++.-+-   ..+--..|-.+                           +|..
T Consensus       354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn  433 (683)
T KOG0696|consen  354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN  433 (683)
T ss_pred             EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence            34699999999999999999999999999875431   11111222222                           2332


Q ss_pred             cCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccc
Q psy6828          99 NED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS  170 (392)
Q Consensus        99 ~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s  170 (392)
                      .++        +++.+..+..++.+|+-||-|||+++| |.||||.+|+||+.+|++||+|||+++.--....  +.-.-
T Consensus       434 GGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgI-iYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~--TTkTF  510 (683)
T KOG0696|consen  434 GGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV--TTKTF  510 (683)
T ss_pred             CchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCe-eeeeccccceEeccCCceEeeecccccccccCCc--ceeee
Confidence            222        268999999999999999999999999 9999999999999999999999999985322211  11123


Q ss_pred             eeeeeeeccC----CCCcccccccccchhhhccCC
Q psy6828         171 FLQHTYHVNR----AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       171 ~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      .|++-|.+|+    .++..++|+|+.+.+|++|+.
T Consensus       511 CGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla  545 (683)
T KOG0696|consen  511 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  545 (683)
T ss_pred             cCCCcccccceEEecccccchhHHHHHHHHHHHHc
Confidence            4666666666    445556677777777776664

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.73  E-value=8.7e-18  Score=154.15  Aligned_cols=109  Identities=24%  Similarity=0.345  Sum_probs=88.3

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      .....+|+|+||.||.+... .+..+|+|.+...... .+.+.+|+.+                                
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05113           7 TFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG   84 (256)
T ss_pred             EEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc-HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence            34467999999999999754 3456999998765433 3457777776                                


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++..
T Consensus        85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~d~g~~~~~  150 (256)
T cd05113          85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF-IHRDLAARNCLVDDQGCVKVSDFGLSRYV  150 (256)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccCcceEEEcCCCCEEECCCccceec
Confidence               3333333368999999999999999999999999 99999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.73  E-value=8.3e-18  Score=154.09  Aligned_cols=126  Identities=23%  Similarity=0.283  Sum_probs=96.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+.+|+|+||.||++..  .|+.||+|.+.....  .+.+.+|+.+                                
T Consensus         9 ~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~   84 (256)
T cd05082           9 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK   84 (256)
T ss_pred             eeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch--HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence            3456799999999999964  488999999865432  3456677665                                


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                          +++.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++......       
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  163 (256)
T cd05082          85 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV  163 (256)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eccccchheEEEcCCCcEEecCCccceeccccCCCCccce
Confidence                33322 22247889999999999999999999999 999999999999999999999999987543211       


Q ss_pred             -------------cccccccceeeeeee
Q psy6828         163 -------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------~~~~d~~s~g~~~~~  177 (392)
                                   ...+|+||+|+++|+
T Consensus       164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~  191 (256)
T cd05082         164 KWTAPEALREKKFSTKSDVWSFGILLWE  191 (256)
T ss_pred             eecCHHHHccCCCCchhhhHHHHHHHHH
Confidence                         112477777777776

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.73  E-value=6.6e-18  Score=156.67  Aligned_cols=106  Identities=20%  Similarity=0.220  Sum_probs=82.6

Q ss_pred             CCCCcceeEEEEEEEeecC------------------------cEEEEEEcCCCChhHHHHHHHHHHH------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKG------------------------RIFAIKRIPKKSVDITRAMKKELKI------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~------------------------~~vAiK~~~~~~~~~~~~~~~E~~~------------   94 (392)
                      .||+|+||.||+|....++                        ..||+|.+..........+..|..+            
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            4899999999999854322                        3589999976554444556666654            


Q ss_pred             -----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc------
Q psy6828          95 -----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW------  145 (392)
Q Consensus        95 -----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~------  145 (392)
                                             .++......+++..+..++.|++.||.|||++++ +||||||+|||++..+      
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-iH~dlkp~Nill~~~~~~~~~~  160 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNL-VHGNVCAKNILLARLGLAEGTS  160 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCc-cCCCCCcccEEEeccCcccCcc
Confidence                                   3333334468999999999999999999999999 9999999999997643      


Q ss_pred             -eEEEeccccchh
Q psy6828         146 -VVKLADFGLTEF  157 (392)
Q Consensus       146 -~~kl~DFGla~~  157 (392)
                       .+|++|||++..
T Consensus       161 ~~~kl~d~g~~~~  173 (274)
T cd05076         161 PFIKLSDPGVSFT  173 (274)
T ss_pred             ceeeecCCccccc
Confidence             489999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0670|consensus

Probab=99.73  E-value=1.5e-17  Score=157.69  Aligned_cols=134  Identities=23%  Similarity=0.323  Sum_probs=107.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+|......|+|=|++|..|.+...|+.||||++..+.. ..+.=+.|+++                           
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            47889999999999999999999999999999999986643 12223344444                           


Q ss_pred             -------------HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhc
Q psy6828          95 -------------DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~  158 (392)
                                   ++++.  .+..|....+..|+.|++.||..|-.+|+ +|.||||.|||++.. ..+||||||.|.+.
T Consensus       509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v-lHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV-LHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe-eecccCccceEeccCcceeeeccCcccccc
Confidence                         33332  12247778899999999999999999999 999999999999876 56899999999877


Q ss_pred             cccccc---------------------cccccceeeeeee
Q psy6828         159 RDAEYT---------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~~~---------------------~~d~~s~g~~~~~  177 (392)
                      ..+..+                     ..|+||.||++||
T Consensus       588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYE  627 (752)
T KOG0670|consen  588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYE  627 (752)
T ss_pred             ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEE
Confidence            665533                     2399999999999

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.73  E-value=1.1e-17  Score=157.58  Aligned_cols=108  Identities=26%  Similarity=0.348  Sum_probs=90.5

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                              
T Consensus         5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (305)
T cd05609           5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVE   84 (305)
T ss_pred             EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCC
Confidence            34679999999999999999999999999876543   234456677666                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                           +++++. ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||+++.
T Consensus        85 g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          85 GGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCchHHEEECCCCCEEEeeCCCccc
Confidence                 333332 358999999999999999999999999 9999999999999999999999998863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.73  E-value=2.4e-18  Score=158.06  Aligned_cols=108  Identities=18%  Similarity=0.239  Sum_probs=86.1

Q ss_pred             CCCCCcceeEEEEEEEeecCc-------EEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGR-------IFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~-------~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      +.||+|+||.||++.+..++.       .||+|.+........+.+..|..+                            
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998765443       489999876554555566666655                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--------EEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--------VKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--------~kl~DFGla~~~  158 (392)
                             +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.        ++++|||++...
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGL-THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence                   4444434368999999999999999999999999 99999999999987754        699999988643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.73  E-value=1.9e-17  Score=153.98  Aligned_cols=111  Identities=22%  Similarity=0.327  Sum_probs=89.4

Q ss_pred             eccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      ...+.||+|+||.||++.....+     +.||+|.+..... .....+.+|+..                          
T Consensus         8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   87 (283)
T cd05048           8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLF   87 (283)
T ss_pred             chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEE
Confidence            34677999999999999876655     6899999975433 344567777765                          


Q ss_pred             ---------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828          95 ---------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus        95 ---------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~  150 (392)
                               +++...               ...+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~L~  166 (283)
T cd05048          88 EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF-VHRDLAARNCLVGEGLTVKIS  166 (283)
T ss_pred             ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccccceEEEcCCCcEEEC
Confidence                     222221               0347888899999999999999999999 999999999999999999999


Q ss_pred             ccccchhc
Q psy6828         151 DFGLTEFK  158 (392)
Q Consensus       151 DFGla~~~  158 (392)
                      |||+++..
T Consensus       167 dfg~~~~~  174 (283)
T cd05048         167 DFGLSRDI  174 (283)
T ss_pred             CCcceeec
Confidence            99998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.73  E-value=3.1e-17  Score=150.74  Aligned_cols=112  Identities=23%  Similarity=0.327  Sum_probs=90.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..+...+.+|+|+||.||++. ...+..+|+|.+..... ..+.+.+|+.+                             
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~-~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA   83 (260)
T ss_pred             cceeEEeEecCccceEEEEEE-ecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence            345567789999999999997 44567899999876543 34567777766                             


Q ss_pred             -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  152 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVI  152 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc-cccccCcceEEEcCCCcEEECCCcceeec
Confidence                 33322 23357888999999999999999999999 99999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.73  E-value=1e-17  Score=154.12  Aligned_cols=112  Identities=19%  Similarity=0.340  Sum_probs=92.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+|+.||+|.++...   ....+.+.+|+.+                            
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   83 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL   83 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence            445677999999999999999899999999886432   2334567777766                            


Q ss_pred             -------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++.   .....+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++++|||++...
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI-MHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE-ecCCcChhhEEECCCCcEEEeccceeeec
Confidence                   2222   122358899999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.1e-17  Score=158.18  Aligned_cols=112  Identities=21%  Similarity=0.221  Sum_probs=93.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||+|.+.+....   ..+.+..|+.+                            
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   82 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY   82 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence            34456799999999999999989999999999876442   34556677665                            


Q ss_pred             -------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus        83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574          83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI-VYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe-eccCCChHHeEEcCCCCEEEeecchhhcc
Confidence                   33332 22368999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=9.2e-18  Score=154.09  Aligned_cols=126  Identities=23%  Similarity=0.321  Sum_probs=96.7

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------------   94 (392)
                      +++|+|+||.||+|.+..+++.||+|.+++....   ....+..|..+                                
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999999999999999999765432   12223333322                                


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---------  161 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---------  161 (392)
                          +++... ..+++..+..++.|++.||.|||+.++ +||||+|+||+++.++.+||+|||+++.....         
T Consensus        82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y  159 (260)
T cd05611          82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGI-IHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDY  159 (260)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCc
Confidence                222222 258999999999999999999999999 99999999999999999999999988753211         


Q ss_pred             ----------ccccccccceeeeeee
Q psy6828         162 ----------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ----------~~~~~d~~s~g~~~~~  177 (392)
                                .....|+||+|+++|+
T Consensus       160 ~~pe~~~~~~~~~~~Dv~slG~il~~  185 (260)
T cd05611         160 LAPETILGVGDDKMSDWWSLGCVIFE  185 (260)
T ss_pred             cChhhhcCCCCcchhhhHHHHHHHHH
Confidence                      0123488888888877

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.73  E-value=1e-17  Score=153.56  Aligned_cols=129  Identities=19%  Similarity=0.251  Sum_probs=103.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.+|.|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+..                             
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (258)
T cd05578           3 ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLL   82 (258)
T ss_pred             eEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCC
Confidence            345679999999999999988999999999976432   345567777665                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                            +++... ..+++..+..++.|+++||.|||++++ +|+||||+||++++++.++|+|||++.......      
T Consensus        83 ~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  160 (258)
T cd05578          83 LGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGI-IHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS  160 (258)
T ss_pred             CCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence                  222222 368999999999999999999999999 999999999999999999999999987543321      


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~  191 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYE  191 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHH
Confidence                            123488888888877

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.73  E-value=5.1e-18  Score=156.13  Aligned_cols=128  Identities=26%  Similarity=0.336  Sum_probs=104.4

Q ss_pred             cCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCC-hhHHHHHHHHHHH-----------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKS-VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-----------------------------   94 (392)
                      .+.||.|+||.||+|...    ..+..|+||.++... ....+.+.+|++.                             
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            346899999999999977    346789999996543 3457788888887                             


Q ss_pred             ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828          95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY----  163 (392)
Q Consensus        95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~----  163 (392)
                            +++... ...+++.+...|+.|++.||.|||++++ +|++|+|+||+++.++.+||+|||++........    
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i-iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~  162 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI-IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND  162 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE-EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence                  555555 4479999999999999999999999999 9999999999999999999999999886521110    


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ..+|+||||+++||
T Consensus       163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e  197 (259)
T PF07714_consen  163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE  197 (259)
T ss_dssp             TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccc
Confidence                                 12399999999998

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG1025|consensus

Probab=99.73  E-value=1.6e-17  Score=164.94  Aligned_cols=130  Identities=24%  Similarity=0.285  Sum_probs=109.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCC-hhHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKS-VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||.|+||+||+|...-.|+    +||||++.... .+..+.+..|..+                           
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~  778 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL  778 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence            346789999999999999876665    68999986543 3445667777665                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~---  164 (392)
                             +|++....++.....+.|..||++||.|||.+.. +||||-..|+|+..-..+|+.|||+++........   
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrl-VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRL-VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcch-hhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence                   7888777789999999999999999999999999 99999999999999999999999999987554321   


Q ss_pred             ----------------------cccccceeeeeee
Q psy6828         165 ----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ----------------------~~d~~s~g~~~~~  177 (392)
                                            ..||||||++.||
T Consensus       858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWE  892 (1177)
T KOG1025|consen  858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWE  892 (1177)
T ss_pred             cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHH
Confidence                                  2399999999999

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.2e-17  Score=153.85  Aligned_cols=111  Identities=24%  Similarity=0.335  Sum_probs=91.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC-----ChhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK-----SVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~~E~~~--------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||+|.+...     .......+.+|+.+                          
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            34466799999999999999999999999987532     12334567777776                          


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                 +++... ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||+++..
T Consensus        84 v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          84 FVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECcccccccc
Confidence                       222222 247889999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.73  E-value=9.2e-18  Score=160.47  Aligned_cols=132  Identities=22%  Similarity=0.289  Sum_probs=102.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||||.+....  ......+.+|+.+                           
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            34666778999999999999999999999999987532  1223344555554                           


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-  161 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-  161 (392)
                                  +++. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...... 
T Consensus        85 ~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  162 (337)
T cd07858          85 YIVYELMDTDLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANV-LHRDLKPSNLLLNANCDLKICDFGLARTTSEKG  162 (337)
T ss_pred             EEEEeCCCCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence                        1111 12368999999999999999999999999 99999999999999999999999998754321 


Q ss_pred             -----------------------ccccccccceeeeeee
Q psy6828         162 -----------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 -----------------------~~~~~d~~s~g~~~~~  177 (392)
                                             .....|+||+|+++|+
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~  201 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE  201 (337)
T ss_pred             ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHH
Confidence                                   0123488888888887

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.73  E-value=1e-17  Score=153.57  Aligned_cols=105  Identities=32%  Similarity=0.472  Sum_probs=88.0

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------------   94 (392)
                      +|+|+||.||++.+..+|+.|++|.+.....   ...+.+.+|+.+                                  
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999988999999999976544   344556666554                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +++.... .+++..+..++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++...
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i-~H~di~~~nil~~~~~~~~l~dfg~~~~~  143 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGI-IHRDLKPDNILIDSNGHLKLTDFGLSKVG  143 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCe-ecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence             2222222 68999999999999999999999999 99999999999999999999999988754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.73  E-value=9.8e-18  Score=155.97  Aligned_cols=111  Identities=21%  Similarity=0.387  Sum_probs=90.1

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME   98 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~   98 (392)
                      ...+.+|+|+||.||++.+..+++.||||.+.....  ...+.+.+|+.+                          +++.
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence            345679999999999999999999999999865432  223456667665                          2221


Q ss_pred             ---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          99 ---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        99 ---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               .....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        83 ~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i-~H~~l~p~nill~~~~~~~l~dfg~~~~~  150 (284)
T cd07860          83 QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLARAF  150 (284)
T ss_pred             cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence                     112358899999999999999999999999 99999999999999999999999988643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.73  E-value=1.2e-17  Score=154.39  Aligned_cols=111  Identities=19%  Similarity=0.259  Sum_probs=91.7

Q ss_pred             eccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------------   94 (392)
                      ...+.+|+|+||.||+|.+...   ...||||...... ....+.+.+|+.+                            
T Consensus         9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~   88 (270)
T cd05056           9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELA   88 (270)
T ss_pred             eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcC
Confidence            3456799999999999987654   3479999987654 3455677888776                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||+++..
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          89 PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF-VHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccChheEEEecCCCeEEccCceeeec
Confidence                  4444333358999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.73  E-value=3.2e-17  Score=152.20  Aligned_cols=113  Identities=23%  Similarity=0.375  Sum_probs=92.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.||+|+||.||+|.+..+|+    .||+|.+.+... .....+.+|+..                          
T Consensus         9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e   88 (279)
T cd05057           9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQ   88 (279)
T ss_pred             cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEe
Confidence            3445789999999999999877665    589999876643 344567777666                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++.+....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++...
T Consensus        89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE-EecccCcceEEEcCCCeEEECCCccccccc
Confidence                    3333334468999999999999999999999999 999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.73  E-value=1.1e-17  Score=158.01  Aligned_cols=129  Identities=23%  Similarity=0.291  Sum_probs=101.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+++                               
T Consensus         4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~   83 (308)
T cd06615           4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   83 (308)
T ss_pred             eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCC
Confidence            345679999999999999999999999999875432 334567778776                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                          +++... ..+++..+..++.|++.||.|||+ .++ +||||||+|||++.++.+||+|||++.......       
T Consensus        84 ~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  161 (308)
T cd06615          84 GSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT  161 (308)
T ss_pred             CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCE-EECCCChHHEEEecCCcEEEccCCCcccccccccccCCCC
Confidence                333322 358999999999999999999997 578 999999999999999999999999887542210       


Q ss_pred             --------------cccccccceeeeeee
Q psy6828         163 --------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------~~~~d~~s~g~~~~~  177 (392)
                                    ....|+||+|+++|+
T Consensus       162 ~~~~aPE~~~~~~~~~~~DiwslG~~l~~  190 (308)
T cd06615         162 RSYMSPERLQGTHYTVQSDIWSLGLSLVE  190 (308)
T ss_pred             cCccChhHhcCCCCCccchHHHHHHHHHH
Confidence                          112478888888777

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.73  E-value=8.1e-18  Score=175.87  Aligned_cols=134  Identities=16%  Similarity=0.219  Sum_probs=103.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||+|.+.....  .....+.+|+.+                          
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI   91 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI   91 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence            3456677889999999999999999999999999875433  344567778777                          


Q ss_pred             -----------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCC-------cccccCCCCCceEEcCC---------
Q psy6828          95 -----------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSA-------LRYHGNLKASNCLVDSR---------  144 (392)
Q Consensus        95 -----------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~-------iiiHrDlKp~NIll~~~---------  144 (392)
                                 +++..   ....+++..++.|+.||+.||.|||+.+       | +||||||+|||++..         
T Consensus        92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~I-VHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERV-LHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCc-eeccCcHHHeEeecCccccccccc
Confidence                       12211   1235899999999999999999999844       7 999999999999642         


Q ss_pred             --------ceEEEeccccchhccccc------------------------cccccccceeeeeee
Q psy6828         145 --------WVVKLADFGLTEFKRDAE------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       145 --------~~~kl~DFGla~~~~~~~------------------------~~~~d~~s~g~~~~~  177 (392)
                              +.+||+|||++.......                        ....|+||||+++|+
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE  235 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE  235 (1021)
T ss_pred             cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence                    348999999987542110                        113499999999998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.73  E-value=7.3e-18  Score=158.69  Aligned_cols=112  Identities=24%  Similarity=0.383  Sum_probs=89.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |.....||+|+||.||++.+..+++.||||.+.....  .....+.+|+.+                             
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   93 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS   93 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence            4556779999999999999999999999998864321  112233445544                             


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                   +++.+....+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++...
T Consensus        94 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865          94 FYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKI-LHRDMKAANILITKDGILKLADFGLARAF  169 (310)
T ss_pred             EEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEECCCCcEEECcCCCcccc
Confidence                         1222223358999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.73  E-value=1.4e-17  Score=151.31  Aligned_cols=113  Identities=27%  Similarity=0.416  Sum_probs=95.6

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------   94 (392)
                      ..+.+|+|++|.||++.+..+++.+++|.++.......+.+.+|+..                                 
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   83 (253)
T cd05122           4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS   83 (253)
T ss_pred             eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence            45679999999999999988999999999987655455677777765                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                        +++......+++..+..++.|++.||.|||++++ +|+||+|+||++++++.++|+|||.+......
T Consensus        84 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          84 LKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE-ecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence              3333332468999999999999999999999999 99999999999999999999999998776543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.73  E-value=6.8e-17  Score=151.06  Aligned_cols=112  Identities=21%  Similarity=0.313  Sum_probs=88.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +.....+|+|+||.||++......     ..+|+|.+..... .....+.+|+.+                         
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   93 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV   93 (293)
T ss_pred             eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence            444567999999999999876433     7899999975432 333456667654                         


Q ss_pred             -----------HHhh---------------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEE
Q psy6828          95 -----------DIME---------------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK  148 (392)
Q Consensus        95 -----------~~l~---------------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~k  148 (392)
                                 ++++               .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|
T Consensus        94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i-vH~dlkp~Nil~~~~~~~k  172 (293)
T cd05053          94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC-IHRDLAARNVLVTEDHVMK  172 (293)
T ss_pred             EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc-cccccceeeEEEcCCCeEE
Confidence                       2221               112358889999999999999999999999 9999999999999999999


Q ss_pred             Eeccccchhc
Q psy6828         149 LADFGLTEFK  158 (392)
Q Consensus       149 l~DFGla~~~  158 (392)
                      |+|||+++..
T Consensus       173 L~Dfg~~~~~  182 (293)
T cd05053         173 IADFGLARDI  182 (293)
T ss_pred             eCcccccccc
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.73  E-value=1.3e-17  Score=153.58  Aligned_cols=111  Identities=22%  Similarity=0.439  Sum_probs=90.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH---------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI---------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~---------------------------   94 (392)
                      ..+.+|+|+||.||.+.+..+++.||+|.+.....      ...+.+.+|+..                           
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e   83 (268)
T cd06630           4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE   83 (268)
T ss_pred             ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence            45679999999999999999999999999975431      234567777766                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~  160 (392)
                              +++.+. ..+++..+..++.|++.||.|||++++ +||||||+||+++.++ .+||+|||++.....
T Consensus        84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i-~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          84 WMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQI-IHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             ccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence                    233222 268899999999999999999999999 9999999999998775 699999999876543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.73  E-value=1.7e-17  Score=162.05  Aligned_cols=55  Identities=31%  Similarity=0.453  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~i-vH~dikp~Nill~~~~~~kL~DfGla~~~  287 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNC-VHRDLAARNVLLAQGKIVKICDFGLARDI  287 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChHhEEEeCCCEEEEEeCCcceec
Confidence            37788889999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG2052|consensus

Probab=99.73  E-value=3.9e-18  Score=159.16  Aligned_cols=108  Identities=21%  Similarity=0.289  Sum_probs=87.4

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+.+|+|.||+||+|.  +.|+.||||++....   ...+.+|.+|                                
T Consensus       214 ~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  214 VLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             EEEEEecCccccceeecc--ccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence            447789999999999996  559999999997553   2345555555                                


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-----CC--cccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHD-----SA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-----~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               |||.+.  .++.+...+++..+++||.|||-     +|  -|.|||||+.|||+.+++.+.|+|+|||-..
T Consensus       289 dYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h  366 (513)
T KOG2052|consen  289 DYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  366 (513)
T ss_pred             ecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence                     555553  58999999999999999999994     22  2599999999999999999999999999765


Q ss_pred             ccc
Q psy6828         159 RDA  161 (392)
Q Consensus       159 ~~~  161 (392)
                      .+.
T Consensus       367 ~~~  369 (513)
T KOG2052|consen  367 DSD  369 (513)
T ss_pred             ccc
Confidence            443

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.73  E-value=6.6e-18  Score=155.03  Aligned_cols=127  Identities=24%  Similarity=0.376  Sum_probs=104.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------------   94 (392)
                      .+.+|+|++|.||++.+..+++.|++|.+..... ...+.+.+|+..                                 
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS   85 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence            4679999999999999999999999999977654 445667777765                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--------  163 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--------  163 (392)
                        +++... ..+++..+..++.|++.|+.|||+ .++ +||||+|+||+++.++.++|+|||++........        
T Consensus        86 L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~-~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~  163 (264)
T cd06623          86 LADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHI-IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGT  163 (264)
T ss_pred             HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCC-ccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeec
Confidence              333332 368999999999999999999999 999 9999999999999999999999998876432211        


Q ss_pred             ---------------ccccccceeeeeee
Q psy6828         164 ---------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------~~~d~~s~g~~~~~  177 (392)
                                     ...|+|+||+++|+
T Consensus       164 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~  192 (264)
T cd06623         164 VTYMSPERIQGESYSYAADIWSLGLTLLE  192 (264)
T ss_pred             ccccCHhhhCCCCCCchhhHHHHHHHHHH
Confidence                           13489999999888

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=1.3e-17  Score=153.09  Aligned_cols=112  Identities=25%  Similarity=0.464  Sum_probs=93.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||.+.+..+++.|++|.++.....  ..+.+.+|+.+                             
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            34457899999999999999889999999999765442  56677777776                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++... ..+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++....
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i-~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          82 SGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGI-VHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             CCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEcccccccccC
Confidence                  333322 248899999999999999999999999 999999999999999999999999887643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.72  E-value=1.2e-17  Score=159.99  Aligned_cols=115  Identities=23%  Similarity=0.411  Sum_probs=92.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------HH-------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------DI-------------   96 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------~~-------------   96 (392)
                      ..+|...+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+.+             +.             
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            4567778889999999999999999999999999976655555556666655             10             


Q ss_pred             --------------hhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccc
Q psy6828          97 --------------MEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLT  155 (392)
Q Consensus        97 --------------l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla  155 (392)
                                    +..      ....+++..+..++.|+++||.|||+.++ +||||||+||+++. ++.+|++|||++
T Consensus        84 ~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vH~dikp~Nili~~~~~~~kl~dfg~~  162 (342)
T cd07854          84 SLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANV-LHRDLKPANVFINTEDLVLKIGDFGLA  162 (342)
T ss_pred             cccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEcCCCceEEECCcccc
Confidence                          000      01258899999999999999999999999 99999999999974 567899999998


Q ss_pred             hhc
Q psy6828         156 EFK  158 (392)
Q Consensus       156 ~~~  158 (392)
                      +..
T Consensus       163 ~~~  165 (342)
T cd07854         163 RIV  165 (342)
T ss_pred             eec
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.72  E-value=1e-17  Score=159.87  Aligned_cols=109  Identities=25%  Similarity=0.363  Sum_probs=87.1

Q ss_pred             ccCCCCCcceeEEEEEEEeec--CcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYK--GRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~--~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..+.||+|+||.||++.+..+  ++.||+|.+....  ....+.+.+|+.+                             
T Consensus         4 ~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~   83 (332)
T cd07857           4 LIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL   83 (332)
T ss_pred             EEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence            345699999999999999887  8999999986431  1123344555544                             


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        84 ~~e~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~gi-vH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          84 YEELMEADLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANV-LHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             EEecccCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence                      1111 12358899999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=1.7e-17  Score=154.56  Aligned_cols=110  Identities=19%  Similarity=0.312  Sum_probs=89.4

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------------   94 (392)
                      ..+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+                                
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (286)
T cd06622           5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAG   84 (286)
T ss_pred             hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCC
Confidence            3567999999999999999899999999886542 2333556667655                                


Q ss_pred             ---HHhhcC--CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMENE--DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~~--~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         .++...  ...+++..+..++.|++.||.|||+ .++ +||||||+||+++.++.+||+|||++...
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          85 SLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI-IHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             CHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCE-eeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence               233322  1268999999999999999999996 588 99999999999999999999999988653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.72  E-value=1e-17  Score=155.57  Aligned_cols=109  Identities=19%  Similarity=0.306  Sum_probs=86.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+++.||+|.+++.... ......+|+..                                
T Consensus         3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~   82 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM   82 (282)
T ss_pred             eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence            345799999999999999999999999998754221 11122344433                                


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++.++..++.|++.||.|||++++ +||||||+||+++. +.+||+|||+++..
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-~H~dl~p~ni~l~~-~~~kl~dfg~~~~~  149 (282)
T cd07831          83 DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI-FHRDIKPENILIKD-DILKLADFGSCRGI  149 (282)
T ss_pred             CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-eecccCHHHEEEcC-CCeEEEeccccccc
Confidence                 2222223358999999999999999999999999 99999999999999 99999999998754

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.72  E-value=8.3e-18  Score=157.33  Aligned_cols=111  Identities=23%  Similarity=0.358  Sum_probs=88.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|.++....  ...+.+.+|+.+                             
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~   82 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY   82 (295)
T ss_pred             ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence            3445679999999999999999999999998865422  123445556554                             


Q ss_pred             -----------HHhhcC----CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchh
Q psy6828          95 -----------DIMENE----DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------~~l~~~----~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~  157 (392)
                                 +++...    ...+++..+..++.||+.||.|||++++ +||||||+||+++. ++.+||+|||+++.
T Consensus        83 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          83 LVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV-MHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCChHHEEEecCCCeEEEeeccccee
Confidence                       111110    2247999999999999999999999999 99999999999998 88999999998874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.72  E-value=1.4e-17  Score=152.30  Aligned_cols=112  Identities=29%  Similarity=0.421  Sum_probs=94.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.+|+|+||.||++.+..+++.|++|.++....  .+.+.+|+.+                              
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            35556779999999999999888899999999975532  5667777776                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                           +++......+++..+..++.|++.||.|||+.++ +|+||+|+||++++++.+||+|||++....
T Consensus        82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i-~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~  150 (256)
T cd06612          82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK-IHRDIKAGNILLNEEGQAKLADFGVSGQLT  150 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcceEEECCCCcEEEcccccchhcc
Confidence                 3343334468999999999999999999999999 999999999999999999999999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.72  E-value=1.1e-17  Score=159.60  Aligned_cols=113  Identities=29%  Similarity=0.463  Sum_probs=90.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+|+.||+|.+.....  .....+.+|+.+                            
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence            34455679999999999999999999999999876422  233445556554                            


Q ss_pred             --HHhh-------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIME-------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~-------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++.       .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        86 v~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          86 VMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV-IHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEecccccceee
Confidence              1111       112358999999999999999999999999 99999999999999999999999998653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.72  E-value=1.3e-17  Score=146.00  Aligned_cols=106  Identities=18%  Similarity=0.153  Sum_probs=81.9

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--H------------------------HHHHHHHHHH---------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--I------------------------TRAMKKELKI---------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~------------------------~~~~~~E~~~---------   94 (392)
                      ..||+|+||.||+|.+. +|+.||||+++.....  .                        .....+|..+         
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            56999999999999986 8999999999654211  0                        0112235443         


Q ss_pred             ---------------HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHH-hcCCcccccCCCCCceEEcCCceEEEe
Q psy6828          95 ---------------DIMEN--------EDVKLDNMFIASLVADILRGMLYL-HDSALRYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus        95 ---------------~~l~~--------~~~~l~~~~~~~i~~qi~~~l~yl-H~~~iiiHrDlKp~NIll~~~~~~kl~  150 (392)
                                     +++..        ....+++..+..++.|++.+|.|+ |+.++ +||||||+|||++ ++.++|+
T Consensus        82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi-iHrDlkP~NIli~-~~~v~Li  159 (190)
T cd05147          82 PCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRL-VHADLSEYNLLYH-DGKLYII  159 (190)
T ss_pred             CCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEE-CCcEEEE
Confidence                           22221        123578889999999999999999 69999 9999999999998 4789999


Q ss_pred             ccccchhc
Q psy6828         151 DFGLTEFK  158 (392)
Q Consensus       151 DFGla~~~  158 (392)
                      |||+|...
T Consensus       160 DFG~a~~~  167 (190)
T cd05147         160 DVSQSVEH  167 (190)
T ss_pred             EccccccC
Confidence            99998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.72  E-value=9e-18  Score=157.08  Aligned_cols=114  Identities=25%  Similarity=0.369  Sum_probs=91.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.+|+|.++.....  ....+.+|+.+                             
T Consensus         7 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e   86 (293)
T cd07843           7 YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVME   86 (293)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEeh
Confidence            34457899999999999999989999999999754321  22234556554                             


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                             +++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++.....
T Consensus        87 ~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          87 YVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI-LHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             hcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence                   2222223358999999999999999999999999 9999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.72  E-value=4.1e-17  Score=148.90  Aligned_cols=108  Identities=21%  Similarity=0.327  Sum_probs=91.0

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH----------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI----------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~----------------------------------   94 (392)
                      +.||+|+||.||++.+.. ++.||+|.+...... ..+.+.+|+.+                                  
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            368999999999999777 999999998765443 45677788776                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                       +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ehhhcCcceEEEcCCCcEEEeecccccccc
Confidence             3343333468889999999999999999999999 999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.72  E-value=1.3e-17  Score=152.62  Aligned_cols=113  Identities=14%  Similarity=0.219  Sum_probs=94.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||.+.+..+++.+++|.+....  ....+.+.+|+.+                             
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            445678999999999999999999999999987543  2445567778776                             


Q ss_pred             ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++... ...+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221          82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI-LHRDIKTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence                  333322 3458999999999999999999999999 999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.72  E-value=2.8e-17  Score=152.50  Aligned_cols=112  Identities=20%  Similarity=0.353  Sum_probs=90.6

Q ss_pred             eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChh-HHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVD-ITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~-~~~~~~~E~~~-------------------------   94 (392)
                      |...+.+|+|+||.||+|.+..     +++.||+|.+...... ..+.+.+|+.+                         
T Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   86 (280)
T cd05049           7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMV   86 (280)
T ss_pred             hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEE
Confidence            3445779999999999998653     3578999999765443 45678888776                         


Q ss_pred             ----------HHhhcC-------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828          95 ----------DIMENE-------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus        95 ----------~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                                +++...             ...+++.++..++.|++.|+.|||++++ +||||||+||+++.++.+||+|
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i-~h~dlkp~nili~~~~~~kl~d  165 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF-VHRDLATRNCLVGYDLVVKIGD  165 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe-eccccccceEEEcCCCeEEECC
Confidence                      222211             1247888999999999999999999999 9999999999999999999999


Q ss_pred             cccchhc
Q psy6828         152 FGLTEFK  158 (392)
Q Consensus       152 FGla~~~  158 (392)
                      ||+++..
T Consensus       166 ~g~~~~~  172 (280)
T cd05049         166 FGMSRDV  172 (280)
T ss_pred             cccceec
Confidence            9998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.72  E-value=1.2e-17  Score=155.39  Aligned_cols=111  Identities=23%  Similarity=0.357  Sum_probs=90.1

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME   98 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~   98 (392)
                      ...+.||+|+||.||+|.+..+++.||+|.+.+...  ...+.+.+|+.+                          +++.
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   83 (286)
T cd07846           4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVD   83 (286)
T ss_pred             eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCC
Confidence            345679999999999999988999999999865432  223456666655                          2221


Q ss_pred             --------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          99 --------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        99 --------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              .....+++.++..++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++...
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~h~~l~p~ni~~~~~~~~~l~dfg~~~~~  150 (286)
T cd07846          84 HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTL  150 (286)
T ss_pred             ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence                    122248999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.72  E-value=1.2e-17  Score=155.20  Aligned_cols=111  Identities=24%  Similarity=0.389  Sum_probs=90.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.||+|++|.||+|.+..+|+.||||.+..... ...+.+.+|+.+                               
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (284)
T cd07836           3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK   82 (284)
T ss_pred             eEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence            345679999999999999999999999999875432 223445566665                               


Q ss_pred             ---HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++....  ..+++..+..++.|++.||.|||++++ +||||||+||++++++.++++|||++...
T Consensus        83 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~h~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836          83 DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV-LHRDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence               2222221  358999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.72  E-value=4.1e-17  Score=152.71  Aligned_cols=113  Identities=20%  Similarity=0.289  Sum_probs=91.0

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecC----------------cEEEEEEcCCCCh-hHHHHHHHHHHH-------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKG----------------RIFAIKRIPKKSV-DITRAMKKELKI-------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~----------------~~vAiK~~~~~~~-~~~~~~~~E~~~-------------   94 (392)
                      .+...+.||+|+||.||++.+..++                ..||+|.+..... ...+.+.+|+.+             
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~   85 (296)
T cd05051           6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL   85 (296)
T ss_pred             hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            4556788999999999999876543                4689999976542 445667778766             


Q ss_pred             ----------------------HHhhcCC----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc
Q psy6828          95 ----------------------DIMENED----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD  142 (392)
Q Consensus        95 ----------------------~~l~~~~----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~  142 (392)
                                            +++....          ..+++..+..++.|++.||.|||++++ +||||||+||+++
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i-~H~dlkp~Nili~  164 (296)
T cd05051          86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF-VHRDLATRNCLVG  164 (296)
T ss_pred             EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc-cccccchhceeec
Confidence                                  2222211          158899999999999999999999999 9999999999999


Q ss_pred             CCceEEEeccccchhc
Q psy6828         143 SRWVVKLADFGLTEFK  158 (392)
Q Consensus       143 ~~~~~kl~DFGla~~~  158 (392)
                      .++.++|+|||+++..
T Consensus       165 ~~~~~~l~dfg~~~~~  180 (296)
T cd05051         165 KNYTIKIADFGMSRNL  180 (296)
T ss_pred             CCCceEEccccceeec
Confidence            9999999999998753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.72  E-value=8.2e-18  Score=160.56  Aligned_cols=116  Identities=23%  Similarity=0.384  Sum_probs=92.7

Q ss_pred             cceeeec-cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH--------------HHHHHHHHHH------------
Q psy6828          42 TSQVSLS-SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI--------------TRAMKKELKI------------   94 (392)
Q Consensus        42 ~~~~~~~-~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--------------~~~~~~E~~~------------   94 (392)
                      .+++|.. .+.||+|+||+||++.+..+++.||||.+.......              ...+.+|+.+            
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            4555654 567999999999999999999999999986543211              1135566655            


Q ss_pred             ----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 ----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 ----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                                            +++.. ...+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+||
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i-~H~dl~~~nill~~~~~~kl~df  163 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYF-MHRDLSPANIFINSKGICKIADF  163 (335)
T ss_pred             eEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccccHHHeEECCCCCEEECCc
Confidence                                  22222 2258999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhcc
Q psy6828         153 GLTEFKR  159 (392)
Q Consensus       153 Gla~~~~  159 (392)
                      |+++...
T Consensus       164 g~~~~~~  170 (335)
T PTZ00024        164 GLARRYG  170 (335)
T ss_pred             cceeecc
Confidence            9987544

>KOG0199|consensus

Probab=99.72  E-value=2.3e-17  Score=161.31  Aligned_cols=133  Identities=20%  Similarity=0.235  Sum_probs=108.3

Q ss_pred             cCCCCCcceeEEEEEEEeecC-c--EEEEEEcCCCChh-HHHHHHHHHHH------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKG-R--IFAIKRIPKKSVD-ITRAMKKELKI------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~-~--~vAiK~~~~~~~~-~~~~~~~E~~~------------------------------   94 (392)
                      .+.||+|+||+|++|.+...+ +  .||||++....+. ....|.+|+.+                              
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl  194 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL  194 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence            567999999999999877643 3  5899999877764 67789999887                              


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-----
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-----  164 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-----  164 (392)
                          +.|.. ....|.-...+.|+.||+.|+.||.+++. |||||...|+|+.....+||+||||.+.+..+...     
T Consensus       195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl-vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p  273 (1039)
T KOG0199|consen  195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL-VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP  273 (1039)
T ss_pred             chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh-hhhhhhhhhheecccceeeeecccceeccCCCCcceEecC
Confidence                22222 33357777889999999999999999999 99999999999999999999999999987554421     


Q ss_pred             ---------------------cccccceeeeeeeccCCC
Q psy6828         165 ---------------------GTDQHSFLQHTYHVNRAG  182 (392)
Q Consensus       165 ---------------------~~d~~s~g~~~~~~~~~~  182 (392)
                                           ..|+|+||+++||.-.|+
T Consensus       274 ~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyG  312 (1039)
T KOG0199|consen  274 QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYG  312 (1039)
T ss_pred             CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccC
Confidence                                 239999999999944333

>KOG0603|consensus

Probab=99.72  E-value=4.3e-18  Score=165.63  Aligned_cols=168  Identities=19%  Similarity=0.128  Sum_probs=117.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------HHhh
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------DIME   98 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------~~l~   98 (392)
                      |.....+|.|+|+.|..+.+..+++.+++|++.+...+..    +|+.+                           +.++
T Consensus       324 y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~----~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~  399 (612)
T KOG0603|consen  324 YEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQ----DEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD  399 (612)
T ss_pred             hccccccCCCCccceeeeeccccccchhheeccccccccc----cccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence            4445569999999999999999999999999987632211    12211                           1111


Q ss_pred             cCC-------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE-cCCceEEEeccccchhccccccc------
Q psy6828          99 NED-------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV-DSRWVVKLADFGLTEFKRDAEYT------  164 (392)
Q Consensus        99 ~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll-~~~~~~kl~DFGla~~~~~~~~~------  164 (392)
                      .+.       .+....++..|++||+.|+.|||++|+ +||||||+|||+ ++.++++|+|||.++..+....+      
T Consensus       400 g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gv-vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~  478 (612)
T KOG0603|consen  400 GGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGV-VHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQ  478 (612)
T ss_pred             ccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCe-eecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhc
Confidence            111       022336777899999999999999999 999999999999 68899999999999877655211      


Q ss_pred             --------------cccccceeeeeee--ccCCCC----cc-------------cccccccchhhhccCCHHHHHHhhcC
Q psy6828         165 --------------GTDQHSFLQHTYH--VNRAGS----TE-------------SLHCKCDEALLFEMLPRSVAEQLRRG  211 (392)
Q Consensus       165 --------------~~d~~s~g~~~~~--~~~~~~----~~-------------~~d~~~~~~lL~~~lp~~v~~~l~~~  211 (392)
                                    ..|+||||+++|+  ....+.    ..             ..-......++.++|..+...|+..+
T Consensus       479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~  558 (612)
T KOG0603|consen  479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGAD  558 (612)
T ss_pred             ccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChh
Confidence                          2399999999999  111111    11             00013456677777777777777655


Q ss_pred             CCccccc
Q psy6828         212 TSVEAES  218 (392)
Q Consensus       212 ~~~~~~~  218 (392)
                      .....++
T Consensus       559 ~i~~h~w  565 (612)
T KOG0603|consen  559 EIGAHPW  565 (612)
T ss_pred             hhccCcc
Confidence            4444443

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.72  E-value=3e-17  Score=151.56  Aligned_cols=106  Identities=15%  Similarity=0.295  Sum_probs=82.4

Q ss_pred             CCCCcceeEEEEEEEee--cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||+||+|....  ....+|+|.+..... .....+.+|+..                                 
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999996443  345789998865432 334456677665                                 


Q ss_pred             --HHhhcCC----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --DIMENED----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --~~l~~~~----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                        +++....    ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~  149 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF-IHSDLALRNCQLTADLSVKIGDYGLALE  149 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE-ecccccHhheEecCCCcEEEeccccccc
Confidence              2222211    124677788999999999999999999 9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.72  E-value=2.5e-17  Score=152.26  Aligned_cols=105  Identities=30%  Similarity=0.430  Sum_probs=84.3

Q ss_pred             CCCCcceeEEEEEEEeecCc--EEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS-VDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||.||++....++.  .+|+|.+.... ....+.+.+|+.+                                 
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            58999999999999887775  46889887532 2344556677665                                 


Q ss_pred             ---HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 ---DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 ---~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                         +++...               ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||++.
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i-~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccccceEEEcCCCeEEECCCCCcc
Confidence               222111               1147888999999999999999999999 999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.72  E-value=2.9e-17  Score=150.91  Aligned_cols=107  Identities=24%  Similarity=0.296  Sum_probs=90.1

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------------   94 (392)
                      ||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                                  
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999999988999999999976432   334567777766                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                       +++.+. ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||+++....
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~-~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGI-IYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence             233222 258999999999999999999999999 9999999999999999999999999886543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.72  E-value=1.8e-17  Score=153.21  Aligned_cols=124  Identities=20%  Similarity=0.280  Sum_probs=95.5

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------HHhhcC
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------DIMENE  100 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------~~l~~~  100 (392)
                      +|+|+||.||++.++.+++.+|+|.+........+....++..                               +++.+.
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~  103 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE  103 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc
Confidence            6999999999999999999999999976543322222222211                               333333


Q ss_pred             CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccccc-----------------
Q psy6828         101 DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAE-----------------  162 (392)
Q Consensus       101 ~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~-----------------  162 (392)
                      . .+++.++..++.|++.||.|||+.++ +||||||+||+++.++ .++++|||+++......                 
T Consensus       104 ~-~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (267)
T PHA03390        104 G-KLSEAEVKKIIRQLVEALNDLHKHNI-IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGH  181 (267)
T ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCC
Confidence            2 79999999999999999999999999 9999999999999998 99999999887543211                 


Q ss_pred             --cccccccceeeeeee
Q psy6828         163 --YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --~~~~d~~s~g~~~~~  177 (392)
                        ....|+||+|+++|+
T Consensus       182 ~~~~~~DvwslG~il~~  198 (267)
T PHA03390        182 NYDVSFDWWAVGVLTYE  198 (267)
T ss_pred             CCCchhhHHHHHHHHHH
Confidence              112377777777776

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.72  E-value=3.7e-17  Score=152.02  Aligned_cols=110  Identities=21%  Similarity=0.336  Sum_probs=90.1

Q ss_pred             ccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ....+|+|+||.||++...     .++..+|+|.+........+.+.+|+.+                            
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   88 (280)
T cd05092           9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY   88 (280)
T ss_pred             eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence            3668999999999999743     3467899999987666666778888777                            


Q ss_pred             -------HHhhcCC--------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 -------DIMENED--------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 -------~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                             +++....              ..+++..+..++.|++.|+.|||++++ +||||||+|||+++++.+||+|||
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i-~H~dlkp~nil~~~~~~~kL~dfg  167 (280)
T cd05092          89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF-VHRDLATRNCLVGQGLVVKIGDFG  167 (280)
T ss_pred             CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe-ecccccHhhEEEcCCCCEEECCCC
Confidence                   2222211              247889999999999999999999999 999999999999999999999999


Q ss_pred             cchhc
Q psy6828         154 LTEFK  158 (392)
Q Consensus       154 la~~~  158 (392)
                      +++..
T Consensus       168 ~~~~~  172 (280)
T cd05092         168 MSRDI  172 (280)
T ss_pred             ceeEc
Confidence            98643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.72  E-value=2e-17  Score=151.29  Aligned_cols=110  Identities=25%  Similarity=0.442  Sum_probs=91.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-----hhHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-----VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.+|+|+||+||+|.+..+++.|++|.+....     ....+.+.+|+..                           
T Consensus         3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (258)
T cd06632           3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE   82 (258)
T ss_pred             cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence            34567999999999999988899999999986543     1244567777665                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              +++.+. ..+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus        83 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~~~ni~~~~~~~~kl~d~~~~~~~  152 (258)
T cd06632          83 LVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNT-VHRDIKGANILVDTNGVVKLADFGMAKQV  152 (258)
T ss_pred             ecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccceec
Confidence                    333322 258899999999999999999999999 99999999999999999999999988754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.71  E-value=1.7e-17  Score=159.07  Aligned_cols=131  Identities=23%  Similarity=0.297  Sum_probs=103.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H-------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------D-------------   95 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~-------------   95 (392)
                      ..|...+.||+|+||.||++.+..+++.||||.+.+...  ...+.+.+|+.+             +             
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence            346667889999999999999999999999999865322  223456666665             0             


Q ss_pred             --------------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          96 --------------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        96 --------------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                    ++.  ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||++......
T Consensus        95 ~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi-~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          95 FYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             EEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence                          111  1258899999999999999999999999 99999999999999999999999998754221


Q ss_pred             c---------------------cccccccceeeeeee
Q psy6828         162 E---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~---------------------~~~~d~~s~g~~~~~  177 (392)
                      .                     ....|+||+|+++|+
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~  208 (343)
T cd07880         172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE  208 (343)
T ss_pred             ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            1                     112488888888887

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.71  E-value=5.3e-17  Score=151.83  Aligned_cols=112  Identities=19%  Similarity=0.366  Sum_probs=91.7

Q ss_pred             eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.||+|+||.||++.+..     ++..+++|.+........+.+.+|+.+                          
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (291)
T cd05094           7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF   86 (291)
T ss_pred             eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence            3445789999999999998543     456799999987766666778888776                          


Q ss_pred             ---------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828          95 ---------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus        95 ---------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~  150 (392)
                               +++...               ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~  165 (291)
T cd05094          87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF-VHRDLATRNCLVGANLLVKIG  165 (291)
T ss_pred             ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccCcceEEEccCCcEEEC
Confidence                     333221               1247889999999999999999999999 999999999999999999999


Q ss_pred             ccccchhc
Q psy6828         151 DFGLTEFK  158 (392)
Q Consensus       151 DFGla~~~  158 (392)
                      |||+++..
T Consensus       166 dfg~a~~~  173 (291)
T cd05094         166 DFGMSRDV  173 (291)
T ss_pred             CCCccccc
Confidence            99998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.71  E-value=2.2e-17  Score=153.26  Aligned_cols=111  Identities=27%  Similarity=0.423  Sum_probs=93.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .|...+.+|+|+||.||.+.+..+++.||+|.+..... ...+.+.+|+.+                             
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            34556789999999999999999999999999875532 345567777765                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++..  .++++.++..++.|++.||.|||+.++ +|+||+|+||+++.++.++++|||++...
T Consensus        85 ~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~i-vH~dl~p~Nil~~~~~~~~l~dfg~~~~~  151 (277)
T cd06640          85 GGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQL  151 (277)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCc-cCcCCChhhEEEcCCCCEEEcccccceec
Confidence                  33332  258899999999999999999999999 99999999999999999999999998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.71  E-value=1.4e-17  Score=159.62  Aligned_cols=133  Identities=23%  Similarity=0.272  Sum_probs=101.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H-------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------D-------------   95 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~-------------   95 (392)
                      ..|.....||+|+||.||+|.+..+|+.||+|.+.+...  .....+.+|+.+             +             
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            345556789999999999999999999999999875422  122345556555             0             


Q ss_pred             ------Hh-----hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---
Q psy6828          96 ------IM-----ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---  161 (392)
Q Consensus        96 ------~l-----~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---  161 (392)
                            ++     ......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....   
T Consensus        95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~  173 (342)
T cd07879          95 FYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGI-IHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG  173 (342)
T ss_pred             EEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCC
Confidence                  00     0011258889999999999999999999999 99999999999999999999999998643211   


Q ss_pred             ------------------ccccccccceeeeeee
Q psy6828         162 ------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------------~~~~~d~~s~g~~~~~  177 (392)
                                        .....|+||+|+++|+
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e  207 (342)
T cd07879         174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE  207 (342)
T ss_pred             ceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence                              0112488888888887

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.71  E-value=1.6e-17  Score=155.06  Aligned_cols=110  Identities=20%  Similarity=0.292  Sum_probs=88.2

Q ss_pred             ccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH--------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI--------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~--------------------------   94 (392)
                      ..+.+|+|+||.||.+.+.   .+|+.||+|.+.....    ...+.+.+|+.+                          
T Consensus         4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (290)
T cd05613           4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI   83 (290)
T ss_pred             eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence            3567999999999999864   4789999999975332    233455666555                          


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                +++... ..+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||+++...
T Consensus        84 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613          84 LDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeEECCCCCEEEeeCccceecc
Confidence                      222222 258899999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.71  E-value=3e-17  Score=151.69  Aligned_cols=110  Identities=21%  Similarity=0.266  Sum_probs=87.3

Q ss_pred             ccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H--------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKSV--DITRAMKKELKI-------------D--------------   95 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~--------------   95 (392)
                      ..+.||+|+||.||++....   +++.||||.+.....  ...+.+.+|+.+             +              
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   82 (273)
T cd05074           3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP   82 (273)
T ss_pred             chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence            34679999999999998654   578999999975432  345567777776             0              


Q ss_pred             -----Hhhc--------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          96 -----IMEN--------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        96 -----~l~~--------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                           +...              ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i-~H~dikp~nili~~~~~~kl~dfg~~~  161 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNF-IHRDLAARNCMLNENMTVCVADFGLSK  161 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccchhhEEEcCCCCEEECcccccc
Confidence                 1100              11136788899999999999999999999 999999999999999999999999987


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       162 ~~  163 (273)
T cd05074         162 KI  163 (273)
T ss_pred             cc
Confidence            54

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.71  E-value=4.5e-17  Score=152.62  Aligned_cols=113  Identities=22%  Similarity=0.322  Sum_probs=89.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecC--------------cEEEEEEcCCCC-hhHHHHHHHHHHH---------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKG--------------RIFAIKRIPKKS-VDITRAMKKELKI---------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~--------------~~vAiK~~~~~~-~~~~~~~~~E~~~---------------   94 (392)
                      .|...+.||+|+||.||++.+..++              ..||+|.++... ....+.+.+|+.+               
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   85 (295)
T cd05097           6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV   85 (295)
T ss_pred             hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence            4555678999999999999875432              359999997653 2345568888777               


Q ss_pred             -----------HHhhc---------CC-----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 -----------DIMEN---------ED-----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 -----------~~l~~---------~~-----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                 +++..         ..           ..+++..+..++.|++.||.|||++++ +||||||+||++++
T Consensus        86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~Nill~~  164 (295)
T cd05097          86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF-VHRDLATRNCLVGN  164 (295)
T ss_pred             EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe-eccccChhhEEEcC
Confidence                       22211         11           136788889999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhc
Q psy6828         144 RWVVKLADFGLTEFK  158 (392)
Q Consensus       144 ~~~~kl~DFGla~~~  158 (392)
                      ++.+||+|||++...
T Consensus       165 ~~~~kl~dfg~~~~~  179 (295)
T cd05097         165 HYTIKIADFGMSRNL  179 (295)
T ss_pred             CCcEEeccccccccc
Confidence            999999999998754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.71  E-value=1.8e-17  Score=152.44  Aligned_cols=128  Identities=23%  Similarity=0.345  Sum_probs=103.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------------   94 (392)
                      .+.+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+                                 
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGS   85 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCc
Confidence            4579999999999999999999999999876543 344567777665                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------  162 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------  162 (392)
                        +++......+++..+..++.|++.||.|||+ .++ +|+||||+||++++++.++|+|||++.......         
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i-~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  164 (265)
T cd06605          86 LDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI-IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSS  164 (265)
T ss_pred             HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe-ecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChh
Confidence              3333333478999999999999999999999 999 999999999999999999999999987542111         


Q ss_pred             ------------cccccccceeeeeee
Q psy6828         163 ------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------~~~~d~~s~g~~~~~  177 (392)
                                  ....|+||+|+++|+
T Consensus       165 y~~PE~~~~~~~~~~~Dv~slG~~l~~  191 (265)
T cd06605         165 YMAPERIQGNDYSVKSDIWSLGLSLIE  191 (265)
T ss_pred             ccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence                        112488888888877

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.71  E-value=2.4e-17  Score=153.82  Aligned_cols=109  Identities=21%  Similarity=0.315  Sum_probs=91.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      .....||+|++|.||++.+..+++.+++|.+........+.+.+|+.+                                
T Consensus        22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            345679999999999999988999999999875544445567777665                                


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++..  ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.++++|||++...
T Consensus       102 ~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~d~g~~~~~  165 (285)
T cd06648         102 ALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGV-IHRDIKSDSILLTSDGRVKLSDFGFCAQV  165 (285)
T ss_pred             CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCChhhEEEcCCCcEEEcccccchhh
Confidence               23322  258889999999999999999999999 99999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.71  E-value=5e-17  Score=152.96  Aligned_cols=114  Identities=21%  Similarity=0.283  Sum_probs=88.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEe-------ecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGI-------YKGRIFAIKRIPKKS-VDITRAMKKELKI----------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------   94 (392)
                      .+...+.||+|+||.||.+...       .++..||+|.+.... ....+.+.+|+.+                      
T Consensus        16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   95 (304)
T cd05101          16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   95 (304)
T ss_pred             HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence            3455688999999999999753       234579999987542 2334556666555                      


Q ss_pred             --------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828          95 --------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW  145 (392)
Q Consensus        95 --------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~  145 (392)
                                    +++...               ...+++..+..++.|++.||.|||++++ +||||||+||+++.++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi-vH~dlkp~Nili~~~~  174 (304)
T cd05101          96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC-IHRDLAARNVLVTENN  174 (304)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe-eecccccceEEEcCCC
Confidence                          233221               1247778889999999999999999999 9999999999999999


Q ss_pred             eEEEeccccchhcc
Q psy6828         146 VVKLADFGLTEFKR  159 (392)
Q Consensus       146 ~~kl~DFGla~~~~  159 (392)
                      .+||+|||+++...
T Consensus       175 ~~kl~D~g~~~~~~  188 (304)
T cd05101         175 VMKIADFGLARDVN  188 (304)
T ss_pred             cEEECCCccceecc
Confidence            99999999987553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.71  E-value=1.5e-17  Score=156.66  Aligned_cols=113  Identities=29%  Similarity=0.475  Sum_probs=89.6

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-------------H--------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------D--------------   95 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------~--------------   95 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+......  ....+.+|+.+             +              
T Consensus         9 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   88 (311)
T cd07866           9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRG   88 (311)
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCc
Confidence            355567799999999999999999999999988543221  11233444444             1              


Q ss_pred             ---------------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          96 ---------------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        96 ---------------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                     .+......+++..+..++.|+++||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus        89 ~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          89 SVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHI-LHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             eEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECcCccchhc
Confidence                           111223368999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=2.2e-17  Score=152.86  Aligned_cols=111  Identities=27%  Similarity=0.423  Sum_probs=92.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.+|.|+||.||++.+..+++.||+|.+.... ......+.+|+.+                              
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG   82 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence            334567999999999999999999999999987553 2344556777665                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                           +++...  .+++..+..++.|++.|+.|||++++ +|+||+|+||++++++.++|+|||+++...
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  149 (274)
T cd06609          83 GGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLT  149 (274)
T ss_pred             CCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEcccccceeec
Confidence                 222222  68999999999999999999999999 999999999999999999999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.71  E-value=1.5e-17  Score=154.24  Aligned_cols=112  Identities=25%  Similarity=0.411  Sum_probs=91.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhc
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMEN   99 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~   99 (392)
                      ...+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+                          +++..
T Consensus         7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06642           7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGG   86 (277)
T ss_pred             HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCC
Confidence            345669999999999999988999999999875432 344567777766                          12211


Q ss_pred             -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             ....+++..+..++.|++.|+.|||++++ +|+||+|+||++++++.++++|||++....
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-vH~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06642          87 GSALDLLKPGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe-eccCCChheEEEeCCCCEEEcccccccccc
Confidence                   11258899999999999999999999999 999999999999999999999999987543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.71  E-value=3.1e-17  Score=153.47  Aligned_cols=112  Identities=24%  Similarity=0.390  Sum_probs=88.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HH-
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DI-   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~-   96 (392)
                      |...+.||+|++|.||++.+..+|+.||+|.+.....  ...+.+.+|+.+                          ++ 
T Consensus         4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            3445679999999999999999999999999865432  223456667665                          12 


Q ss_pred             -------h-hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhc
Q psy6828          97 -------M-ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFK  158 (392)
Q Consensus        97 -------l-~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~  158 (392)
                             + ......+++..+..++.||+.||.|||++++ +||||||+||+++. ++.+||+|||++...
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV-LHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCcceEEEECCCCEEEEccccccccc
Confidence                   1 1122246788889999999999999999999 99999999999985 467999999998753

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.71  E-value=5.4e-17  Score=151.04  Aligned_cols=109  Identities=20%  Similarity=0.278  Sum_probs=87.3

Q ss_pred             cCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .+.||+|+||.||+|...    .+++.||+|.+..... .....+.+|+.+                             
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   89 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL   89 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence            467999999999999853    3557899999975433 334567777766                             


Q ss_pred             ------HHhhcC----------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 ------DIMENE----------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 ------~~l~~~----------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                            +++...                ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+||
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~nili~~~~~~kl~df  168 (283)
T cd05090          90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDL  168 (283)
T ss_pred             CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe-ehhccccceEEEcCCCcEEeccc
Confidence                  222110                1247888899999999999999999999 99999999999999999999999


Q ss_pred             ccchhc
Q psy6828         153 GLTEFK  158 (392)
Q Consensus       153 Gla~~~  158 (392)
                      |+++..
T Consensus       169 g~~~~~  174 (283)
T cd05090         169 GLSREI  174 (283)
T ss_pred             cccccc
Confidence            999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.2e-17  Score=149.46  Aligned_cols=111  Identities=25%  Similarity=0.458  Sum_probs=94.3

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ....+|+|++|.||++.+..+++.|++|.+.....  ...+.+.+|+++                               
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (254)
T cd06627           4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN   83 (254)
T ss_pred             eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence            35679999999999999998999999999987655  455667777776                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                          +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  151 (254)
T cd06627          84 GSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGV-IHRDIKAANILTTKDGVVKLADFGVATKLND  151 (254)
T ss_pred             CcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence                223222 368999999999999999999999999 9999999999999999999999999886543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=6.5e-17  Score=148.55  Aligned_cols=111  Identities=24%  Similarity=0.346  Sum_probs=91.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.+|+|+||.||.+.+..+++.||+|.+.....     .....+.+|+.+                          
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            3446789999999999999999999999999865432     233456777766                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++... ..+++..+..++.|++.||.|||+.++ +||||||+||++++++.++|+|||+++..
T Consensus        84 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          84 EYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccceec
Confidence                     222222 257888999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG4645|consensus

Probab=99.71  E-value=1.6e-17  Score=172.11  Aligned_cols=113  Identities=22%  Similarity=0.419  Sum_probs=91.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhhcC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIMENE  100 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~~~  100 (392)
                      ...+|.|.||.||.|.+..+|+..|+|.+.-...  .....+..|..+                          +|++.+
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            5679999999999999999999999998853321  222334445444                          444443


Q ss_pred             Cc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828         101 DV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus       101 ~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                      .+        ..++.....+..|++.|+.|||++|| |||||||+||+|+.+|.+|++|||.|..+....
T Consensus      1320 sLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gI-VHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGI-VHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             cHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCc-eecCCCccceeeecCCcEEeecccceeEecCch
Confidence            22        47777888999999999999999999 999999999999999999999999998776554

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.71  E-value=1.1e-16  Score=148.17  Aligned_cols=112  Identities=20%  Similarity=0.237  Sum_probs=88.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +...+.+|+|+||.||++.....+     ..||+|.+..... .....+.+|+.+                         
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v   87 (277)
T cd05032           8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVV   87 (277)
T ss_pred             eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEE
Confidence            344567999999999999876543     7899999875532 334556677665                         


Q ss_pred             ----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 ----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 ----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                                +++...         ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~di~p~nill~~~~~~kl~dfg~~  166 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF-VHRDLAARNCMVAEDLTVKIGDFGMT  166 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccChheEEEcCCCCEEECCcccc
Confidence                      222110         1136778899999999999999999999 99999999999999999999999998


Q ss_pred             hhc
Q psy6828         156 EFK  158 (392)
Q Consensus       156 ~~~  158 (392)
                      +..
T Consensus       167 ~~~  169 (277)
T cd05032         167 RDI  169 (277)
T ss_pred             hhh
Confidence            754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.71  E-value=2.4e-17  Score=154.76  Aligned_cols=112  Identities=24%  Similarity=0.403  Sum_probs=89.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||+|.+..+++.||+|.++....  .....+.+|+.+                             
T Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~   88 (302)
T cd07864           9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK   88 (302)
T ss_pred             hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence            4446679999999999999999999999999964321  122334455444                             


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                     .++.+....+++.++..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++...
T Consensus        89 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~  166 (302)
T cd07864          89 GAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF-LHRDIKCSNILLNNKGQIKLADFGLARLY  166 (302)
T ss_pred             CcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCcEEeCcccccccc
Confidence                           1111122358999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.71  E-value=2.7e-17  Score=154.06  Aligned_cols=114  Identities=20%  Similarity=0.310  Sum_probs=92.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM   97 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l   97 (392)
                      ..|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+                          +++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            345556789999999999999888999999999875544445667777665                          122


Q ss_pred             hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      ...       ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi-~H~dL~p~Nili~~~~~~kL~dfg~~~~~  165 (293)
T cd06647          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCE-eeccCCHHHEEEcCCCCEEEccCcceecc
Confidence            111       1247888999999999999999999999 99999999999999999999999987644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.70  E-value=5.2e-17  Score=153.65  Aligned_cols=112  Identities=25%  Similarity=0.390  Sum_probs=92.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      ++.....+|+|+||.||+|.+..+++.|++|.+.....   .....+.+|+.+                           
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  101 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME  101 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence            35556679999999999999999999999999875432   333456667666                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                             +++......+++.++..++.|++.|+.|||++++ +|+||||+||+++.++.+||+|||++..
T Consensus       102 ~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-~H~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633         102 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCChhhEEECCCCCEEEeecCCCcc
Confidence                   2333334468999999999999999999999999 9999999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG4278|consensus

Probab=99.70  E-value=1.7e-17  Score=160.27  Aligned_cols=161  Identities=22%  Similarity=0.334  Sum_probs=121.4

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      ...||-|.||.||.|+++.-.-.||||.++...+. .++|+.|..+                                  
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL  350 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL  350 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence            67899999999999999998999999999766543 4556666655                                  


Q ss_pred             -HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccc-------
Q psy6828          95 -DIMENEDV-KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTG-------  165 (392)
Q Consensus        95 -~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~-------  165 (392)
                       +|++..+. .++.-..+.++.||.+|+.||..++. |||||...|+|+.++..+|++|||++++++.+.++.       
T Consensus       351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF-IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP  429 (1157)
T KOG4278|consen  351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP  429 (1157)
T ss_pred             HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence             55555443 25666677889999999999999999 999999999999999999999999999998877642       


Q ss_pred             -----------------ccccceeeeeeeccCCCC--cccccccccchhhhc--------cCCHHHHHHhhcC
Q psy6828         166 -----------------TDQHSFLQHTYHVNRAGS--TESLHCKCDEALLFE--------MLPRSVAEQLRRG  211 (392)
Q Consensus       166 -----------------~d~~s~g~~~~~~~~~~~--~~~~d~~~~~~lL~~--------~lp~~v~~~l~~~  211 (392)
                                       .|+|+||+++||.-.|+.  ...+|..+.-.+|..        -.|+.+.+.++..
T Consensus       430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraC  502 (1157)
T KOG4278|consen  430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRAC  502 (1157)
T ss_pred             ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence                             299999999999333222  222333333333322        2366666666554

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.70  E-value=2.8e-17  Score=156.48  Aligned_cols=113  Identities=28%  Similarity=0.420  Sum_probs=92.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||||.+....  ....+.+.+|+.+                             
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            345678999999999999998889999999997643  2334456666554                             


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++.....
T Consensus        82 v~e~~~~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi-~H~dlkp~nili~~~~~~~L~dfg~~~~~~~  155 (330)
T cd07834          82 VTELMETDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANV-IHRDLKPSNILVNSNCDLKICDFGLARGVDP  155 (330)
T ss_pred             EecchhhhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence                      122222 268899999999999999999999999 9999999999999999999999999886543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.70  E-value=3.1e-17  Score=150.14  Aligned_cols=107  Identities=24%  Similarity=0.371  Sum_probs=87.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.+|+|+||.||++.  .+++.||+|.++...  ..+.+.+|+.+                               
T Consensus         8 ~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~   83 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG   83 (254)
T ss_pred             ceeeeeeccCCCCceEecc--cCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence            4556789999999999985  578899999986542  23456677666                               


Q ss_pred             ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                         +++... ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++..
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~H~dl~p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083          84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL-VHRDLAARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccCcceEEEcCCCcEEECCCcccee
Confidence               333322 2257899999999999999999999999 9999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.70  E-value=6.3e-17  Score=150.10  Aligned_cols=113  Identities=20%  Similarity=0.301  Sum_probs=88.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKS-VDITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------   94 (392)
                      .+...+.+|+|+||.||.+.+.     .++..||+|.+.... ......+.+|+.+                        
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l   86 (277)
T cd05062           7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV   86 (277)
T ss_pred             HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence            3555678999999999999764     235689999986543 2344557777766                        


Q ss_pred             -----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 -----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 -----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                 +++...         ...+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||+
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062          87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCcchheEEEcCCCCEEECCCCC
Confidence                       222221         1135677889999999999999999999 9999999999999999999999999


Q ss_pred             chhc
Q psy6828         155 TEFK  158 (392)
Q Consensus       155 a~~~  158 (392)
                      ++..
T Consensus       166 ~~~~  169 (277)
T cd05062         166 TRDI  169 (277)
T ss_pred             cccc
Confidence            8643

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.70  E-value=7.4e-17  Score=149.10  Aligned_cols=111  Identities=22%  Similarity=0.486  Sum_probs=90.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----------hHHHHHHHHHHH---------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----------DITRAMKKELKI---------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~E~~~---------------------   94 (392)
                      |...+.||+|+||.||+|.+..+|+.||+|.+.....          ...+.+.+|+.+                     
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            4556789999999999999988999999998853211          123456667655                     


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                    +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||+++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGI-LHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCe-eecCCChhhEEEcCCCeEEEeeccccccc
Confidence                          222222 368999999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.70  E-value=3.1e-17  Score=154.77  Aligned_cols=132  Identities=23%  Similarity=0.315  Sum_probs=103.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.+|+|+||.||++.+..+++.+|+|.+.....   ...+.+.+|+.+                           
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            34556789999999999999999999999999864322   334456677665                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc------
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA------  161 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~------  161 (392)
                             +++......+++.++..++.|++.|+.|||++++ +||||||+||+++.++.+|++|||++......      
T Consensus        96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (308)
T cd06634          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT  174 (308)
T ss_pred             ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHhEEECCCCcEEECCcccceeecCcccccCC
Confidence                   2222233368999999999999999999999999 99999999999999999999999987753221      


Q ss_pred             ----------------ccccccccceeeeeee
Q psy6828         162 ----------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ----------------~~~~~d~~s~g~~~~~  177 (392)
                                      .....|+||+|+++|+
T Consensus       175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  206 (308)
T cd06634         175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  206 (308)
T ss_pred             ccccCHHHHhhcccCCCCcccchHHHHHHHHH
Confidence                            1123488888888877

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.70  E-value=4.2e-17  Score=150.94  Aligned_cols=111  Identities=20%  Similarity=0.277  Sum_probs=90.2

Q ss_pred             eccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------   94 (392)
                      .....+|+|+||.||++..+.+     .+.|++|.+...... ..+.+.+|+.+                          
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   87 (275)
T cd05046           8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMIL   87 (275)
T ss_pred             eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEE
Confidence            3456799999999999996543     467999998765443 45667788776                          


Q ss_pred             ---------HHhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------DIMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------~~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                               +++....        ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||+++.
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i-~H~dlkp~Nili~~~~~~~l~~~~~~~~  166 (275)
T cd05046          88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF-VHRDLAARNCLVSSQREVKVSLLSLSKD  166 (275)
T ss_pred             EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc-ccCcCccceEEEeCCCcEEEcccccccc
Confidence                     3333221        148999999999999999999999999 9999999999999999999999999864


Q ss_pred             c
Q psy6828         158 K  158 (392)
Q Consensus       158 ~  158 (392)
                      .
T Consensus       167 ~  167 (275)
T cd05046         167 V  167 (275)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.70  E-value=5e-17  Score=149.64  Aligned_cols=109  Identities=19%  Similarity=0.378  Sum_probs=88.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH--------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI--------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~--------------------------   94 (392)
                      ...+.+|+|+||.||++.. .+++.+|+|.+.....      .....+.+|+.+                          
T Consensus         3 ~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           3 TKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             cccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            3456799999999999974 5789999998864321      223456677666                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++.+. ..+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++...
T Consensus        82 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          82 EFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCV-VHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence                     233322 258999999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.70  E-value=4.2e-17  Score=152.77  Aligned_cols=109  Identities=18%  Similarity=0.291  Sum_probs=90.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhc---
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMEN---   99 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~---   99 (392)
                      ...+|+|+||.||++....+++.||||.+........+.+.+|+.+                          +++..   
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            3469999999999999999999999999876554555667777765                          11111   


Q ss_pred             ----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         100 ----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       100 ----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus       105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~gi-vH~dl~p~Nilv~~~~~~~l~dfg~~~~~  166 (292)
T cd06657         105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQV  166 (292)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEcccccceec
Confidence                11257999999999999999999999999 99999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.70  E-value=3.9e-17  Score=149.27  Aligned_cols=113  Identities=22%  Similarity=0.327  Sum_probs=91.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.+|+|.+.....  ...+.+.+|+.+                             
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            3445679999999999999999999999999976543  344567777666                             


Q ss_pred             ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhcc
Q psy6828          95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~  159 (392)
                            +++... ...+++..+..++.|++.+|.|||++++ +|+||||+||+++.+ +.+|++|||++....
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI-LHRDLKTQNILLDKHKMVVKIGDFGISKILS  153 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence                  233221 2348999999999999999999999999 999999999999865 468999999987554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.70  E-value=3.2e-17  Score=152.35  Aligned_cols=110  Identities=25%  Similarity=0.466  Sum_probs=90.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------------   94 (392)
                      .+.+|+|+||.||++.+..+++.||+|.+....  ......+.+|+.+                                
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD   83 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence            456899999999999999899999999998653  2233445566654                                


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                          +++......+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++....
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~-~h~dl~p~nil~~~~~~~~l~d~g~~~~~~  151 (287)
T cd07840          84 HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI-LHRDIKGSNILINNDGVLKLADFGLARPYT  151 (287)
T ss_pred             ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCcHHHeEEcCCCCEEEccccceeecc
Confidence                1222222368999999999999999999999999 999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.70  E-value=3.8e-17  Score=149.87  Aligned_cols=112  Identities=21%  Similarity=0.331  Sum_probs=91.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------HH-
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------DI-   96 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------~~-   96 (392)
                      ..+.+|.|+||.||++.+..+++.||+|.+.....  ...+.+.+|+.+                            ++ 
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~   83 (265)
T cd08217           4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC   83 (265)
T ss_pred             eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence            34679999999999999999999999999875433  334556677665                            22 


Q ss_pred             --------hhc---CCcCCCHHHHHHHHHHHHHHHHHHh-----cCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          97 --------MEN---EDVKLDNMFIASLVADILRGMLYLH-----DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        97 --------l~~---~~~~l~~~~~~~i~~qi~~~l~ylH-----~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                              +..   ....+++..+..++.|++.||.|||     +.++ +|+||||+||+++.++.+|++|||++.....
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i-~h~dl~p~nili~~~~~~kl~d~g~~~~~~~  162 (265)
T cd08217          84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTV-LHRDLKPANIFLDANNNVKLGDFGLAKILGH  162 (265)
T ss_pred             cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcc-eecCCCHHHEEEecCCCEEEecccccccccC
Confidence                    211   1336889999999999999999999     8889 9999999999999999999999999887543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.70  E-value=9.4e-17  Score=151.38  Aligned_cols=114  Identities=22%  Similarity=0.279  Sum_probs=89.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKS-VDITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------   94 (392)
                      ..|...+.||+|+||.||++.+..       +...+|+|.+.... ......+.+|+.+                     
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            456778899999999999998643       23579999997542 2334456666654                     


Q ss_pred             ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                     +++...               ...+++.++..++.|++.||.|||++++ +||||||+||+++.+
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi-~H~dlkp~Nill~~~  176 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTED  176 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc-ccccccHHheEEcCC
Confidence                           233221               1247888999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhc
Q psy6828         145 WVVKLADFGLTEFK  158 (392)
Q Consensus       145 ~~~kl~DFGla~~~  158 (392)
                      +.+||+|||+++..
T Consensus       177 ~~~kL~dfg~a~~~  190 (307)
T cd05098         177 NVMKIADFGLARDI  190 (307)
T ss_pred             CcEEECCCcccccc
Confidence            99999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.70  E-value=5.9e-17  Score=148.31  Aligned_cols=107  Identities=27%  Similarity=0.449  Sum_probs=88.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.+|+|+||.||++.+. +++.+|+|.+...... ...+.+|+.+                                  
T Consensus         9 ~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L   86 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCL   86 (256)
T ss_pred             EeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC-HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcH
Confidence            467999999999999864 4778999998765443 2346667666                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +++......+++..+..++.|++.|+.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  150 (256)
T cd05112          87 SDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV-IHRDLAARNCLVGENQVVKVSDFGMTRFV  150 (256)
T ss_pred             HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccccceEEEcCCCeEEECCCcceeec
Confidence             3444444468999999999999999999999999 99999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=5e-17  Score=150.75  Aligned_cols=109  Identities=27%  Similarity=0.437  Sum_probs=90.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+|+|+||.||+|.+..+++.||+|.+....  ....+.+.+|+.+                                
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~   83 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMD   83 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCcC
Confidence            456899999999999999999999999998653  2223445555554                                


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++......+++..+..++.|++.||.|||+.++ +||||+|+||++++++.+||+|||+++..
T Consensus        84 l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~~l~~~ni~~~~~~~~~l~d~g~~~~~  148 (282)
T cd07829          84 LKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRI-LHRDLKPQNILINRDGVLKLADFGLARAF  148 (282)
T ss_pred             HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChheEEEcCCCCEEEecCCccccc
Confidence              3333332468999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.70  E-value=5.1e-17  Score=151.08  Aligned_cols=110  Identities=26%  Similarity=0.412  Sum_probs=86.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+++.||+|.+.....  .....+.+|+.+                               
T Consensus         3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~   82 (287)
T cd07838           3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT   82 (287)
T ss_pred             EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence            34568999999999999988899999999974322  112233344332                               


Q ss_pred             -----------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                 +++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus        83 l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i-~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          83 LVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI-VHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             EEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCChhhEEEccCCCEEEeccCcceec
Confidence                       11222 12258999999999999999999999999 99999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.69  E-value=1e-16  Score=146.30  Aligned_cols=111  Identities=18%  Similarity=0.319  Sum_probs=92.9

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ..+.+|+|+||.||++.+..+++.||+|.+.....  ...+.+.+|++.                               
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~   83 (258)
T cd08215           4 IIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG   83 (258)
T ss_pred             EEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence            45679999999999999998999999999976543  445566777665                               


Q ss_pred             ----HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                          +++...   ...+++.++..++.|++.||.|||++++ +|+||+|+||+++.++.++|+|||++....
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  154 (258)
T cd08215          84 GDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI-LHRDIKPQNIFLTSNGLVKLGDFGISKVLS  154 (258)
T ss_pred             CcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE-ecccCChHHeEEcCCCcEEECCccceeecc
Confidence                333322   2468999999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.69  E-value=1e-16  Score=146.51  Aligned_cols=110  Identities=25%  Similarity=0.356  Sum_probs=91.6

Q ss_pred             cCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCChh-HHHHHHHHHHH-----------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSVD-ITRAMKKELKI-----------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~~-~~~~~~~E~~~-----------------------------   94 (392)
                      .+.+|.|+||.||++.+..++    ..||+|.+...... ..+.+.+|+..                             
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~   83 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM   83 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence            467999999999999988766    89999999765443 55677777666                             


Q ss_pred             ------HHhhcCCcC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++...... +++..+..++.|++.||.|||++++ +||||||+||++++++.++|+|||++....
T Consensus        84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~-~h~dl~~~nil~~~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       84 EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF-IHRDLAARNCLVGENLVVKISDFGLSRDLY  154 (258)
T ss_pred             CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe-eecccccceEEEccCCeEEEcccCCceecc
Confidence                  223222222 8999999999999999999999999 999999999999999999999999987554

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.69  E-value=4.5e-17  Score=152.69  Aligned_cols=111  Identities=17%  Similarity=0.313  Sum_probs=87.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      .....+|+|+||.||++.+..+++.||||.+++... .....+..|+..                               
T Consensus        18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   97 (296)
T cd06618          18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS   97 (296)
T ss_pred             eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence            446679999999999999988899999999975432 223334444432                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                          .++......+++..+..++.|++.||.|||+ .++ +||||+|+||++++++.+||+|||++...
T Consensus        98 ~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i-~H~dl~p~nill~~~~~~kL~dfg~~~~~  165 (296)
T cd06618          98 TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV-IHRDVKPSNILLDASGNVKLCDFGISGRL  165 (296)
T ss_pred             cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE-ecCCCcHHHEEEcCCCCEEECccccchhc
Confidence                1111122358899999999999999999997 588 99999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.69  E-value=1.2e-16  Score=147.48  Aligned_cols=107  Identities=19%  Similarity=0.302  Sum_probs=83.8

Q ss_pred             CCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------   94 (392)
                      +.||+|+||.||+|...  .++..+|+|.++.... .....+.+|+.+                                
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            36899999999999754  3456899999876542 333456777666                                


Q ss_pred             ---HHhhc----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---DIMEN----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---~~l~~----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                         +++..    ....+++..+..++.|++.|+.|||+.++ +||||||+||+++.++.+||+|||+++.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~H~dlkp~nil~~~~~~~kL~dfg~~~~  149 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF-IHSDLALRNCLLTADLTVKIGDYGLSHN  149 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE-eccccCcceEEEcCCCcEEECCcccccc
Confidence               22221    11235667788899999999999999999 9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.69  E-value=3.9e-17  Score=151.55  Aligned_cols=111  Identities=29%  Similarity=0.434  Sum_probs=91.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+..                             
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            34456779999999999999888999999999865432 334556667666                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.+  ..+++..+..++.|++.++.|||++++ +|+||||+||+++.++.++++|||++...
T Consensus        85 ~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~  151 (277)
T cd06641          85 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQL  151 (277)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCe-ecCCCCHHhEEECCCCCEEEeecccceec
Confidence                  22222  258999999999999999999999999 99999999999999999999999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.69  E-value=9.3e-17  Score=140.76  Aligned_cols=109  Identities=17%  Similarity=0.186  Sum_probs=84.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------------------------HHHHHHHHHHH--------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------------------------ITRAMKKELKI--------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------------------------~~~~~~~E~~~--------   94 (392)
                      .++||+|+||.||+|.+. +|+.||||+++.....                          ......+|...        
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            357999999999999977 8999999998764210                          01112334442        


Q ss_pred             ----------------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEE
Q psy6828          95 ----------------DIMENE--------DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKL  149 (392)
Q Consensus        95 ----------------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl  149 (392)
                                      +++...        ...++..++..++.|++.++.++|+ +|+ +||||||+|||++ ++.++|
T Consensus        81 i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~gi-vHrDlkP~NIll~-~~~~~l  158 (190)
T cd05145          81 VPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGL-VHGDLSEYNILYH-DGKPYI  158 (190)
T ss_pred             CCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCE-ecCCCChhhEEEE-CCCEEE
Confidence                            222211        1246778899999999999999999 999 9999999999998 889999


Q ss_pred             eccccchhccc
Q psy6828         150 ADFGLTEFKRD  160 (392)
Q Consensus       150 ~DFGla~~~~~  160 (392)
                      +|||++.....
T Consensus       159 iDFG~a~~~~~  169 (190)
T cd05145         159 IDVSQAVELDH  169 (190)
T ss_pred             EEcccceecCC
Confidence            99999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.69  E-value=2.9e-16  Score=146.75  Aligned_cols=129  Identities=22%  Similarity=0.293  Sum_probs=98.4

Q ss_pred             ccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ..+.+|+|+||.||+|.+..     ....+|+|.+..... ...+.+.+|+.+                           
T Consensus         4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (290)
T cd05045           4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE   83 (290)
T ss_pred             ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence            35679999999999998653     235799999876543 344567778766                           


Q ss_pred             --------HHhhc-----------------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 --------DIMEN-----------------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 --------~~l~~-----------------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                              +++..                       ....+++..+..++.|++.||.|||++++ +||||||+|||+++
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i-vH~dikp~nill~~  162 (290)
T cd05045          84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL-VHRDLAARNVLVAE  162 (290)
T ss_pred             ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe-ehhhhhhheEEEcC
Confidence                    22211                       11247888999999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828         144 RWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       144 ~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ++.+||+|||+++......                         ....|+||||+++|+
T Consensus       163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e  221 (290)
T cd05045         163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  221 (290)
T ss_pred             CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence            9999999999987532110                         112388888888887

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.69  E-value=9.2e-17  Score=150.59  Aligned_cols=113  Identities=20%  Similarity=0.339  Sum_probs=88.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEee----------------cCcEEEEEEcCCCC-hhHHHHHHHHHHH-------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY----------------KGRIFAIKRIPKKS-VDITRAMKKELKI-------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------   94 (392)
                      .|...+.||+|+||.||++.+..                ++..||+|.+.... ....+.+.+|+.+             
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            35567789999999999986432                34579999997543 2345677788776             


Q ss_pred             ----------------------HHhhcCC----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc
Q psy6828          95 ----------------------DIMENED----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD  142 (392)
Q Consensus        95 ----------------------~~l~~~~----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~  142 (392)
                                            +++....          ..+++..+..++.|++.||.|||++++ +||||||+|||++
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dlkp~Nili~  164 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF-VHRDLATRNCLVG  164 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe-ecccCChheEEEc
Confidence                                  2222111          136677899999999999999999999 9999999999999


Q ss_pred             CCceEEEeccccchhc
Q psy6828         143 SRWVVKLADFGLTEFK  158 (392)
Q Consensus       143 ~~~~~kl~DFGla~~~  158 (392)
                      .++.++|+|||+++..
T Consensus       165 ~~~~~~l~dfg~~~~~  180 (296)
T cd05095         165 KNYTIKIADFGMSRNL  180 (296)
T ss_pred             CCCCEEeccCcccccc
Confidence            9999999999998753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4257|consensus

Probab=99.69  E-value=2.5e-17  Score=159.18  Aligned_cols=131  Identities=22%  Similarity=0.302  Sum_probs=113.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeec--Cc--EEEEEEcCCC-ChhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYK--GR--IFAIKRIPKK-SVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~--~~--~vAiK~~~~~-~~~~~~~~~~E~~~--------------------------   94 (392)
                      ....+.||+|.||.||.|.....  |+  -||||..+.. ....++.|..|..+                          
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE  470 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME  470 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence            34478899999999999985433  33  4899999874 44678899999888                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--  164 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--  164 (392)
                              +|++.....|+......+++||+.||.||||++. +||||...|||+.+...+||+|||+++.+.+....  
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrf-VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka  549 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRF-VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA  549 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhch-hhhhhhhhheeecCcceeeecccchhhhccccchhhc
Confidence                    8888877789999999999999999999999999 99999999999999999999999999987665432  


Q ss_pred             ----------------------cccccceeeeeee
Q psy6828         165 ----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ----------------------~~d~~s~g~~~~~  177 (392)
                                            .+|+|-||+.+||
T Consensus       550 S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWE  584 (974)
T KOG4257|consen  550 SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWE  584 (974)
T ss_pred             cccccceeecCccccchhcccchhhHHHHHHHHHH
Confidence                                  2399999999999

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.69  E-value=7.7e-17  Score=152.22  Aligned_cols=111  Identities=27%  Similarity=0.435  Sum_probs=88.7

Q ss_pred             ccCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKS---VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~---~~~~~~~~~E~~~----------------------------   94 (392)
                      ....+|+|+||.||+|.+..  +++.||+|.+....   ....+.+.+|+.+                            
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   83 (316)
T cd07842           4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLF   83 (316)
T ss_pred             EEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEE
Confidence            34569999999999999988  89999999998733   2223445556555                            


Q ss_pred             HH--------hh----cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC----CceEEEeccccchhc
Q psy6828          95 DI--------ME----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS----RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ~~--------l~----~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~----~~~~kl~DFGla~~~  158 (392)
                      ++        +.    .....+++..+..++.|++.||.|||++++ +||||||+||+++.    ++.+||+|||+++..
T Consensus        84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~  162 (316)
T cd07842          84 DYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV-LHRDLKPANILVMGEGPERGVVKIGDLGLARLF  162 (316)
T ss_pred             eCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE-eeCCCCHHHEEEcCCCCccceEEECCCcccccc
Confidence            11        11    111257889999999999999999999999 99999999999999    899999999998864


Q ss_pred             c
Q psy6828         159 R  159 (392)
Q Consensus       159 ~  159 (392)
                      .
T Consensus       163 ~  163 (316)
T cd07842         163 N  163 (316)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.69  E-value=1.5e-16  Score=155.31  Aligned_cols=54  Identities=30%  Similarity=0.415  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||+++..
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~i-vHrdlkp~NiLl~~~~~~kL~DfGla~~~  289 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNC-VHRDLAARNVLICEGKLVKICDFGLARDI  289 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCc-CcccCCcceEEEeCCCEEEEEecCcceec
Confidence            5677788899999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.69  E-value=5.3e-17  Score=150.97  Aligned_cols=109  Identities=27%  Similarity=0.438  Sum_probs=89.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------------   94 (392)
                      .+.+|+|++|.||++.+..+|+.||+|++.....  ...+.+.+|+..                                
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~~~   83 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLD   83 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccCcC
Confidence            4568999999999999999999999999875432  222445666655                                


Q ss_pred             --HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++.. ....+++..+..++.|++.||.|||++++ +||||+|+||+++.++.++|+|||++...
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~-~H~dl~p~nil~~~~~~~~l~df~~~~~~  149 (283)
T cd07835          84 LKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV-LHRDLKPQNLLIDREGALKLADFGLARAF  149 (283)
T ss_pred             HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence              22222 21258999999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.69  E-value=8.8e-17  Score=149.47  Aligned_cols=113  Identities=25%  Similarity=0.375  Sum_probs=89.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.+|+|+||.||++.+..+++.||+|.+..... ....+..|+.+                             
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            344556789999999999999999999999999865432 22334444443                             


Q ss_pred             -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                   +++.. ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++...
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vH~dl~~~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence                         11111 12247888899999999999999999999 99999999999999999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.69  E-value=1.8e-16  Score=151.30  Aligned_cols=113  Identities=22%  Similarity=0.267  Sum_probs=87.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeec-------CcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYK-------GRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      .+...+.||+|+||.||++.+...       +..||+|.+..... ...+.+.+|+.+                      
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            455678899999999999986532       23699998875432 334556666665                      


Q ss_pred             --------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828          95 --------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW  145 (392)
Q Consensus        95 --------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~  145 (392)
                                    +++...               ...+++.++..++.|++.||.|||++++ +||||||+||+++.++
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-vH~dlkp~Nill~~~~  171 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC-IHRDLAARNVLVTEDN  171 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe-eccccccceEEEcCCC
Confidence                          222211               1247778889999999999999999999 9999999999999999


Q ss_pred             eEEEeccccchhc
Q psy6828         146 VVKLADFGLTEFK  158 (392)
Q Consensus       146 ~~kl~DFGla~~~  158 (392)
                      .+||+|||+++..
T Consensus       172 ~~kL~Dfg~~~~~  184 (334)
T cd05100         172 VMKIADFGLARDV  184 (334)
T ss_pred             cEEECCcccceec
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=3.1e-17  Score=164.92  Aligned_cols=115  Identities=17%  Similarity=0.142  Sum_probs=80.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecC-cEEEEEEcC--------------C---CChhHHHHHHHHHHH-----------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIP--------------K---KSVDITRAMKKELKI-----------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~--------------~---~~~~~~~~~~~E~~~-----------   94 (392)
                      ..|...+.||+|+||+||+|..+... ...+.|.+.              +   ........+.+|+.+           
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            45666789999999999998765432 222222111              0   111233456777776           


Q ss_pred             -----------------------HHhhcCC----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceE
Q psy6828          95 -----------------------DIMENED----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV  147 (392)
Q Consensus        95 -----------------------~~l~~~~----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~  147 (392)
                                             +++....    ......++..++.|++.||.|||++++ +||||||+|||++.++.+
T Consensus       228 l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI-iHrDLKP~NILl~~~~~v  306 (501)
T PHA03210        228 IEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL-IHRDIKLENIFLNCDGKI  306 (501)
T ss_pred             EeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCE
Confidence                                   1111111    123356678899999999999999999 999999999999999999


Q ss_pred             EEeccccchhcc
Q psy6828         148 KLADFGLTEFKR  159 (392)
Q Consensus       148 kl~DFGla~~~~  159 (392)
                      ||+|||+++...
T Consensus       307 kL~DFGla~~~~  318 (501)
T PHA03210        307 VLGDFGTAMPFE  318 (501)
T ss_pred             EEEeCCCceecC
Confidence            999999997653

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=1.4e-16  Score=149.95  Aligned_cols=113  Identities=20%  Similarity=0.227  Sum_probs=90.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      .+...+.+|+|+||.||++.+.     .++..||+|.++.... ...+.+.+|+.+                        
T Consensus        36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  115 (302)
T cd05055          36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL  115 (302)
T ss_pred             HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence            4556788999999999999753     3456899999876532 344567777766                        


Q ss_pred             ------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                  +++.. ....+++.++..++.|++.||.|||++++ +|+||||+|||++.++.+|++|||+++..
T Consensus       116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~dfg~~~~~  191 (302)
T cd05055         116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNVLLTHGKIVKICDFGLARDI  191 (302)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ehhhhccceEEEcCCCeEEECCCcccccc
Confidence                        33322 22238999999999999999999999999 99999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=9.4e-17  Score=148.17  Aligned_cols=113  Identities=25%  Similarity=0.401  Sum_probs=91.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.+|+|+||.||++.+..+++.|++|.+..... ..+.+.+|+.+                             
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            456667889999999999999988999999999876543 23456666554                             


Q ss_pred             -------------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                   +++..   .+..+++..+..++.|++.||.|||++++ +|+||+|+||+++.++.+||+|||++...
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV-IHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCHHHEEEccCCeEEECCCccceec
Confidence                         11111   12368889999999999999999999999 99999999999999999999999987643

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.69  E-value=1.5e-16  Score=148.49  Aligned_cols=113  Identities=19%  Similarity=0.248  Sum_probs=87.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      .|...+.||+|+||.||+|..+.     .+..||+|.++.... .....+.+|+.+                        
T Consensus         7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (288)
T cd05061           7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV   86 (288)
T ss_pred             HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            45556789999999999997653     345899999875432 333456667655                        


Q ss_pred             -----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 -----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 -----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                 +++...         ...++...+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dikp~nili~~~~~~~L~Dfg~  165 (288)
T cd05061          87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM  165 (288)
T ss_pred             EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cCCCCChheEEEcCCCcEEECcCCc
Confidence                       233211         1134567788999999999999999999 9999999999999999999999999


Q ss_pred             chhc
Q psy6828         155 TEFK  158 (392)
Q Consensus       155 a~~~  158 (392)
                      ++..
T Consensus       166 ~~~~  169 (288)
T cd05061         166 TRDI  169 (288)
T ss_pred             cccc
Confidence            8743

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.69  E-value=1.6e-16  Score=147.58  Aligned_cols=113  Identities=21%  Similarity=0.254  Sum_probs=91.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEee----cCcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY----KGRIFAIKRIPKKS-VDITRAMKKELKI-------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~----~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------   94 (392)
                      .|...+.+|+|+||.||+|.+..    ++..|++|.+.... ....+.+.+|..+                         
T Consensus         7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   86 (280)
T cd05043           7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFV   86 (280)
T ss_pred             heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEE
Confidence            34556779999999999999876    35789999987542 3445667777665                         


Q ss_pred             -----------HHhhcCC-------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -----------DIMENED-------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -----------~~l~~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                 +++....       ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++
T Consensus        87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i-~H~di~p~nil~~~~~~~kl~d~g~~~  165 (280)
T cd05043          87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV-IHKDIAARNCVIDEELQVKITDNALSR  165 (280)
T ss_pred             EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccCHhhEEEcCCCcEEECCCCCcc
Confidence                       3332211       358899999999999999999999999 999999999999999999999999997


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       166 ~~  167 (280)
T cd05043         166 DL  167 (280)
T ss_pred             cc
Confidence            54

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.69  E-value=9.3e-17  Score=149.51  Aligned_cols=113  Identities=21%  Similarity=0.299  Sum_probs=88.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+..... ..+.+.+|+.+                             
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~   96 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW   96 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence            344556789999999999999999999999999865322 12334444433                             


Q ss_pred             ---HHhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---DIMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +++..            ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (286)
T cd06638          97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT-IHRDVKGNNILLTTEGGVKLVDFGVSAQL  174 (286)
T ss_pred             EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc-cccCCCHHhEEECCCCCEEEccCCceeec
Confidence               11111            12257888899999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=8.5e-17  Score=150.32  Aligned_cols=112  Identities=21%  Similarity=0.317  Sum_probs=88.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|.....+|+|+||.||++.+..+++.+|+|.+..... ....+.+|+.+                              
T Consensus        23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l  101 (291)
T cd06639          23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL  101 (291)
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence            34455679999999999999999999999999975432 12333444433                              


Q ss_pred             -----------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                 ++++   .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus       102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~nili~~~~~~kl~dfg~~~~~  178 (291)
T cd06639         102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI-IHRDVKGNNILLTTEGGVKLVDFGVSAQL  178 (291)
T ss_pred             EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEeecccchhc
Confidence                       1111   122358899999999999999999999999 99999999999999999999999998754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.68  E-value=1.8e-16  Score=149.92  Aligned_cols=114  Identities=21%  Similarity=0.282  Sum_probs=89.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKSV-DITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------   94 (392)
                      ..+...+.+|+|+||.||++.+..       ....+|+|.+..... .....+.+|+.+                     
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            345567889999999999998642       345799999875432 334556677655                     


Q ss_pred             ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                     +++...               ...+++.++..++.|++.||.|||++++ +||||||+|||++.+
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi-~H~dlkp~Nill~~~  170 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC-IHRDLAARNVLVTED  170 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe-eeccccceeEEEcCC
Confidence                           222211               1247888999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhc
Q psy6828         145 WVVKLADFGLTEFK  158 (392)
Q Consensus       145 ~~~kl~DFGla~~~  158 (392)
                      +.+||+|||+++..
T Consensus       171 ~~~kL~Dfg~~~~~  184 (314)
T cd05099         171 NVMKIADFGLARGV  184 (314)
T ss_pred             CcEEEccccccccc
Confidence            99999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.68  E-value=1.1e-16  Score=149.06  Aligned_cols=114  Identities=24%  Similarity=0.369  Sum_probs=95.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|.....+|+|+||.||.+.+..+++.|++|.+..... ..+.+.+|+..                            
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            3445566789999999999999988999999999976544 44566777665                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++......+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus        97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  166 (286)
T cd06614          97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQL  166 (286)
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCChhhEEEcCCCCEEECccchhhhh
Confidence                   3333333368999999999999999999999999 99999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.68  E-value=1.7e-16  Score=147.24  Aligned_cols=112  Identities=19%  Similarity=0.260  Sum_probs=89.3

Q ss_pred             eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +...+.||+|+||.||++.+..     ++..||+|.+..... .....+.+|+.+                         
T Consensus         8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   87 (277)
T cd05036           8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL   87 (277)
T ss_pred             cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence            4456789999999999999877     778999999875433 333457777665                         


Q ss_pred             ----------HHhhcCC------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccc
Q psy6828          95 ----------DIMENED------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLT  155 (392)
Q Consensus        95 ----------~~l~~~~------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla  155 (392)
                                +++....      ..+++..+..++.||+.||.|||++++ +||||||+||+++.++   .+||+|||++
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~nil~~~~~~~~~~kl~dfg~~  166 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHF-IHRDIAARNCLLTCKGPGRVAKIADFGMA  166 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccchheEEEeccCCCcceEeccCccc
Confidence                      3332221      248889999999999999999999999 9999999999998764   5999999998


Q ss_pred             hhc
Q psy6828         156 EFK  158 (392)
Q Consensus       156 ~~~  158 (392)
                      +..
T Consensus       167 ~~~  169 (277)
T cd05036         167 RDI  169 (277)
T ss_pred             ccc
Confidence            754

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.68  E-value=1.9e-16  Score=150.76  Aligned_cols=105  Identities=17%  Similarity=0.226  Sum_probs=86.3

Q ss_pred             CCCCCc--ceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDF--RYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      +.||+|  +|++||++.+..+|+.||+|.++....  ...+.+.+|+.+                               
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~   83 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY   83 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence            458888  789999999999999999999976432  334556667666                               


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                          +++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.++++||+.+
T Consensus        84 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-iH~dlkp~Nil~~~~~~~~l~~~~~~  148 (327)
T cd08227          84 GSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY-VHRSVKASHILISVDGKVYLSGLRSN  148 (327)
T ss_pred             CcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCChhhEEEecCCcEEEcccchh
Confidence                23322 12248999999999999999999999999 99999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.68  E-value=1.4e-16  Score=147.56  Aligned_cols=112  Identities=22%  Similarity=0.316  Sum_probs=90.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.+|+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|..+                            
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            3445679999999999999999999999999976432   223344555444                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++.... .+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++++|||++....
T Consensus        83 ~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~-~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          83 YAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGI-IHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEecCCccccccC
Confidence                    2222222 58999999999999999999999999 999999999999999999999999987643

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.68  E-value=7.1e-17  Score=147.74  Aligned_cols=112  Identities=17%  Similarity=0.254  Sum_probs=91.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.+|+|+||.||.+.+..+|+.||+|.+....  ....+.+.+|+.+                             
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            344667999999999999999999999999986432  2334566777666                             


Q ss_pred             ------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.. ....+++.++..++.|++.|+.|||++++ +|+||+|+||+++.++.++++|||++...
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~~l~~~nil~~~~~~~~l~d~~~~~~~  151 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI-LHRDIKSQNIFLTKDGTIKLGDFGIARVL  151 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence                  22222 22357889999999999999999999999 99999999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=1.4e-16  Score=165.22  Aligned_cols=113  Identities=19%  Similarity=0.338  Sum_probs=92.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      |...+.||+|+||.||+|.+..+++.||||++++...   .....+..|+.+                          +|
T Consensus         6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy   85 (669)
T cd05610           6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEY   85 (669)
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeC
Confidence            4456779999999999999999999999999976432   233556666655                          22


Q ss_pred             hhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          97 MEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        97 l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +..        ....+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        86 ~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gI-iHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610          86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGI-IHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            211        12257899999999999999999999999 999999999999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.68  E-value=1e-16  Score=153.62  Aligned_cols=133  Identities=26%  Similarity=0.359  Sum_probs=103.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------HHhhc---------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------DIMEN---------   99 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~~l~~---------   99 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+....  ....+.+.+|+.+             ++...         
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD   94 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence            44666788999999999999999999999999986532  2233445556555             11100         


Q ss_pred             ----------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828         100 ----------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus       100 ----------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                      ....+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++....... 
T Consensus        95 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi-~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~  173 (343)
T cd07851          95 VYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGI-IHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT  173 (343)
T ss_pred             EEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEcccccccccccccc
Confidence                            01258999999999999999999999999 999999999999999999999999987542210 


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~e  208 (343)
T cd07851         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHH
Confidence                                123489999998888

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.67  E-value=9.5e-17  Score=149.51  Aligned_cols=111  Identities=22%  Similarity=0.326  Sum_probs=90.2

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhc
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMEN   99 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~   99 (392)
                      ...+.||+|+||+||++.+..+++.||+|.+..... ...+.+.+|+++                          +|+..
T Consensus         8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (284)
T cd06620           8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDC   87 (284)
T ss_pred             HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCC
Confidence            345679999999999999999999999998865432 345667778776                          22221


Q ss_pred             --------CCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         100 --------EDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              ....+++..+..++.|++.+|.|||+ .++ +||||||+||++++++.++|+|||++...
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620          88 GSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRI-MHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCe-eccCCCHHHEEECCCCcEEEccCCcccch
Confidence                    12257889999999999999999997 578 99999999999999999999999987643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.67  E-value=2.3e-16  Score=147.17  Aligned_cols=112  Identities=21%  Similarity=0.349  Sum_probs=89.2

Q ss_pred             eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +...+.||+|+||.||++.+..     ++..||+|.+..... ...+.+.+|+.+                         
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv   86 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL   86 (288)
T ss_pred             ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence            3446789999999999998653     578999999976532 344567777765                         


Q ss_pred             ----------HHhhcC---------------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 ----------DIMENE---------------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 ----------~~l~~~---------------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                +++...                     ...+++..+..++.|++.||.|||++++ +||||||+||+++.
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i-~H~dl~p~nil~~~  165 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF-VHRDLATRNCLVGE  165 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe-ecccccHhheEecC
Confidence                      222211                     1146788889999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhc
Q psy6828         144 RWVVKLADFGLTEFK  158 (392)
Q Consensus       144 ~~~~kl~DFGla~~~  158 (392)
                      ++.+||+|||++...
T Consensus       166 ~~~~~l~dfg~~~~~  180 (288)
T cd05050         166 NMVVKIADFGLSRNI  180 (288)
T ss_pred             CCceEECccccceec
Confidence            999999999998643

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.6e-16  Score=145.80  Aligned_cols=110  Identities=24%  Similarity=0.421  Sum_probs=90.5

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.+|+|+||.||+|.+..+++.||+|.++.... ...+.+.+|+.+                               
T Consensus         4 ~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~   83 (277)
T cd06917           4 QRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEY   83 (277)
T ss_pred             hhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEec
Confidence            345679999999999999999999999999865422 334455566554                               


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             ++++..  .+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++....
T Consensus        84 ~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06917          84 AEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGV-IHRDIKAANILVTNTGNVKLCDFGVAALLN  152 (277)
T ss_pred             CCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence                   222222  58899999999999999999999999 999999999999999999999999887654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.67  E-value=1.8e-16  Score=147.89  Aligned_cols=130  Identities=22%  Similarity=0.326  Sum_probs=101.8

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.+|.|++|.||++.+..+++.||+|.+..... .....+.+|+++                               
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621           4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence            345679999999999999999999999999975433 345567778776                               


Q ss_pred             ------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                            +++.   .....+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++.......   
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  162 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI-IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT  162 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEecCCeEEEeecccccccccccccc
Confidence                  1111   122347888899999999999999999999 999999999999999999999999976432111   


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ...+|+||+|+++|+
T Consensus       163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~  195 (287)
T cd06621         163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLE  195 (287)
T ss_pred             ccCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence                              112488888888887

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.67  E-value=9.1e-17  Score=145.73  Aligned_cols=104  Identities=14%  Similarity=0.154  Sum_probs=80.0

Q ss_pred             cceeEEEEEEEeecCcEEEEEEcCCCChhHHHH--HHHHH--HH-----------------HHhhcC--------CcCCC
Q psy6828          55 FRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA--MKKEL--KI-----------------DIMENE--------DVKLD  105 (392)
Q Consensus        55 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~--~~~E~--~~-----------------~~l~~~--------~~~l~  105 (392)
                      |.||.||++.+..+++.||+|.+++......+.  .....  .+                 +++..+        ...++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            889999999999999999999997654211110  00000  00                 222211        12589


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         106 NMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       106 ~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||++....
T Consensus        84 ~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~df~~~~~~~  136 (237)
T cd05576          84 EECVKRWAAEMVVALDALHREGI-VCRDLNPNNILLDDRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEecccchhccc
Confidence            99999999999999999999999 999999999999999999999999876543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.67  E-value=1.8e-16  Score=147.17  Aligned_cols=111  Identities=26%  Similarity=0.455  Sum_probs=92.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~--------------------------------   94 (392)
                      .+.+|+|++|.||++.+..+++.+++|.++.....  ....+.+|+.+                                
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   83 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTD   83 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCCC
Confidence            45799999999999999889999999998765432  34456666554                                


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                        +++......+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||.+.....
T Consensus        84 l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~df~~~~~~~~  150 (283)
T cd05118          84 LYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI-LHRDLKPENLLINTEGVLKLADFGLARSFGS  150 (283)
T ss_pred             HHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe-eecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence              3333334478999999999999999999999999 9999999999999999999999999865543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.67  E-value=3.4e-16  Score=155.47  Aligned_cols=75  Identities=24%  Similarity=0.274  Sum_probs=58.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccceeeeeeeccC
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNR  180 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s~g~~~~~~~~  180 (392)
                      +++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++......... ...+..+.+.|.+||
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~i-vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIGI-VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPE  380 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChh
Confidence            4566788999999999999999999 99999999999999999999999999765432211 122233445666665

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.67  E-value=5.2e-16  Score=143.33  Aligned_cols=106  Identities=13%  Similarity=0.249  Sum_probs=81.1

Q ss_pred             CCCCcceeEEEEEEEeecC--cEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKG--RIFAIKRIPKKS-VDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~--~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||.||++.....+  ..+++|.+.... ....+.+.+|+.+                                 
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            5899999999999754332  356788776543 2345667777654                                 


Q ss_pred             --HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                        +++...   ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF-LHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe-eccCCccceEEEcCCccEEecccccccc
Confidence              222211   1135666778999999999999999999 9999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.67  E-value=3.6e-16  Score=143.72  Aligned_cols=113  Identities=28%  Similarity=0.413  Sum_probs=93.2

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.+|.|+||.||++....++..+|+|.+..... .....+.+|+..                               
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~   83 (267)
T cd06610           4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSG   83 (267)
T ss_pred             eeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCC
Confidence            345679999999999999888999999999975432 344567777765                               


Q ss_pred             ----HHhhcC--CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ----DIMENE--DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----~~l~~~--~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                          +++...  ...+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++.....
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i-~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          84 GSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             CcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence                333322  1358999999999999999999999999 9999999999999999999999999876543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.6e-16  Score=143.28  Aligned_cols=106  Identities=23%  Similarity=0.317  Sum_probs=88.5

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------------   94 (392)
                      +|+|+||.||.+.+..+++.||+|.+.+...   .....+..|+.+                                  
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6899999999999988899999999876543   234466666655                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                       +++.... .+++..+..++.|++.||.|+|+.++ +|+||||+||+++.++.++|+|||++....
T Consensus        81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~  144 (250)
T cd05123          81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGI-IYRDLKPENILLDADGHIKLTDFGLAKELS  144 (250)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCcceEEEcCCCcEEEeecCcceecc
Confidence             2333222 58999999999999999999999999 999999999999999999999999987543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.67  E-value=2.9e-16  Score=144.85  Aligned_cols=129  Identities=17%  Similarity=0.266  Sum_probs=98.1

Q ss_pred             ccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCC----------hhHHHHHHHHHHH----------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKS----------VDITRAMKKELKI----------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~----------~~~~~~~~~E~~~----------------------   94 (392)
                      ..+.+|+|+||.||++.+.. +++.+|+|.+....          ......+.+|+.+                      
T Consensus         4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   83 (269)
T cd08528           4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR   83 (269)
T ss_pred             hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence            45679999999999999887 67899999885321          1233445566554                      


Q ss_pred             -----HH---------h---hcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -----DI---------M---ENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -----~~---------l---~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                           ++         +   ......+++..++.++.|++.||.|||+ .++ +|+||||+||+++.++.+||+|||++.
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~  162 (269)
T cd08528          84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRI-VHRDLTPNNIMLGEDDKVTITDFGLAK  162 (269)
T ss_pred             EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCce-eecCCCHHHEEECCCCcEEEeccccee
Confidence                 11         1   1123358899999999999999999996 678 999999999999999999999999987


Q ss_pred             hccccc----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                      ....|+||+|+++|+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~  205 (269)
T cd08528         163 QKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ  205 (269)
T ss_pred             ecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence            543321                      112388888888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.67  E-value=2.5e-16  Score=146.36  Aligned_cols=111  Identities=28%  Similarity=0.418  Sum_probs=86.3

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------------   94 (392)
                      ..+.||+|+||+||+|....+++.|+||.+...... ......+|+..                                
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (283)
T cd07830           3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG   82 (283)
T ss_pred             eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCC
Confidence            356799999999999998888999999998654221 11111222222                                


Q ss_pred             ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                         +++... ...+++.++..++.|++.+|.|||++++ +|+||||+||++++++.++|+|||++....
T Consensus        83 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i-~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~  150 (283)
T cd07830          83 NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF-FHRDLKPENLLVSGPEVVKIADFGLAREIR  150 (283)
T ss_pred             CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChhhEEEcCCCCEEEeecccceecc
Confidence               222222 1357999999999999999999999999 999999999999999999999999987543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.67  E-value=1.5e-16  Score=145.46  Aligned_cols=112  Identities=21%  Similarity=0.270  Sum_probs=89.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      ...+.+|+|+||.||++.+..+|+.||+|.+.....  ...+.+.+|+.+                              
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (257)
T cd08225           3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD   82 (257)
T ss_pred             eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence            345679999999999999999999999999865422  234556677765                              


Q ss_pred             -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcc
Q psy6828          95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~  159 (392)
                           +++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||++++++ .+|++|||.+....
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (257)
T cd08225          83 GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI-LHRDIKSQNIFLSKNGMVAKLGDFGIARQLN  153 (257)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence                 22221 22257899999999999999999999999 9999999999998885 46999999887543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0596|consensus

Probab=99.66  E-value=6.2e-17  Score=154.76  Aligned_cols=154  Identities=16%  Similarity=0.199  Sum_probs=113.6

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC--ChhHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK--SVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~E~~~----------------------------   94 (392)
                      .|...++||+||-++||++. ..+.+.||+|++...  ..+...-+.+|+..                            
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~-~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVL-NSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             hhhHHHhhcCCCcceeeeee-cCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            34557789999999999997 445567888877533  23556678888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD  167 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d  167 (392)
                             .+++.+....+.-.++.+..|++.++.++|++|| ||.||||.|+|+ -.|.+||+|||+|..+..+......
T Consensus       441 ~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI-VHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~k  518 (677)
T KOG0596|consen  441 CGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI-VHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVK  518 (677)
T ss_pred             cccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce-eecCCCcccEEE-EeeeEEeeeechhcccCccccceee
Confidence                   4555555455545889999999999999999999 999999999998 5589999999999988765543333


Q ss_pred             ccceeeeeeeccCCCC---------------cccccccccchhhhccCC
Q psy6828         168 QHSFLQHTYHVNRAGS---------------TESLHCKCDEALLFEMLP  201 (392)
Q Consensus       168 ~~s~g~~~~~~~~~~~---------------~~~~d~~~~~~lL~~~lp  201 (392)
                      --..|++-|+.||...               ..+.|+|+++++|++|+.
T Consensus       519 dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY  567 (677)
T KOG0596|consen  519 DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY  567 (677)
T ss_pred             ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence            3345777777655111               124566777777777763

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.66  E-value=3.9e-16  Score=149.14  Aligned_cols=113  Identities=22%  Similarity=0.321  Sum_probs=90.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.+|+|+||.||+|.+..+++.+|+|.+.+..  ......+.+|+.+                          
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            344566778999999999999998899999999886432  2223344455544                          


Q ss_pred             ---H--------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---D--------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---~--------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                         +        ++..  ..+++.....++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        86 lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i-~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          86 LVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNV-IHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             EEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence               1        1111  157888889999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.65  E-value=3.7e-16  Score=144.05  Aligned_cols=108  Identities=23%  Similarity=0.325  Sum_probs=85.7

Q ss_pred             CCCCCcceeEEEEEEEeecC------cEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKG------RIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~------~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      +.+|+|+||.||++......      +.+|+|.+.+... .....+.+|+.+                            
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            36899999999999876543      6899999865432 345567777666                            


Q ss_pred             -------HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-----eEEEeccccch
Q psy6828          95 -------DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-----VVKLADFGLTE  156 (392)
Q Consensus        95 -------~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-----~~kl~DFGla~  156 (392)
                             +++..      ....+++.++..++.|++.||.|||++++ +|+||||+||+++.++     .+|++|||+++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~  159 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHF-IHRDLAARNCLVSEKGYDADRVVKIGDFGLAR  159 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChheEEEecCCCCCCcceEECCccccc
Confidence                   22221      11237888999999999999999999999 9999999999999877     89999999987


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       160 ~~  161 (269)
T cd05044         160 DI  161 (269)
T ss_pred             cc
Confidence            54

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.65  E-value=4e-16  Score=142.47  Aligned_cols=113  Identities=19%  Similarity=0.344  Sum_probs=90.9

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HH--
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DI--   96 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~--   96 (392)
                      ...+.+|+|+||.||++.+..+++.+|+|.+.....  .....+.+|+.+                          ++  
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd08530           3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAP   82 (256)
T ss_pred             eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcC
Confidence            345679999999999999999999999999875432  233455666654                          22  


Q ss_pred             -------hhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          97 -------MEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        97 -------l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                             +..   ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+|++|||+++....
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i-~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI-LHRDLKSANILLVANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence                   211   11358889999999999999999999999 9999999999999999999999999876543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.65  E-value=7.7e-16  Score=146.68  Aligned_cols=116  Identities=26%  Similarity=0.447  Sum_probs=93.3

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------   94 (392)
                      ....|...+.||+|+||.||++.+..+++.||+|.+.+...  ...+.+.+|+.+                         
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            44567778899999999999999999999999998865322  234556667665                         


Q ss_pred             --HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                        +++..      ....+++..+..++.|+++||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        88 v~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i-iH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          88 VTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGV-VHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             EeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEeECCCCCEEeCcccccccc
Confidence              11110      11257888889999999999999999999 99999999999999999999999988753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0695|consensus

Probab=99.65  E-value=5.3e-17  Score=146.67  Aligned_cols=152  Identities=19%  Similarity=0.184  Sum_probs=108.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------H
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------D   95 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~   95 (392)
                      +...+.+|+|+|.+|.+++++.+.+.||+|++++.-.   +..+..+.|-..                           +
T Consensus       252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie  331 (593)
T KOG0695|consen  252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE  331 (593)
T ss_pred             ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence            3446789999999999999999999999999976533   222233333333                           2


Q ss_pred             Hhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828          96 IMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD  167 (392)
Q Consensus        96 ~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d  167 (392)
                      |...        .+.+++++.++.+-.+|+.||.|||+.|| |.||||.+|+|++..|++||+|+|.++.--....+  .
T Consensus       332 yv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgi-iyrdlkldnvlldaeghikltdygmcke~l~~gd~--t  408 (593)
T KOG0695|consen  332 YVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT--T  408 (593)
T ss_pred             EecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCe-eeeeccccceEEccCCceeecccchhhcCCCCCcc--c
Confidence            2222        23379999999999999999999999999 99999999999999999999999999853222111  1


Q ss_pred             ccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         168 QHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       168 ~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ....|++-|.+|+    -.+.-++|+|.++.++..|+
T Consensus       409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemm  445 (593)
T KOG0695|consen  409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM  445 (593)
T ss_pred             ccccCCCcccchhhhcccccCceehHHHHHHHHHHHH
Confidence            1123555555444    22233556666666555554

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.65  E-value=2.7e-16  Score=146.66  Aligned_cols=109  Identities=21%  Similarity=0.319  Sum_probs=86.2

Q ss_pred             cCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH---------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI---------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~---------------------------   94 (392)
                      .+.||+|+||.||++.+.   .+++.||||.+.+...    ...+.+.+|+.+                           
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   84 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL   84 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence            456999999999999854   4678999999875422    233455666654                           


Q ss_pred             HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +++..        ....+++..+..++.|++.+|.|||+.++ +||||||+||+++.++.++++|||+++..
T Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~-~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          85 DYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGI-IYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             ecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEEECcccccc
Confidence            12211        12358899999999999999999999999 99999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0665|consensus

Probab=99.64  E-value=1.6e-16  Score=142.81  Aligned_cols=133  Identities=23%  Similarity=0.300  Sum_probs=102.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ..+|....++|.|.- .|..+.+.-+++.||+|++.....  ...++..+|...                          
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            456777889999988 888898889999999999865422  223344455544                          


Q ss_pred             ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828          95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  163 (392)
                            +++..     ....++.+.+..++.|+++|++|+|+.+| +||||||+||++..++.+||.|||+++.......
T Consensus        95 e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~I-ihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~  173 (369)
T KOG0665|consen   95 EVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGI-IHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM  173 (369)
T ss_pred             hHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcce-eecccCcccceecchhheeeccchhhcccCcccc
Confidence                  11110     11258888999999999999999999999 9999999999999999999999999986544411


Q ss_pred             ----------------------ccccccceeeeeee
Q psy6828         164 ----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~  177 (392)
                                            ...|+||.||++=|
T Consensus       174 mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gE  209 (369)
T KOG0665|consen  174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  209 (369)
T ss_pred             cCchhheeeccCchheeccCCcccchhhhhhhHHHH
Confidence                                  12299999998877

>KOG1163|consensus

Probab=99.64  E-value=7.9e-16  Score=133.47  Aligned_cols=115  Identities=23%  Similarity=0.254  Sum_probs=92.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...++||.|+||.+|+|.+..+|+.||||.-+.....  ..+..|..+                            
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            34567789999999999999999999999999987654321  123333333                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~  160 (392)
                             ++++..+..++.+.+.-++-|++.-++|+|.++. |||||||+|.|..-+   ..+.++|||+|+...+
T Consensus        92 LLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~f-iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   92 LLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNF-IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             ccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcc-ccccCCccceeeccccccceEEEEeccchhhhcc
Confidence                   5555566679999999999999999999999999 999999999999643   5689999999987543

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.63  E-value=1.3e-15  Score=138.82  Aligned_cols=112  Identities=28%  Similarity=0.453  Sum_probs=93.8

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ..+.+|+|++|.||++.+..+++.|++|.+.....  ...+.+.+|+..                               
T Consensus         4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   83 (260)
T cd06606           4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV   83 (260)
T ss_pred             eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence            34679999999999999998999999999976653  445667777765                               


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                            +++.+.. .+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||.+......
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          84 SGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI-VHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence                  2233322 68999999999999999999999999 99999999999999999999999998866543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.63  E-value=1.5e-15  Score=144.70  Aligned_cols=103  Identities=17%  Similarity=0.331  Sum_probs=84.1

Q ss_pred             CCCc--ceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------------
Q psy6828          52 DSDF--RYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------------   94 (392)
Q Consensus        52 lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------------   94 (392)
                      +|+|  +||+||++.+..+|+.||+|.+.....  ...+.+.+|+.+                                 
T Consensus         6 ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~   85 (328)
T cd08226           6 IGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS   85 (328)
T ss_pred             hCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence            5555  999999999999999999999875432  334567777665                                 


Q ss_pred             --HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 --DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 --~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                        +++.+ ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++||+.+
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-vHrDlkp~Nill~~~~~~~~~~~~~~  148 (328)
T cd08226          86 ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY-IHRNIKASHILISGDGLVSLSGLSHL  148 (328)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEeCCCcEEEechHHH
Confidence              22222 12248889999999999999999999999 99999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.62  E-value=1.2e-15  Score=144.11  Aligned_cols=101  Identities=20%  Similarity=0.280  Sum_probs=80.5

Q ss_pred             ceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------------HHhh
Q psy6828          56 RYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------------DIME   98 (392)
Q Consensus        56 ~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------------~~l~   98 (392)
                      +++.||.+.+..+++.||+|+++...  ....+.+.+|+.+                                   +++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            44556666666789999999997652  3445667777766                                   2332


Q ss_pred             c-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          99 N-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        99 ~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      . ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||.+..
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i-vH~dlk~~Nili~~~~~~kl~d~~~~~~  150 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGF-IHRSVKASHILLSGDGKVVLSGLRYSVS  150 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCcceEEEecCCceEEecCcccee
Confidence            2 12358899999999999999999999999 9999999999999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1027|consensus

Probab=99.62  E-value=1.7e-16  Score=158.24  Aligned_cols=125  Identities=24%  Similarity=0.373  Sum_probs=94.4

Q ss_pred             eccCCCCCccee-EEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          47 LSSNPDSDFRYS-AIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      ...+.+|.|+-| .||+|.  ..|+.||||.+-..   ......+|+..                               
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             ccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            446678899887 468885  66999999998543   33456677776                               


Q ss_pred             ----HHhhcC--CcCC-CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---C--ceEEEeccccchhccccc
Q psy6828          95 ----DIMENE--DVKL-DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---R--WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ----~~l~~~--~~~l-~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~--~~~kl~DFGla~~~~~~~  162 (392)
                          ++++..  +... ........+.|+++||++||+.++ +||||||.||||..   +  ..++|+|||+|+.+..+.
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i-VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI-VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc-ccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence                666663  1111 114567889999999999999999 99999999999976   3  468999999999764432


Q ss_pred             c--------------------------ccccccceeeeeee
Q psy6828         163 Y--------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~--------------------------~~~d~~s~g~~~~~  177 (392)
                      .                          ...|++|+||++|.
T Consensus       666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyY  706 (903)
T KOG1027|consen  666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYY  706 (903)
T ss_pred             chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEE
Confidence            1                          12399999999998

>KOG1165|consensus

Probab=99.60  E-value=7.9e-15  Score=132.72  Aligned_cols=114  Identities=20%  Similarity=0.358  Sum_probs=93.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |..++.||+|+||+.+.|.+..+++.||||.-+.++..  -.+..|...                               
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG  107 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG  107 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence            56789999999999999999999999999987655431  112222222                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-----ceEEEeccccchhccccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-----WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-----~~~kl~DFGla~~~~~~~  162 (392)
                          |++.-.+..|+-+.+..++.|++.-++|+|++.. |.|||||+|+||...     ..+.++|||+++...+..
T Consensus       108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~L-IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDL-IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcce-eecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence                6666667789999999999999999999999999 999999999999654     358999999999876543

>smart00090 RIO RIO-like kinase

Probab=99.59  E-value=5.4e-15  Score=133.81  Aligned_cols=113  Identities=21%  Similarity=0.175  Sum_probs=85.2

Q ss_pred             eeccCCCCCcceeEEEEEE-EeecCcEEEEEEcCCCChh------------------------HHHHHHHHHHH------
Q psy6828          46 SLSSNPDSDFRYSAIFTPI-GIYKGRIFAIKRIPKKSVD------------------------ITRAMKKELKI------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~-~~~~~~~vAiK~~~~~~~~------------------------~~~~~~~E~~~------   94 (392)
                      |....+||+|+||.||+|. +..+|+.||+|+++.....                        ....+.+|...      
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4557789999999999998 6778999999998753210                        01223455554      


Q ss_pred             ------------------HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCceEEcCCceE
Q psy6828          95 ------------------DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSA-LRYHGNLKASNCLVDSRWVV  147 (392)
Q Consensus        95 ------------------~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~-iiiHrDlKp~NIll~~~~~~  147 (392)
                                        +++..        ....++..++..++.|++.++.|||+++ + +||||||+||+++ ++.+
T Consensus       110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i-iH~Dikp~NIli~-~~~i  187 (237)
T smart00090      110 AGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGEL-VHGDLSEYNILVH-DGKV  187 (237)
T ss_pred             cCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCE-EeCCCChhhEEEE-CCCE
Confidence                              11111        1113455567899999999999999999 9 9999999999999 8899


Q ss_pred             EEeccccchhccc
Q psy6828         148 KLADFGLTEFKRD  160 (392)
Q Consensus       148 kl~DFGla~~~~~  160 (392)
                      +++|||.+.....
T Consensus       188 ~LiDFg~a~~~~~  200 (237)
T smart00090      188 VIIDVSQSVELDH  200 (237)
T ss_pred             EEEEChhhhccCC
Confidence            9999999876544

>KOG0587|consensus

Probab=99.58  E-value=7.5e-15  Score=147.35  Aligned_cols=132  Identities=22%  Similarity=0.323  Sum_probs=104.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ........+|+|.+|.||++.++.+++..|+|++....- ..+.+.-|.++                             
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW   97 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW   97 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence            334445679999999999999999999999999976532 23444445444                             


Q ss_pred             ------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 ------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 ------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                  |++++ ...++.|+.+..|+++++.|+.+||.+.+ +|||+|-.|||++.++.+||+|||++..++..
T Consensus        98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv-iHRDikG~NiLLT~e~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDST  176 (953)
T ss_pred             EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce-eeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence                        43332 24479999999999999999999999999 99999999999999999999999999865432


Q ss_pred             cc-----c-----------------------cccccceeeeeee
Q psy6828         162 EY-----T-----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~~-----~-----------------------~~d~~s~g~~~~~  177 (392)
                      ..     .                       ..|+||+|++..|
T Consensus       177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIE  220 (953)
T KOG0587|consen  177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIE  220 (953)
T ss_pred             cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeeh
Confidence            11     0                       1299999999988

>KOG0200|consensus

Probab=99.58  E-value=8.5e-15  Score=150.00  Aligned_cols=128  Identities=20%  Similarity=0.272  Sum_probs=102.3

Q ss_pred             cCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      .+.+|+|.||.|++|.-..       ....||||.++.... ...+.+..|+.+                          
T Consensus       301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v  380 (609)
T KOG0200|consen  301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI  380 (609)
T ss_pred             cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence            3499999999999997442       135799999975433 456778888887                          


Q ss_pred             ----------HHhhcCC---------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEE
Q psy6828          95 ----------DIMENED---------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL  149 (392)
Q Consensus        95 ----------~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl  149 (392)
                                +|++...               ..++..+...+..||+.|++||++++. +||||-..|||++.+..+||
T Consensus       381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~-vHRDLAaRNVLi~~~~~~kI  459 (609)
T KOG0200|consen  381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC-VHRDLAARNVLITKNKVIKI  459 (609)
T ss_pred             EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc-cchhhhhhhEEecCCCEEEE
Confidence                      4554443               238899999999999999999999999 99999999999999999999


Q ss_pred             eccccchhccccc--------------------------cccccccceeeeeee
Q psy6828         150 ADFGLTEFKRDAE--------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       150 ~DFGla~~~~~~~--------------------------~~~~d~~s~g~~~~~  177 (392)
                      +|||+++......                          ...+|+||||+++||
T Consensus       460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~E  513 (609)
T KOG0200|consen  460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWE  513 (609)
T ss_pred             ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHH
Confidence            9999998422111                          123499999999999

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.58  E-value=5e-15  Score=135.90  Aligned_cols=111  Identities=17%  Similarity=0.269  Sum_probs=83.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~--------------------------   94 (392)
                      |...+.+|+|+||.||++.+..++..+++|.++....     .....+.+|..+                          
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            4456789999999999999888777777776653221     122234445443                          


Q ss_pred             ---------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++.   .....+++.++..++.|++.||.|||+.++ +|+||||+||++++ +.+|++|||+++..
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~h~~l~~~nili~~-~~~~l~d~g~~~~~  155 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI-LHRDLKAKNIFLKN-NLLKIGDFGVSRLL  155 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc-cccCCChhheEeec-CCEeecccCceeec
Confidence                     1111   122358999999999999999999999999 99999999999975 56999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.57  E-value=8.9e-15  Score=130.57  Aligned_cols=111  Identities=25%  Similarity=0.399  Sum_probs=92.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH---------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI---------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~---------------------------------   94 (392)
                      .+.+|+|++|.||++.+..+++.+|+|.+...... ..+.+.+|+..                                 
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   83 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD   83 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence            46789999999999998888999999999876554 56677777665                                 


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                        +++......+++..+..++.|++.++.|||++++ +|+|++|+||+++.++.++|+|||++.....
T Consensus        84 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~  150 (225)
T smart00221       84 LFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI-VHRDLKPENILLGMDGLVKLADFGLARFIHR  150 (225)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence              2222222117889999999999999999999999 9999999999999999999999998876543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.55  E-value=2.2e-14  Score=125.87  Aligned_cols=108  Identities=31%  Similarity=0.495  Sum_probs=89.9

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH-----------------------------------H
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI-----------------------------------D   95 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~-----------------------------------~   95 (392)
                      +|+|++|.||++....+++.+++|.+...... ..+.+.+|+..                                   +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68999999999998888999999999866542 34567777666                                   3


Q ss_pred             HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhccc
Q psy6828          96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRD  160 (392)
Q Consensus        96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~  160 (392)
                      ++......+++..+..++.+++.++.|||+.++ +|+||+|.||+++. ++.++|+|||.+.....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~  145 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGI-IHRDLKPENILLDSDNGKVKLADFGLSKLLTS  145 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence            333332358889999999999999999999999 99999999999999 89999999999876544

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167|consensus

Probab=99.55  E-value=5.1e-15  Score=137.78  Aligned_cols=111  Identities=26%  Similarity=0.356  Sum_probs=88.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKSVDITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------   94 (392)
                      +.-|....++|+|+|++||++.+..   ..+.||+|.+...+  .-.++.+|+++                         
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i  112 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI  112 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence            4446778899999999999999887   78899999996543  23456667666                         


Q ss_pred             --HHhhcCC-----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828          95 --DIMENED-----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE  156 (392)
Q Consensus        95 --~~l~~~~-----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~  156 (392)
                        .|++...     ..++-.++..+++.++.||.++|.+|| ||||+||+|+|.+.. +.-.|.|||++.
T Consensus       113 vlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GI-vHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  113 VLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGI-VHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             EecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCc-cccCCCccccccccccCCceEEechhHH
Confidence              1111100     047788999999999999999999999 999999999999765 678999999998

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.54  E-value=1.1e-14  Score=129.59  Aligned_cols=132  Identities=12%  Similarity=0.086  Sum_probs=92.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHH---H------HHHHHHHH-------------HH-h-
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDIT---R------AMKKELKI-------------DI-M-   97 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~---~------~~~~E~~~-------------~~-l-   97 (392)
                      .+..|...+.+|+|+||.||+...  +++.+|||.++.......   +      .+.+|+..             ++ . 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            467788899999999999999643  577899999975433211   1      14666553             11 0 


Q ss_pred             ----------------hcCC-cCCCHH--HHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          98 ----------------ENED-VKLDNM--FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        98 ----------------~~~~-~~l~~~--~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                      +.-. ..+...  .......+++.++..+|+.|+ +|||+||+||+++++| ++++|||.+...
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi-~H~Dikp~Nili~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGM-VSGDPHKGNFIVSKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCC-ccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence                            0000 011110  002346799999999999999 9999999999999988 999999988755


Q ss_pred             cccc-----------cccccccceeeeeee
Q psy6828         159 RDAE-----------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~-----------~~~~d~~s~g~~~~~  177 (392)
                      ....           ....|+|++|..+..
T Consensus       185 ~e~~a~d~~vler~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        185 AQRKAKDRIDLERHYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             cchhhHHHHHHHhHhcccccccceeEeehH
Confidence            3222           124599999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.52  E-value=7.2e-14  Score=125.82  Aligned_cols=120  Identities=27%  Similarity=0.398  Sum_probs=96.3

Q ss_pred             ceeEEEEEEEeecCcEEEEEEcCCCChhH-HHHHHHHHHH-----------------------------------HHhhc
Q psy6828          56 RYSAIFTPIGIYKGRIFAIKRIPKKSVDI-TRAMKKELKI-----------------------------------DIMEN   99 (392)
Q Consensus        56 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~-----------------------------------~~l~~   99 (392)
                      +||.||++....+++.+|+|.+....... .+.+.+|+..                                   +++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999988889999999998765433 5677777765                                   22222


Q ss_pred             CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------------
Q psy6828         100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----------------  162 (392)
Q Consensus       100 ~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----------------  162 (392)
                      .. .+++..+..++.+++.++.|||+.++ +|+||+|+||++++++.++++|||.+.......                 
T Consensus        81 ~~-~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~  158 (244)
T smart00220       81 RG-RLSEDEARFYARQILSALEYLHSNGI-IHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVL  158 (244)
T ss_pred             cc-CCCHHHHHHHHHHHHHHHHHHHHcCe-ecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHH
Confidence            11 27889999999999999999999999 999999999999999999999999987654321                 


Q ss_pred             -----cccccccceeeeeee
Q psy6828         163 -----YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----~~~~d~~s~g~~~~~  177 (392)
                           ....|+|++|+++|+
T Consensus       159 ~~~~~~~~~Di~slG~~l~~  178 (244)
T smart00220      159 LGKGYGKAVDVWSLGVILYE  178 (244)
T ss_pred             ccCCCCchhhHHHHHHHHHH
Confidence                 113488888888887

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.49  E-value=1.2e-13  Score=121.79  Aligned_cols=113  Identities=16%  Similarity=0.165  Sum_probs=80.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh----------------------HHHHHHHHHHH---------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD----------------------ITRAMKKELKI---------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----------------------~~~~~~~E~~~---------   94 (392)
                      +...++||+|+||.||++... +|+.||||+++.....                      ......+|..+         
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            444678999999999999864 7999999987643210                      00113334333         


Q ss_pred             ---------------HHhhcCCc-CCCH-HHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------------DIMENEDV-KLDN-MFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------------~~l~~~~~-~l~~-~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                     +++..... .+.. .....++.+++.++.++|+.++ +||||||+||+++.++.++|+|||.+..
T Consensus        96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi-~H~Dl~p~Nill~~~~~~~liDfg~~~~  174 (198)
T cd05144          96 PVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGI-IHGDLSEFNILVDDDEKIYIIDWPQMVS  174 (198)
T ss_pred             CCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCC-CcCCCCcccEEEcCCCcEEEEECCcccc
Confidence                           11111110 1112 4456788999999999999999 9999999999999999999999999865


Q ss_pred             ccc
Q psy6828         158 KRD  160 (392)
Q Consensus       158 ~~~  160 (392)
                      ...
T Consensus       175 ~~~  177 (198)
T cd05144         175 TDH  177 (198)
T ss_pred             CCC
Confidence            543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK10345 hypothetical protein; Provisional

Probab=99.48  E-value=1.5e-13  Score=121.60  Aligned_cols=101  Identities=19%  Similarity=0.279  Sum_probs=73.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      ...||+|+||.||.  ++.++.. +||++........+.+.+|+.+                                  
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            56799999999995  6777666 6999876544445667777766                                  


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHH-HHHhcCCcccccCCCCCceEEcCC----ceEEEec-cccch
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGM-LYLHDSALRYHGNLKASNCLVDSR----WVVKLAD-FGLTE  156 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l-~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~D-FGla~  156 (392)
                                  +++++.  .+++.  ..++.|++.++ .|||+++| +||||||+|||++..    +.++|+| ||...
T Consensus        84 ~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~I-vhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRI-VTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             ecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence                        111111  23333  35678888888 89999999 999999999999743    4799999 55443


Q ss_pred             h
Q psy6828         157 F  157 (392)
Q Consensus       157 ~  157 (392)
                      .
T Consensus       159 ~  159 (210)
T PRK10345        159 F  159 (210)
T ss_pred             e
Confidence            3

>KOG0576|consensus

Probab=99.47  E-value=1.1e-14  Score=142.06  Aligned_cols=135  Identities=19%  Similarity=0.240  Sum_probs=104.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------HHhhc-----------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------DIMEN-----------   99 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------~~l~~-----------   99 (392)
                      -|...-.+|.|+||.||+++++.+++..|+|.++-..-....-+++|+.+              .|+++           
T Consensus        16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg   95 (829)
T KOG0576|consen   16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG   95 (829)
T ss_pred             chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence            34455579999999999999999999999999975544444445555544              23322           


Q ss_pred             -CC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-------
Q psy6828         100 -ED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-------  163 (392)
Q Consensus       100 -~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------  163 (392)
                       ++        +.+++.++....++.+.||.|||+.+- +|||||-.|||+++.|.+|++|||.+..++....       
T Consensus        96 ggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk-~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiG  174 (829)
T KOG0576|consen   96 GGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGK-IHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIG  174 (829)
T ss_pred             CCcccceeeecccchhHHHHHHHhhhhccchhhhcCCc-ccccccccceeecccCceeecccCchhhhhhhhhhhhcccC
Confidence             11        169999999999999999999999999 9999999999999999999999999875432111       


Q ss_pred             -------------------ccccccceeeeeeeccC
Q psy6828         164 -------------------TGTDQHSFLQHTYHVNR  180 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~~~~  180 (392)
                                         ...|+|+.|.+..|..+
T Consensus       175 tpywmapEvaaverkggynqlcdiwa~gitAiel~e  210 (829)
T KOG0576|consen  175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE  210 (829)
T ss_pred             CccccchhHHHHHhcccccccccccccccchhhhhh
Confidence                               12389999988777433

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.47  E-value=6.7e-14  Score=151.93  Aligned_cols=128  Identities=18%  Similarity=0.193  Sum_probs=90.1

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHH--HHHHHH--------------------HHhhcCCc---
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAM--KKELKI--------------------DIMENEDV---  102 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~--~~E~~~--------------------~~l~~~~~---  102 (392)
                      ..+.+|+|+||.||+|.+..+++.||||.+........+.+  .+.+..                    +|+.++..   
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~  773 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEV  773 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHH
Confidence            35679999999999999989999999999975432111111  111111                    34433322   


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHh---cCCcccccCCCCCceEEcCCceEEEeccccchhccc-----------------
Q psy6828         103 --KLDNMFIASLVADILRGMLYLH---DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD-----------------  160 (392)
Q Consensus       103 --~l~~~~~~~i~~qi~~~l~ylH---~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~-----------------  160 (392)
                        .+++.+...++.|++.||.|||   +.++ +||||||+||+++.++..++. ||.......                 
T Consensus       774 l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~  851 (968)
T PLN00113        774 LRNLSWERRRKIAIGIAKALRFLHCRCSPAV-VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRE  851 (968)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHhccCCCCCe-ecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCccccc
Confidence              3789999999999999999999   5678 999999999999988877665 544332111                 


Q ss_pred             --cccccccccceeeeeee
Q psy6828         161 --AEYTGTDQHSFLQHTYH  177 (392)
Q Consensus       161 --~~~~~~d~~s~g~~~~~  177 (392)
                        ......|+||||+++||
T Consensus       852 ~~~~~~~sDv~S~Gvvl~e  870 (968)
T PLN00113        852 TKDITEKSDIYGFGLILIE  870 (968)
T ss_pred             CCCCCcccchhhHHHHHHH
Confidence              11223588888888887

>KOG1164|consensus

Probab=99.46  E-value=1.8e-13  Score=130.05  Aligned_cols=112  Identities=19%  Similarity=0.214  Sum_probs=85.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecC-cEEEEEEcCCCChh------HHHHHHHHHHH-----------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIPKKSVD------ITRAMKKELKI-----------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~~------~~~~~~~E~~~-----------------------   94 (392)
                      .|...+.||+|+||.||.+.+..++ +.+|+|........      ....+...+..                       
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            5777889999999999999987774 68899987653211      11122222220                       


Q ss_pred             ----------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-----ceEEEeccccchh
Q psy6828          95 ----------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-----WVVKLADFGLTEF  157 (392)
Q Consensus        95 ----------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-----~~~kl~DFGla~~  157 (392)
                                ++.. .....++...+..++.|++.+|+++|+.|+ +||||||+|+++...     ..+.+.|||+++.
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~-iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGF-IHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCc-ccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence                      3332 223579999999999999999999999999 999999999999765     4699999999983

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.44  E-value=2.8e-13  Score=118.23  Aligned_cols=108  Identities=20%  Similarity=0.195  Sum_probs=77.5

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHH----------------------HHHHHH-----------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAM----------------------KKELKI-----------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~----------------------~~E~~~-----------   94 (392)
                      +.||+|+||.||++.+. +++.||||+++.....  .....                      ..|...           
T Consensus         3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999876 8999999998653221  10100                      122211           


Q ss_pred             -------------HHhhcCC---cCC---CH-HHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 -------------DIMENED---VKL---DN-MFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 -------------~~l~~~~---~~l---~~-~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                                   +++....   ..+   .. .++..++.+++.++.++|+ .++ +||||||+||+++ ++.++++|||
T Consensus        82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~i-vH~Dl~p~Nili~-~~~~~liDfg  159 (187)
T cd05119          82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGL-VHGDLSEYNILVD-DGKVYIIDVP  159 (187)
T ss_pred             CceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCc-CcCCCChhhEEEE-CCcEEEEECc
Confidence                         1111100   011   11 5678899999999999999 999 9999999999999 8999999999


Q ss_pred             cchhccc
Q psy6828         154 LTEFKRD  160 (392)
Q Consensus       154 la~~~~~  160 (392)
                      .+.....
T Consensus       160 ~a~~~~~  166 (187)
T cd05119         160 QAVEIDH  166 (187)
T ss_pred             ccccccC
Confidence            9975544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.42  E-value=7.2e-13  Score=115.72  Aligned_cols=107  Identities=17%  Similarity=0.143  Sum_probs=78.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh----HHHHHHHHHHH-----------------------HHhhcCC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD----ITRAMKKELKI-----------------------DIMENED  101 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~~E~~~-----------------------~~l~~~~  101 (392)
                      ...|++|+||+||++..  .+.+++.+.+......    ....+.+|+.+                       +++....
T Consensus         7 ~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~   84 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAA   84 (218)
T ss_pred             ceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCcc
Confidence            44689999999997754  6888888877654331    12257788887                       2222211


Q ss_pred             c--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCC-CCCceEEcCCceEEEeccccchhcc
Q psy6828         102 V--KLDNMFIASLVADILRGMLYLHDSALRYHGNL-KASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       102 ~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl-Kp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      +  ..+. ....++.|++.+|.++|++|+ +|||| ||+|||++.++.++|+|||++....
T Consensus        85 L~~~~~~-~~~~~~~qi~~~L~~lH~~GI-vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         85 MYQRPPR-GDLAYFRAARRLLQQLHRCGV-AHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             HHhhhhh-hhHHHHHHHHHHHHHHHHCcC-ccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            1  0111 234678999999999999999 99999 7999999999999999999997543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=1.3e-12  Score=116.32  Aligned_cols=104  Identities=25%  Similarity=0.228  Sum_probs=76.4

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------HHHHHHHHHHH--------------------------H
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------ITRAMKKELKI--------------------------D   95 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~--------------------------~   95 (392)
                      +.||+|++|.||+|..  +|..+++|........        ....+.+|..+                          +
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            4689999999999975  7889999986543211        12345556555                          1


Q ss_pred             HhhcCCc-----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          96 IMENEDV-----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        96 ~l~~~~~-----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      ++.....     .... +...++.+++.+|.++|+.++ +|+|++|+|||++ ++.++++|||+++..
T Consensus        80 ~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i-~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         80 YIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGI-IHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             EeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCc-ccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            1111110     0111 456889999999999999999 9999999999999 788999999998764

>KOG1290|consensus

Probab=99.39  E-value=1.7e-12  Score=123.06  Aligned_cols=100  Identities=20%  Similarity=0.260  Sum_probs=82.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..+|...+.||=|-|++||+|.+..+.+.||+|+.+.. ..-++....|+.+                            
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            48999999999999999999999999999999998543 3456677788877                            


Q ss_pred             ------------------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCC
Q psy6828          95 ------------------DIME-NEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ------------------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~  144 (392)
                                        .+++ .....++-..++.|++|++.||.|||. ++| ||-||||+|||+..+
T Consensus       156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgI-IHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGI-IHTDLKPENVLLCST  224 (590)
T ss_pred             CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCc-cccCCCcceeeeecc
Confidence                              1111 122248889999999999999999996 677 999999999999554

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.38  E-value=9.4e-13  Score=116.08  Aligned_cols=104  Identities=23%  Similarity=0.257  Sum_probs=75.2

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH-HHhhcC----------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI-DIMENE----------------------  100 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~-~~l~~~----------------------  100 (392)
                      ||+|+||.||++.  .++..+++|.......        ...+++.+|..+ ..+...                      
T Consensus         2 ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         2 IAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            7999999999997  5688999998654321        112455666665 111100                      


Q ss_pred             -CcCCCHHHHH---HHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         101 -DVKLDNMFIA---SLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       101 -~~~l~~~~~~---~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                       +..+.+....   .++.|++.+|.++|+.++ +|+|+||.||+++ ++.++++|||+++...
T Consensus        80 ~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi-~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        80 EGKPLKDVIEEGNDELLREIGRLVGKLHKAGI-VHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCe-ecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence             0112211111   789999999999999999 9999999999999 8899999999987643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.37  E-value=1.2e-12  Score=132.71  Aligned_cols=120  Identities=21%  Similarity=0.265  Sum_probs=83.2

Q ss_pred             eccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH-----------
Q psy6828          34 CSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI-----------   94 (392)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~-----------   94 (392)
                      ..|.........+...+.||+|+||.||++...  +..+++|+......        ...+++.+|..+           
T Consensus       323 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~  400 (535)
T PRK09605        323 VTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPT  400 (535)
T ss_pred             eeeccccccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCe
Confidence            345555555555667889999999999998743  44445444322111        123456777766           


Q ss_pred             ---------------HHhhcCCcCCCHH--HHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------------DIMENEDVKLDNM--FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~--~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                     +++...  .+.+.  ....++.|++.+|.|||+.++ +||||||+|||+ .++.++|+|||+++.
T Consensus       401 p~~~~~~~~~~~lv~E~~~g~--~L~~~l~~~~~~~~~i~~~L~~lH~~gi-iHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        401 PVIYDVDPEEKTIVMEYIGGK--DLKDVLEGNPELVRKVGEIVAKLHKAGI-VHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             eEEEEEeCCCCEEEEEecCCC--cHHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCChHHEEE-ECCcEEEEeCccccc
Confidence                           111111  12221  256788999999999999999 999999999999 678899999999987


Q ss_pred             cc
Q psy6828         158 KR  159 (392)
Q Consensus       158 ~~  159 (392)
                      ..
T Consensus       477 ~~  478 (535)
T PRK09605        477 SD  478 (535)
T ss_pred             CC
Confidence            54

>KOG1024|consensus

Probab=99.34  E-value=5.3e-13  Score=123.29  Aligned_cols=197  Identities=16%  Similarity=0.181  Sum_probs=130.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCC-ChhHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKK-SVDITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~-~~~~~~~~~~E~~~-----------------------   94 (392)
                      .+......+-+|+||.||.|....     +.+.|-+|.++.. +.-+...+..|...                       
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P  363 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP  363 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence            334556678899999999996543     2345667776543 22344556666555                       


Q ss_pred             -------------HHhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 -------------DIMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 -------------~~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                   .|+..       ....++..+...++.|++.|+.|||+.++ ||.||...|++|++.-++||+|=.+
T Consensus       364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~V-iHkDiAaRNCvIdd~LqVkltDsaL  442 (563)
T KOG1024|consen  364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV-IHKDIAARNCVIDDQLQVKLTDSAL  442 (563)
T ss_pred             eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCc-ccchhhhhcceehhheeEEeccchh
Confidence                         34431       11247888899999999999999999999 9999999999999999999999999


Q ss_pred             chhcccccc-------------------------ccccccceeeeeee---ccCCCCcccccccccchhhhccCCHHHHH
Q psy6828         155 TEFKRDAEY-------------------------TGTDQHSFLQHTYH---VNRAGSTESLHCKCDEALLFEMLPRSVAE  206 (392)
Q Consensus       155 a~~~~~~~~-------------------------~~~d~~s~g~~~~~---~~~~~~~~~~d~~~~~~lL~~~lp~~v~~  206 (392)
                      ++-+....+                         ...|+||||+++||   ..+.++.+             +-|.++..
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-------------IDPfEm~~  509 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-------------IDPFEMEH  509 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-------------cCHHHHHH
Confidence            986543221                         12399999999999   33444443             44666666


Q ss_pred             HhhcCCCccccccC---ceEEEeecccchhhh-hccCChhhHHHhHHHHHHHHHH
Q psy6828         207 QLRRGTSVEAESFD---SVTIYFSDIVGFTAM-SAESTPLQVVDFLNDLYTCFDS  257 (392)
Q Consensus       207 ~l~~~~~~~~~~~~---~vtvlf~DI~~ft~l-~~~~~p~~l~~~Ln~~~~~~~~  257 (392)
                      .++++-.+..+.-.   -.++|.+-   +.-+ .++.+-+++..-|.+|+..+.+
T Consensus       510 ylkdGyRlaQP~NCPDeLf~vMacC---WallpeeRPsf~Qlv~cLseF~~qlt~  561 (563)
T KOG1024|consen  510 YLKDGYRLAQPFNCPDELFTVMACC---WALLPEERPSFSQLVICLSEFHTQLTR  561 (563)
T ss_pred             HHhccceecCCCCCcHHHHHHHHHH---HhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence            66665433222100   01121111   1111 2445667788888888876654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.28  E-value=4.9e-12  Score=134.34  Aligned_cols=61  Identities=16%  Similarity=0.180  Sum_probs=50.8

Q ss_pred             HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-------------------CceEEEeccccch
Q psy6828          96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-------------------RWVVKLADFGLTE  156 (392)
Q Consensus        96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-------------------~~~~kl~DFGla~  156 (392)
                      ++......+++.++..+++||+.||.|||+++| +||||||+|||++.                   ++.+|++|||+++
T Consensus        69 ~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gI-vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~  147 (793)
T PLN00181         69 WLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGI-VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSR  147 (793)
T ss_pred             HHhcccccccHHHHHHHHHHHHHHHHHHHhCCe-eeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccc
Confidence            343434469999999999999999999999999 99999999999954                   4567788888775


Q ss_pred             h
Q psy6828         157 F  157 (392)
Q Consensus       157 ~  157 (392)
                      .
T Consensus       148 ~  148 (793)
T PLN00181        148 R  148 (793)
T ss_pred             c
Confidence            3

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.25  E-value=1.1e-11  Score=113.63  Aligned_cols=110  Identities=23%  Similarity=0.230  Sum_probs=76.6

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------   94 (392)
                      ...+.||.|+++.||.+++..||+.+|+|+......   ...+.+.+|...                             
T Consensus        15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~   94 (288)
T PF14531_consen   15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP   94 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred             EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence            447789999999999999999999999998853322   345555555533                             


Q ss_pred             -----------------------------------HHhhcCCcC---CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCC
Q psy6828          95 -----------------------------------DIMENEDVK---LDNMFIASLVADILRGMLYLHDSALRYHGNLKA  136 (392)
Q Consensus        95 -----------------------------------~~l~~~~~~---l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp  136 (392)
                                                         +.+......   +....-..+..|++..+.+||+.|+ +|+||||
T Consensus        95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl-VHgdi~~  173 (288)
T PF14531_consen   95 GKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL-VHGDIKP  173 (288)
T ss_dssp             TS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE-EEST-SG
T ss_pred             CCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce-Eecccce
Confidence                                               111111101   1112224556899999999999999 9999999


Q ss_pred             CceEEcCCceEEEeccccchh
Q psy6828         137 SNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       137 ~NIll~~~~~~kl~DFGla~~  157 (392)
                      +|++++.+|.++|+||+....
T Consensus       174 ~nfll~~~G~v~Lg~F~~~~r  194 (288)
T PF14531_consen  174 ENFLLDQDGGVFLGDFSSLVR  194 (288)
T ss_dssp             GGEEE-TTS-EEE--GGGEEE
T ss_pred             eeEEEcCCCCEEEcChHHHee
Confidence            999999999999999987653

>KOG1166|consensus

Probab=99.24  E-value=3.1e-11  Score=125.83  Aligned_cols=161  Identities=18%  Similarity=0.197  Sum_probs=107.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-------hHHHHHHHHHHH---------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-------DITRAMKKELKI---------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~---------------------   94 (392)
                      ...+-....+|+|+||+||+|.+.. |+.||+|+=+....       +..+++.-++..                     
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey  775 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY  775 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence            4445667789999999999999776 99999999876542       233333311000                     


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-------ceEEEeccccchhcc-
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-------WVVKLADFGLTEFKR-  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-------~~~kl~DFGla~~~~-  159 (392)
                             ++++ .....+|.-++.+..|++.-+..||..+| ||+||||+|.||...       ..++|+|||.+--+. 
T Consensus       776 ~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~I-IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l  853 (974)
T KOG1166|consen  776 SPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGI-IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL  853 (974)
T ss_pred             cccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcce-ecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence                   4444 44479999999999999999999999999 999999999999532       458999999886432 


Q ss_pred             --ccccccccccceeeeeeeccC-CCCcccccccccchhhhccCCHHHHH
Q psy6828         160 --DAEYTGTDQHSFLQHTYHVNR-AGSTESLHCKCDEALLFEMLPRSVAE  206 (392)
Q Consensus       160 --~~~~~~~d~~s~g~~~~~~~~-~~~~~~~d~~~~~~lL~~~lp~~v~~  206 (392)
                        +...-......=+.-.+|.+. .+++-.+|+.-....+.-||-+...+
T Consensus       854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q  903 (974)
T KOG1166|consen  854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME  903 (974)
T ss_pred             cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Confidence              111101110001112233222 44455566666666777777766666

>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases

Probab=99.21  E-value=6.1e-10  Score=90.97  Aligned_cols=130  Identities=42%  Similarity=0.678  Sum_probs=111.3

Q ss_pred             eEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeec
Q psy6828         222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETI  301 (392)
Q Consensus       222 vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~  301 (392)
                      +++++.||.+|+.+.+....+...++|..+.+.+.+.+..+++.+..+.||.++++|..                     
T Consensus         2 ~~ll~i~i~~~~~i~~~~g~~~~~~~l~~~~~~l~~~~~~~~~~~~r~~~d~f~~l~~~---------------------   60 (133)
T cd07556           2 VTILFADIVGFTSLADALGPDEGDELLNELAGRFDSLIRRSGDLKIKTIGDEFMVVSGL---------------------   60 (133)
T ss_pred             EEEEEEEchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEeecceEEEEECc---------------------
Confidence            57899999999999999999999999999999999999998899999999999877631                     


Q ss_pred             cceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHH
Q psy6828         302 GDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTAS  381 (392)
Q Consensus       302 ~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~As  381 (392)
                                      ....++..++.++.+.+......  ....++++||++.|++..+..|. +..+..+|+.+|.|+
T Consensus        61 ----------------~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~ig~~~g~~~~~~~~~-~~~~~~~~~~~~~a~  121 (133)
T cd07556          61 ----------------DHPAAAVAFAEDMREAVSALNQS--EGNPVRVRIGIHTGPVVVGVIGS-RPQYDVWGALVNLAS  121 (133)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEEEecccEEEEeccC-CccceEEcHHHHHHH
Confidence                            14566777888888887664321  34568999999999999999998 668999999999999


Q ss_pred             hhhhcCCCCC
Q psy6828         382 RMESTGEDVV  391 (392)
Q Consensus       382 Rle~~~~~g~  391 (392)
                      ++.+.++++.
T Consensus       122 ~a~~~a~~~~  131 (133)
T cd07556         122 RMESQAKAGQ  131 (133)
T ss_pred             HHHhcCCCCC
Confidence            9999999874

Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.20  E-value=9.9e-11  Score=106.19  Aligned_cols=47  Identities=30%  Similarity=0.392  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      .+.|++.++.+||++|+ +||||||+|||++.++.++|+|||.++...
T Consensus       147 ~~~~i~~~l~~lH~~GI-~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        147 QWQAIGQLIARFHDAGV-YHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHHHHHHHHHHHHHCCC-CCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            46789999999999999 999999999999998999999999987654

>KOG0590|consensus

Probab=99.16  E-value=2.8e-11  Score=123.07  Aligned_cols=110  Identities=22%  Similarity=0.279  Sum_probs=80.3

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC---ChhHHHH---HHHHHHH--------------------------H
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK---SVDITRA---MKKELKI--------------------------D   95 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~---~~~E~~~--------------------------~   95 (392)
                      ..+.+|.|++|.|+........+.++.|.....   .....+.   +..|..+                          +
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            477899999999998887777776666655311   1111111   1112111                          1


Q ss_pred             Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          96 IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        96 ~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      |...       ....++..++..+++|++.|+.|+|+.|+ .|||+||+|+++..+|.+||+|||.+...
T Consensus       402 ~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi-ahrdlK~enll~~~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  402 YCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL-AHRDLKLENLLVTENGILKIIDFGAASVF  470 (601)
T ss_pred             cccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc-eeccCccccEEEecCCceEEeecCcceee
Confidence            1111       12258889999999999999999999999 99999999999999999999999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.12  E-value=3.5e-10  Score=105.59  Aligned_cols=129  Identities=24%  Similarity=0.334  Sum_probs=97.6

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~------------------------------   94 (392)
                      ....+|.|+|+.||.+.+.   ..+++|.+......   ....+.+|...                              
T Consensus         4 ~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   80 (384)
T COG0515           4 ILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV   80 (384)
T ss_pred             eEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence            3456889999999999877   88999999765432   35667777764                              


Q ss_pred             ------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcccccccc
Q psy6828          95 ------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAEYTG  165 (392)
Q Consensus        95 ------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~~~~  165 (392)
                            +++....  ..++......++.|++.++.|+|+.++ +|||+||+||+++..+ .++++|||+++.........
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~-~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  159 (384)
T COG0515          81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGI-IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS  159 (384)
T ss_pred             CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence                  2222222  258889999999999999999999999 9999999999999988 79999999998554433221


Q ss_pred             ----ccccceeeeeeeccC
Q psy6828         166 ----TDQHSFLQHTYHVNR  180 (392)
Q Consensus       166 ----~d~~s~g~~~~~~~~  180 (392)
                          ......|...|..|+
T Consensus       160 ~~~~~~~~~~~t~~~~~pe  178 (384)
T COG0515         160 SIPALPSTSVGTPGYMAPE  178 (384)
T ss_pred             cccccccccccccccCCHH
Confidence                224445666676555

>KOG4158|consensus

Probab=99.09  E-value=7.4e-10  Score=103.08  Aligned_cols=52  Identities=25%  Similarity=0.320  Sum_probs=45.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CC--ceEEEeccccch
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SR--WVVKLADFGLTE  156 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~--~~~kl~DFGla~  156 (392)
                      .+.....-++.|+++|+.|||.+|+ .|||+|++|||+.  ++  -.+.++|||++-
T Consensus       338 ~s~r~~~~~laQlLEav~hL~~hgv-AhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  338 RSYRTGRVILAQLLEAVTHLHKHGV-AHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHccc-hhhcccccceEEEecCCCCcEEEEcccceee
Confidence            6677778899999999999999999 9999999999993  33  358899999874

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.09  E-value=6.6e-10  Score=92.45  Aligned_cols=105  Identities=16%  Similarity=0.232  Sum_probs=77.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HHhhcC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DIMENE  100 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~l~~~  100 (392)
                      .+.+|+|.++.||++...  +..+++|.......  ...+.+|...                            +++...
T Consensus         3 ~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             ceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            356899999999999864  47899999876542  2334444444                            111111


Q ss_pred             Cc-CCCHHHHHHHHHHHHHHHHHHhcC---CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         101 DV-KLDNMFIASLVADILRGMLYLHDS---ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       101 ~~-~l~~~~~~~i~~qi~~~l~ylH~~---~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .. .++......++.+++.++.++|..   ++ +|+|+||+||++++.+.++++|||.++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i-~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          79 TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVL-CHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHHHhCCCceEE-EecCCCcceEEEECCcEEEEEecccccCC
Confidence            10 123466778899999999999985   57 99999999999999899999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.07  E-value=1.1e-10  Score=100.67  Aligned_cols=73  Identities=27%  Similarity=0.269  Sum_probs=57.2

Q ss_pred             HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------------
Q psy6828          96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------------  162 (392)
Q Consensus        96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------------  162 (392)
                      ++......+++.++..++.|++.||.|||+++       ||+|||++.++.+|+  ||+++......             
T Consensus         6 ~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~aPE~~   76 (176)
T smart00750        6 ILEVRGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFMAPEVI   76 (176)
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeeccccCCCcccccChHHh
Confidence            44443446999999999999999999999876       999999999999999  99987643321             


Q ss_pred             -----cccccccceeeeeee
Q psy6828         163 -----YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----~~~~d~~s~g~~~~~  177 (392)
                           ....|+||+|+++|+
T Consensus        77 ~~~~~~~~~DiwSlG~il~e   96 (176)
T smart00750       77 QGQSYTEKADIYSLGITLYE   96 (176)
T ss_pred             cCCCCcchhhHHHHHHHHHH
Confidence                 112377777777776

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.06  E-value=6.4e-10  Score=109.58  Aligned_cols=49  Identities=18%  Similarity=0.291  Sum_probs=41.4

Q ss_pred             HHHHHHHH-HHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828         111 SLVADILR-GMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus       111 ~i~~qi~~-~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                      .++.+++. .+..+|..|+ +|+|+||.||+++.++.++++|||++.....
T Consensus       260 ~ia~~~~~~~l~ql~~~g~-~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       260 ALAENLARSFLNQVLRDGF-FHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHHHHHHHHHHHhCCc-eeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            45555555 3678899999 9999999999999999999999999877654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0606|consensus

Probab=99.04  E-value=9.8e-11  Score=120.52  Aligned_cols=96  Identities=27%  Similarity=0.387  Sum_probs=71.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------HHhhcCCcCCCHHHHHHHHHHH
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------DIMENEDVKLDNMFIASLVADI  116 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------~~l~~~~~~l~~~~~~~i~~qi  116 (392)
                      ..+.+..|+||.||..+|+.+.+.+|+ +++++.+-..+    ++..           ..+++.. .++        .++
T Consensus        87 ~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRn----ilt~a~npfvvgDc~tllk~~g-~lP--------vdm  152 (1205)
T KOG0606|consen   87 TIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRN----ILTFAGNPFVVGDCATLLKNIG-PLP--------VDM  152 (1205)
T ss_pred             eeEeeccCCCCceeeeeccccccchhh-cccccchhhhc----cccccCCcceechhhhhcccCC-CCc--------chh
Confidence            355688999999999999999999999 55554432111    1110           2222221 122        133


Q ss_pred             HHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         117 LRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       117 ~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +.+++|+|+.+| +|||+||+|.+++.-|++|+.|||+++..
T Consensus       153 vla~Eylh~ygi-vhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  153 VLAVEYLHSYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             hHHhHhhccCCe-ecCCCCCCcceeeecccccccchhhhhhh
Confidence            788999999999 99999999999999999999999999863

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.98  E-value=1e-09  Score=109.63  Aligned_cols=38  Identities=16%  Similarity=0.285  Sum_probs=32.9

Q ss_pred             HhcCCcccccCCCCCceEEcCCc----eEEEeccccchhcccc
Q psy6828         123 LHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTEFKRDA  161 (392)
Q Consensus       123 lH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~~~~~~  161 (392)
                      ++..|+ +|+|+||.||+++.++    .++++|||++...+..
T Consensus       276 if~~Gf-fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        276 VFRDGF-FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHhCCe-eeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            345899 9999999999999888    9999999999876543

>KOG0603|consensus

Probab=98.98  E-value=7.4e-11  Score=115.61  Aligned_cols=125  Identities=22%  Similarity=0.280  Sum_probs=93.0

Q ss_pred             CCCcceeEEEEEEE---eecCcEEEEEEcCCCChh--------HHHHHHHHHHH---------------------HHhhc
Q psy6828          52 DSDFRYSAIFTPIG---IYKGRIFAIKRIPKKSVD--------ITRAMKKELKI---------------------DIMEN   99 (392)
Q Consensus        52 lg~G~~g~V~~~~~---~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~---------------------~~l~~   99 (392)
                      +|+|+||.|+++..   ...|..||+|.+.+....        ..+.+..++..                     +++.+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            79999999998763   345678999998765431        11122222221                     33333


Q ss_pred             CC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828         100 ED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--------  163 (392)
Q Consensus       100 ~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--------  163 (392)
                      +.        ..+++.....+..+++.++.++|+.++ +|||+|++||+++.+|++|+.|||+++..-....        
T Consensus        82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~i-iyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym  160 (612)
T KOG0603|consen   82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGI-AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR  160 (612)
T ss_pred             chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHH-HHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence            21        147888889999999999999999999 9999999999999999999999999986433221        


Q ss_pred             ---------ccccccceeeeeee
Q psy6828         164 ---------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------~~~d~~s~g~~~~~  177 (392)
                               ...|.||||++.++
T Consensus       161 ApEI~~gh~~a~D~ws~gvl~fe  183 (612)
T KOG0603|consen  161 APEIINGHLSAADWWSFGVLAFE  183 (612)
T ss_pred             hhHhhhccCCcccchhhhhhHHH
Confidence                     12399999999998

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.90  E-value=4.2e-09  Score=90.10  Aligned_cols=103  Identities=16%  Similarity=0.128  Sum_probs=72.1

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------HHhhcCCcC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------DIMENEDVK  103 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------~~l~~~~~~  103 (392)
                      .++++.|.++.||++..  .++.|++|........ ...+.+|..+                         +++....  
T Consensus         3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~--   77 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL-LINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSE--   77 (170)
T ss_pred             eeecCCcccCceEEEEE--CCeEEEEEeCCCCccc-ccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCc--
Confidence            35789999999999974  4889999998655311 1123344433                         2222221  


Q ss_pred             CCH--HHHHHHHHHHHHHHHHHhcCCc----ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         104 LDN--MFIASLVADILRGMLYLHDSAL----RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       104 l~~--~~~~~i~~qi~~~l~ylH~~~i----iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +..  .....++.+++.+|..||+.++    ++|+|++|.||+++ ++.++++||+.+..
T Consensus        78 l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          78 LLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            211  2234567899999999998773    39999999999998 67899999998774

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1240|consensus

Probab=98.85  E-value=1.1e-09  Score=113.19  Aligned_cols=106  Identities=16%  Similarity=0.170  Sum_probs=77.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----hHHHHHHHHHHH-------------------------HHhh
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----DITRAMKKELKI-------------------------DIME   98 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~-------------------------~~l~   98 (392)
                      -.+.||.+.|=+|.+|.+.  ...|+||++-+...    ...++-..|++.                         .|++
T Consensus        27 ~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk  104 (1431)
T KOG1240|consen   27 YVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK  104 (1431)
T ss_pred             eecccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence            3667999999999999754  33499999876542    222333333333                         2221


Q ss_pred             c-----CCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          99 N-----EDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        99 ~-----~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      +     -+.  -+...+.+.|+-|++.||.-+|..|| .|+|||.+|||+++=..+.|+||..-+
T Consensus       105 hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gV-cHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen  105 HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGV-CHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCc-cccccccceEEEeeechhhhhcccccC
Confidence            1     010  25666778899999999999999999 999999999999998889999997654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.74  E-value=6e-08  Score=84.59  Aligned_cols=53  Identities=21%  Similarity=0.160  Sum_probs=45.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHH-hcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         104 LDNMFIASLVADILRGMLYL-HDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~yl-H~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +++.+...++.|++.+|..+ |+.++ +|+||+|.|||++ ++.+.++|||-+-..
T Consensus       121 ~~~~~~~~i~~~i~~~l~~l~H~~gl-VHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         121 LNDEEMKNAYYQVLSMMKQLYKECNL-VHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            45556778889999999998 89999 9999999999996 468999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1033|consensus

Probab=98.69  E-value=4.1e-09  Score=101.64  Aligned_cols=95  Identities=20%  Similarity=0.252  Sum_probs=72.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----cccccccceeeeeeec
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----YTGTDQHSFLQHTYHV  178 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----~~~~d~~s~g~~~~~~  178 (392)
                      ..+......++.|+..|+.|   ++. +|||+||.||+...+..+||.|||+........    ....-.-..|..+|+.
T Consensus       355 ~~s~s~~~~~~~q~~~~~~y---k~~-ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms  430 (516)
T KOG1033|consen  355 ERSLSLMLDIFKQIAPAVEY---KGL-IHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS  430 (516)
T ss_pred             ccchhHHHHHHHhhccchhh---ccc-hhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCC
Confidence            35666788999999999999   888 999999999999999999999999987655444    1111233468888886


Q ss_pred             cC----CCCcccccccccchhhhccCC
Q psy6828         179 NR----AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       179 ~~----~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      |+    ..+.+++|+..++-+|...+-
T Consensus       431 PEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  431 PEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             HHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            65    456667777777777776654

>KOG3087|consensus

Probab=98.48  E-value=1.6e-06  Score=73.53  Aligned_cols=120  Identities=24%  Similarity=0.224  Sum_probs=82.9

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH--------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI--------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~--------------------------   94 (392)
                      ...+-+|+-+.|+.+.  ..|+...||.-..+..        -...+..+|...                          
T Consensus        12 l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             ceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            3456688888888885  5699988886543321        123456667666                          


Q ss_pred             ----------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccchhccc
Q psy6828          95 ----------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~~~~~  160 (392)
                                +++. ..+.....+....++++|-+.+.-||..++ +|+||..+||++.+++.   +.++|||++.....
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi-iHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~  168 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI-IHGDLTTSNILLRSDGNQITPILIDFGLSSVSRL  168 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe-ecccccccceEEecCCCcCceEEEeecchhcccC
Confidence                      1111 111122333336788889899999999999 99999999999977653   58999999987766


Q ss_pred             cccccccccce
Q psy6828         161 AEYTGTDQHSF  171 (392)
Q Consensus       161 ~~~~~~d~~s~  171 (392)
                      .+....|.|.|
T Consensus       169 ~EDKgVDLYVl  179 (229)
T KOG3087|consen  169 PEDKGVDLYVL  179 (229)
T ss_pred             cccccceeeee
Confidence            66555666643

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=5.2e-07  Score=76.60  Aligned_cols=116  Identities=23%  Similarity=0.266  Sum_probs=75.5

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---h-----HHHHHHHHHHH--------------------------HH
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---D-----ITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~-----~~~~~~~E~~~--------------------------~~   96 (392)
                      .+.+|+-+.+|.+..  -|..+.+|.=.++..   .     ..++..+|..+                          ++
T Consensus         3 ~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           3 LIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             hhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            467899999998853  355667775433321   2     23345556665                          11


Q ss_pred             hhcCCcC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccc
Q psy6828          97 MENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS  170 (392)
Q Consensus        97 l~~~~~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s  170 (392)
                      ++....+ .-+.....+++.+-.-+.-||..++ +|+||.++||++..++ +.++|||++.+....+....|+|.
T Consensus        81 I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~gi-vHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~V  153 (204)
T COG3642          81 IEGELLKDALEEARPDLLREVGRLVGKLHKAGI-VHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHV  153 (204)
T ss_pred             eCChhHHHHHHhcchHHHHHHHHHHHHHHhcCe-ecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHH
Confidence            1111100 0001123567777777888999999 9999999999997654 999999999987766666666653

>KOG0590|consensus

Probab=98.33  E-value=9.7e-08  Score=97.40  Aligned_cols=116  Identities=22%  Similarity=0.259  Sum_probs=83.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+++|+|+|+.|-...... ....+|.|.+....  ....+....|..+                          
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            345567789999999999887643 34567888776543  1222333333333                          


Q ss_pred             ----------HHh-hcCCcCCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828          95 ----------DIM-ENEDVKLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----------~~l-~~~~~~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~  160 (392)
                                +.. .......+...+..++.|+..++.|+| ..++ .|||+||+|.+++..+ .+|++|||+|.....
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~-~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV-THRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc-ccCCCCCccchhccCCCcccCCCchhhccccc
Confidence                      111 111114566778899999999999999 8899 9999999999999999 999999999987654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.15  E-value=2.7e-05  Score=71.67  Aligned_cols=53  Identities=11%  Similarity=0.155  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-------CceEEEeccccchh
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-------RWVVKLADFGLTEF  157 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-------~~~~kl~DFGla~~  157 (392)
                      .+......++.+++..+.-||..|+ +|+|++|+|||++.       +..+.++||+.++.
T Consensus       135 ~~~~~~~~ll~~la~~i~~LH~~Gi-~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        135 PDPRLKRMLIKRVATMVRDMHAAGI-NHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcC-ccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            4455677899999999999999999 99999999999975       46799999998864

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.98  E-value=2.9e-05  Score=67.47  Aligned_cols=52  Identities=31%  Similarity=0.432  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHH-HhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828         106 NMFIASLVADILRGMLY-LHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       106 ~~~~~~i~~qi~~~l~y-lH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                      ......++.+++..+.. +|+.|+ +|+||.+.|||++++ .+.++|||-+....
T Consensus       105 ~~~~~~~~~~il~~~~~~~~~~gi-vHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  105 PEEPKELLEEILEEIIKMLHKAGI-VHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             GSTHHHHHHHHHHHHHHHHHCTTE-EESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCc-eecCCChhhEEeecc-eEEEEecCcceecC
Confidence            34567788888886665 579999 999999999999887 99999999776443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601|consensus

Probab=97.95  E-value=3.3e-06  Score=83.17  Aligned_cols=119  Identities=20%  Similarity=0.178  Sum_probs=86.5

Q ss_pred             ceeeeccCCCCC--cceeEEEEEEE--eecCcEEEEEEcCC--CChhHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSD--FRYSAIFTPIG--IYKGRIFAIKRIPK--KSVDITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~--G~~g~V~~~~~--~~~~~~vAiK~~~~--~~~~~~~~~~~E~~~----------------------   94 (392)
                      .+..-....+|.  |.+|.||.+..  ..++..+|+|.-+.  ........-.+|...                      
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~  192 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI  192 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence            444555778899  99999999998  78899999998321  110100111111111                      


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHH----HHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILR----GMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE  156 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~----~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~  156 (392)
                                   .+......-+++..++..+.+...    ||.++|+.++ +|-|+||.||++..+ ..++++|||+..
T Consensus       193 lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~-~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  193 LFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNI-VHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             ceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcc-cccccchhheecccccceeecCCcceeE
Confidence                         333333334788889999999999    9999999999 999999999999999 889999999987


Q ss_pred             hccccc
Q psy6828         157 FKRDAE  162 (392)
Q Consensus       157 ~~~~~~  162 (392)
                      .+.+..
T Consensus       272 ~i~~~~  277 (524)
T KOG0601|consen  272 KISDGN  277 (524)
T ss_pred             EccCCc
Confidence            665433

>KOG1243|consensus

Probab=97.91  E-value=6.9e-06  Score=82.02  Aligned_cols=119  Identities=14%  Similarity=0.135  Sum_probs=87.5

Q ss_pred             ccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHH
Q psy6828          13 SILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKEL   92 (392)
Q Consensus        13 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~   92 (392)
                      .+.+=++-|+-|+||||++|+.+|.+.                  |..|.++.+          +.     ......+  
T Consensus        55 ~~~~A~k~lKtlRHP~Il~yL~t~e~~------------------~~~ylvTEr----------V~-----Pl~~~lk--   99 (690)
T KOG1243|consen   55 LAKRAVKRLKTLRHPNILSYLDTTEEE------------------GTLYLVTER----------VR-----PLETVLK--   99 (690)
T ss_pred             HHHHHHHHhhhccCchhhhhhhhhccc------------------CceEEEeec----------cc-----cHHHHHH--
Confidence            355568889999999999999999888                  355666522          11     1111111  


Q ss_pred             HHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828          93 KIDIMENEDVKLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------  162 (392)
Q Consensus        93 ~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------  162 (392)
                                .++...+..-+.||+.||.||| .+++ +|.++.-+-++++..|..||++|-++.......         
T Consensus       100 ----------~l~~~~v~~Gl~qIl~AL~FL~~d~~l-vHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~  168 (690)
T KOG1243|consen  100 ----------ELGKEEVCLGLFQILAALSFLNDDCNL-VHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLI  168 (690)
T ss_pred             ----------HhHHHHHHHHHHHHHHHHHHHhccCCe-eeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhh
Confidence                      2557778888999999999998 5666 999999999999999999999998764322111         


Q ss_pred             ---c---------ccccccceeeeeee
Q psy6828         163 ---Y---------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---~---------~~~d~~s~g~~~~~  177 (392)
                         .         ...|.|-||++.|+
T Consensus       169 ~s~~~P~~~~~s~~s~D~~~Lg~li~e  195 (690)
T KOG1243|consen  169 ESFDDPEEIDPSEWSIDSWGLGCLIEE  195 (690)
T ss_pred             hcccChhhcCccccchhhhhHHHHHHH
Confidence               0         12389999999998

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.91  E-value=6.2e-05  Score=66.93  Aligned_cols=108  Identities=17%  Similarity=0.225  Sum_probs=75.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------HH
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------DI   96 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------~~   96 (392)
                      ..+++.|..+.||++... +|+.+++|....... .....+.+|..+                               ++
T Consensus         3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            357899999999999753 368999999865432 123345555555                               11


Q ss_pred             hhcCC-------cCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q psy6828          97 MENED-------VKLDNMFIASLVADILRGMLYLHDS-------------------------------------------  126 (392)
Q Consensus        97 l~~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~-------------------------------------------  126 (392)
                      +....       ..+++.+...++.+++..|.+||+.                                           
T Consensus        82 i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (223)
T cd05154          82 VDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL  161 (223)
T ss_pred             eCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence            11110       1245566778888999999888842                                           


Q ss_pred             ------------CcccccCCCCCceEEcC--CceEEEeccccchh
Q psy6828         127 ------------ALRYHGNLKASNCLVDS--RWVVKLADFGLTEF  157 (392)
Q Consensus       127 ------------~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~  157 (392)
                                  ..++|+|++|.||+++.  ++.+.++||+.+..
T Consensus       162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                        11489999999999998  56789999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601|consensus

Probab=97.89  E-value=1.2e-05  Score=79.35  Aligned_cols=107  Identities=24%  Similarity=0.270  Sum_probs=79.0

Q ss_pred             cCCCCCcceeEEEEEEEe-ecCcEEEEEEcCCCChhHH--HHHHHHHHH---------------------------HHhh
Q psy6828          49 SNPDSDFRYSAIFTPIGI-YKGRIFAIKRIPKKSVDIT--RAMKKELKI---------------------------DIME   98 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~~~~~~--~~~~~E~~~---------------------------~~l~   98 (392)
                      ...+|.|.|+.|+..... .++..|++|.+.+......  ..-..|+.+                           ++.+
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~  349 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCE  349 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhc
Confidence            567899999999988744 5678999998866533211  112222222                           3333


Q ss_pred             cCCc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828          99 NEDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE  156 (392)
Q Consensus        99 ~~~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~  156 (392)
                      ....        .+++...+.+..|++.++.++|++.. +|+|+||+||++.++ +..++.|||+..
T Consensus       350 ~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~-~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  350 GGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF-VHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             CcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhh-hcccccccceeeccchhhhhcccccccc
Confidence            3222        36667778899999999999999999 999999999999886 778899999875

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.82  E-value=7.6e-05  Score=74.61  Aligned_cols=37  Identities=24%  Similarity=0.318  Sum_probs=32.5

Q ss_pred             cCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828         125 DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus       125 ~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                      ..|. +|.|..|.||+++.+|.+.+.|||+...+.+..
T Consensus       283 ~dgf-fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~  319 (517)
T COG0661         283 RDGF-FHADPHPGNILVRSDGRIVLLDFGIVGRLDPKF  319 (517)
T ss_pred             hcCc-cccCCCccceEEecCCcEEEEcCcceecCCHHH
Confidence            3688 999999999999999999999999988765543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.70  E-value=6.2e-05  Score=66.68  Aligned_cols=55  Identities=35%  Similarity=0.474  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchhcc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEFKR  159 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~~~  159 (392)
                      .+......++.+++..+.-||++|+ +|+|++|.|||++.++   .+.++||+-++...
T Consensus       115 ~~~~~~~~ll~~l~~~i~~lH~~gi-~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  115 LDPSQRRELLRALARLIAKLHDAGI-YHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHCcC-CCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            4566778899999999999999999 9999999999999887   79999999877644

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.67  E-value=0.00029  Score=63.70  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=75.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----------------------hHHHHHHHHHHH---------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----------------------DITRAMKKELKI---------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------------------~~~~~~~~E~~~---------   94 (392)
                      ...+.+||.|--+.||.|.+. .|.++|||.=+-...                      -.....++|.++         
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            445789999999999999855 789999996532110                      011223444444         


Q ss_pred             ---------------HHhhcCC---cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 ---------------DIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 ---------------~~l~~~~---~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                                     ++++...   .+++.+....++..|++-+.-+-..|+ +|+|+.+=||+++++|.+.++||-=+
T Consensus       172 ~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~Gi-VHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         172 KVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGI-VHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             CCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCc-cccCCchheEEEecCCCEEEEeCccc
Confidence                           2222211   123466677777777777766668899 99999999999999999999999644

>PRK09902 hypothetical protein; Provisional

Probab=97.50  E-value=0.0012  Score=58.13  Aligned_cols=103  Identities=13%  Similarity=0.114  Sum_probs=74.4

Q ss_pred             CCCcceeEEEEEEEeecCcEEEEEEcCCC---C---hhHHHHHHHHHHH-------------------------------
Q psy6828          52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKK---S---VDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~---~~~~~~~~~E~~~-------------------------------   94 (392)
                      -|+||-+-|+...  ..|+.|=+|.-...   +   ......+.+|...                               
T Consensus        26 ~~rgG~SgV~r~~--~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVE--RNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEE--eCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence            5678888888864  33557888876421   1   1233456777665                               


Q ss_pred             -----------HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--EEEeccccchh
Q psy6828          95 -----------DIMENEDV-KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--VKLADFGLTEF  157 (392)
Q Consensus        95 -----------~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--~kl~DFGla~~  157 (392)
                                 +++.+... +.+..+...++.+++..+.-||+.|+ .|+|+-|.||+++.++.  ++++||--++.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv-~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNR-QHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCC-cCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence                       33433221 35666667899999999999999999 99999999999986666  99999976654

>KOG1266|consensus

Probab=97.39  E-value=0.00022  Score=65.69  Aligned_cols=99  Identities=18%  Similarity=0.275  Sum_probs=67.1

Q ss_pred             eeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHHHHhhcC
Q psy6828          21 VKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENE  100 (392)
Q Consensus        21 l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~~~l~~~  100 (392)
                      |-+|.|.|+|++...|.+......                       ..-.+.+|.+....   .+.|+++..     ..
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~-----------------------~rviFiteymssgs---~~~fLkrt~-----~~  169 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEK-----------------------PRVIFITEYMSSGS---LKQFLKRTK-----KN  169 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccc-----------------------cceEEEEecccchh---HHHHHHHHH-----Hh
Confidence            446779999999999987621000                       01122333333222   233333222     22


Q ss_pred             CcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEEe
Q psy6828         101 DVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus       101 ~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl~  150 (392)
                      ...+......+|+.||++||.|||+... ++|..+...-|++..+|-+|+.
T Consensus       170 ~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  170 QKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             hhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEec
Confidence            2358888899999999999999998765 6999999999999998888865

>KOG0195|consensus

Probab=97.15  E-value=0.00039  Score=62.39  Aligned_cols=135  Identities=15%  Similarity=0.187  Sum_probs=84.2

Q ss_pred             cccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEc-CCCChhHHHHHHH
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRI-PKKSVDITRAMKK   90 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~-~~~~~~~~~~~~~   90 (392)
                      +.+..|.-.|+-++||||+....++...+.                             .|.|-.. +..++..   +. 
T Consensus       232 rdfneefp~lrifshpnilpvlgacnsppn-----------------------------lv~isq~mp~gslyn---vl-  278 (448)
T KOG0195|consen  232 RDFNEEFPALRIFSHPNILPVLGACNSPPN-----------------------------LVIISQYMPFGSLYN---VL-  278 (448)
T ss_pred             chhhhhCcceeeecCCchhhhhhhccCCCC-----------------------------ceEeeeeccchHHHH---HH-
Confidence            567788889999999999888776665532                             2222222 1111110   11 


Q ss_pred             HHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEE--eccccchhccccc-----
Q psy6828          91 ELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKL--ADFGLTEFKRDAE-----  162 (392)
Q Consensus        91 E~~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl--~DFGla~~~~~~~-----  162 (392)
                            -+..+.-.+..++.+++.+++.|+.|||+... |..--|.+..++++++.+.+|  +|--++-......     
T Consensus       279 ------he~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw  352 (448)
T KOG0195|consen  279 ------HEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW  352 (448)
T ss_pred             ------hcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc
Confidence                  11122246778899999999999999998654 234467888899999876554  4422221111111     


Q ss_pred             --------------cccccccceeeeeee--ccCCCCcc
Q psy6828         163 --------------YTGTDQHSFLQHTYH--VNRAGSTE  185 (392)
Q Consensus       163 --------------~~~~d~~s~g~~~~~--~~~~~~~~  185 (392)
                                    ....|+|||.+++||  +++.++.+
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfad  391 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD  391 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence                          112399999999999  66655554

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.12  E-value=0.0022  Score=56.76  Aligned_cols=44  Identities=25%  Similarity=0.457  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +..++.+++.-+|+.|. .|+|..|.|++++++ .++++||+..+.
T Consensus       140 ~~~ki~~~ikqlH~~G~-~HGD~hpgNFlv~~~-~i~iID~~~k~~  183 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHGF-YHGDPHPGNFLVSNN-GIRIIDTQGKRM  183 (229)
T ss_pred             HHHHHHHHHHHHHHcCC-ccCCCCcCcEEEECC-cEEEEECccccc
Confidence            44567778999999999 999999999999855 499999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.11  E-value=0.0023  Score=57.32  Aligned_cols=107  Identities=22%  Similarity=0.231  Sum_probs=72.9

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHH---------------------HHHHHHHH----------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITR---------------------AMKKELKI----------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~---------------------~~~~E~~~----------   94 (392)
                      ..+++.|--+.||+|. ..++..+|+|+.......   ..+                     ...+|...          
T Consensus        53 ~g~istGKEA~Vy~a~-~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          53 VGCISTGKEANVYLAE-TGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             EeeecCCcceEEEeec-cCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            4478889999999997 356889999998643221   001                     11112221          


Q ss_pred             --------------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEec
Q psy6828          95 --------------DIMENE--------DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus        95 --------------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                                    +++...        +..+..+++..+..+++..+.-|-. .+. +|.||+.=|||+. ++.+.++|
T Consensus       132 vP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~L-VHgDLSEyNiL~~-~~~p~iID  209 (268)
T COG1718         132 VPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGL-VHGDLSEYNILVH-DGEPYIID  209 (268)
T ss_pred             CCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCc-ccccchhhheEEE-CCeEEEEE
Confidence                          222222        1124444677788888888887765 888 9999999999998 88999999


Q ss_pred             cccchhc
Q psy6828         152 FGLTEFK  158 (392)
Q Consensus       152 FGla~~~  158 (392)
                      ||=|...
T Consensus       210 ~~QaV~~  216 (268)
T COG1718         210 VSQAVTI  216 (268)
T ss_pred             Ccccccc
Confidence            9976544

>KOG1235|consensus

Probab=96.93  E-value=0.0072  Score=60.58  Aligned_cols=55  Identities=16%  Similarity=0.257  Sum_probs=37.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC----CceEEEeccccchhcccc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS----RWVVKLADFGLTEFKRDA  161 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~----~~~~kl~DFGla~~~~~~  161 (392)
                      ++...+..-+.+...-+.+  ..|. +|.|-.|.||++.+    ++.+.+-|||+.......
T Consensus       300 i~~~~i~~~l~~~~~~qIf--~~Gf-fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  300 ISPHDILNKLVEAYLEQIF--KTGF-FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             CCHHHHHHHHHHHHHHHHH--hcCC-ccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            4555444444443332222  4578 99999999999984    567999999998876543

>KOG3741|consensus

Probab=96.85  E-value=0.0049  Score=60.50  Aligned_cols=60  Identities=15%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828         102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus       102 ~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                      ...+|..++.++.|+..||.++|+.|. .=+-|.|.+||++.+.+++|+.-|+...+..+.
T Consensus       388 ~~~~e~~lW~y~~QLtaaL~sIHssGL-Ack~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~  447 (655)
T KOG3741|consen  388 LKAPEEVLWSYISQLTAALYSIHSSGL-ACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP  447 (655)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCc-eeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence            368899999999999999999999999 779999999999999899999888888766554

>KOG2137|consensus

Probab=96.54  E-value=0.0027  Score=64.20  Aligned_cols=54  Identities=20%  Similarity=0.301  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828         106 NMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus       106 ~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                      .+....=+.+.+.|+.|+|. .++ ||+.|.|++|.++..+..||+.|+++.....
T Consensus        98 Te~~f~nl~~v~dgl~flh~sAk~-VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen   98 TEDGFANLGNVADGLAFLHRSAKV-VHGNIQPEAIVVNANGDWKLAGFSFCVNANG  152 (700)
T ss_pred             ccHhhhhhhcccchhhhhccCcce-eecccchhheeeccCcceeeccchhhhccCC
Confidence            33444445567799999996 456 9999999999999999999999998865444

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.40  E-value=0.035  Score=47.30  Aligned_cols=103  Identities=21%  Similarity=0.282  Sum_probs=66.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------HHhhcCCcCCC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------DIMENEDVKLD  105 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------~~l~~~~~~l~  105 (392)
                      ...|++|++|.||+|.  +.|..+|+|+-+..+.  ...+..|.++                       +|+...  +|.
T Consensus        27 ~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~--~L~  100 (201)
T COG2112          27 EKELAKGTTSVVYLGE--WRGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGR--PLG  100 (201)
T ss_pred             hhhhhcccccEEEEee--ccCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCc--chh
Confidence            5679999999999996  4477999998765543  3456667765                       333322  232


Q ss_pred             HHHH---HHHHHHHHHHHHHHhcCCcccccCCC-CCceEEcCCceEEEeccccchhc
Q psy6828         106 NMFI---ASLVADILRGMLYLHDSALRYHGNLK-ASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       106 ~~~~---~~i~~qi~~~l~ylH~~~iiiHrDlK-p~NIll~~~~~~kl~DFGla~~~  158 (392)
                      ....   ..-+..+++.---|-..|| -|..|. |...++.+++.+.|+||-.|++.
T Consensus       101 ~~~~~~~rk~l~~vlE~a~~LD~~GI-~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112         101 KLEIGGDRKHLLRVLEKAYKLDRLGI-EHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             hhhhcccHHHHHHHHHHHHHHHHhcc-chhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            2222   3334455555334556777 787775 44555556668999999988754

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.36  E-value=0.026  Score=50.67  Aligned_cols=28  Identities=18%  Similarity=0.337  Sum_probs=24.7

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      .+|+|+.|.||++++++ +.++||+.+..
T Consensus       155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             eEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            47999999999999888 99999997753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.69  E-value=0.043  Score=48.05  Aligned_cols=38  Identities=26%  Similarity=0.358  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828         112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus       112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                      =+.+|.+-+.-+|..+| +-+|+|+.|..     .-||+|||.+
T Consensus       169 ~~~~~~~dl~~~~k~gI-~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  169 DIPQMLRDLKILHKLGI-VPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHHCCe-eeccCcccccc-----CCEEEecccC
Confidence            35778888899999999 99999999988     4589999864

>KOG1035|consensus

Probab=95.66  E-value=0.0026  Score=67.97  Aligned_cols=30  Identities=13%  Similarity=0.540  Sum_probs=27.4

Q ss_pred             cccccccceeeeccccceeeeeeccccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNVH   41 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   41 (392)
                      .+|.|||++|++|+|||+|+|+.+|.|...
T Consensus       522 skI~rEVk~LArLnHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  522 SKILREVKLLARLNHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             HHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence            468999999999999999999999998664

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=95.59  E-value=0.064  Score=51.71  Aligned_cols=48  Identities=19%  Similarity=0.268  Sum_probs=43.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                      ...|....+..+.++.+..-||.+|. .-+|+.++|+|+.+++.+.|.|
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh-~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGH-VVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCC-cccccCccceeeecCceEEEEc
Confidence            37888999999999999999999999 8999999999998888777766

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.41  E-value=0.036  Score=49.23  Aligned_cols=29  Identities=34%  Similarity=0.486  Sum_probs=20.0

Q ss_pred             ccccCCCCCceEEc-CCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVD-SRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~-~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++ .++.+.++||+.+..
T Consensus       168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  168 LIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEEeccccccceeeeccceeEEEecccceE
Confidence            49999999999999 566678999987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0578|consensus

Probab=95.24  E-value=0.0067  Score=59.80  Aligned_cols=28  Identities=11%  Similarity=0.311  Sum_probs=24.7

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +-++.|+.+|+.++|||||+|+.++...
T Consensus       315 eLilnEi~Vm~~~~H~NiVnfl~Sylv~  342 (550)
T KOG0578|consen  315 ELLLNEILVMRDLHHPNIVNFLDSYLVG  342 (550)
T ss_pred             hhhHHHHHHHHhccchHHHHHHHHhccc
Confidence            6688999999999999999998877655

>TIGR02721 ycfN_thiK thiamine kinase

Probab=95.07  E-value=0.066  Score=48.89  Aligned_cols=28  Identities=25%  Similarity=0.288  Sum_probs=24.4

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.||++++++ +.++||..+..
T Consensus       148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       148 PLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            49999999999998877 78999987754

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.70  E-value=0.35  Score=42.45  Aligned_cols=38  Identities=29%  Similarity=0.325  Sum_probs=28.6

Q ss_pred             HHHHHhcCCcccccCCCCCceEEcCC---c-eEEEec-cccchh
Q psy6828         119 GMLYLHDSALRYHGNLKASNCLVDSR---W-VVKLAD-FGLTEF  157 (392)
Q Consensus       119 ~l~ylH~~~iiiHrDlKp~NIll~~~---~-~~kl~D-FGla~~  157 (392)
                      -..||-+.+| +.+|++|.||++...   . .+.|+| ||-..+
T Consensus       130 f~~~l~~~~I-v~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  130 FKRYLLDHHI-VIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             HHHHHHHcCC-eecCCCcccEEEEecCCCceEEEEEeCCCCccc
Confidence            3567788899 999999999999643   2 588888 665443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK05231 homoserine kinase; Provisional

Probab=94.53  E-value=0.35  Score=45.60  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=25.3

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      .++ +|+|+.|.||+++.+...-++||+.+.
T Consensus       187 ~~l-iHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGV-IHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccc-CCCCCCCCcEEEECCceEEEEeccccc
Confidence            356 999999999999876656899999875

>PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP

Probab=94.18  E-value=0.5  Score=42.36  Aligned_cols=59  Identities=25%  Similarity=0.271  Sum_probs=47.5

Q ss_pred             CceEEEeecccchh-hhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFT-AMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft-~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ..+.+..-|+.++| .++...+|-+..-...+++..+.+.+.+||+.--=.-||-+|+++
T Consensus       126 ~~v~iAH~DI~d~T~~~Td~~~~ydt~~~I~~l~~~l~~~~~~~G~L~fylGGDNi~~v~  185 (246)
T PF05165_consen  126 GYVQIAHFDINDSTGTYTDEESPYDTYLEIEDLYAKLMKYLEKYGSLAFYLGGDNIMAVC  185 (246)
T ss_dssp             --EEEEEEEETTHHHHTTTTS-HHHHHHHHHHHHHHHHHHHHTTT---EEEETTEEEEE-
T ss_pred             CceEEEEEeeeccchhhhcccChHHHHHHHHHHHHHHHHHHHhcCCEEEEecCceEEEEC
Confidence            56889999999999 899899999999999999999999999999877777788888776

The enzyme also has an independent pyrophosphate phosphohydrolase activity. The proteins are 200-270 amino acids in length.; GO: 0003933 GTP cyclohydrolase activity, 0009058 biosynthetic process; PDB: 2QV6_B.

>KOG0606|consensus

Probab=92.99  E-value=0.045  Score=58.18  Aligned_cols=107  Identities=19%  Similarity=0.164  Sum_probs=72.2

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN   99 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~   99 (392)
                      ..++-.|+++.++.+.-..+|...++|.......   ...+....+-.+                          .++.+
T Consensus       809 ~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~  888 (1205)
T KOG0606|consen  809 TKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNG  888 (1205)
T ss_pred             cccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhcc
Confidence            4488889999999887666675555554432211   011111111111                          33322


Q ss_pred             CCc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         100 EDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       100 ~~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      +..        ..+.+-++.++..+..+++|||+..+ .|||++|.|++...++..++.|||+..
T Consensus       889 ~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r-~h~~~~p~~~l~~~~gh~~l~~~~t~~  952 (1205)
T KOG0606|consen  889 GDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLR-KHRDLKPDSLLIAYDGHRPLTDFGTLS  952 (1205)
T ss_pred             CCchhhhhcCCCcccccccchhHHHHhhhhccccchh-hcccccccchhhcccCCcccCcccccc
Confidence            211        35566677888899999999999888 999999999999999999999998543

>KOG0591|consensus

Probab=92.83  E-value=0.012  Score=53.44  Aligned_cols=28  Identities=7%  Similarity=0.481  Sum_probs=23.4

Q ss_pred             cccccccceeeeccccceeeeee-ccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFC-SWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~-~~~~~   39 (392)
                      ..+..|+.+|++|+|||||+|+. .+.++
T Consensus        63 q~~v~Ei~lLkQL~HpNIVqYy~~~f~~~   91 (375)
T KOG0591|consen   63 QDCVKEISLLKQLNHPNIVQYYAHSFIED   91 (375)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHhhhcc
Confidence            45678999999999999999988 55554

>KOG0575|consensus

Probab=92.82  E-value=0.051  Score=54.21  Aligned_cols=29  Identities=3%  Similarity=0.241  Sum_probs=27.1

Q ss_pred             cccccccceeeeccccceeeeeecccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      +++.+|++++++|+|||||++++.|.+..
T Consensus        63 eKv~~EIeIHr~L~HpnIV~f~~~FEDs~   91 (592)
T KOG0575|consen   63 EKVLNEIEIHRSLKHPNIVQFYHFFEDSN   91 (592)
T ss_pred             HHHHHHHHHHHhcCCCcEEeeeeEeecCC
Confidence            78899999999999999999999998884

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=92.53  E-value=0.21  Score=43.37  Aligned_cols=56  Identities=16%  Similarity=0.082  Sum_probs=47.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcC--CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         103 KLDNMFIASLVADILRGMLYLHDS--ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       103 ~l~~~~~~~i~~qi~~~l~ylH~~--~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      .-+|....+++.+++..+.+++..  +.+.-.|++|+|+-+++++++|++|.......
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            478999999999999999999962  22367999999999999999999998765543

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0193|consensus

Probab=92.27  E-value=0.11  Score=52.16  Aligned_cols=29  Identities=10%  Similarity=0.234  Sum_probs=23.3

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ++.|..||..|++=.|-||+-+-.++.+.
T Consensus       432 lqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  432 LQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             HHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            57899999999999999998665544444

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.24  E-value=1.3  Score=43.30  Aligned_cols=29  Identities=28%  Similarity=0.391  Sum_probs=24.2

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      ..+ +|+|+.|.|||++.+ .++++||-++.
T Consensus       223 ~~l-~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        223 EAL-LHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             Cce-eeccCCcccEEeeCC-CcEEEeccccc
Confidence            345 999999999999776 58999997664

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=92.11  E-value=0.25  Score=46.49  Aligned_cols=30  Identities=27%  Similarity=0.334  Sum_probs=26.2

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      .++ +|+|+.+.|++++.++...++||+.+.
T Consensus       187 ~~l-~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGV-IHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             Ccc-CCCCCCcCcEEEECCceEEEeeccccc
Confidence            456 999999999999988877899999764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG0582|consensus

Probab=92.04  E-value=0.048  Score=52.62  Aligned_cols=29  Identities=17%  Similarity=0.583  Sum_probs=26.7

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ++.+.+|++.++.++||||+.|+++|.-+
T Consensus        68 ld~l~kE~~~msl~~HPNIv~~~~sFvv~   96 (516)
T KOG0582|consen   68 LDALRKEVQTMSLIDHPNIVTYHCSFVVD   96 (516)
T ss_pred             HHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence            57899999999999999999999988766

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=91.62  E-value=0.2  Score=45.10  Aligned_cols=29  Identities=31%  Similarity=0.544  Sum_probs=24.5

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|++++.++..-++||+.+..
T Consensus       166 l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         166 WFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             EEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            39999999999998766567999998654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.58  E-value=0.28  Score=43.99  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=25.3

Q ss_pred             ccccCCCCCceEEcC-CceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDS-RWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~-~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++. ++.+.++||-.|..
T Consensus       172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            399999999999997 57899999987753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.38  E-value=0.36  Score=45.29  Aligned_cols=29  Identities=21%  Similarity=0.274  Sum_probs=24.5

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      .++ +|+|+.+.|++++. +.+.++||+.+.
T Consensus       187 ~~l-iHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGF-CHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             Cce-EcCCCCcccEEEeC-CcEEEEECcccc
Confidence            355 99999999999987 678899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PHA03111 Ser/Thr kinase; Provisional

Probab=91.30  E-value=0.25  Score=46.43  Aligned_cols=36  Identities=19%  Similarity=0.145  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHHHHHHhc---CCcccccCCCCCceEEcCC
Q psy6828         109 IASLVADILRGMLYLHD---SALRYHGNLKASNCLVDSR  144 (392)
Q Consensus       109 ~~~i~~qi~~~l~ylH~---~~iiiHrDlKp~NIll~~~  144 (392)
                      ++.++.||+.-...+-+   +...+|-||||.|||+-+.
T Consensus       281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            46778888654333322   2234999999999999443

>PRK10271 thiK thiamine kinase; Provisional

Probab=91.25  E-value=0.16  Score=43.90  Aligned_cols=28  Identities=18%  Similarity=0.228  Sum_probs=24.5

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      .+|.|+.|.|+++++++ ++++||+.+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            38999999999998877 89999998753

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=91.13  E-value=0.23  Score=46.88  Aligned_cols=33  Identities=24%  Similarity=0.338  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHHHHHh-----cCCcccccCCCCCceEEcC
Q psy6828         109 IASLVADILRGMLYLH-----DSALRYHGNLKASNCLVDS  143 (392)
Q Consensus       109 ~~~i~~qi~~~l~ylH-----~~~iiiHrDlKp~NIll~~  143 (392)
                      ++.++.||+  |.|+-     .+...+|-||||.|||+-+
T Consensus       277 vkfifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  277 VKFIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             HHHHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEec
Confidence            355667764  44522     2333499999999999943

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.12  E-value=0.39  Score=44.90  Aligned_cols=29  Identities=24%  Similarity=0.349  Sum_probs=25.7

Q ss_pred             ccccCCCCCceEEcCC----ceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSR----WVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~----~~~kl~DFGla~~  157 (392)
                      ++|.|+.|.|||++++    +.++++||..|..
T Consensus       181 lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         181 FCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             EEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            4899999999999875    8899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=90.62  E-value=0.4  Score=44.67  Aligned_cols=30  Identities=23%  Similarity=0.280  Sum_probs=25.9

Q ss_pred             CcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         127 ALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       127 ~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++ +|+|+.|.|+++++++...|+||..+..
T Consensus       176 ~l-~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         176 GV-IHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             cC-CccCcCcccEEEeCCceEEEeehhhhcC
Confidence            45 9999999999999887788999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=90.46  E-value=0.5  Score=45.12  Aligned_cols=54  Identities=24%  Similarity=0.149  Sum_probs=41.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      -.++++..++.+.+.-+.-+..+=..=||++.-.||||+ +|++.|+||-+++..
T Consensus       318 ~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         318 DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            456778888887665444444332247999999999999 999999999999953

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=90.45  E-value=0.34  Score=42.74  Aligned_cols=29  Identities=31%  Similarity=0.482  Sum_probs=20.4

Q ss_pred             ccccCCCCCceEE-cCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLV-DSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll-~~~~~~kl~DFGla~~  157 (392)
                      +.|.|+.|.|||+ +.++.++++||-.|..
T Consensus       145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  145 FCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             EeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            4899999999999 8889999999988764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG0192|consensus

Probab=90.38  E-value=0.093  Score=50.55  Aligned_cols=30  Identities=3%  Similarity=0.194  Sum_probs=26.2

Q ss_pred             ccccccccceeeeccccceeeeeecccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      .+.+.+|+.+|++|+|||||+++....+..
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~  112 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQFYGACTSPP  112 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            348999999999999999999988887763

>PRK10245 adrA diguanylate cyclase AdrA; Provisional

Probab=89.91  E-value=2.7  Score=40.63  Aligned_cols=58  Identities=14%  Similarity=0.064  Sum_probs=45.6

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ...++++.||.+|..+......+..-++|.++-+.+...+.. +..+-.+-||.++.+.
T Consensus       235 ~~~~ll~idId~Fk~INd~~Gh~~GD~lL~~vA~~L~~~l~~-~d~laRlggdeFavll  292 (366)
T PRK10245        235 RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG-SDVIGRFGGDEFAVIM  292 (366)
T ss_pred             CCEEEEEEECCcchHHHHhhCchHHHHHHHHHHHHHHHhCCC-CCEEEEEcCcEEEEEe
Confidence            457899999999999999888777788888887777777754 3466778888886554

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=89.86  E-value=0.25  Score=44.61  Aligned_cols=29  Identities=24%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      .+|+|+.|.|||+++++...|+||+.+..
T Consensus       165 l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         165 VTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             EECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            49999999999999987788999997753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=89.58  E-value=0.61  Score=43.02  Aligned_cols=49  Identities=14%  Similarity=0.256  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         109 IASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       109 ~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ....+..+-..+.-.+.. .+++|.|+.|.|++.++.+.++|+||--|..
T Consensus       134 ~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         134 LRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             HHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            344455555555555544 2349999999999999999999999976653

>KOG0615|consensus

Probab=89.39  E-value=0.11  Score=49.67  Aligned_cols=28  Identities=4%  Similarity=0.007  Sum_probs=23.1

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ..+.+|+.+|++|+|||||+...-+.+.
T Consensus       221 ~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  221 RDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            3478999999999999999997655554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	392
3uvj_A	225	Crystal Structure Of The Catalytic Domain Of The He		2e-31
3et6_B	190	The Crystal Structure Of The Catalytic Domain Of A		3e-28
3et6_A	190	The Crystal Structure Of The Catalytic Domain Of A		3e-28
2wz1_A	219	Structure Of The Catalytic Domain Of Human Soluble		5e-27
3uvj_B	220	Crystal Structure Of The Catalytic Domain Of The He		8e-25
1yk9_A	204	Crystal Structure Of A Mutant Form Of The Mycobacte		3e-23
1ab8_A	220	Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COM		7e-16
1azs_B	212	Complex Of Gs-Alpha With The Catalytic Domains Of M		9e-16
1cul_B	208	Complex Of Gs-Alpha With The Catalytic Domains Of M		1e-15
1cs4_A	225	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-15
1cjk_A	217	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-15
1azs_A	220	Complex Of Gs-Alpha With The Catalytic Domains Of M		3e-15
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-06
1fx2_A	235	Structural Analysis Of Adenylate Cyclases From Tryp		7e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		8e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-05
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		6e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-05
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		8e-05
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		8e-05
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		9e-05
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		9e-05
3r5g_A	198	Crystal Structure Of The Adenylyl Cyclase Cyab From		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-04
1fx4_A	231	Structure Analysis Of Adenylate Cyclases From Trypa		1e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		6e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		8e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		8e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		8e-04

>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 225

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 100/176 (56%), Gaps = 34/176 (19%)
Query: 210 RGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVET 269
           +G  V+A+ F +VT+ FSDIVGFTA+ ++ +PLQV+  LN LYT FD             
Sbjct: 3   QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFD------------- 49
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
                                G  DVYKVETIGDAY V  GL  +  + HA +IA M+L 
Sbjct: 50  ------------------QQCGELDVYKVETIGDAYCVAGGL-HKESDTHAVQIALMALK 90
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES 385
           ++E        H   + +K+RIG+HSG V AGVVG+KMPRYCLFG+ V  A++ ES
Sbjct: 91  MMELSDEVMSPH--GEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFES 144

>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 33/176 (18%)
Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
           S  A+     T+ FSDIVGFT +++ S+PL+V   L++LY  FD+ +  Y          
Sbjct: 1   SAPAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYP--------- 51
Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
                                 +YKVETIGDAYMVV  + +   + HA  +   +L + E
Sbjct: 52  ---------------------QLYKVETIGDAYMVVCNVTV-PCDDHADVLLEFALRMHE 89
Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
              R  V     + +++R+G+HSGPV AGVVG KMPR+ LFGDTVNTASRMES GE
Sbjct: 90  EASR--VASSLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGE 143

>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 33/176 (18%)
Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
           S  A+     T+ FSDIVGFT +++ S+PL+V   L++LY  FD+ +  Y          
Sbjct: 1   SAPAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYP--------- 51
Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
                                 +YKVETIGDAYMVV  + +   + HA  +   +L + E
Sbjct: 52  ---------------------QLYKVETIGDAYMVVCNVTV-PCDDHADVLLEFALRMHE 89
Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
              R  V     + +++R+G+HSGPV AGVVG KMPR+ LFGDTVNTASRMES GE
Sbjct: 90  EASR--VASSLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGE 143

>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 99/179 (55%), Gaps = 36/179 (20%)
Query: 214 VEAESFDSVTIYFSDIVGFTAMSAEST----PLQVVDFLNDLYTCFDSIVGNYDVYKVET 269
           V A+ +D+VTI FS IVGF A  ++       +++V+ LNDLYT FD++    D  K   
Sbjct: 5   VPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLT---DSRK--- 58
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
                                 N  VYKVET+GD YM VSGLP      HA  I  ++LD
Sbjct: 59  ----------------------NPFVYKVETVGDKYMTVSGLP-EPCIHHARSICHLALD 95
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           ++E   +  V     + +++ IGIH+G V  GV+G +MPRYCLFG+TVN  SR E+TGE
Sbjct: 96  MMEIAGQVQVDG---ESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGE 151

>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 220

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 97/179 (54%), Gaps = 36/179 (20%)
Query: 214 VEAESFDSVTIYFSDIVGFTAMSAEST----PLQVVDFLNDLYTCFDSIVGNYDVYKVET 269
           V A+ +D+VTI FS IVGF A  ++       +++V+ LNDLYT FD++    D  K   
Sbjct: 6   VPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLT---DSRK--- 59
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
                                 N  VYKVET+ D YM VSGLP      HA  I  ++LD
Sbjct: 60  ----------------------NPFVYKVETVCDKYMTVSGLP-EPCIHHARSICHLALD 96
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           ++E   +  V     + +++ IGIH+G V  GV+G +MPRY LFG+TVN  SR E+TGE
Sbjct: 97  MMEIAGQVQVDG---ESVQITIGIHTGEVVTGVIGQRMPRYSLFGNTVNLTSRTETTGE 152

>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial Adenylyl Cyclase Rv1625c Length = 204

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 36/172 (20%)
Query: 216 AESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYM 275
           A+ +D  ++ F+DIVGFT  ++ + P  +V FL+ LY+ FD +V                
Sbjct: 5   ADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELV---------------- 48
Query: 276 VVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVK 335
                     +QH +      K+E  GD+YMVVSG+P R    H   +A  +LD+     
Sbjct: 49  ----------DQHGL-----EKIEVSGDSYMVVSGVP-RPRPDHTQALADFALDMTNVAA 92
Query: 336 RFT-VRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMEST 386
           +    R  P   + LR+G+ +GPV AGVVG +  RYC++GD VN ASRMEST
Sbjct: 93  QLKDPRGNP---VPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMEST 141

>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX Length = 220

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAES----TPLQVVDFLNDLYTCFDSIVGN---YDVYKVET 269
           +S+D V + F+ I  F     ES      L+ +  LN++   FD ++       V K++T
Sbjct: 10  QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 69
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
           IG  YM  +GL     ++HA         +     YM            H G +   +  
Sbjct: 70  IGSTYMAATGLSAIPSQEHA---------QEPERQYM------------HIGTMVEFAYA 108
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
           L+  +    +     +D KLR+GI+ GPV AGV+G + P+Y ++G+TVN ASRM+STG
Sbjct: 109 LVGKLD--AINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 164

>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 212

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAES----TPLQVVDFLNDLYTCFDSIVGN---YDVYKVET 269
           +S+D V + F+ I  F     ES      L+ +  LN++   FD ++       V K++T
Sbjct: 11  QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 70
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
           IG  YM  +GL     ++HA         +     YM            H G +   +  
Sbjct: 71  IGSTYMAATGLSAIPSQEHA---------QEPERQYM------------HIGTMVEFAYA 109
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
           L+  +    +     +D KLR+GI+ GPV AGV+G + P+Y ++G+TVN ASRM+STG
Sbjct: 110 LVGKLD--AINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 165

>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 208

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAES----TPLQVVDFLNDLYTCFDSIVGN---YDVYKVET 269
           +S+D V + F+ I  F     ES      L+ +  LN++   FD ++       V K++T
Sbjct: 7   QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 66
Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
           IG  YM  +GL     ++HA         +     YM            H G +   +  
Sbjct: 67  IGSTYMAATGLSAIPSQEHA---------QEPERQYM------------HIGTMVEFAYA 105
Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
           L+  +    +     +D KLR+GI+ GPV AGV+G + P+Y ++G+TVN ASRM+STG
Sbjct: 106 LVGKLD--AINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 161

>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And Mg Length = 225

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 34/172 (19%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMV 276
           +  D+V+I F+DI GFT+++++ T  ++V  LN+L+  FD +                  
Sbjct: 30  QKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAA---------------- 73
Query: 277 VSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKR 336
                    E H +      +++ +GD Y  VSGLP    + HA     M +D++EA+  
Sbjct: 74  ---------ENHCL------RIKILGDCYYCVSGLPEARAD-HAHCCVEMGMDMIEAIS- 116
Query: 337 FTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             VR     ++ +R+GIHSG V  GV+GL+  ++ ++ + V  A+ ME+ G+
Sbjct: 117 -LVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGK 167

>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With Adenosine 5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn Length = 217

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 34/172 (19%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMV 276
           +  D+V+I F+DI GFT+++++ T  ++V  LN+L+  FD +                  
Sbjct: 22  QKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAA---------------- 65
Query: 277 VSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKR 336
                    E H +      +++ +GD Y  VSGLP    + HA     M +D++EA+  
Sbjct: 66  ---------ENHCL------RIKILGDCYYCVSGLPEARAD-HAHCCVEMGMDMIEAIS- 108
Query: 337 FTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             VR     ++ +R+GIHSG V  GV+GL+  ++ ++ + V  A+ ME+ G+
Sbjct: 109 -LVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGK 159

>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 220

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 34/172 (19%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMV 276
           +  D+V+I F+DI GFT+++++ T  ++V  LN+L+  FD +                  
Sbjct: 30  QKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAA---------------- 73
Query: 277 VSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKR 336
                    E H +      +++ +GD Y  VSGLP    + HA     M +D++EA+  
Sbjct: 74  ---------ENHCL------RIKILGDCYYCVSGLPEARAD-HAHCCVEMGMDMIEAIS- 116
Query: 337 FTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
             VR     ++ +R+GIHSG V  GV+GL+  ++ ++ + V  A+ ME+ G+
Sbjct: 117 -LVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGK 167

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           +  D+  GM YL ++++  H +L A NCLV    V+K++DFG+T F  D +YT +    F
Sbjct: 108 MCLDVCEGMAYLEEASV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 166

>pdb|1FX2|A Chain A, Structural Analysis Of Adenylate Cyclases From Trypanosoma Brucei In Their Monomeric State Length = 235

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMV 276
           E  D VT+ F+DI   TA+ A + P  + D +   +    S++G Y  Y+V+T+GD++M+
Sbjct: 8   EPTDPVTLIFTDIESSTALWA-AHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMI 66
Query: 277 VSGLPIRNGE-----QHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLL 331
            S  P    +     Q    ++D +    + D+Y            ++    A M  +  
Sbjct: 67  ASKSPFAAVQLAQELQLCFLHHD-WGTNALDDSYREFEEQRAEGECEYTPPTAHMDPE-- 123
Query: 332 EAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
                  V  R  + L++R+GIH+G +C          Y  +G T N A+R ES  
Sbjct: 124 -------VYSRLWNGLRVRVGIHTG-LCDIRHDEVTKGYDYYGRTPNMAARTESVA 171

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DFG+T F  D +YT +  
Sbjct: 105 LLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
Query: 169 HSF 171
             F
Sbjct: 164 TKF 166

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DFG+T F  D +YT +  
Sbjct: 103 LLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
Query: 169 HSF 171
             F
Sbjct: 162 TKF 164

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DFG+T F  D +YT +  
Sbjct: 125 LLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 169 HSF 171
             F
Sbjct: 184 TKF 186

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DFG+T F  D +YT +  
Sbjct: 106 LLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164
Query: 169 HSF 171
             F
Sbjct: 165 TKF 167

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DFG+T F  D +YT +  
Sbjct: 108 LLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166
Query: 169 HSF 171
             F
Sbjct: 167 TKF 169

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 103 KLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158
           +LD     S+  D+ +GM YLH+ +    H NLK+ N LVD ++ VK+ DFGL+  K
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL------TEF 157
           L+  +IA+++ +IL+G+ YLH S  + H ++KA+N L+  +  VKLADFG+      T+ 
Sbjct: 113 LEETYIATILREILKGLDYLH-SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 171
Query: 158 KRDAEYTGT 166
           KR+  + GT
Sbjct: 172 KRNX-FVGT 179

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL----- 154
           E   LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG+     
Sbjct: 117 EPGPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 175
Query: 155 -TEFKRDAEYTGT 166
            T+ KR+  + GT
Sbjct: 176 DTQIKRNT-FVGT 187

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL----- 154
           E   LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG+     
Sbjct: 97  EPGPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 155 -TEFKRDAEYTGT 166
            T+ KR+  + GT
Sbjct: 156 DTQIKRNT-FVGT 167

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL----- 154
           E   LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG+     
Sbjct: 112 EPGPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170
Query: 155 -TEFKRDAEYTGT 166
            T+ KR+  + GT
Sbjct: 171 DTQIKRNX-FVGT 182

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL----- 154
           E   LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG+     
Sbjct: 97  EPGPLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Query: 155 -TEFKRDAEYTGT 166
            T+ KR+  + GT
Sbjct: 156 DTQIKRNX-FVGT 167

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL------TEF 157
            D   IA+++ +IL+G+ YLH S  + H ++KA+N L+  +  VKLADFG+      T+ 
Sbjct: 117 FDEFQIATMLKEILKGLDYLH-SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 158 KRDAEYTGT 166
           KR+  + GT
Sbjct: 176 KRNT-FVGT 183

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           + S    + RGM YL +     H +L A NC++D  + VK+ADFGL     D EY    Q
Sbjct: 126 LISFGLQVARGMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184
Query: 169 H 169
           H
Sbjct: 185 H 185

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 84  ITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143
           IT  M     ++ +     +     +  +  D+   M YL +S    H +L A NCLV+ 
Sbjct: 82  ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVND 140
Query: 144 RWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           + VVK++DFGL+ +  D EYT +    F
Sbjct: 141 QGVVKVSDFGLSRYVLDDEYTSSRGSKF 168

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 103 KLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158
           +LD     S+  D+ +GM YLH+ +    H +LK+ N LVD ++ VK+ DFGL+  K
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 84  ITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143
           IT  M     ++ +     +     +  +  D+   M YL +S    H +L A NCLV+ 
Sbjct: 97  ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVND 155
Query: 144 RWVVKLADFGLTEFKRDAEYTGT 166
           + VVK++DFGL+ +  D EYT +
Sbjct: 156 QGVVKVSDFGLSRYVLDDEYTSS 178

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           +  +  D+   M YL +S    H +L A NCLV+ + VVK++DFGL+ +  D EYT +
Sbjct: 102 LLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           +  +  D+   M YL +S    H +L A NCLV+ + VVK++DFGL+ +  D EYT +
Sbjct: 106 LLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           +  +  D+   M YL +S    H +L A NCLV+ + VVK++DFGL+ +  D EYT +
Sbjct: 107 LLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163

>pdb|3R5G|A Chain A, Crystal Structure Of The Adenylyl Cyclase Cyab From P. Aeruginosa Length = 198

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           +T++FSDI GFT +S E     + D LN+       I   Y     + +GD  MV  G P
Sbjct: 10  LTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDP 69
Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVS-GLPIRNGEQHAGEIASMSLDLLEAVKRFTVR 340
              G +               DA   VS G+ +R   +H        + +L    R    
Sbjct: 70  STQGAKK--------------DAVAAVSMGIAMR---KH--------MKVLRQQWRAQGI 104
Query: 341 HRPHDDLKLRIGIHSGPVCAGVVGLKMPR-YCLFGDTVNTASRMESTGE 388
            +P   L++R+GI++G    G  G      Y + G  VN ASR+ES  E
Sbjct: 105 TKP---LEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASE 150

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 84  ITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143
           IT  M     ++ +     +     +  +  D+   M YL +S    H +L A NCLV+ 
Sbjct: 88  ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLAARNCLVND 146
Query: 144 RWVVKLADFGLTEFKRDAEYTGT 166
           + VVK++DFGL+ +  D EYT +
Sbjct: 147 QGVVKVSDFGLSRYVLDDEYTSS 169

>pdb|1FX4|A Chain A, Structure Analysis Of Adenylate Cyclases From Trypanosoma Brucei In Their Monomeric State Length = 231

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
           S   E    VT+ F+DI   TA+ A + P  + D +   +    S++  Y+ Y+V+T+GD
Sbjct: 4   SAPKEPTGPVTLIFTDIESSTALWA-AHPDLMPDAVATHHRLIRSLITRYECYEVKTVGD 62
Query: 273 AYMVVSGLPIRNGE-----QHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMS 327
           ++M+ S  P    +     Q      D ++   + ++Y            ++    AS+ 
Sbjct: 63  SFMIASKSPFAAVQLAQELQLCFLRLD-WETNAVDESYREFEEQRAEGECEYTPPTASLD 121
Query: 328 LDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES 385
            +         V  R  + L++R+GIH+G +C          Y  +G T N A+R ES
Sbjct: 122 PE---------VYSRLWNGLRVRVGIHTG-LCDIRYDEVTKGYDYYGRTSNMAARTES 169

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 396
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 397 GENLVCKVADFGLARLIEDNEYTARQGAKF 426

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 84  ITRAMKKELKIDIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142
           IT  M+    +D ++    +KL    +  + A I  GM ++ +     H NL+A+N LV 
Sbjct: 81  ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRNLRAANILVS 139
Query: 143 SRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
                K+ADFGL     D EYT  +   F
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKF 168

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 313
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKF 343

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 83  VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 140
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 141 GENLVCKVADFGLARLIEDNEYTARQGAKF 170

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 313
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 314 GENLVCKVADFGLARLIEDNEYTARQGAKF 343

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 90  VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 147
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKF 177

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           +  +  E  +L    +  +V D   GM YL +S    H +L A NCLV  + V+K++DFG
Sbjct: 200 LTFLRTEGARLRVKTLLQMVGDAAAGMEYL-ESKCCIHRDLAARNCLVTEKNVLKISDFG 258
Query: 154 LTEFKRDAEYTGT 166
           ++  + D  Y  +
Sbjct: 259 MSREEADGVYAAS 271

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 87  VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER--MNYVHRDLRAANILV 144
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 145 GENLVCKVADFGLARLIEDNEYTARQGAKF 174

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 79  VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 136
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 137 GENLVCKVADFGLARLIEDNEYTARQGAKF 166

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 90  VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 147
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKF 177

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 90  VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 147
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 148 GENLVCKVADFGLARLIEDNEYTARQGAKF 177

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           V L  + I +L+ ++L G+ Y+H + +  H +LK +NCLV+    VK+ DFGL 
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVHSAGI-LHRDLKPANCLVNQDCSVKVCDFGLA 203

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 81  VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILV 138
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 139 GENLVCKVADFGLARLIEDNEYTARQGAKF 168

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           +  +  D+  GM +L +S    H +L A NCLVD    VK++DFG+T +  D +Y  +
Sbjct: 106 LLEMCYDVCEGMAFL-ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           +D +  E  ++    +  +   +LRG+ YL +     H ++K SN LV+SR  +KL DFG
Sbjct: 101 LDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG 160
Query: 154 LT 155
           ++
Sbjct: 161 VS 162

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157
           LD   IA+++ ++L G+ YLH +  + H ++KA N L+     V++ADFG++ F
Sbjct: 118 LDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAF 170

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 84  ITRAMKKELKIDIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLV 141
           +T  M K   +D ++ E  K L    +  + A I  GM Y+    + Y H +L+A+N LV
Sbjct: 257 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE--RMNYVHRDLRAANILV 314
Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
               V K+ADFGL     D EYT      F
Sbjct: 315 GENLVCKVADFGLGRLIEDNEYTARQGAKF 344

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157
           LD   IA+++ ++L G+ YLH +  + H ++KA N L+     V++ADFG++ F
Sbjct: 113 LDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAF 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	392
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	3e-97
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	5e-92
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	1e-90
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	1e-89
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	6e-86
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	6e-82
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	1e-47
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	8e-46
2w01_A	208	Adenylate cyclase; guanylyl cyclase, class III nuc	1e-23
3r5g_A	198	CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas	2e-23
1ybt_A	184	Hydrolase, alpha/beta hydrolase fold family; cycla	3e-22
1wc3_A	219	Adenylate cyclase; soluble adenylyl cyclase, CAMP	7e-22
3mr7_A	189	Adenylate/guanylate cyclase/hydrolase, alpha/beta	3e-20
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-08
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-08
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	8e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-07
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	8e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-06
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-04
3hls_A	66	Guanylate cyclase soluble subunit beta-1; coiled-c	9e-04

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225

 Score =  288 bits (738), Expect = 3e-97
 Identities = 76/179 (42%), Positives = 99/179 (55%), Gaps = 34/179 (18%)

Query: 210 RGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVET 269
           +G  V+A+ F +VT+ FSDIVGFTA+ ++ +PLQV+  LN LYT FD   G  DVYKVET
Sbjct: 3   QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVET 62

Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
           IGDAY V  GL                                 +  + HA +IA M+L 
Sbjct: 63  IGDAYCVAGGLH--------------------------------KESDTHAVQIALMALK 90

Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           ++E        H     +K+RIG+HSG V AGVVG+KMPRYCLFG+ V  A++ ES   
Sbjct: 91  MMELSDEVMSPHGEP--IKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSV 147

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204

 Score =  274 bits (703), Expect = 5e-92
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 34/176 (19%)

Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
           ++ A+ +D  ++ F+DIVGFT  ++ + P  +V FL+ LY+ FD +V  + + K+E  GD
Sbjct: 2   NIIADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVSGD 61

Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
           +YMVVSG+P    +                                H   +A  +LD+  
Sbjct: 62  SYMVVSGVPRPRPD--------------------------------HTQALADFALDMTN 89

Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
              +   +    + + LR+G+ +GPV AGVVG +  RYC++GD VN ASRMEST  
Sbjct: 90  VAAQL--KDPRGNPVPLRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDS 143

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219

 Score =  271 bits (694), Expect = 1e-90
 Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 36/182 (19%)

Query: 211 GTSVEAESFDSVTIYFSDIVGFTAMSAESTP----LQVVDFLNDLYTCFDSIVGNYDVYK 266
              V A+ +D+VTI FS IVGF A  ++       +++V+ LNDLYT FD++  +     
Sbjct: 2   KRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRK--- 58

Query: 267 VETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASM 326
                                    N  VYKVET+GD YM VSGLP      HA  I  +
Sbjct: 59  -------------------------NPFVYKVETVGDKYMTVSGLP-EPCIHHARSICHL 92

Query: 327 SLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMEST 386
           +LD++E   +  V       +++ IGIH+G V  GV+G +MPRYCLFG+TVN  SR E+T
Sbjct: 93  ALDMMEIAGQVQVDGES---VQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETT 149

Query: 387 GE 388
           GE
Sbjct: 150 GE 151

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220

 Score =  268 bits (688), Expect = 1e-89
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 30/186 (16%)

Query: 210 RGTSVEAESFDSVTIYFSDIVGFTAMSAES----TPLQVVDFLNDLYTCFDSIVGN---Y 262
           +   +  +S+D V + F+ I  F     ES      L+ +  LN++   FD ++      
Sbjct: 3   KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFS 62

Query: 263 DVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGE 322
            V K++TIG  YM  +GL     ++HA                             H G 
Sbjct: 63  GVEKIKTIGSTYMAATGLSAIPSQEHAQ---------------------EPERQYMHIGT 101

Query: 323 IASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASR 382
           +   +  L+  +          +D KLR+GI+ GPV AGV+G + P+Y ++G+TVN ASR
Sbjct: 102 MVEFAYALVGKLDAI--NKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASR 159

Query: 383 MESTGE 388
           M+STG 
Sbjct: 160 MDSTGV 165

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220

 Score =  259 bits (663), Expect = 6e-86
 Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 37/196 (18%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
             +  ++  +       +   +  +  D+V+I F+DI GFT+++++ T  ++V  LN+L+
Sbjct: 9   MEMKADINAKQEDMMFHK---IYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELF 65

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
             FD +       +++ +GD Y  VSGLP    +                          
Sbjct: 66  ARFDKLAAENHCLRIKILGDCYYCVSGLPEARAD-------------------------- 99

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
                 HA     M +D++EA+     R     ++ +R+GIHSG V  GV+GL+  ++ +
Sbjct: 100 ------HAHCCVEMGMDMIEAISLV--REMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDV 151

Query: 373 FGDTVNTASRMESTGE 388
           + + V  A+ ME+ G+
Sbjct: 152 WSNDVTLANHMEAGGK 167

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190

 Score =  247 bits (634), Expect = 6e-82
 Identities = 71/176 (40%), Positives = 96/176 (54%), Gaps = 33/176 (18%)

Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
           S  A+     T+ FSDIVGFT +++ S+PL+V   L++LY  FD+ +  Y          
Sbjct: 1   SAPAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEY---------- 50

Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
                                 +YKVETIGDAYMVV  + +   + HA  +   +L + E
Sbjct: 51  --------------------PQLYKVETIGDAYMVVCNVTVPCDD-HADVLLEFALRMHE 89

Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
              R        + +++R+G+HSGPV AGVVG KMPR+ LFGDTVNTASRMES GE
Sbjct: 90  EASRV--ASSLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGE 143

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235

 Score =  161 bits (409), Expect = 1e-47
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 7/176 (3%)

Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
               E  D VT+ F+DI   TA+   + P  + D +   +    S++G Y  Y+V+T+GD
Sbjct: 4   RAPKEPTDPVTLIFTDIESSTALW-AAHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGD 62

Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
           ++M+ S  P     Q A    ++       D          R  E+   E          
Sbjct: 63  SFMIASKSPFAAV-QLAQ---ELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTA 118

Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
            +    V  R  + L++R+GIH+G        +    Y  +G T N A+R ES   
Sbjct: 119 HMDP-EVYSRLWNGLRVRVGIHTGLCDIRHDEV-TKGYDYYGRTPNMAARTESVAN 172

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407

 Score =  161 bits (408), Expect = 8e-46
 Identities = 37/196 (18%), Positives = 58/196 (29%), Gaps = 53/196 (27%)

Query: 193 EALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252
              L  M+         R           VT+ F+D+VGFT +    +  ++      L 
Sbjct: 187 FMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLA 246

Query: 253 TCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLP 312
                +     V+ ++TIGDA M+V   P                               
Sbjct: 247 GLARDLTA-PPVWFIKTIGDAVMLVCPDPA------------------------------ 275

Query: 313 IRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL 372
                     +    L L+E V         ++  +LR G+ SG   +            
Sbjct: 276 ---------PLLDTVLKLVEVVD------TDNNFPRLRAGVASGMAVSRA-------GDW 313

Query: 373 FGDTVNTASRMESTGE 388
           FG  VN ASR+     
Sbjct: 314 FGSPVNVASRVTGVAR 329

>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Length = 208

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 37/168 (22%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           +TI  SD+ GFT+ S    P +VV  LN  +     ++ ++                   
Sbjct: 15  ITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHG------------------ 56

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
                    G  D +    +GD  +V+ G P    +  A    +  +++  A++    + 
Sbjct: 57  ---------GTIDEF----MGDGILVLFGAPTSQ-QDDALRAVACGVEMQLALREVNQQV 102

Query: 342 RPHD--DLKLRIGIHSGPVCAGVVG--LKMPRYCLFGDTVNTASRMES 385
                  L++ IGI++G V  G +G   +  +Y + G  VN   R+ES
Sbjct: 103 TGLGLQPLEMGIGINTGEVVVGNIGSEKRT-KYGVVGAQVNLTYRIES 149

>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} Length = 198

 Score = 95.7 bits (239), Expect = 2e-23
 Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 38/170 (22%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           +T++FSDI GFT +S E     + D LN+       I   Y                   
Sbjct: 10  LTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYG------------------ 51

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNG-EQHAGEIASMSLDLLEAVKRFTVR 340
                    G  D +    +GD  MV  G P   G ++ A    SM + + + +K    +
Sbjct: 52  ---------GTIDKF----VGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQ 98

Query: 341 HRPH---DDLKLRIGIHSGPVCAGVVG--LKMPRYCLFGDTVNTASRMES 385
            R       L++R+GI++G    G  G   +M  Y + G  VN ASR+ES
Sbjct: 99  WRAQGITKPLEIRMGINTGYCTVGNFGADTRM-DYTIIGREVNLASRLES 147

>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Length = 184

 Score = 92.0 bits (229), Expect = 3e-22
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 50/164 (30%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
            TI F+DIVG T  +A     +  D L++  T     +  +   +V T GD ++     P
Sbjct: 18  ATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSP 77

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
                  A+                                  + + D+++AV       
Sbjct: 78  SA-----AI----------------------------------ACADDIVDAVAAL---- 94

Query: 342 RPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES 385
                +++RIGIH+G V    V        + G  V+  +R+ +
Sbjct: 95  ----GIEVRIGIHAGEV---EVRDASHGTDVAGVAVHIGARVCA 131

>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Length = 219

 Score = 91.9 bits (229), Expect = 7e-22
 Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 43/175 (24%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           +TI FSDIVGFT MS       V + LN+        V         T+ D +       
Sbjct: 28  ITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQ----GTV-DKF------- 75

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNG-EQHAGEIASMSLDLLEAVKRF--- 337
                              +GDA M + G P      +      + +  +L A+++    
Sbjct: 76  -------------------VGDAIMALYGAPEEMSPSEQVRRAIATARQMLVALEKLNQG 116

Query: 338 -----TVRHRPHDDLKLRIGIHSGPVCAGVVG--LKMPRYCLFGDTVNTASRMES 385
                 V       ++ R GIH G    G+ G   +   +   G +VN A+R++ 
Sbjct: 117 WQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERS-DFTAIGPSVNIAARLQE 170

>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Length = 189

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 46/164 (28%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
             I  +D+ G++ +   +    +           D  +       V+T GD  +      
Sbjct: 8   CAILAADMAGYSRLMERNETDVLNRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDTA 67

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
                  A+                                    +L++ +A+++     
Sbjct: 68  QA-----AL----------------------------------RCALEIQQAMQQREEDT 88

Query: 342 RPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMES 385
              + ++ RIGI+ G +   V+        +FGD VN A+R+E+
Sbjct: 89  PRKERIQYRIGINIGDI---VLE----DGDIFGDAVNVAARLEA 125

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            I+++ D +       S   DI  GM YLH   +  H +L + NCLV     V +ADFGL
Sbjct: 96  GIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGL 154

Query: 155 TEFKRDAEYTGTDQHS 170
                D +       S
Sbjct: 155 ARLMVDEKTQPEGLRS 170

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 40/142 (28%)

Query: 65  GIYKGRIFAIKRI--PKKSVDITRAMKKELKI-----------------------DIME- 98
             + G   A+K +       +      +E+ I                        + E 
Sbjct: 56  AEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

Query: 99  -------------NEDVKLDNMFIASLVADILRGMLYLHDSALR-YHGNLKASNCLVDSR 144
                            +LD     S+  D+ +GM YLH+      H NLK+ N LVD +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK 175

Query: 145 WVVKLADFGLTEFKRDAEYTGT 166
           + VK+ DFGL+  K     +  
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSK 197

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             +   + K +   +  +     RGM YLH  ++  H +LK++N  +     VK+ DFGL
Sbjct: 108 HHLHASETKFEMKKLIDIARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGL 166

Query: 155 TEFKRDAEYTGT 166
              K     +  
Sbjct: 167 ATEKSRWSGSHQ 178

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 1/70 (1%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALR-YHGNLKASNCLVDSRWVVKLADFGLTE 156
           E  +  +D         D+ RGM +LH          L + + ++D     +++   +  
Sbjct: 102 EGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF 161

Query: 157 FKRDAEYTGT 166
             +       
Sbjct: 162 SFQSPGRMYA 171

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 47/149 (31%)

Query: 65  GIYKGRIFAIKRIPKKSVDITRAMKKELK--IDIMEN----------------------- 99
             + G   A+K       +      + ++    +                          
Sbjct: 26  AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85

Query: 100 ------------EDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVD--- 142
                          ++    + +    I RGM YLHD A+    H +LK+SN L+    
Sbjct: 86  EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145

Query: 143 -----SRWVVKLADFGLTEFKRDAEYTGT 166
                S  ++K+ DFGL            
Sbjct: 146 ENGDLSNKILKITDFGLAREWHRTTKMSA 174

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 40/128 (31%)

Query: 65  GIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------DIME----- 98
             ++ +  AIK+I  +S    +A   EL+                       +ME     
Sbjct: 27  AKWRAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGG 84

Query: 99  ---------NEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW-V 146
                                S      +G+ YLH    +   H +LK  N L+ +   V
Sbjct: 85  SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144

Query: 147 VKLADFGL 154
           +K+ DFG 
Sbjct: 145 LKICDFGT 152

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            ++ +  + LD      +  +I++GM YLH   +  H +LK+ N   D+   V + DFGL
Sbjct: 118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI-LHKDLKSKNVFYDN-GKVVITDFGL 175

Query: 155 -TEFKRDAEYTGTDQHSFLQHTYH 177
            +           D+         
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLC 199

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 7/50 (14%)

Query: 112 LVADILRGMLYLHDSALRYHGN-------LKASNCLVDSRWVVKLADFGL 154
           L    + G+ +LH       G        LK+ N LV       +AD GL
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 56.4 bits (136), Expect = 4e-09
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 8/76 (10%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRY--------HGNLKASNCLVDSRWVVKLADFGL 154
             D +    L   + RG+ YLH    R         H +L + N LV +     ++DFGL
Sbjct: 107 TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166

Query: 155 TEFKRDAEYTGTDQHS 170
           +            +  
Sbjct: 167 SMRLTGNRLVRPGEED 182

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170
             + RGM YL  +  ++ H +L A NC++D  + VK+ADFGL     D EY    QH 
Sbjct: 131 LQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHR 186

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 51/158 (32%)

Query: 43  SQVSLSSNPDSDFRYSAIFTPIG------IYKGR------IFAIKRIPKKSVDITRAMKK 90
             V    +P+  +    I   +G      +YK +      + A K I  KS +       
Sbjct: 9   EHVRRDLDPNEVWE---IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65

Query: 91  ELKI-----------------------------------DIMENEDVKLDNMFIASLVAD 115
           E++I                                    IM   D  L    I  +   
Sbjct: 66  EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           +L  + +LH S    H +LKA N L+     ++LADFG
Sbjct: 126 MLEALNFLH-SKRIIHRDLKAGNVLMTLEGDIRLADFG 162

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 56.4 bits (136), Expect = 7e-09
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           A I  GM Y+    + Y H +L+A+N LV    V K+ADFGL     D EYT      F
Sbjct: 370 AQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGN-------LKASNCLVDSRWVVKLADFGL 154
            LD +    +V  I  G+ +LH       G        LK+ N LV       +AD GL
Sbjct: 101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
           A I  GM Y+    + Y H +L+A+N LV    V K+ADFGL     D EYT      F
Sbjct: 287 AQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170
             + +GM +L  ++ ++ H +L A NC++D ++ VK+ADFGL     D E+      +
Sbjct: 199 LQVAKGMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171
             I   M YL      + H NL A NCLV    +VK+ADFGL+       YT      F
Sbjct: 325 TQISSAMEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTE 156
               +KL    +  + A I  GM ++      Y H +L+A+N LV      K+ADFGL  
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

Query: 157 FKRDAEYT 164
              D EYT
Sbjct: 158 LIEDNEYT 165

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRW-----VVK 148
             + ++   +       L+ DI  G+ Y+ +      H +L++ N  + S         K
Sbjct: 110 HRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169

Query: 149 LADFGLTEFKRD 160
           +ADFGL++    
Sbjct: 170 VADFGLSQQSVH 181

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170
             + +GM YL  ++ ++ H +L A NC++D ++ VK+ADFGL     D EY      +
Sbjct: 135 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           ++ N  VK     I  ++  +L G+ Y+H + +  H ++KA+N L+    V+KLADFGL
Sbjct: 113 LLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGL 170

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
            D+  GM YL        H +L A NCLV    V+K++DFG+T F  D +YT
Sbjct: 111 LDVCEGMAYL--EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           DI+   +  L    IA+++   L+G+ YLH    + H ++KA N L+++    KLADFG
Sbjct: 113 DIIRLRNKTLTEDEIATILQSTLKGLEYLH-FMRKIHRDIKAGNILLNTEGHAKLADFG 170

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167
            D+  GM +L   + ++ H +L A NCLVD    VK++DFG+T +  D +Y  + 
Sbjct: 111 YDVCEGMAFL--ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
            D+   M YL   + ++ H +L A NCLV+ + VVK++DFGL+ +  D EYT
Sbjct: 127 KDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 50/151 (33%)

Query: 65  GIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94
           G++  R  A+KRI  +         +E+++                              
Sbjct: 44  GMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100

Query: 95  -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV-----DSR 144
                + +E +D     +   +L+     G+ +LH   +  H +LK  N L+       +
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI-VHRDLKPHNILISMPNAHGK 159

Query: 145 WVVKLADFGLTEFKRDAEYTGTDQHSFLQHT 175
               ++DFGL       +     +HSF + +
Sbjct: 160 IKAMISDFGL------CKKLAVGRHSFSRRS 184

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             +   + YL   + R+ H ++ A N LV S   VKL DFGL+ +  D+ Y 
Sbjct: 123 YQLSTALAYL--ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGN-------LKASNCLVDSRWVVKLADFGLT 155
            +    +  L      G+ +LH   +   G        LK+ N LV       +AD GL 
Sbjct: 135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194

Query: 156 EFKRDAEYTGT 166
                A  T  
Sbjct: 195 VRHDSATDTID 205

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             I + M YL   ++   H ++   N LV S   VKL DFGL+ +  D +Y 
Sbjct: 120 LQICKAMAYL--ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
           R    E   DI    + ++    + S    + RGM YL  ++ +  H +L A N LV   
Sbjct: 136 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTEN 193

Query: 145 WVVKLADFGLTEFKRD 160
            V+K+ADFGL    RD
Sbjct: 194 NVMKIADFGLA---RD 206

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
           R ++ +    I  +    L +  +    AD+ RGM YL  S  ++ H +L A N LV   
Sbjct: 121 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGEN 178

Query: 145 WVVKLADFGLTEFKRDAEY 163
           +V K+ADFGL+   R  E 
Sbjct: 179 YVAKIADFGLS---RGQEV 194

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 52.5 bits (127), Expect = 6e-08
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           + ++LK  +++  +  L+++   S +  +L G+ Y HD  +  H +LK  N L++    +
Sbjct: 82  LDQDLK-KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV-LHRDLKPQNLLINREGEL 139

Query: 148 KLADFGL 154
           K+ADFGL
Sbjct: 140 KIADFGL 146

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 52.9 bits (128), Expect = 6e-08
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
           M+K+LK  +++     L +  I   +  +LRG+ + H        H +LK  N L++S  
Sbjct: 101 MEKDLK-KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDG 156

Query: 146 VVKLADFGL 154
            +KLADFGL
Sbjct: 157 ALKLADFGL 165

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167
             I   M YL      + H +L A NCLV    +VK+ADFGL+       YT   
Sbjct: 118 TQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
            D   GM YL        H +L A NCLV  + V+K++DFG++  + D  Y 
Sbjct: 220 GDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
           M+ +L+  I+++  + L    I + +   L+G+ YLH     +  H +LK +N L+D   
Sbjct: 94  METDLE-VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENG 149

Query: 146 VVKLADFGL 154
           V+KLADFGL
Sbjct: 150 VLKLADFGL 158

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.5 bits (127), Expect = 7e-08
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
             ++LK    ++ +  LD   + S +  +L+G+ + H    R   H +LK  N L++   
Sbjct: 83  CDQDLK-KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNG 138

Query: 146 VVKLADFGL 154
            +KLA+FGL
Sbjct: 139 ELKLANFGL 147

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 53.2 bits (128), Expect = 8e-08
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
           A I  GM ++      Y H +L+A+N LV +  V K+ADFGL     D EYT
Sbjct: 291 AQIAEGMAFI--EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++E     L  + IA++    L+G+ YLH S    H ++KA N L+    +VKL DFG
Sbjct: 142 DLLEVHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFG 199

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           + K+LK   +++    ++   +   +  +LRG+ Y H   +  H +LK  N L++ R  +
Sbjct: 82  LDKDLK-QYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV-LHRDLKPQNLLINERGEL 139

Query: 148 KLADFGL 154
           KLADFGL
Sbjct: 140 KLADFGL 146

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
           R    E   DI    + ++    + S    + RGM YL  ++ +  H +L A N LV   
Sbjct: 182 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL--ASQKCIHRDLAARNVLVTEN 239

Query: 145 WVVKLADFGLTEFKRD 160
            V+K+ADFGL    RD
Sbjct: 240 NVMKIADFGLA---RD 252

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 111 SLVADILRGMLYLHDSALRY---------HGNLKASNCLVDSRWVVKLADFGLT 155
            +   + RG+ YLH+              H ++K+ N L+ +     +ADFGL 
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 36/121 (29%)

Query: 69  GRIFAIKRIP-KKSVDITRAMKKELKID------------------------IMENEDVK 103
           G + A+K++    + +  + +  +L +                          ME     
Sbjct: 50  GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC 109

Query: 104 LDNMF-----------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
            + +            +  +   I++ + YL +     H ++K SN L+D R  +KL DF
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF 169

Query: 153 G 153
           G
Sbjct: 170 G 170

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTE 156
                 L    +   + DI  GM YL  S+  + H +L A NC++     V +ADFGL+ 
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185

Query: 157 FKRDAEY 163
                +Y
Sbjct: 186 KIYSGDY 192

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 92  LKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLA 150
           L    +E     +    +   + DI  GM YL  S   + H +L A NC++     V +A
Sbjct: 132 LLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVA 189

Query: 151 DFGLTEFKRDAEY 163
           DFGL++     +Y
Sbjct: 190 DFGLSKKIYSGDY 202

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 35/120 (29%)

Query: 69  GRIFAIKRIP-KKSVDITRAMKKELKI--------------------DI---ME------ 98
           G + A K I  +    I   + +EL++                    +I   ME      
Sbjct: 58  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117

Query: 99  -----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                 +  ++    +  +   +++G+ YL +     H ++K SN LV+SR  +KL DFG
Sbjct: 118 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG 177

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
                 L          +L    +  + + I  GM+YL  ++  + H +L   NCLV + 
Sbjct: 112 GPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL--ASQHFVHRDLATRNCLVGAN 169

Query: 145 WVVKLADFGLTEFKRDAEYT 164
            +VK+ DFG++      +Y 
Sbjct: 170 LLVKIGDFGMSRDVYSTDYY 189

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
                    D        L+      LVA I  GM YL  S+    H +L   N LV  +
Sbjct: 107 SPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDK 164

Query: 145 WVVKLADFGLTEFKRDAEY 163
             VK++D GL      A+Y
Sbjct: 165 LNVKISDLGLFREVYAADY 183

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             I  GM YL  + + Y H +L A N LV+S  V K++DFGL+    D    
Sbjct: 154 RGIAAGMKYL--ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 39/124 (31%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
               AIK IP++    ++ + +E+ +                                  
Sbjct: 47  QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106

Query: 95  -DIMENEDVKLDN--MFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLA 150
             ++ ++   L +    I      IL G+ YLHD+ +  H ++K  N L+++   V+K++
Sbjct: 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV-HRDIKGDNVLINTYSGVLKIS 165

Query: 151 DFGL 154
           DFG 
Sbjct: 166 DFGT 169

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
                +   + YL   + R+ H ++ A N LV S   VKL DFGL+ +  D+ Y   
Sbjct: 495 LYAYQLSTALAYL--ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
           R      K+   +     L    +      + +GM +L  ++ +  H +L A N L+  +
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEK 184

Query: 145 WVVKLADFGLTEFKRD 160
            VVK+ DFGL    RD
Sbjct: 185 NVVKICDFGLA---RD 197

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
           + +  GM+YL  + L + H +L   NCLV    VVK+ DFG++      +Y 
Sbjct: 165 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWV 146
               +    ++     +    + S+    L+ + + H       H ++K  N L+    V
Sbjct: 84  CDHTVL-HELDRYQRGVPEHLVKSITWQTLQAVNFCHKH--NCIHRDVKPENILITKHSV 140

Query: 147 VKLADFGL 154
           +KL DFG 
Sbjct: 141 IKLCDFGF 148

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 8/66 (12%)

Query: 95  DIM-------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           DI+       E++   LD   IA+++ ++L G+ YLH +  + H ++KA N L+     V
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSV 160

Query: 148 KLADFG 153
           ++ADFG
Sbjct: 161 QIADFG 166

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR 144
           R    E   +   N + +L +  + S    + RGM YL  ++ +  H +L A N LV   
Sbjct: 170 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTED 227

Query: 145 WVVKLADFGLTEFKRDAEYTG 165
            V+K+ADFGL    RD  +  
Sbjct: 228 NVMKIADFGLA---RDIHHID 245

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++E     LD   IA+++ +IL+G+ YLH S  + H ++KA+N L+     VKLADFG
Sbjct: 109 DLLEPG--PLDETQIATILREILKGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFG 164

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 6/48 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
            +I  GM YL  +A ++ H +L A NC+V   + VK+ DFG+T   RD
Sbjct: 145 GEIADGMAYL--NANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RD 187

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             I +GM YL     R  H +L A N LV +   VK+ DFGL +     E  
Sbjct: 124 VQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWV 146
           +   +  D +E     LD   +   +  I+ G+ + H       H ++K  N LV    V
Sbjct: 106 VDHTIL-DDLELFPNGLDYQVVQKYLFQIINGIGFCHSH--NIIHRDIKPENILVSQSGV 162

Query: 147 VKLADFGL 154
           VKL DFG 
Sbjct: 163 VKLCDFGF 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 3e-07
 Identities = 44/270 (16%), Positives = 82/270 (30%), Gaps = 86/270 (31%)

Query: 31  DWFCSW--FQNV------HTSQVSLSSNPDSDFR--YSAIFTPIGIYKGRIFAIKRIPKK 80
           D   +W  +++V         + SL+    +++R  +  +          +F     P  
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS---------VF-----PP- 383

Query: 81  SVDITRAMKKELKI--DIMENEDVK--LDNMFIASLVA-DILRGMLYLHDSALRYHGNLK 135
           S  I   +   L +    +   DV   ++ +   SLV        + +    L     L+
Sbjct: 384 SAHIPTIL---LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 136 AS----NCLVDSRWVVKLADF-GLTEFKRDAEYTGTDQHSFLQHT-YHVNRAGSTESLHC 189
                   +VD   + K  D   L     D +Y       F  H  +H+      E    
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLD-QY-------FYSHIGHHLKNIEHPE---- 488

Query: 190 KCDEALLFEMLP---RSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVD 246
                 LF M+    R + +++R  ++                       A +    +++
Sbjct: 489 ---RMTLFRMVFLDFRFLEQKIRHDST-----------------------AWNASGSILN 522

Query: 247 FLNDL--YTCFDSIVGNYDVY--KVETIGD 272
            L  L  Y  +  I  N   Y   V  I D
Sbjct: 523 TLQQLKFYKPY--ICDNDPKYERLVNAILD 550

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 5e-07
 Identities = 71/517 (13%), Positives = 131/517 (25%), Gaps = 209/517 (40%)

Query: 11  LNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFT----PIGI 66
           ++ I+     V      +LF    S  + +    V      +  F  S I T    P  +
Sbjct: 51  IDHIIMSKDAVSGTL--RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108

Query: 67  YKGRIFAIKR-------IPKKSVDITRA-MKKELKIDIME---NEDVKLDNMFIA---SL 112
            +  I    R         K +V  +R     +L+  ++E    ++V +D +  +    +
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNV--SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166

Query: 113 VADILR----------GMLYL-------------------------------HDSALRYH 131
             D+             + +L                               H S ++  
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 132 GN-LKAS-----------NCL-----VDSRWVVKLADFG----LTEFKRDAEYT-----G 165
            + ++A            NCL     V +       +      LT   R  + T      
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT--TRFKQVTDFLSAA 284

Query: 166 TDQHSFLQHTYHVNRAGSTESLHCKCDEAL-LF--------EMLPRSV-----------A 205
           T  H  L H    +    T       DE   L         + LPR V           A
Sbjct: 285 TTTHISLDH----HSMTLTP------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 206 EQLRRG--------------------TSVEAESFDSVTIYFSDIVGFTAMSAEST--PLQ 243
           E +R G                    +S+           F  +  F      S   P  
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP----PSAHIPTI 390

Query: 244 VVDFLNDLYTCFDSIV-GNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVY-----K 297
           ++           S++  +     V  + +  +    L  +  ++  +    +Y     K
Sbjct: 391 LL-----------SLIWFDVIKSDVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVK 438

Query: 298 VE-------TIGDAYMVVSGLPIRN-------------------GEQHAGEIASMS---L 328
           +E       +I D Y +       +                     +H   +       L
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498

Query: 329 DLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGL 365
           D      RF  +       K+R   H          +
Sbjct: 499 DF-----RFLEQ-------KIR---HDSTAWNASGSI 520

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
           + ++LK  +  +    +    I S +  +L+G+ + H        H +LK  N L+++  
Sbjct: 84  LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEG 140

Query: 146 VVKLADFGL 154
            +KLADFGL
Sbjct: 141 AIKLADFGL 149

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             I  GM YL  S + Y H +L A N L++S  V K++DFGL     D    
Sbjct: 154 RGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             +  GM YL  S L Y H +L A N LVDS  V K++DFGL+    D    
Sbjct: 158 RGVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
           + ++L+  + +     L    I  L+   LRG+ +LH        H +LK  N LV S  
Sbjct: 101 VDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGG 157

Query: 146 VVKLADFGL 154
            VKLADFGL
Sbjct: 158 TVKLADFGL 166

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
            D+   M YL      + H +L A N LV    V K++DFGLT   ++A  T
Sbjct: 124 LDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASST 170

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 39/124 (31%)

Query: 68  KGRIFAIKRIPKKSVD--ITRAMKKELKI---------------DIMENEDV-------- 102
           K +I+AIK +  +  D     + + E+                 D    +          
Sbjct: 51  KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 110

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                        +D     S   ++L  +  +H   +  H +LK +N L+    ++KL 
Sbjct: 111 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIVDG-MLKLI 168

Query: 151 DFGL 154
           DFG+
Sbjct: 169 DFGI 172

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 88  MKKELKIDIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSR 144
           + ++L    ++   +  +    I  ++  +LRG+ +LH        H +LK  N LV S 
Sbjct: 101 VDQDLT-TYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSS 156

Query: 145 WVVKLADFGL 154
             +KLADFGL
Sbjct: 157 GQIKLADFGL 166

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 49.9 bits (120), Expect = 6e-07
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
             I +GM YL  + ++  H +L A N LV     +K++DFGL+   RD
Sbjct: 157 WQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLS---RD 199

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT-EFKRDAEYTGTD 167
             I +GM YL        H NL A N L+ S   V++ADFG+      D +     
Sbjct: 122 VQIAKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 39/124 (31%)

Query: 68  KGRIFAIKRIPKKSVD--ITRAMKKELKI---------------DIMENEDV-------- 102
           K +I+AIK +  +  D     + + E+                 D    +          
Sbjct: 32  KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 91

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                        +D     S   ++L  +  +H   +  H +LK +N L+    ++KL 
Sbjct: 92  NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIVDG-MLKLI 149

Query: 151 DFGL 154
           DFG+
Sbjct: 150 DFGI 153

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR-WVVKLADFGL 154
            +    + S    IL+G+ +LH       H +LK  N  +      VK+ D GL
Sbjct: 125 VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 95  DIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D+++N     L   +IA +  +ILRG+ +LH      H ++K  N L+     VKL DFG
Sbjct: 116 DLIKNTKGNTLKEEWIAYICREILRGLSHLH-QHKVIHRDIKGQNVLLTENAEVKLVDFG 174

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 49.8 bits (119), Expect = 7e-07
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 39/124 (31%)

Query: 68  KGRIFAIKRIPKKSVD--ITRAMKKELKI---------------DIMENEDV-------- 102
           K +I+AIK +  +  D     + + E+                 D    +          
Sbjct: 79  KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 138

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                        +D     S   ++L  +  +H   +  H +LK +N L+    ++KL 
Sbjct: 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIVDG-MLKLI 196

Query: 151 DFGL 154
           DFG+
Sbjct: 197 DFGI 200

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 40/125 (32%)

Query: 69  GRIFAIKRIP-KKSVDITRAMKKELKID------------------------IME----- 98
           G+I A+KRI         + +  +L +                          ME     
Sbjct: 47  GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS 106

Query: 99  ----------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK 148
                       D  +    +  +    ++ + +L ++    H ++K SN L+D    +K
Sbjct: 107 FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIK 166

Query: 149 LADFG 153
           L DFG
Sbjct: 167 LCDFG 171

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
             + +GM +L  ++    H +L A N L+    + K+ DFGL    RD
Sbjct: 152 YQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLA---RD 194

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT-EFKRDAEY 163
             I +GM YL     +Y H +L A N LV+S   VK+ DFGLT   + D EY
Sbjct: 133 VQICKGMDYLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY 182

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164
             I +GM YL     R  H +L A N LV +   VK+ DFGL +     E  
Sbjct: 124 VQIAKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           +KK +    + N    L+   +      +L+G+ + H++    H +LK  N L++ R  +
Sbjct: 89  LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQL 147

Query: 148 KLADFGL 154
           KL DFGL
Sbjct: 148 KLGDFGL 154

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT-EFKRDAEY 163
           + I +GM YL     RY H +L   N LV++   VK+ DFGLT    +D E+
Sbjct: 121 SQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 39/124 (31%)

Query: 69  GRIFAIKRIP-KKSVDITRAMKKELKID------------------------IMENEDVK 103
           G+I A+KRI    +    + +  +L I                          ME  D  
Sbjct: 32  GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTS 91

Query: 104 LDNM--------------FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL 149
           LD                 +  +   I++ + +LH      H ++K SN L+++   VK+
Sbjct: 92  LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 151

Query: 150 ADFG 153
            DFG
Sbjct: 152 CDFG 155

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
            +   +  GM YL  S  ++ H +L   NCLV    VVK+ADFGL+   R+
Sbjct: 178 CIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLS---RN 223

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
           + + +GM +L  ++    H ++ A N L+ +  V K+ DFGL    RD
Sbjct: 171 SQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RD 213

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167
            D+   M YL      + H +L A N LV    V K++DFGLT   ++   +  D
Sbjct: 296 LDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KE-ASSTQD 344

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
             + +GM +L        H +L A N LV    VVK+ DFGL    RD
Sbjct: 179 YQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLA---RD 221

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 38/123 (30%)

Query: 69  GRIFAIKRIPK---KSVDITRAMKKELKI------------------------------- 94
           GR++A+KR         D  R + +                                   
Sbjct: 82  GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGP 141

Query: 95  ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
                 E     L    +   + D L  + +LH   L  H ++K +N  +  R   KL D
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV-HLDVKPANIFLGPRGRCKLGD 200

Query: 152 FGL 154
           FGL
Sbjct: 201 FGL 203

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT-EFKRDAEY 163
           + I +GM YL     RY H +L   N LV++   VK+ DFGLT    +D EY
Sbjct: 152 SQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRW---VVKLADFG 153
            ++   L  + +  +  DI  G  YL      + H ++ A NCL+       V K+ DFG
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188

Query: 154 LTEFKRDAEYT 164
           +      A Y 
Sbjct: 189 MARDIYRASYY 199

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT 155
           + I +GM YL   + R  H +L A N LV+S   VK+ADFGL 
Sbjct: 134 SQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLA 174

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT 155
             I  GM YLH     Y H +L A N L+D+  +VK+ DFGL 
Sbjct: 141 QQICEGMAYLHA--QHYIHRDLAARNVLLDNDRLVKIGDFGLA 181

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            L  + I +L+ ++L G+ Y+H SA   H +LK +NCLV+    VK+ DFGL
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVH-SAGILHRDLKPANCLVNQDCSVKVCDFGL 202

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 11/60 (18%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRW--------VVKLADFGLTEFKRDAEYT 164
             +   M +L        HGN+ A N L+             +KL+D G++      +  
Sbjct: 120 KQLAAAMHFL--EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 95  DIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++    +  ++ + IA ++  +L+ + Y+H      H ++KAS+ L+     V L+   
Sbjct: 115 DLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLR 173

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 111 SLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRW---VVKLADFGLTEFKRDAEYT 164
            +  DI  G  YL      + H ++ A NCL+       V K+ DFG+      A Y 
Sbjct: 185 HVARDIACGCQYL--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEF--KRDAEYT 164
             +  GM YL      + H +L A N L+ +R   K++DFGL++     D+ YT
Sbjct: 117 HQVSMGMKYL--EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEF--KRDAEYTGTD 167
             +  GM YL   + R+ H +L A N L+ +R +VK+ DFGL     + D  Y   +
Sbjct: 128 VQVAEGMGYL--ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 25/134 (18%), Positives = 40/134 (29%), Gaps = 50/134 (37%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKID--------------------------------- 95
            R +AIK+I      ++     E+ +                                  
Sbjct: 31  SRYYAIKKIRHTEEKLSTI-LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89

Query: 96  ---IME------------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCL 140
               ME            +E++         L   IL  + Y+H   +  H +LK  N  
Sbjct: 90  LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI-IHRDLKPMNIF 148

Query: 141 VDSRWVVKLADFGL 154
           +D    VK+ DFGL
Sbjct: 149 IDESRNVKIGDFGL 162

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           DI+    V+L+   IA++   +L+ + YLH +    H ++K+ + L+     VKL+DFG
Sbjct: 131 DIVSQ--VRLNEEQIATVCEAVLQALAYLH-AQGVIHRDIKSDSILLTLDGRVKLSDFG 186

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            L    I +++ ++L G  ++H  +   H +LK +NCL++    VK+ DFGL
Sbjct: 125 FLTEEHIKTILYNLLLGENFIH-ESGIIHRDLKPANCLLNQDCSVKVCDFGL 175

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 114 ADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT-EFKRDAEYTGTDQHS 170
             +  GM YL      + H +L A N L+ ++   K++DFGL+   + D  Y     H 
Sbjct: 124 HQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           D++      +D   IA++  + L+ + +LH S    H ++K+ N L+     VKL DFG
Sbjct: 106 DVVTET--CMDEGQIAAVCRECLQALEFLH-SNQVIHRDIKSDNILLGMDGSVKLTDFG 161

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 40/145 (27%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------DIM----- 97
           YS +F  I I       +K +  K V   +  K+E+KI              DI+     
Sbjct: 49  YSEVFEAINITNNEKVVVKIL--KPVKKKKI-KREIKILENLRGGPNIITLADIVKDPVS 105

Query: 98  ----------ENEDVK-----LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142
                      N D K     L +  I   + +IL+ + Y H S    H ++K  N ++D
Sbjct: 106 RTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMID 164

Query: 143 SRW-VVKLADFGLTEFKR-DAEYTG 165
                ++L D+GL EF     EY  
Sbjct: 165 HEHRKLRLIDWGLAEFYHPGQEYNV 189

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +LD+  ++ L+  +L G+ +LH SA   H +LK SN +V S   +K+ DFGL
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGL 173

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 99  NEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLTEF 157
            +  ++    +A L+  +  GM YL      + H NL A N L+ +R   K++DFGL++ 
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYL--EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKA 485

Query: 158 --KRDAEYT 164
               D+ YT
Sbjct: 486 LGADDSYYT 494

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           ++ ++ + +    I   +  IL G+  LH  A   H +L   N L+     + + DF L
Sbjct: 123 VIHDQRIVISPQHIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNNDITICDFNL 180

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           KL +  +  L+  ILRG+ Y+H SA   H +LK SN  V+    +K+ DFGL
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELKILDFGL 178

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFG 153
            L        +   L G+ YLH   +  HG++KA N L+ S      L DFG
Sbjct: 146 CLPEDRALYYLGQALEGLEYLHTRRI-LHGDVKADNVLLSSDGSRAALCDFG 196

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 40/124 (32%)

Query: 69  GRIFAIKRIPK---KSVDITRAMKKELKI--------------DIM---ENEDV------ 102
           G + A+K+I      S D  R  + E+ I              +++    + DV      
Sbjct: 34  GEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                        L+ +    +V  +++ + YLH S    H ++K SN L+++   VK+A
Sbjct: 93  METDLHAVIRANILEPVHKQYVVYQLIKVIKYLH-SGGLLHRDMKPSNILLNAECHVKVA 151

Query: 151 DFGL 154
           DFGL
Sbjct: 152 DFGL 155

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 46.8 bits (112), Expect = 5e-06
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 118 RGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            G+ +LH++    H ++K++N L+D  +  K++DFGL
Sbjct: 144 NGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGL 179

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            L +  I   +   LR +  LH  +   H +LK SN L++S   +K+ DFGL
Sbjct: 108 MLSDDHIQYFIYQTLRAVKVLH-GSNVIHRDLKPSNLLINSNCDLKVCDFGL 158

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            L N  I   +  ILRG+ Y+H SA   H +LK SN L+++   +K+ DFGL
Sbjct: 124 HLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGL 174

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 51/134 (38%)

Query: 69  GRIFAIKRIPKKSVDIT--RAMK--KELK------------------------------- 93
            + +A+K+I    + ++  R +   +ELK                               
Sbjct: 48  DKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLW 107

Query: 94  --IDIM-----ENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDS- 143
             I          + V+L    + SL+  IL G+ YLH     +  H +LK +N LV   
Sbjct: 108 HIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGE 164

Query: 144 ---RWVVKLADFGL 154
              R  VK+AD G 
Sbjct: 165 GPERGRVKIADMGF 178

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 42/126 (33%)

Query: 69  GRIFAIKRIPK---KSVDITRAMKKELKI-------------DIM-------ENEDV--- 102
           G   AIK++ +     +   RA + EL +             D+           D    
Sbjct: 49  GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107

Query: 103 --------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK 148
                         K     I  LV  +L+G+ Y+H SA   H +LK  N  V+    +K
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH-SAGVVHRDLKPGNLAVNEDCELK 166

Query: 149 LADFGL 154
           + DFGL
Sbjct: 167 ILDFGL 172

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           KL    I  LV  +L+G+ Y+H +A   H +LK  N  V+    +K+ DFGL
Sbjct: 124 KLGEDRIQFLVYQMLKGLRYIH-AAGIIHRDLKPGNLAVNEDCELKILDFGL 174

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 115 DILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162
           D+++G+ YLH   +  H ++K SN LV     +K+ADFG++   + ++
Sbjct: 145 DLIKGIEYLHYQKI-IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL- 154
           I +    KLD +    L   I +G+ Y+H   L  + +LK SN  +     VK+ DFGL 
Sbjct: 111 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKL-INRDLKPSNIFLVDTKQVKIGDFGLV 169

Query: 155 TEFKRDAEYT---GT 166
           T  K D + T   GT
Sbjct: 170 TSLKNDGKRTRSKGT 184

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 116 ILRGMLYLHDSALR-YHGNLKASNCLVD-SRWVVKLADFGL 154
           ++R +  LH  ++   H ++K  N LV+ +   +KL DFG 
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGS 178

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 118 RGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           RG+ YLH  A+  H ++K+ N L+D  +V K+ DFG+
Sbjct: 150 RGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGI 185

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           +LD+  ++ L+  +L G+ +LH SA   H +LK SN +V S   +K+ DFGL
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 98  ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157
           +N    +    I  ++  +L    Y+H+     H ++K SN L+D    VKL+DFG +E+
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201

Query: 158 KRD 160
             D
Sbjct: 202 MVD 204

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 105 DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL---TEFKRDA 161
           ++     +   I   + +LH   L  H +LK SN       VVK+ DFGL    +   + 
Sbjct: 162 EHGVCLHIFIQIAEAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 220

Query: 162 EYTGTDQHSFLQHTYHV 178
           +   T   ++  HT  V
Sbjct: 221 QTVLTPMPAYATHTGQV 237

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 1/45 (2%)

Query: 110 ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             L A ++R    L    L  HG+    N  +     + L D   
Sbjct: 197 HILTAQLIRLAANLQSKGL-VHGHFTPDNLFIMPDGRLMLGDVSA 240

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGL 154
           + R + ++H S    H ++K  N LV+S+   +KL DFG 
Sbjct: 150 LFRAVGFIH-SLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.8 bits (103), Expect = 6e-05
 Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 10/100 (10%)

Query: 110 ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL-TEFKRDAEYTGTDQ 168
             L   ++R +  LH   L  H  L+  + ++D R  V L  F            + +  
Sbjct: 209 LQLTLQVIRLLASLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRG 267

Query: 169 HS---FLQHTYHVNRAGSTESLH-CKCDE----ALLFEML 200
                       ++      +L     D      +++ + 
Sbjct: 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160
           ++  + YL    +  H ++K  N ++   + +KL DFG   +   
Sbjct: 139 LVSAVGYLRLKDI-IHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 115 DILRGMLYLHDSALRY-HGNLKASNCLVDSRWVVKLADFGLT 155
            + +GM +L  ++ +  H +L A N L+  + VVK+ DFGL 
Sbjct: 201 QVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLA 240

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 43.2 bits (102), Expect = 8e-05
 Identities = 22/161 (13%), Positives = 46/161 (28%), Gaps = 46/161 (28%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
           GR +A+KR+     +  RA+ +E+                                    
Sbjct: 53  GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112

Query: 95  ---------DIMENEDVK--LDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVD 142
                    + ++  + +  L    +  +     R + ++H       H +LK  N L+ 
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172

Query: 143 SRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGS 183
           ++  +KL DFG                        + R  +
Sbjct: 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 12/74 (16%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY--HGNLKASNCLVDSRW 145
            + +LK   M+     +    I S +  ++ G+ + H    R   H +LK  N L+    
Sbjct: 115 AENDLK-KYMDKN-PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSD 169

Query: 146 -----VVKLADFGL 154
                V+K+ DFGL
Sbjct: 170 ASETPVLKIGDFGL 183

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGL 154
           + R + Y+H S    H ++K  N L+D    V+KL DFG 
Sbjct: 165 LFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADF 152
                     +  + I   +  +LR + Y+H S    H ++K  N L+D    V+KL DF
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDF 186

Query: 153 GL 154
           G 
Sbjct: 187 GS 188

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 12/63 (19%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV-----------VKLAD 151
            +    + S    +L  +  +H      HG++K  N ++ + ++           + L D
Sbjct: 168 VMPQGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALID 226

Query: 152 FGL 154
            G 
Sbjct: 227 LGQ 229

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL-TEFKRDAE 162
           I+ G  YLH + +  H +LK  N  ++    VK+ DFGL T+ + D E
Sbjct: 124 IVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 93  KIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY----HGNLKASNCLVDSRWVVK 148
            I     E   LD  F+  ++  +   +   H  +       H +LK +N  +D +  VK
Sbjct: 97  VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVK 156

Query: 149 LADFGL-TEFKRDAEYTGT 166
           L DFGL      D  +  T
Sbjct: 157 LGDFGLARILNHDTSFAKT 175

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGL 154
            L        +  +LRG+ Y+H SA   H +LK +N  +++   V+K+ DFGL
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIH-SANVLHRDLKPANLFINTEDLVLKIGDFGL 167

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 47/136 (34%)

Query: 69  GRIFAIKRIPKKSVDITRAMKK---ELKI-------------DIMENEDVKLDNMFI--- 109
             +FA K +PK  +      +K   E+ I                E+ D     +F+   
Sbjct: 66  KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----FVFVVLE 121

Query: 110 ----------------------ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
                                    +  I+ G  YLH + +  H +LK  N  ++    V
Sbjct: 122 LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEV 180

Query: 148 KLADFGL-TEFKRDAE 162
           K+ DFGL T+ + D E
Sbjct: 181 KIGDFGLATKVEYDGE 196

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 118 RGMLYLH-DSALR-YHGNLKASNCLVDSRWVVKLADFGL 154
           RG+ YLH     +  H ++KA+N L+D  +   + DFGL
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 22/129 (17%), Positives = 37/129 (28%), Gaps = 43/129 (33%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
           G  +A+KRI           ++E  +                                  
Sbjct: 54  GHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113

Query: 95  -----DIMENEDVKLDNM---FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV 146
                + +E    K + +    I  L+  I RG+  +H      H +LK +N L+     
Sbjct: 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY-AHRDLKPTNILLGDEGQ 172

Query: 147 VKLADFGLT 155
             L D G  
Sbjct: 173 PVLMDLGSM 181

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 108 FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            +      +   + ++H   +  H ++K +N  + +  VVKL D GL
Sbjct: 137 TVWKYFVQLCSALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGL 182

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT---EFKRD 160
            +      +   I   + +LH   L  H +LK SN       VVK+ DFGL    +   +
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173

Query: 161 AEYTGTDQHSFLQHTYHV 178
            +   T   ++ +HT  V
Sbjct: 174 EQTVLTPMPAYARHTGQV 191

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           I+  + Y H   +  H +LKA N L+D+   +K+ADFG +           
Sbjct: 123 IVSAVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGL 154
           I +L++DI   + YLH++ +  H +LK  N ++     R + K+ D G 
Sbjct: 123 IRTLLSDISSALRYLHENRI-IHRDLKPENIVLQPGPQRLIHKIIDLGY 170

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           IL  + Y H   +  H +LK  N L+D+    K+ADFGL+    D E+  T
Sbjct: 120 ILSAVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 169

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 45/130 (34%)

Query: 69  GRIFAIKRIPKKSV-DITRAMKKELKI-------------DIMENED------------- 101
           G +FAIK     S         +E ++              I E                
Sbjct: 34  GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93

Query: 102 -------VKLDNMF------IASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSR 144
                   +  N +         ++ D++ GM +L ++ +  H N+K  N +     D +
Sbjct: 94  GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI-VHRNIKPGNIMRVIGEDGQ 152

Query: 145 WVVKLADFGL 154
            V KL DFG 
Sbjct: 153 SVYKLTDFGA 162

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 45/130 (34%)

Query: 69  GRIFAIKRIPKKSV-DITRAMKKELKI-------------DIMENED------------- 101
           G +FAIK     S         +E ++              I E                
Sbjct: 34  GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93

Query: 102 -------VKLDNMF------IASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSR 144
                   +  N +         ++ D++ GM +L ++ +  H N+K  N +     D +
Sbjct: 94  GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI-VHRNIKPGNIMRVIGEDGQ 152

Query: 145 WVVKLADFGL 154
            V KL DFG 
Sbjct: 153 SVYKLTDFGA 162

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           I+  + Y H   +  H +LK  N L+D    VK+ADFGL+    D  +  T
Sbjct: 117 IICAIEYCHRHKI-VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT 166

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 110 ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             L   ++R +  LH   L  H  L+  + ++D R  V L  F  
Sbjct: 214 LQLTLQVIRLLASLHHYGL-VHTYLRPVDIVLDQRGGVFLTGFEH 257

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166
           IL G+ Y H   +  H +LK  N L+D+    K+ADFGL+    D E+  T
Sbjct: 125 ILSGVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT 174

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 52/145 (35%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELK------IDIMENED-----VKL-------DNMFI- 109
           G  FA+K +   +  ++    +E++        I+         + L         MF+ 
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178

Query: 110 ------------------------ASLVADILRGMLYLHDSALRYHG----NLKASNCLV 141
                                    S++  +L  + +LH      +     +LK  N L+
Sbjct: 179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA-----NNIVHRDLKPENILL 233

Query: 142 DSRWVVKLADFGLTEFKRDAEYTGT 166
           D    ++L+DFG +      E    
Sbjct: 234 DDNMQIRLSDFGFSCHLEPGEKLRE 258

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 116 ILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAEYT 164
           ++  + + H   +  H ++K  N L+D R    KL DFG      D  YT
Sbjct: 148 VVAAIQHCHSRGV-VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT 196

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 83  DITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142
           D+ + +  +  +   E++        I      I   + ++HD  +  H ++K+ N  + 
Sbjct: 109 DLFKRINAQKGVLFQEDQ--------ILDWFVQICLALKHVHDRKI-LHRDIKSQNIFLT 159

Query: 143 SRWVVKLADFGL-TEFKRDAEYTGT 166
               V+L DFG+        E    
Sbjct: 160 KDGTVQLGDFGIARVLNSTVELARA 184

>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Length = 66

 Score = 36.6 bits (85), Expect = 9e-04
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 193 EALLFEMLPRSVAEQLR 209
           + LL+ +LP SVA +LR
Sbjct: 48  DTLLYSVLPPSVANELR 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	392
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	100.0
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	100.0
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	100.0
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	100.0
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	100.0
2w01_A	208	Adenylate cyclase; guanylyl cyclase, class III nuc	100.0
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	100.0
1wc3_A	219	Adenylate cyclase; soluble adenylyl cyclase, CAMP	99.98
3r5g_A	198	CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas	99.98
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	99.96
1ybt_A	184	Hydrolase, alpha/beta hydrolase fold family; cycla	99.96
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
3mr7_A	189	Adenylate/guanylate cyclase/hydrolase, alpha/beta	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.93
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.92
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.89
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.87
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.87
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.87
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.87
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.87
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.87
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.87
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.87
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.87
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.87
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.87
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.87
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.87
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.87
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.87
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.87
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.86
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.86
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.86
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.86
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.86
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.86
3niz_A	311	Rhodanese family protein; structural genomics, str	99.86
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.86
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.86
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.86
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.86
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.86
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.86
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.86
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.86
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.86
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.86
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.86
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.86
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.86
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.86
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.86
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.86
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.86
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.86
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.86
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.86
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.85
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.85
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.85
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.85
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.85
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.85
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.85
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.85
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.85
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.85
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.85
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.85
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.85
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.85
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.85
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.85
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.85
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.85
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.85
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.85
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.85
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.85
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.85
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.84
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.84
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.84
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.84
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.84
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.84
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.84
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.84
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.84
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.84
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.84
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.84
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.84
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.84
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.84
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.84
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.84
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.84
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.84
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.84
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.84
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.84
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.84
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.84
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.84
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.83
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.83
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.83
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.83
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.83
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.83
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.83
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.83
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.83
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.83
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.83
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.83
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.83
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.83
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.83
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.83
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.83
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.83
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.83
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.83
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.83
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.83
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.83
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.82
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.82
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.82
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.82
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.82
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.82
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.82
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.82
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.82
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.82
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.82
3uqc_A	286	Probable conserved transmembrane protein; structur	99.82
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.82
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.82
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.81
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.81
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.81
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.81
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.81
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.81
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.81
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.81
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.81
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.81
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.81
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.8
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.8
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.8
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.8
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.8
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.8
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.8
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.8
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.8
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.8
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.8
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.8
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.8
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.8
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.8
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.79
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.79
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.79
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.79
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.79
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.79
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.78
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.78
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.78
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.77
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.77
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.77
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.75
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.72
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.71
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.7
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.65
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.65
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.41
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.16
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.16
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.02
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.08
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.96
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.79
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.72
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.58
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.12
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	94.09
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	93.64
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	93.63
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	93.56
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	93.18
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	93.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	92.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	92.9
4aoj_A	329	High affinity nerve growth factor receptor; transf	92.72
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	92.39
2qv6_A	268	MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY	91.54
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	91.44
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	91.35
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	90.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	90.38
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	90.31
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	89.89
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	89.65
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	89.62
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	89.26
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	89.21
3ats_A	357	Putative uncharacterized protein; hypothetical pro	88.75
3i5c_A	206	Fusion of general control protein GCN4 and WSPR R	88.32
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	88.09
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	87.17
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	86.85
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	85.59
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	85.5
3tvk_A	179	DGC, diguanylate cyclase YDEH; putative zinc senso	85.41
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	84.3
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	84.22
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	83.97
3pjx_A	430	Cyclic dimeric GMP binding protein; ggdef-EAL tand	82.82
3hva_A	177	Protein FIMX; ggdef diguanylate cyclase, biofilm,	82.66
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	81.62
3ign_A	177	Diguanylate cyclase; ggdef domain, A1U3W3_marav, N	81.2

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=259.39  Aligned_cols=147  Identities=51%  Similarity=0.837  Sum_probs=132.3

Q ss_pred             CCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccc
Q psy6828         211 GTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAV  290 (392)
Q Consensus       211 ~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~  290 (392)
                      ++....+++++++++|+||++||.+++.++|++++.+||++|+.+++++.+|+|+++|++||+|||+||+|..       
T Consensus         4 g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~-------   76 (225)
T 3uvj_A            4 GQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKE-------   76 (225)
T ss_dssp             -CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSC-------
T ss_pred             CCccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCC-------
Confidence            4556677889999999999999999999999999999999999999999999999999999999888887732       


Q ss_pred             ccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCcee
Q psy6828         291 GNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRY  370 (392)
Q Consensus       291 ~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y  370 (392)
                                               .++|+.+|+.+|++|++.+++++..  ...++++|||||+|+|++|++|+++++|
T Consensus        77 -------------------------~~~~a~~a~~~al~~~~~~~~~~~~--~~~~l~~riGih~G~v~~G~iG~~~~~~  129 (225)
T 3uvj_A           77 -------------------------SDTHAVQIALMALKMMELSDEVMSP--HGEPIKMRIGLHSGSVFAGVVGVKMPRY  129 (225)
T ss_dssp             -------------------------CTTHHHHHHHHHHHHHHHHTTSBCT--TSCBCCEEEEEEEEEEEEEEECC-CCEE
T ss_pred             -------------------------chHHHHHHHHHHHHHHHHHHHHHhh--cCCceEEEEEEEeccEEEEEecCCCceE
Confidence                                     2469999999999999999987643  3467999999999999999999988899


Q ss_pred             eeecchHHHHHhhhhcCCCCC
Q psy6828         371 CLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       371 ~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      |+|||+||+|||||++++||.
T Consensus       130 ~~~Gd~VN~AaRle~~a~~~~  150 (225)
T 3uvj_A          130 CLFGNNVTLANKFESCSVPRK  150 (225)
T ss_dssp             EEESHHHHHHHHHHHTSCTTC
T ss_pred             EEECcHHHHHHHHHhcCCCCe
Confidence            999999999999999999874

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*

Probab=100.00  E-value=3.7e-34  Score=255.42  Aligned_cols=159  Identities=33%  Similarity=0.589  Sum_probs=131.9

Q ss_pred             cCCCccccccCceEEEeecccchhhhhccCC----hhhHHHhHHHHHHHHHHhhhhc---CeEEEeeeCceeeeccCCCc
Q psy6828         210 RGTSVEAESFDSVTIYFSDIVGFTAMSAEST----PLQVVDFLNDLYTCFDSIVGNY---DVYKVETIGDAYMVVSGLPI  282 (392)
Q Consensus       210 ~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~----p~~l~~~Ln~~~~~~~~~v~~~---~g~~~~~~Gd~~~a~~g~~~  282 (392)
                      +++....+.+++++++|+||+|||.+++.++    |++++.+||++|..+++++.+|   +|+++|++||+|||+||.|.
T Consensus         3 ~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~   82 (220)
T 1ab8_A            3 KNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSA   82 (220)
T ss_dssp             ----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCC
T ss_pred             CCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCc
Confidence            3455667888999999999999999999874    7899999999999999999987   88999999999999999885


Q ss_pred             CCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEee
Q psy6828         283 RNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGV  362 (392)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~  362 (392)
                      .......            .|         ....++|+.+|++||++|++.+++++..  ...++++|||||+|+|++|+
T Consensus        83 ~~~~~~~------------~~---------~~~~~~~a~~a~~~Al~~~~~l~~~~~~--~~~~l~~rIGIh~G~v~~G~  139 (220)
T 1ab8_A           83 IPSQEHA------------QE---------PERQYMHIGTMVEFAYALVGKLDAINKH--SFNDFKLRVGINHGPVIAGV  139 (220)
T ss_dssp             SCCC-----------------------------CCHHHHHHHHHHHHHHHHHHHHHTT--TTCCCCCEEEEEEEEEEEEE
T ss_pred             ccccccc------------cc---------ccccHHHHHHHHHHHHHHHHHHHHHhhc--cCCceEEEEEEEeeeEEEEe
Confidence            3211000            00         0123469999999999999999998743  45689999999999999999


Q ss_pred             eccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         363 VGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       363 iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      +|+.+++||+|||+||+|||||++++||.
T Consensus       140 iG~~r~~y~v~Gd~VN~AaRle~~a~~g~  168 (220)
T 1ab8_A          140 IGAQKPQYDIWGNTVNVASRMDSTGVLDK  168 (220)
T ss_dssp             ECSSSCEEEEESHHHHHHHHHHHTCCTTC
T ss_pred             ecCCceeEEEECcHHHHHHHHHhcCCCCe
Confidence            99987799999999999999999999974

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*

Probab=100.00  E-value=4e-34  Score=254.24  Aligned_cols=146  Identities=32%  Similarity=0.568  Sum_probs=131.9

Q ss_pred             CCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccc
Q psy6828         212 TSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVG  291 (392)
Q Consensus       212 ~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~  291 (392)
                      .....+.+++++++|+||+|||.+++.++|++++.+||++|..+++++.+|+|+++|++||+|||+||.|..        
T Consensus        25 ~~l~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~--------   96 (220)
T 1azs_A           25 HKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEA--------   96 (220)
T ss_dssp             CCCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSC--------
T ss_pred             ccccccccccEEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCeEEEEECCCCC--------
Confidence            345566778999999999999999999999999999999999999999999999999999999888887732        


Q ss_pred             cccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceee
Q psy6828         292 NYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYC  371 (392)
Q Consensus       292 ~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~  371 (392)
                                              .++|+.+|++||++|++.+++++...  ..++++|||||+|+|++|++|+.+++||
T Consensus        97 ------------------------~~~~a~~Av~~Al~m~~~l~~~~~~~--~~~l~irIGI~tG~v~~G~vG~~~~~y~  150 (220)
T 1azs_A           97 ------------------------RADHAHCCVEMGMDMIEAISLVREMT--GVNVNMRVGIHSGRVHCGVLGLRKWQFD  150 (220)
T ss_dssp             ------------------------CSTHHHHHHHHHHHHHHHHHHHHHHH--CSCCEEEEEEEEEEEEEEECSSSSCCCE
T ss_pred             ------------------------ChHHHHHHHHHHHHHHHHHHHHHhhc--CCCcEEEEEEEEeEEEEEEeCCCCcEEE
Confidence                                    24699999999999999999886432  3589999999999999999999878999


Q ss_pred             eecchHHHHHhhhhcCCCCC
Q psy6828         372 LFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       372 ~~G~~Vn~AsRle~~~~~g~  391 (392)
                      +|||+||+|||||++++||.
T Consensus       151 v~Gd~VN~AaRLe~~a~~g~  170 (220)
T 1azs_A          151 VWSNDVTLANHMEAGGKAGR  170 (220)
T ss_dssp             EESHHHHHHHHHHHTCCTTS
T ss_pred             EEchHHHHHHHHHhcCCCCe
Confidence            99999999999999999974

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B

Probab=100.00  E-value=9.1e-34  Score=252.51  Aligned_cols=145  Identities=49%  Similarity=0.839  Sum_probs=130.2

Q ss_pred             CCccccccCceEEEeecccchhhhhccCC----hhhHHHhHHHHHHHHHHhhh---hcCeEEEeeeCceeeeccCCCcCC
Q psy6828         212 TSVEAESFDSVTIYFSDIVGFTAMSAEST----PLQVVDFLNDLYTCFDSIVG---NYDVYKVETIGDAYMVVSGLPIRN  284 (392)
Q Consensus       212 ~~~~~~~~~~vtvlf~DI~~ft~l~~~~~----p~~l~~~Ln~~~~~~~~~v~---~~~g~~~~~~Gd~~~a~~g~~~~~  284 (392)
                      +...++.+++++++|+||+|||.+++.++    |++++.+||++|+.+++++.   +|+|+++|++||+|||+||.|.. 
T Consensus         3 ~~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~-   81 (219)
T 2wz1_A            3 RPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEP-   81 (219)
T ss_dssp             --CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSC-
T ss_pred             CccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCC-
Confidence            44556778899999999999999999999    99999999999999999999   88999999999999888887732 


Q ss_pred             CCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeec
Q psy6828         285 GEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVG  364 (392)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG  364 (392)
                                                     .++|+.+|++||++|++.+++++..   ..++++|||||+|+|++|++|
T Consensus        82 -------------------------------~~~~a~~A~~~Al~~~~~~~~~~~~---~~~l~~rIGi~~G~v~~G~iG  127 (219)
T 2wz1_A           82 -------------------------------CIHHARSICHLALDMMEIAGQVQVD---GESVQITIGIHTGEVVTGVIG  127 (219)
T ss_dssp             -------------------------------CTTHHHHHHHHHHHHHHHHTTCEET---TEECCEEEEEEEEEEEEEEEC
T ss_pred             -------------------------------ChhHHHHHHHHHHHHHHHHHHHhcc---CCceEEEEEEEEEEEEEEEeC
Confidence                                           2469999999999999999988642   567999999999999999999


Q ss_pred             cCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         365 LKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       365 ~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      +.+++||+|||+||+|||||++++||.
T Consensus       128 ~~~~~~~v~Gd~VN~AaRLe~~a~~~~  154 (219)
T 2wz1_A          128 QRMPRYCLFGNTVNLTSRTETTGEKGK  154 (219)
T ss_dssp             SSSCEEEEESHHHHHHHHHHHTSCTTS
T ss_pred             CCceEEEEECHHHHHHHHHHhcCCCCe
Confidence            987799999999999999999999874

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B

Probab=100.00  E-value=1.8e-32  Score=239.29  Aligned_cols=143  Identities=49%  Similarity=0.833  Sum_probs=127.4

Q ss_pred             cccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhc-CeEEEeeeCceeeeccCCCcCCCCccccccc
Q psy6828         215 EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNY-DVYKVETIGDAYMVVSGLPIRNGEQHAVGNY  293 (392)
Q Consensus       215 ~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~-~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~  293 (392)
                      +++++++++++|+||++||.+++.++|+++..+||++|+.+++++.+| |+.++|++||++||+||.|..          
T Consensus         3 ~~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~g~~~vk~~GD~~~a~fg~~~~----------   72 (190)
T 3et6_A            3 PAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETIGDAYMVVCNVTVP----------   72 (190)
T ss_dssp             CCEEEEEEEEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHGGGCTTEEEEECTTSCEEEEESSSSC----------
T ss_pred             CccccceEEEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeCCEEEEEECCCCC----------
Confidence            356678999999999999999999999999999999999999999999 778889999999888887732          


Q ss_pred             cccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeee
Q psy6828         294 DVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLF  373 (392)
Q Consensus       294 ~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~  373 (392)
                                            .++|+.+|+++|++|++.+++++..  ...++++|||||+|+|++|++|+.+++||+|
T Consensus        73 ----------------------~~~~~~~a~~~al~~~~~~~~~~~~--~~~~l~~riGi~~G~v~~g~vG~~~~~~~v~  128 (190)
T 3et6_A           73 ----------------------CDDHADVLLEFALRMHEEASRVASS--LGEPVRIRVGMHSGPVVAGVVGRKMPRFXLF  128 (190)
T ss_dssp             ----------------------CSTHHHHHHHHHHHHHHHHHTSCCC-----CCCEEEEEEEEEEEEEEECSSSCEEEEE
T ss_pred             ----------------------chhHHHHHHHHHHHHHHHHHHHHhc--cCCCceEEEEEEeccEEEEecCCCcceEEec
Confidence                                  2469999999999999999986532  3467999999999999999999988899999


Q ss_pred             cchHHHHHhhhhcCCCCC
Q psy6828         374 GDTVNTASRMESTGEDVV  391 (392)
Q Consensus       374 G~~Vn~AsRle~~~~~g~  391 (392)
                      |++||+|+|||++++||.
T Consensus       129 G~~Vn~Aarl~~~a~~~~  146 (190)
T 3et6_A          129 GDTVNTASRMESHGEAGQ  146 (190)
T ss_dssp             SHHHHHHHHHHHTSCTTS
T ss_pred             CcchhHHHHHHhcCCCCe
Confidence            999999999999999974

>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}

Probab=100.00  E-value=1.2e-32  Score=243.65  Aligned_cols=143  Identities=25%  Similarity=0.352  Sum_probs=128.2

Q ss_pred             cccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccc
Q psy6828         217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVY  296 (392)
Q Consensus       217 ~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~  296 (392)
                      .+.++++++|+||++||.+++.++|+++..+||++|+.+++++.+|+|+++|++||++||+||.|..             
T Consensus        10 ~e~~~vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~-------------   76 (208)
T 2w01_A           10 GDRRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTS-------------   76 (208)
T ss_dssp             CEEEEEEEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSC-------------
T ss_pred             CeEEEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCEEEEEECCCCC-------------
Confidence            4467899999999999999999999999999999999999999999999999999999888887732             


Q ss_pred             ceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccC--CCCCCceEEEEeeccceeEeeeccCCc-eeeee
Q psy6828         297 KVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH--RPHDDLKLRIGIHSGPVCAGVVGLKMP-RYCLF  373 (392)
Q Consensus       297 ~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~--~~~~~~~~~iGi~~G~v~~g~iG~~~~-~y~~~  373 (392)
                                         .++|+.+|+.||++|++.+++++...  ....++++|||||+|+|++|++|+.++ +||+|
T Consensus        77 -------------------~~~~a~~Av~~Al~~~~~l~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~r~~~~v~  137 (208)
T 2w01_A           77 -------------------QQDDALRAVACGVEMQLALREVNQQVTGLGLQPLEMGIGINTGEVVVGNIGSEKRTKYGVV  137 (208)
T ss_dssp             -------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEEEEECSSCEEEEEE
T ss_pred             -------------------ChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeEEEEEEeCCCCeeEEEEE
Confidence                               24699999999999999999876432  234579999999999999999998665 99999


Q ss_pred             cchHHHHHhhhhcCCCCC
Q psy6828         374 GDTVNTASRMESTGEDVV  391 (392)
Q Consensus       374 G~~Vn~AsRle~~~~~g~  391 (392)
                      |++||+|+|||+++.||.
T Consensus       138 G~~Vn~AaRl~~~a~~~~  155 (208)
T 2w01_A          138 GAQVNLTYRIESYTTGGQ  155 (208)
T ss_dssp             SHHHHHHHHHHHTCCTTC
T ss_pred             CHHHHHHHHHHccCCCCe
Confidence            999999999999998874

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.8e-33  Score=248.12  Aligned_cols=143  Identities=41%  Similarity=0.722  Sum_probs=129.1

Q ss_pred             cccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccc
Q psy6828         215 EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYD  294 (392)
Q Consensus       215 ~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~  294 (392)
                      .++.+++++++|+||++||.+++.++|++++.+||++|+.+++++.+|+|+++|++||++||+||.|..           
T Consensus         4 ~~~~~~~vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~gG~v~k~~GD~~ma~fg~p~~-----------   72 (204)
T 1yk9_A            4 IADKYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVSGDSYMVVSGVPRP-----------   72 (204)
T ss_dssp             --CCCSCEEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGGTTSSCEECCCSSSCEEEESCCSSC-----------
T ss_pred             CccccCcEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCeEEEEECCCCC-----------
Confidence            456778999999999999999999999999999999999999999999999999999999888888732           


Q ss_pred             ccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeec
Q psy6828         295 VYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFG  374 (392)
Q Consensus       295 ~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G  374 (392)
                                           .++|+.+|++||++|++.+++++..  ...++++|||||+|+|++|++|+++++||+||
T Consensus        73 ---------------------~~~~a~~A~~~Al~~~~~~~~~~~~--~~~~l~~rIGI~tG~v~~g~vG~~r~~~~v~G  129 (204)
T 1yk9_A           73 ---------------------RPDHTQALADFALDMTNVAAQLKDP--RGNPVPLRVGLATGPVVAGVVGSRRFRYCVWG  129 (204)
T ss_dssp             ---------------------CTTHHHHHHTHHHHHHHHTTTCCSS--SCCCCCEEEEEEEECEEECCCCSSSCCCCEEE
T ss_pred             ---------------------ChHHHHHHHHHHHHHHHHHHHHHhc--cCCCceEEEEEEeeEEEEEEecCCCceEEEEC
Confidence                                 2469999999999999999987643  34679999999999999999999766999999


Q ss_pred             chHHHHHhhhhcCCCCC
Q psy6828         375 DTVNTASRMESTGEDVV  391 (392)
Q Consensus       375 ~~Vn~AsRle~~~~~g~  391 (392)
                      |+||+|+|||++++||.
T Consensus       130 ~~Vn~AaRle~~a~~g~  146 (204)
T 1yk9_A          130 DAVNVASRMESTDSVGQ  146 (204)
T ss_dssp             HHHHHTTHHHHSCSTTC
T ss_pred             hHHHHHHHHHhcCCCCe
Confidence            99999999999999874

>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*

Probab=99.98  E-value=2e-32  Score=243.98  Aligned_cols=145  Identities=25%  Similarity=0.352  Sum_probs=128.1

Q ss_pred             cccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccc
Q psy6828         217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVY  296 (392)
Q Consensus       217 ~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~  296 (392)
                      ...+.++++|+||++||.+++.++|+++.++||++|+.+++++.+|+|+++|++||+|||+||.|...            
T Consensus        23 ~e~~~vtvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~------------   90 (219)
T 1wc3_A           23 PEPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEM------------   90 (219)
T ss_dssp             CEEEEEEEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCC------------
T ss_pred             CceeEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCeEEEEECCCCCC------------
Confidence            34578999999999999999999999999999999999999999999999999999998888877321            


Q ss_pred             ceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccC--------CCCCCceEEEEeeccceeEeeeccCCc
Q psy6828         297 KVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH--------RPHDDLKLRIGIHSGPVCAGVVGLKMP  368 (392)
Q Consensus       297 ~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~--------~~~~~~~~~iGi~~G~v~~g~iG~~~~  368 (392)
                                        ..++|+.+|++||++|++.+++++..+        ....++++|||||+|+|++|++|+.++
T Consensus        91 ------------------~~~~~a~~Av~~Al~~~~~l~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~r  152 (219)
T 1wc3_A           91 ------------------SPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQER  152 (219)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSTTCCCCEEEEEEEEEEEEEEEEEETTE
T ss_pred             ------------------CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCccEEEEEEEeceEEEEEcCCCCe
Confidence                              124689999999999999999876432        134679999999999999999998665


Q ss_pred             -eeeeecchHHHHHhhhhcCCCCC
Q psy6828         369 -RYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       369 -~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                       +||+|||+||+|+|||++++||.
T Consensus       153 ~~y~v~Gd~VN~AaRLe~~a~~g~  176 (219)
T 1wc3_A          153 SDFTAIGPSVNIAARLQEATAPNS  176 (219)
T ss_dssp             EEEEEESHHHHHHHHHHHHSCTTE
T ss_pred             eEEEEECHHHHHHHHHHhcCCCCe
Confidence             99999999999999999999874

>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0

Probab=99.98  E-value=2.2e-32  Score=240.38  Aligned_cols=145  Identities=30%  Similarity=0.432  Sum_probs=128.7

Q ss_pred             cccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccc
Q psy6828         217 ESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVY  296 (392)
Q Consensus       217 ~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~  296 (392)
                      .+.++++++|+||++||.+++.++|+++..+||++|+.+++++.+|+|+++|++||++||+||.|...            
T Consensus         5 ~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~------------   72 (198)
T 3r5g_A            5 TQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQ------------   72 (198)
T ss_dssp             CEEEEEEEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEETTEEEEEESSSSCS------------
T ss_pred             ceEEEEEEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeeeCCEEEEEECCCccc------------
Confidence            34578999999999999999999999999999999999999999999999999999998888877321            


Q ss_pred             ceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCC---CCCCceEEEEeeccceeEeeeccCCc-eeee
Q psy6828         297 KVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHR---PHDDLKLRIGIHSGPVCAGVVGLKMP-RYCL  372 (392)
Q Consensus       297 ~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~---~~~~~~~~iGi~~G~v~~g~iG~~~~-~y~~  372 (392)
                                        ..++|+.+|+.+|++|++.+++++..+.   ...++++|||||+|+|++|++|+..+ +||+
T Consensus        73 ------------------~~~~~a~~a~~~al~i~~~~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~~v  134 (198)
T 3r5g_A           73 ------------------GAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTI  134 (198)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEEEEEEEeCCCcceEEEE
Confidence                              1246899999999999999998764332   23579999999999999999999866 9999


Q ss_pred             ecchHHHHHhhhhcCCCCC
Q psy6828         373 FGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       373 ~G~~Vn~AsRle~~~~~g~  391 (392)
                      |||+||+|+|||++++||.
T Consensus       135 ~G~~Vn~Aarl~~~a~~~~  153 (198)
T 3r5g_A          135 IGREVNLASRLESASEAGE  153 (198)
T ss_dssp             ESHHHHHHHHHHHHCCTTC
T ss_pred             ECcHHHHHHHHHhhCCCCc
Confidence            9999999999999999974

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A

Probab=99.96  E-value=5.3e-30  Score=231.23  Aligned_cols=138  Identities=28%  Similarity=0.383  Sum_probs=119.2

Q ss_pred             CccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccc
Q psy6828         213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGN  292 (392)
Q Consensus       213 ~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~  292 (392)
                      ..+++.+++++++|+||++||.+++.. |+++.++||++|+.+++++.+|+|+++|++||+|||+||.|           
T Consensus         4 ~~~~~~~~~vtvlF~DI~gfT~l~~~~-~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~ma~fg~p-----------   71 (235)
T 1fx2_A            4 RAPKEPTDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSP-----------   71 (235)
T ss_dssp             GSCCCTTSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCH-----------
T ss_pred             cCCCCCCCcEEEEEEeccChHHHHHHC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCeEEEEeCCH-----------
Confidence            345677789999999999999999986 99999999999999999999999999999999998888765           


Q ss_pred             ccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccC---------------------C---------
Q psy6828         293 YDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH---------------------R---------  342 (392)
Q Consensus       293 ~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~---------------------~---------  342 (392)
                                                  .+|+++|++|++.+.+.++..                     .         
T Consensus        72 ----------------------------~~A~~~Al~i~~~l~~~~w~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~  123 (235)
T 1fx2_A           72 ----------------------------FAAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPE  123 (235)
T ss_dssp             ----------------------------HHHHHHHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHH
T ss_pred             ----------------------------HHHHHHHHHHHHHHHhCCCchhHhhhhhhhhhhhccccccccCccccccccc
Confidence                                        247888999998886543221                     0         


Q ss_pred             ----CCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         343 ----PHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       343 ----~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                          ...++++|||||+|+|++|++|. +++||+|||+||+|||||++|+||.
T Consensus       124 ~~~~~~~~l~~riGIh~G~v~~G~~G~-~~~~~v~Gd~VN~AaRle~~a~~g~  175 (235)
T 1fx2_A          124 VYSRLWNGLRVRVGIHTGLCDIRHDEV-TKGYDYYGRTPNMAARTESVANGGQ  175 (235)
T ss_dssp             HHHHHCCSCCEEEEEEEECCEEEECTT-SSSEEEESHHHHHHHHHHHTCCTTC
T ss_pred             cccccccCcEEEEEEEeeEEEEEeccc-ccceEEECHHHHHHHHHHhhcCCCE
Confidence                01469999999999999999998 5699999999999999999999884

>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*

Probab=99.96  E-value=3.6e-30  Score=223.06  Aligned_cols=129  Identities=23%  Similarity=0.259  Sum_probs=115.7

Q ss_pred             CccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccc
Q psy6828         213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGN  292 (392)
Q Consensus       213 ~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~  292 (392)
                      .......++++++|+||+|||.+++.++|+++.++||++|+.+++++.+|+|+++|++||++||+||.|           
T Consensus         9 ~~~~~~~~~~tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~v~k~~GD~~ma~f~~p-----------   77 (184)
T 1ybt_A            9 HHGSAERMLATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSP-----------   77 (184)
T ss_dssp             ----CEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSSEEEEESCH-----------
T ss_pred             CCCCCceEEEEEEEEECcCcHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeEeCCEEEEEeCCH-----------
Confidence            344566788999999999999999999999999999999999999999999999999999998888654           


Q ss_pred             ccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeee
Q psy6828         293 YDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCL  372 (392)
Q Consensus       293 ~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~  372 (392)
                                                  .+|++||++|++.+.+++        +++|||||+|+|++|++|..   ||+
T Consensus        78 ----------------------------~~A~~~Al~~~~~l~~~~--------l~~riGi~~G~v~~g~ig~~---~~~  118 (184)
T 1ybt_A           78 ----------------------------SAAIACADDIVDAVAALG--------IEVRIGIHAGEVEVRDASHG---TDV  118 (184)
T ss_dssp             ----------------------------HHHHHHHHHHHHHHHTTT--------CCEEEEEEEEEEEEEECSSC---EEE
T ss_pred             ----------------------------HHHHHHHHHHHHHHHhcC--------CcEEEEEEEeEEEEEecCCC---ceE
Confidence                                        368999999999998753        99999999999999999874   999


Q ss_pred             ecchHHHHHhhhhcCCCCC
Q psy6828         373 FGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       373 ~G~~Vn~AsRle~~~~~g~  391 (392)
                      |||+||+|+|||++|+||.
T Consensus       119 ~G~~Vn~AaRl~~~a~~g~  137 (184)
T 1ybt_A          119 AGVAVHIGARVCALAGPSE  137 (184)
T ss_dssp             ESHHHHHHHHHHHHSCTTC
T ss_pred             ECcHHHHHHHHHhcCCCCE
Confidence            9999999999999999984

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*

Probab=99.96  E-value=3.8e-29  Score=239.91  Aligned_cols=149  Identities=28%  Similarity=0.356  Sum_probs=126.6

Q ss_pred             cccchhhhccCC-------HHHHHHhhcCCCc------------cccccCceEEEeecccchhhhhccCChhhHHHhHHH
Q psy6828         190 KCDEALLFEMLP-------RSVAEQLRRGTSV------------EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLND  250 (392)
Q Consensus       190 ~~~~~lL~~~lp-------~~v~~~l~~~~~~------------~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~  250 (392)
                      ++...+|.+++|       ..++++++.+...            ..+.+.+++++|+||+|||.+++.++|++++++||+
T Consensus       165 ~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~p~evv~lLn~  244 (407)
T 1y10_A          165 KGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGR  244 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCCHHHHHHHHHH
Confidence            456778889998       7787777654321            123578999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHH
Q psy6828         251 LYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDL  330 (392)
Q Consensus       251 ~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~  330 (392)
                      ||..++.++. |+|+++|++||+|||+||.|                                       .+|++||++|
T Consensus       245 ~~~~~~~i~~-~~g~~iKtiGDa~mavfg~p---------------------------------------~~a~~~Al~m  284 (407)
T 1y10_A          245 LAGLARDLTA-PPVWFIKTIGDAVMLVCPDP---------------------------------------APLLDTVLKL  284 (407)
T ss_dssp             HHHHHHHHCC-TTCEEEEEETTEEEEEESSH---------------------------------------HHHHHHHHHH
T ss_pred             HHHHHHHHHH-cCcEEEEEecceEEEEECCH---------------------------------------HHHHHHHHHH
Confidence            9998877765 89999999999998888765                                       1578999999


Q ss_pred             HHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         331 LEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      ++.+.+.      +.++++|||||+|+|++|+       ||+|||+||+|||||++++||.
T Consensus       285 ~~~l~~~------~~~l~iRIGIhtG~Vv~Gv-------ydv~GdtVN~AsRLes~a~~g~  332 (407)
T 1y10_A          285 VEVVDTD------NNFPRLRAGVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGA  332 (407)
T ss_dssp             HHHHHTC------TTSCCEEEEEEEEEEEEET-------TEEEEHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHh------CCCceEEEEEEEEEEEEec-------CccCCCHHHHHHHHHhcCCCCe
Confidence            9999873      2468999999999999984       8999999999999999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=1.3e-29  Score=240.09  Aligned_cols=115  Identities=17%  Similarity=0.267  Sum_probs=94.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      +.|...+.||+|+||+||+|+++.+|+.||||++++...  ...+.+.+|+.+                           
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            357777889999999999999999999999999986644  456778999998                           


Q ss_pred             --------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++. ++...+++.+++.|+.||+.||.|||+++| +||||||+|||++.+|.+||+|||+|+...
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI-LHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTC-EETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCCHHHEEECCCCCEEEcccccceeec
Confidence                    4443 233458999999999999999999999999 999999999999999999999999998754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=1.4e-29  Score=236.13  Aligned_cols=153  Identities=15%  Similarity=0.237  Sum_probs=115.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|+++.+|+.||||++++...   ...+.+.+|+.+                            
T Consensus        34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy  113 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY  113 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            5667789999999999999999999999999976533   345678899988                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD  167 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d  167 (392)
                             ++++.. ..+++.+++.|+.||+.||.|||+++| +||||||+|||++.++.+||+|||+|+...........
T Consensus       114 ~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~I-iHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~  191 (311)
T 4aw0_A          114 AKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA  191 (311)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence                   444333 269999999999999999999999999 99999999999999999999999999876433221111


Q ss_pred             ccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         168 QHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       168 ~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ....|++.|++||    .+++.+.|+|+.+.+++.++
T Consensus       192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml  228 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV  228 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHH
T ss_pred             cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence            1123555555444    33344455555555554444

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=3.1e-29  Score=230.44  Aligned_cols=114  Identities=25%  Similarity=0.367  Sum_probs=91.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||+||+|.+..+|+.||||++++...   ...+.+.+|+.+                           
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            35667789999999999999999999999999976543   335678899888                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                             +++.... .+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+....
T Consensus        94 y~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~I-iHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           94 YAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             CCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence                   4444333 69999999999999999999999999 9999999999999999999999999986543

>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}

Probab=99.95  E-value=3.8e-28  Score=211.63  Aligned_cols=127  Identities=20%  Similarity=0.263  Sum_probs=113.6

Q ss_pred             ccCceEEEeecccchhhhhccCChhhHHHhHHHHHHH-HHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccc
Q psy6828         218 SFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTC-FDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVY  296 (392)
Q Consensus       218 ~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~-~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~  296 (392)
                      +.++++++|+||++||.+++..+|+.+ ..|+++|.. +++++.+|+|+++|++||++||+||.                
T Consensus         4 e~r~vtvlf~Di~gft~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~~G~v~k~~GD~~~a~f~~----------------   66 (189)
T 3mr7_A            4 ERRLCAILAADMAGYSRLMERNETDVL-NRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDT----------------   66 (189)
T ss_dssp             EEEEEEEEEEEECCCCGGGCCCCHHHH-HHHHHHHHHTHHHHHHHTTCEEEEEETTEEEEEESS----------------
T ss_pred             cEEEEEEEEEEchhhHHHHhhCCHHHH-HHHHHHHHHHHHHHHHHcCCEEEEEeCCEEEEEeCC----------------
Confidence            457899999999999999999887665 788888887 99999999999999999999888753                


Q ss_pred             ceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecch
Q psy6828         297 KVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDT  376 (392)
Q Consensus       297 ~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~  376 (392)
                                             +.+|+.||++|++.+.+++.......++++|||||+|+|++|       +||+||++
T Consensus        67 -----------------------~~~A~~~Al~i~~~l~~~~~~~~~~~~l~~riGi~~G~v~~g-------~~~~~G~~  116 (189)
T 3mr7_A           67 -----------------------AQAALRCALEIQQAMQQREEDTPRKERIQYRIGINIGDIVLE-------DGDIFGDA  116 (189)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHTTTSCGGGCCCEEEEEEEEEEEEC-------SSCEESHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHHHHhhhcccCCceeEEEEEEEEEEEEE-------CCeEEChH
Confidence                                   468899999999999998866555568999999999999998       79999999


Q ss_pred             HHHHHhhhhcCCCCC
Q psy6828         377 VNTASRMESTGEDVV  391 (392)
Q Consensus       377 Vn~AsRle~~~~~g~  391 (392)
                      ||+|+|||+.++||.
T Consensus       117 Vn~AaRl~~~a~~~~  131 (189)
T 3mr7_A          117 VNVAARLEAISEPGA  131 (189)
T ss_dssp             HHHHHHHHHHSCTTC
T ss_pred             HHHHHHHHhhCCCCe
Confidence            999999999999984

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=4e-29  Score=236.42  Aligned_cols=152  Identities=15%  Similarity=0.169  Sum_probs=116.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||+||+|.++.+|+.||||+++.......+.+.+|+.+                             
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            446667789999999999999999999999999976655555668889888                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                            +++.+.  .+++.++..|+.||+.||.|||+++| +||||||+|||++.+|.+||+|||+|+..........  
T Consensus       154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~--  228 (346)
T 4fih_A          154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--  228 (346)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC--
T ss_pred             CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc--
Confidence                  444332  69999999999999999999999999 9999999999999999999999999987644322111  


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ...|++.|++||    .+++.+.|+|+.+.+++.++
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml  264 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV  264 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence            113555555444    33444555555555555544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.95  E-value=2.2e-28  Score=230.56  Aligned_cols=108  Identities=20%  Similarity=0.238  Sum_probs=90.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||+||+|+++.+|+.||||+++.....     .+|+.+                               
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            45566799999999999999999999999999765432     346666                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~  160 (392)
                          ++++.. ..+++.++..|+.||+.||.|||+++| +||||||+|||++.+| .+||+|||+|+....
T Consensus       135 g~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~I-iHRDlKp~NILl~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          135 GSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRI-LHGDVKADNVLLSSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             CBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTE-ECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-eecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence                333332 269999999999999999999999999 9999999999999988 599999999987643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=237.06  Aligned_cols=152  Identities=15%  Similarity=0.169  Sum_probs=117.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||+||+|.++.+|+.||||+++.......+.+.+|+.+                             
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            457777889999999999999999999999999987665556678889888                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ  168 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~  168 (392)
                            ++++..  .+++.++..|+.||+.||.|||+++| +||||||+|||++.+|.+||+|||+|+..........  
T Consensus       231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~I-iHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~--  305 (423)
T 4fie_A          231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK--  305 (423)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC--
T ss_pred             CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCe-ecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc--
Confidence                  444333  59999999999999999999999999 9999999999999999999999999987644322111  


Q ss_pred             cceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ...|++.|++||    ..+..+.|+|+.+.+++.|+
T Consensus       306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml  341 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV  341 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence            123555555444    33444555555555555544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.94  E-value=1e-27  Score=223.49  Aligned_cols=113  Identities=19%  Similarity=0.365  Sum_probs=94.4

Q ss_pred             eccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||+|+||+||+|.+.     .+++.||||+++.......+.|.+|+.+                           
T Consensus        16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E   95 (299)
T 4asz_A           16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE   95 (299)
T ss_dssp             EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            44567999999999999864     4678999999988777777889999999                           


Q ss_pred             --------HHhhcC------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 --------DIMENE------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 --------~~l~~~------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                              +++...            ...+++.++..|+.||+.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus        96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i-iHRDlKp~NILl~~~~~~Ki~DFGl  174 (299)
T 4asz_A           96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF-VHRDLATRNCLVGENLLVKIGDFGM  174 (299)
T ss_dssp             CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCSC
T ss_pred             cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCccCHhhEEECCCCcEEECCccc
Confidence                    344321            2369999999999999999999999999 9999999999999999999999999


Q ss_pred             chhccc
Q psy6828         155 TEFKRD  160 (392)
Q Consensus       155 a~~~~~  160 (392)
                      |+....
T Consensus       175 a~~~~~  180 (299)
T 4asz_A          175 SRDVYS  180 (299)
T ss_dssp             HHHHTG
T ss_pred             ceecCC
Confidence            986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1.9e-27  Score=220.27  Aligned_cols=148  Identities=16%  Similarity=0.220  Sum_probs=113.3

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      .....||+|+||+||+|.+..+++.||+|.+.+...  ...+.+.+|+.+                              
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            345569999999999999999999999999976543  445678999988                              


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcC-CceEEEeccccchhccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~~~  162 (392)
                               +++... ..+++..+..|+.||+.||.|||+++  | +||||||+|||++. ++.+||+|||+|+......
T Consensus       109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~I-iHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~  186 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCC-CCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCE-EecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence                     333222 26999999999999999999999998  8 99999999999974 7999999999998654322


Q ss_pred             cccccccceeeeeeeccC---CCCcccccccccchhhhccC
Q psy6828         163 YTGTDQHSFLQHTYHVNR---AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       163 ~~~~d~~s~g~~~~~~~~---~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ..    ...|++.|++||   ..++.+.|+|+.+.++..++
T Consensus       187 ~~----~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyell  223 (290)
T 3fpq_A          187 AK----AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMA  223 (290)
T ss_dssp             BE----ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHH
T ss_pred             cC----CcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHH
Confidence            11    124666666665   23445566666666666554

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.94  E-value=2.7e-27  Score=220.76  Aligned_cols=155  Identities=21%  Similarity=0.215  Sum_probs=111.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||+||+|+++.+|+.||||+++.... ...+.+.+|+.+                              
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~   86 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP   86 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred             CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence            3345679999999999999999999999999975443 345678899988                              


Q ss_pred             -----------------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 -----------------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 -----------------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                                       ++++...  ...++..+..++.||++||.|||++++ +||||||+|||++.++.+||+|||+|
T Consensus        87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~I-iHRDlKp~NILl~~~~~vKl~DFGla  165 (299)
T 4g31_A           87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLV  165 (299)
T ss_dssp             CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred             CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcC-ccccCcHHHeEECCCCcEEEccCccc
Confidence                             1121111  024556688999999999999999999 99999999999999999999999999


Q ss_pred             hhccccccccc----------cccceeeeeeeccC----CCCcccccccccchhhhccCC
Q psy6828         156 EFKRDAEYTGT----------DQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLP  201 (392)
Q Consensus       156 ~~~~~~~~~~~----------d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp  201 (392)
                      +.........+          .....|++.|++||    ..++.+.|+|+.+.++..++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~  225 (299)
T 4g31_A          166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY  225 (299)
T ss_dssp             --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred             eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence            98754332211          11235888888777    456677888999888888763

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=5.1e-27  Score=221.61  Aligned_cols=112  Identities=20%  Similarity=0.315  Sum_probs=91.4

Q ss_pred             eccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ...+.||+|+||+||+|+..     .+++.||||+++.......+.|.+|+.+                           
T Consensus        44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            44567999999999999854     4688999999988777778889999998                           


Q ss_pred             --------HHhhcC--------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 --------DIMENE--------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 --------~~l~~~--------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                              +++...              ...+++.++..|+.||+.||.|||++++ +||||||+|||++.++.+||+||
T Consensus       124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i-iHRDLKp~NILl~~~~~~Ki~DF  202 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF-VHRDLATRNCLVGQGLVVKIGDF  202 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEETTTEEEECCC
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCe-ecccccHhhEEECCCCcEEEccc
Confidence                    343321              1258999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhcc
Q psy6828         153 GLTEFKR  159 (392)
Q Consensus       153 Gla~~~~  159 (392)
                      |+|+...
T Consensus       203 Gla~~~~  209 (329)
T 4aoj_A          203 GMSRDIY  209 (329)
T ss_dssp             C------
T ss_pred             ccceecc
Confidence            9998653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=9.9e-28  Score=223.40  Aligned_cols=151  Identities=23%  Similarity=0.229  Sum_probs=103.3

Q ss_pred             eeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      |...+.||+|+||+||+|++.   .+++.||||++++...  .....+.+|+.+                          
T Consensus        26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm  105 (304)
T 3ubd_A           26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL  105 (304)
T ss_dssp             EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred             cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            666778999999999999874   3678999999976543  223457778776                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTG  165 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~  165 (392)
                               +++.+. ..+++.++..++.||+.||.|||++++ +||||||+|||++.+|.+||+|||+|+.........
T Consensus       106 Ey~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~~I-iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  183 (304)
T 3ubd_A          106 DFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  183 (304)
T ss_dssp             CCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC
T ss_pred             EcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-cCCCCCHHHeEEcCCCCEEecccccceeccCCCccc
Confidence                     333332 269999999999999999999999999 999999999999999999999999998653322111


Q ss_pred             ccccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         166 TDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       166 ~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      .  ...|++.|++||    .+++.+.|+|+.+.+++.++
T Consensus       184 ~--~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml  220 (304)
T 3ubd_A          184 Y--SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML  220 (304)
T ss_dssp             C--SCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred             c--ccccCcccCCHHHhccCCCCCCCcccchHHHHHHHH
Confidence            1  123455555444    33344445555555544443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.93  E-value=7.4e-27  Score=217.93  Aligned_cols=148  Identities=16%  Similarity=0.225  Sum_probs=106.0

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------------   94 (392)
                      .+.||+|+||+||+|...   ..||||+++...  ....+.|.+|+.+                                
T Consensus        41 ~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGs  117 (307)
T 3omv_A           41 STRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS  117 (307)
T ss_dssp             EEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCB
T ss_pred             eeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCC
Confidence            567999999999999743   469999997543  3556789999998                                


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccccccee
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFL  172 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s~g  172 (392)
                        +++......+++.++..|+.||+.||.|||+++| +||||||+|||+++++.+||+|||+|+...............|
T Consensus       118 L~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~I-iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~G  196 (307)
T 3omv_A          118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG  196 (307)
T ss_dssp             HHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC-BCSCCCSSSEEEETTEEEEECCCSSCBC------------CCC
T ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-cCCccCHHHEEECCCCcEEEeeccCceecccCCcceeeccccc
Confidence              5555555579999999999999999999999999 9999999999999999999999999986543221111111235


Q ss_pred             eeeeeccCC-------CCcccccccccchhhhccC
Q psy6828         173 QHTYHVNRA-------GSTESLHCKCDEALLFEML  200 (392)
Q Consensus       173 ~~~~~~~~~-------~~~~~~d~~~~~~lL~~~l  200 (392)
                      ++.|++||.       +++.+.|.|+.+.++.+++
T Consensus       197 T~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell  231 (307)
T 3omv_A          197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM  231 (307)
T ss_dssp             CTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH
Confidence            555554441       1333445555555554443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.93  E-value=1e-26  Score=225.00  Aligned_cols=114  Identities=25%  Similarity=0.362  Sum_probs=98.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||+||+|.++.+|+.||||++++...  ...+.+.+|+.+                           
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            457778899999999999999999999999999976543  445678889888                           


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                   +++.. ...+++.++..+++||+.||.|||+++| +||||||+|||++.++.+||+|||+|+...
T Consensus       134 ~~ivmE~~~g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~~~i-iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQV-IHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCSEEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCcC-cCCCcCccccccCCCCCEEEeecceeeecc
Confidence                         22222 2369999999999999999999999999 999999999999999999999999998653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.93  E-value=2.2e-26  Score=215.35  Aligned_cols=111  Identities=23%  Similarity=0.305  Sum_probs=91.0

Q ss_pred             cCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      .+.||+|+||+||+|...     .+++.||||+++.... ...+.|.+|+.+                            
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey  110 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY  110 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence            456999999999999853     4678999999975433 345779999988                            


Q ss_pred             -------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 -------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 -------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                             +++...               ...+++.++..|+.||+.||.|||++++ |||||||+|||+++++.+||+||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i-iHRDLK~~NILl~~~~~~Ki~DF  189 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV-VHKDLATRNVLVYDKLNVKISDL  189 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCS
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCC-CCCCccccceEECCCCCEEECCc
Confidence                   444321               1258999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhccc
Q psy6828         153 GLTEFKRD  160 (392)
Q Consensus       153 Gla~~~~~  160 (392)
                      |+|+....
T Consensus       190 Glar~~~~  197 (308)
T 4gt4_A          190 GLFREVYA  197 (308)
T ss_dssp             CCBCGGGG
T ss_pred             ccceeccC
Confidence            99986543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.92  E-value=4.2e-26  Score=213.35  Aligned_cols=109  Identities=22%  Similarity=0.260  Sum_probs=86.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||+||+|.+  +|+.||||+++....   +.+..|.++                               
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~---~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            45567899999999999974  699999999975432   233344443                               


Q ss_pred             -HHhhcCC-------cCCCHHHHHHHHHHHHHHHHHHhcC--------CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -DIMENED-------VKLDNMFIASLVADILRGMLYLHDS--------ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -~~l~~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~--------~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                       +|+.+++       ..+++..+..++.|++.||.|||++        ++ +||||||+|||++.++.+||+|||+|+..
T Consensus        80 ~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~I-iHRDlKp~NILl~~~~~~Ki~DFGla~~~  158 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCE-ECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             ecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCE-eeccCCcccEEECCCCCEEEEeCCCCccc
Confidence             2222221       1589999999999999999999987        78 99999999999999999999999999865


Q ss_pred             cc
Q psy6828         159 RD  160 (392)
Q Consensus       159 ~~  160 (392)
                      ..
T Consensus       159 ~~  160 (303)
T 3hmm_A          159 DS  160 (303)
T ss_dssp             ET
T ss_pred             cC
Confidence            43

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.92  E-value=1.2e-25  Score=213.95  Aligned_cols=114  Identities=23%  Similarity=0.268  Sum_probs=95.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      .+...+.||+|+||+||+|.+..+     ++.||||.++.... ...+.+.+|+.+                        
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~  144 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL  144 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence            456678899999999999987654     36899999976544 445678889887                        


Q ss_pred             -------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce
Q psy6828          95 -------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV  146 (392)
Q Consensus        95 -------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~  146 (392)
                                   ++++..               ...+++.++..|+.||++||.|||++++ |||||||+|||+++++.
T Consensus       145 ~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~i-iHRDLK~~NILl~~~~~  223 (353)
T 4ase_A          145 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEKNV  223 (353)
T ss_dssp             EEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGC
T ss_pred             EEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCe-ecCccCccceeeCCCCC
Confidence                         444321               1248999999999999999999999999 99999999999999999


Q ss_pred             EEEeccccchhcc
Q psy6828         147 VKLADFGLTEFKR  159 (392)
Q Consensus       147 ~kl~DFGla~~~~  159 (392)
                      +||+|||+|+...
T Consensus       224 vKi~DFGlar~~~  236 (353)
T 4ase_A          224 VKICDFGLARDIY  236 (353)
T ss_dssp             EEECCCGGGSCTT
T ss_pred             EEECcchhhhhcc
Confidence            9999999998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.92  E-value=6.8e-26  Score=229.59  Aligned_cols=114  Identities=18%  Similarity=0.197  Sum_probs=92.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHH---HHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKE---LKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E---~~~------------------------   94 (392)
                      -|...+.||+|+||+||+|+++.+|+.||||++++...   .......+|   +.+                        
T Consensus       190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl  269 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF  269 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEE
Confidence            36667889999999999999999999999999975432   112233333   322                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                 +++... ..+++..++.|+.||+.||.|||+++| +||||||+|||++.+|.+||+|||+|+....
T Consensus       270 VmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~gI-iHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          270 ILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCchHHeEEeCCCCEEecccceeeecCC
Confidence                       222222 269999999999999999999999999 9999999999999999999999999986543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=1.3e-25  Score=227.50  Aligned_cols=133  Identities=19%  Similarity=0.210  Sum_probs=112.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||+||+|.++.+|+.||||++.+......+.+.+|+.+                             
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            456777889999999999999999999999999988777677788899887                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC--ceEEEeccccchhccccccc--
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLADFGLTEFKRDAEYT--  164 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~--~~~kl~DFGla~~~~~~~~~--  164 (392)
                            +++......+++.++..+++||+.||.|||++++ +||||||+|||++.+  +.+||+|||+|+........  
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i-iHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~  315 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV  315 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCChhhccccCCCCCCEEEeeccceeEccCCCceee
Confidence                  4444444579999999999999999999999999 999999999999864  88999999999876433211  


Q ss_pred             --------------------cccccceeeeeee
Q psy6828         165 --------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 --------------------~~d~~s~g~~~~~  177 (392)
                                          ..|+||+|+++|+
T Consensus       316 ~~GT~~y~APEv~~~~~y~~~~DiWSlGvilye  348 (573)
T 3uto_A          316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYI  348 (573)
T ss_dssp             ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHH
T ss_pred             eEECccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence                                2288899988888

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=1.5e-25  Score=214.39  Aligned_cols=115  Identities=20%  Similarity=0.263  Sum_probs=93.2

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSVDITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------   94 (392)
                      ....|...+.||+|+||+||+|+++   .+++.||||.+.+...  ..++.+|+.+                        
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            3455777788999999999999876   3578999999876543  3456677766                        


Q ss_pred             ---HHhhcCCc-----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhcc
Q psy6828          95 ---DIMENEDV-----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---~~l~~~~~-----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~  159 (392)
                         +|+..+++     .+++.+++.+++|++.||.|||++|| +||||||+|||++.+ +.+||+|||+|+...
T Consensus        97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gI-iHRDiKPeNiLl~~~~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGI-VHRDVKPSNFLYNRRLKKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred             EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence               22222211     59999999999999999999999999 999999999999877 899999999997543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.89  E-value=6.6e-23  Score=192.00  Aligned_cols=113  Identities=25%  Similarity=0.362  Sum_probs=100.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+........+.+.+|+.+                              
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   90 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK   90 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence            35567789999999999999999999999999987777777889999988                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           ++++.....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           91 GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCCcCeEEECCCCCEEEeecccceec
Confidence                 5555545579999999999999999999999999 99999999999999999999999999754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.89  E-value=1.9e-23  Score=197.70  Aligned_cols=133  Identities=23%  Similarity=0.246  Sum_probs=109.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      -..|...+.||+|+||.||+|.+..+|+.||||++.+...  ...+.+.+|+.+                          
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            3446677889999999999999999999999999976533  455678888887                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus        94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  171 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD  171 (328)
T ss_dssp             CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGG
T ss_pred             ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-eccCCCHHHEEEcCCCCEEEeeccCceecCCCCccc
Confidence                     222222 269999999999999999999999999 9999999999999999999999999975432211  


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ...|+||+|+++|+
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  206 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT  206 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHH
Confidence                                 12488888888888

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.87  E-value=4e-23  Score=197.37  Aligned_cols=131  Identities=20%  Similarity=0.219  Sum_probs=104.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||+||++.+..+|+.||||++++...   ...+.+.+|..+                           
T Consensus        24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            35667789999999999999999999999999975422   233455566655                           


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++... ..+++.+++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......   
T Consensus       104 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gi-vHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  181 (353)
T 3txo_A          104 EFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT  181 (353)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred             eCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCCHHHEEECCCCCEEEccccceeecccCCccc
Confidence                     222222 269999999999999999999999999 999999999999999999999999987532111   


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  216 (353)
T 3txo_A          182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE  216 (353)
T ss_dssp             ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred             cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHH
Confidence                                112399999999998

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.87  E-value=1e-22  Score=189.23  Aligned_cols=134  Identities=22%  Similarity=0.331  Sum_probs=109.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------   94 (392)
                      .+.|...+.||+|+||.||++.    +..+++.||||++........+.+.+|+.+                        
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            3456667789999999999998    567899999999987776777788899887                        


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                   +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence                         4444444459999999999999999999999999 99999999999999999999999999764322


Q ss_pred             c--------------------------cccccccceeeeeee
Q psy6828         162 E--------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~--------------------------~~~~d~~s~g~~~~~  177 (392)
                      .                          ....|+||+|+++|+
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  209 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  209 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHH
Confidence            1                          112389999999988

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.87  E-value=6.7e-23  Score=190.29  Aligned_cols=112  Identities=21%  Similarity=0.340  Sum_probs=96.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||+||+|.+..+++.||+|++.....  ...+.+.+|+.+                             
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            5556789999999999999999999999999975433  345677888887                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i-vH~dikp~Nil~~~~~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A           84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccceec
Confidence                 3333444579999999999999999999999999 99999999999999999999999999754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.87  E-value=8e-23  Score=199.46  Aligned_cols=131  Identities=16%  Similarity=0.095  Sum_probs=100.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      +...+.||+|+||+||+|.+..+|+.||||++.....   ...+.+.+|+.+                            
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  159 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  159 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence            4557789999999999999999999999999974322   123445555543                            


Q ss_pred             ---------------------------------HHh------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCC
Q psy6828          95 ---------------------------------DIM------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLK  135 (392)
Q Consensus        95 ---------------------------------~~l------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlK  135 (392)
                                                       +++      ......+++..+..++.|++.||.|||++++ +|||||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-iHrDiK  238 (413)
T 3dzo_A          160 PQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL-VHTYLR  238 (413)
T ss_dssp             CC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE-ECSCCC
T ss_pred             CCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcc
Confidence                                             001      0112236677888899999999999999999 999999


Q ss_pred             CCceEEcCCceEEEeccccchhccccc-----------------------------cccccccceeeeeee
Q psy6828         136 ASNCLVDSRWVVKLADFGLTEFKRDAE-----------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       136 p~NIll~~~~~~kl~DFGla~~~~~~~-----------------------------~~~~d~~s~g~~~~~  177 (392)
                      |+|||++.++.+||+|||+++......                             ....|+||||+++|+
T Consensus       239 p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e  309 (413)
T 3dzo_A          239 PVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW  309 (413)
T ss_dssp             GGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred             cceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence            999999999999999999986432210                             114599999999999

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.87  E-value=3.2e-22  Score=188.89  Aligned_cols=134  Identities=24%  Similarity=0.256  Sum_probs=109.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC-hhHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS-VDITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~E~~~------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++   .||||.++... ....+.+.+|+.+                        
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            3456667889999999999999886554   59999997653 3455678889887                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                 +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  206 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD  206 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-eCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence                       5555555579999999999999999999999999 999999999999999999999999998643221 


Q ss_pred             -------------------------cccccccceeeeeee
Q psy6828         163 -------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------------~~~~d~~s~g~~~~~  177 (392)
                                               ....|+||+|+++|+
T Consensus       207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  246 (325)
T 3kul_A          207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE  246 (325)
T ss_dssp             CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHH
Confidence                                     012389999999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.87  E-value=1.4e-22  Score=195.26  Aligned_cols=134  Identities=15%  Similarity=0.098  Sum_probs=103.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC---ChhHHHHHHHHHHH-------------HHhh--------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK---SVDITRAMKKELKI-------------DIME--------   98 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~~E~~~-------------~~l~--------   98 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||||++.+.   .....+.+.+|+.+             .++.        
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            35677788999999999999999999999999999743   23456778888843             1110        


Q ss_pred             -------------------------------cCCc--------CCC-------HHHHHHHHHHHHHHHHHHhcCCccccc
Q psy6828          99 -------------------------------NEDV--------KLD-------NMFIASLVADILRGMLYLHDSALRYHG  132 (392)
Q Consensus        99 -------------------------------~~~~--------~l~-------~~~~~~i~~qi~~~l~ylH~~~iiiHr  132 (392)
                                                     .+++        .++       +..+..++.|++.||.|||++++ +||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL-VHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE-ECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCe-ecC
Confidence                                           0000        123       36777899999999999999999 999


Q ss_pred             CCCCCceEEcCCceEEEeccccchhcccc------------------------------ccccccccceeeeeee
Q psy6828         133 NLKASNCLVDSRWVVKLADFGLTEFKRDA------------------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       133 DlKp~NIll~~~~~~kl~DFGla~~~~~~------------------------------~~~~~d~~s~g~~~~~  177 (392)
                      ||||+|||++.++.+||+|||+++.....                              .....|+||||+++|+
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e  305 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW  305 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence            99999999999999999999999753321                              1223489999999888

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.87  E-value=7.4e-23  Score=194.21  Aligned_cols=131  Identities=20%  Similarity=0.260  Sum_probs=106.8

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.||||++.+...   ...+.+.+|+.+                           
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            46667789999999999999999999999999965422   123467788877                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.......     
T Consensus        90 ~~~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~  167 (336)
T 3h4j_B           90 YAGGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHKI-VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS  167 (336)
T ss_dssp             CCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCC
T ss_pred             CCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCchhhEEEcCCCCEEEEEeccceeccCCcccccc
Confidence                   333222 269999999999999999999999999 999999999999999999999999997643321     


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~  200 (336)
T 3h4j_B          168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV  200 (336)
T ss_dssp             TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHH
T ss_pred             cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHH
Confidence                              112499999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.87  E-value=6.9e-23  Score=200.95  Aligned_cols=114  Identities=17%  Similarity=0.166  Sum_probs=94.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||+||++.+..+++.||+|++++....   ..+.+.+|..+                          
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~  153 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM  153 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence            3466678899999999999999999999999999653221   11225556555                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++......+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gi-iHrDLKp~NILl~~~g~vkL~DFGla~~~  225 (437)
T 4aw2_A          154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-VHRDIKPDNILMDMNGHIRLADFGSCLKL  225 (437)
T ss_dssp             CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence                     4444444579999999999999999999999999 99999999999999999999999998653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.87  E-value=1.5e-22  Score=195.11  Aligned_cols=132  Identities=23%  Similarity=0.334  Sum_probs=107.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------------   94 (392)
                      .+...+.||+|+||.||+|.+..+++.||||.++.... ...+.+.+|+.+                             
T Consensus       115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  194 (377)
T 3cbl_A          115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV  194 (377)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcC
Confidence            35557789999999999999888999999999975532 344567788877                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                            +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......      
T Consensus       195 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~  273 (377)
T 3cbl_A          195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC-IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG  273 (377)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSS
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-CCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCC
Confidence                  4444333469999999999999999999999999 999999999999999999999999987532211      


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||||+++|+
T Consensus       274 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~e  307 (377)
T 3cbl_A          274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE  307 (377)
T ss_dssp             CCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             CCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHH
Confidence                               012399999999998

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.87  E-value=2.9e-23  Score=197.72  Aligned_cols=130  Identities=23%  Similarity=0.260  Sum_probs=103.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||+|.++.+|+.||||++++...   ...+.+..|..+                            
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E   98 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   98 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            4556779999999999999999999999999975422   223445555544                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......    
T Consensus        99 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~  176 (345)
T 1xjd_A           99 YLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN  176 (345)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence                    222221 268999999999999999999999999 999999999999999999999999987532110    


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||+|+++|+
T Consensus       177 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  210 (345)
T 1xjd_A          177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE  210 (345)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             CCCCCcccCChhhhcCCCCCChhhhHHHHHHHHH
Confidence                               112399999999999

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.87  E-value=2.2e-22  Score=189.67  Aligned_cols=129  Identities=22%  Similarity=0.244  Sum_probs=107.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||+|.+..+|+.||||++........+.+.+|+.+                               
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            3445579999999999999988999999999987665566778888887                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                          +++..  ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......        
T Consensus       127 ~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  203 (321)
T 2c30_A          127 GALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG  203 (321)
T ss_dssp             CBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCS
T ss_pred             CCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccC
Confidence                33332  259999999999999999999999999 999999999999999999999999987543221        


Q ss_pred             ---------------cccccccceeeeeee
Q psy6828         163 ---------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------~~~~d~~s~g~~~~~  177 (392)
                                     ....|+||+|+++|+
T Consensus       204 t~~y~aPE~~~~~~~~~~~Dv~slG~il~e  233 (321)
T 2c30_A          204 TPYWMAPEVISRSLYATEVDIWSLGIMVIE  233 (321)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence                           112399999999998

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=9.5e-22  Score=182.66  Aligned_cols=131  Identities=24%  Similarity=0.321  Sum_probs=106.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.||+|+||.||+|.+..+++   .||+|.+..... ...+.+.+|+.+                           
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            3445779999999999999776655   799999976443 456778888877                           


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......   
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence                     4555545578999999999999999999999999 999999999999999999999999997542211   


Q ss_pred             ------------------------cccccccceeeeeee
Q psy6828         163 ------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------------~~~~d~~s~g~~~~~  177 (392)
                                              ....|+||+|+++|+
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  220 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWE  220 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHH
Confidence                                    112389999999988

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.87  E-value=1.4e-22  Score=188.50  Aligned_cols=116  Identities=20%  Similarity=0.228  Sum_probs=97.8

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~------------------------   94 (392)
                      ...+|...+.||+|+||.||++.+..+++.||+|.+....   ....+.+.+|+.+                        
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            3456777888999999999999999999999999985432   2455678888887                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                 +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        89 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMRI-VHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             EEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             EEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence                       333322 258999999999999999999999999 999999999999999999999999997643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.87  E-value=2.9e-22  Score=192.85  Aligned_cols=128  Identities=22%  Similarity=0.250  Sum_probs=102.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.||+|+||.||+|.+..+|+.||+|+++.......+.+.+|+.+                                  
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            5679999999999999999999999999988776677788999988                                  


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE--cCCceEEEeccccchhcccccc--------
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV--DSRWVVKLADFGLTEFKRDAEY--------  163 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll--~~~~~~kl~DFGla~~~~~~~~--------  163 (392)
                       +++......+++..+..++.|++.||.|||++++ +||||||+|||+  +.++.+||+|||+++.......        
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  252 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI-LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP  252 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCC
Confidence             3333344469999999999999999999999999 999999999999  5678999999999986533211        


Q ss_pred             --------------ccccccceeeeeee
Q psy6828         164 --------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 --------------~~~d~~s~g~~~~~  177 (392)
                                    ...|+||+|+++|+
T Consensus       253 ~y~aPE~~~~~~~~~~~DiwslG~il~e  280 (373)
T 2x4f_A          253 EFLAPEVVNYDFVSFPTDMWSVGVIAYM  280 (373)
T ss_dssp             TTCCHHHHTTCBCCHHHHHHHHHHHHHH
T ss_pred             cEeChhhccCCCCCcHHhHHHHHHHHHH
Confidence                          12388999988888

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.87  E-value=8.7e-23  Score=190.32  Aligned_cols=115  Identities=19%  Similarity=0.310  Sum_probs=98.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||.+........+.+.+|+.+                           
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            34556777889999999999999999999999999976555455677888876                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++...  .+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus        98 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             CCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc-eeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence                    333322  48999999999999999999999999 999999999999999999999999987543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.87  E-value=5.4e-22  Score=189.21  Aligned_cols=133  Identities=23%  Similarity=0.325  Sum_probs=109.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||||++.....   ...+.+.+|+.+                          
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            446667789999999999999999999999999975432   344567888877                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......    
T Consensus       134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g  212 (348)
T 1u5q_A          134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  212 (348)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence                    3333333469999999999999999999999999 999999999999999999999999987543211    


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~e  245 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  245 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHH
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHH
Confidence                              123499999999999

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.87  E-value=7.6e-23  Score=202.52  Aligned_cols=134  Identities=22%  Similarity=0.246  Sum_probs=106.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------H------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------D------------   95 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~------------   95 (392)
                      ...|...+.||+|+||+||+|.+..+++.||||++.+..  ....+.+.+|+.+             +            
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            455777889999999999999999999999999997652  3445677888877             0            


Q ss_pred             -------Hh-----hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828          96 -------IM-----ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        96 -------~l-----~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  163 (392)
                             ++     ......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......
T Consensus       141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  219 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  219 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCCC-----CCC
T ss_pred             eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc
Confidence                   00     0011148999999999999999999999999 9999999999999999999999999986543211


Q ss_pred             ----------------------ccccccceeeeeee
Q psy6828         164 ----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~  177 (392)
                                            ...|+||+|+++|+
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  255 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  255 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHH
Confidence                                  13389999999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.86  E-value=2.4e-22  Score=186.38  Aligned_cols=132  Identities=22%  Similarity=0.224  Sum_probs=102.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||.+......  +.+.+|..+                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            34566778899999999999999999999999987543321  123444443                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhcccccc-
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFKRDAEY-  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~~~~~~-  163 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+|||+   +.++.+||+|||+++....... 
T Consensus        86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-vH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~  164 (296)
T 4hgt_A           86 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence                   4555444579999999999999999999999999 999999999999   7889999999999976433211 


Q ss_pred             -----------------------------ccccccceeeeeee
Q psy6828         164 -----------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -----------------------------~~~d~~s~g~~~~~  177 (392)
                                                   ...|+||+|+++|+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  207 (296)
T 4hgt_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHH
Confidence                                         12399999999998

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=3.8e-22  Score=188.14  Aligned_cols=132  Identities=17%  Similarity=0.249  Sum_probs=109.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      +.|...+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+                             
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            34666778999999999999999999999999997553 344567788887                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC--CceEEEeccccchhccccc----
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS--RWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~~~~~~----  162 (392)
                            +++......+++.++..++.|++.||.|||++++ +||||||+|||++.  ++.+||+|||+++......    
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gi-vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  162 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL  162 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence                  4444444469999999999999999999999999 99999999999987  7899999999997653321    


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  195 (321)
T 1tki_A          163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHH
T ss_pred             ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHH
Confidence                              122399999999998

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.86  E-value=4.1e-22  Score=196.95  Aligned_cols=115  Identities=25%  Similarity=0.412  Sum_probs=89.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||+||+|.+..+++.||||++.+..  ....+.+.+|+.+                          
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            356788899999999999999999999999999997643  3455678888887                          


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                   +++.. ...+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       132 ~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~i-iHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          132 LYVVLEIADSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHSAGI-LHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             EEEEECCCSEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             EEEEEeccccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCc-CCCCCChhhEEECCCCCEeecccccchhcc
Confidence                         22222 2359999999999999999999999999 999999999999999999999999998654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.86  E-value=1.1e-22  Score=191.63  Aligned_cols=130  Identities=21%  Similarity=0.298  Sum_probs=104.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||++.+..+|+.||+|++++...   ...+.+.+|..+                            
T Consensus         8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~   87 (318)
T 1fot_A            8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   87 (318)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence            4556779999999999999999999999999975432   234566677766                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY----  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~----  163 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......    
T Consensus        88 ~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g  165 (318)
T 1fot_A           88 IEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  165 (318)
T ss_dssp             CCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence                   333332 269999999999999999999999999 9999999999999999999999999976533211    


Q ss_pred             ----------------ccccccceeeeeee
Q psy6828         164 ----------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------~~~d~~s~g~~~~~  177 (392)
                                      ...|+||+|+++|+
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~e  195 (318)
T 1fot_A          166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYE  195 (318)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred             CccccCHhHhcCCCCCcccchhhhHHHHHH
Confidence                            12388888888887

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.86  E-value=1.2e-21  Score=188.40  Aligned_cols=133  Identities=20%  Similarity=0.293  Sum_probs=105.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEe-------ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGI-------YKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------   94 (392)
                      ..|...+.||+|+||.||+|.+.       .++..||||+++.... ...+.+.+|+.+                     
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            44566788999999999999875       2456799999976533 445678888877                     


Q ss_pred             ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                     +++...               ...+++.++..++.||+.||.|||++++ +||||||+|||++.+
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~  239 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-IHRDLAARNVLVTEN  239 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTT
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe-eccccchhhEEECCC
Confidence                           333322               1247899999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhcccccc-------------------------ccccccceeeeeee
Q psy6828         145 WVVKLADFGLTEFKRDAEY-------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       145 ~~~kl~DFGla~~~~~~~~-------------------------~~~d~~s~g~~~~~  177 (392)
                      +.+||+|||+++.......                         ...|+||||+++|+
T Consensus       240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~e  297 (370)
T 2psq_A          240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  297 (370)
T ss_dssp             CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHH
Confidence            9999999999975432110                         12389999999988

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=1.8e-22  Score=195.23  Aligned_cols=112  Identities=23%  Similarity=0.335  Sum_probs=86.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||++.+..  ....+.+.+|+.+                           
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            45667788999999999999999999999999996543  2445566677766                           


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++..  ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+..
T Consensus        89 v~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           89 VFDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSGGL-LHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EEECCSEEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EecccCcCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence                      22222  258999999999999999999999999 99999999999999999999999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.86  E-value=2.4e-22  Score=186.23  Aligned_cols=130  Identities=23%  Similarity=0.308  Sum_probs=105.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||.||+|.+ .+|+.||+|++.....  ...+.+.+|+.+                             
T Consensus         4 y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             chhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence            55567799999999999997 6799999999976543  223567788877                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                           +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......       
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (288)
T 1ob3_A           83 DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (288)
T ss_dssp             SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence                 4444444579999999999999999999999999 999999999999999999999999987543110       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (288)
T 1ob3_A          162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE  193 (288)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             ccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence                             112388888888888

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.86  E-value=3.2e-22  Score=187.71  Aligned_cols=115  Identities=25%  Similarity=0.400  Sum_probs=95.2

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------   94 (392)
                      ..+.|...+.||+|+||+||+|.+. +|+.||+|++.....  ...+.+.+|+.+                         
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            3456777888999999999999974 599999999975433  334667788877                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        98 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           98 FEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI-LHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             EECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCchHhEEECCCCCEEEccCcCceec
Confidence                     4444444469999999999999999999999999 99999999999999999999999999754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.86  E-value=5.4e-22  Score=190.21  Aligned_cols=133  Identities=25%  Similarity=0.239  Sum_probs=108.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||+|++.....  ...+.+.+|+.+                          
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            3456777889999999999999999999999999976543  445678888887                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~  162 (392)
                               +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.+   +.+||+|||++.......
T Consensus       108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence                     222222 258999999999999999999999999 999999999999865   459999999997654321


Q ss_pred             ----------------------cccccccceeeeeee
Q psy6828         163 ----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------------~~~~d~~s~g~~~~~  177 (392)
                                            ....|+||+|+++|+
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  222 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI  222 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence                                  112399999999999

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.86  E-value=2.8e-22  Score=192.08  Aligned_cols=134  Identities=23%  Similarity=0.263  Sum_probs=109.6

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------HHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------ITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~---------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+|+.||+|.+++....      ..+.+.+|+.+                     
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            345567778899999999999999999999999999765432      34678888887                     


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----eEEEeccccch
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTE  156 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~  156 (392)
                                    +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.++    .+||+|||+++
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             EEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence                          344333 369999999999999999999999999 9999999999998876    79999999997


Q ss_pred             hcccccc----------------------ccccccceeeeeee
Q psy6828         157 FKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      .......                      ...|+||+|+++|+
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~  210 (361)
T 2yab_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  210 (361)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHH
Confidence            6543211                      12389999998888

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.86  E-value=5.1e-22  Score=191.98  Aligned_cols=134  Identities=20%  Similarity=0.221  Sum_probs=111.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||+|.+..........+.+|+.+                            
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            3456777889999999999999999999999999987766556678889888                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC--CceEEEeccccchhcccccc--
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS--RWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~~~~~~~--  163 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+|||++.  ++.+||+|||+++.......  
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi-vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  208 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  208 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence                   4444444469999999999999999999999999 99999999999974  47799999999986543211  


Q ss_pred             --------------------ccccccceeeeeee
Q psy6828         164 --------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 --------------------~~~d~~s~g~~~~~  177 (392)
                                          ...|+||+|+++|+
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  242 (387)
T 1kob_A          209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV  242 (387)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHH
T ss_pred             eeccCCCccCchhccCCCCCCcccEeeHhHHHHH
Confidence                                12399999999999

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.86  E-value=1.5e-22  Score=189.92  Aligned_cols=115  Identities=23%  Similarity=0.200  Sum_probs=92.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      +.|...+.||+|+||+||+|.+..+|+.||||++.....  ........|...                           
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            456667789999999999999999999999999865433  222333344332                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                              +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL-VHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence                    2223333369999999999999999999999999 999999999999999999999999987653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.86  E-value=1.9e-22  Score=192.19  Aligned_cols=110  Identities=24%  Similarity=0.243  Sum_probs=92.8

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||+|++++...   ...+.+.+|..+                            
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e   90 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE   90 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence            4556779999999999999999999999999976532   344556677665                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              +++... ..+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        91 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           91 YVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCHHHEEECCCCCEEEEecccccc
Confidence                    222222 259999999999999999999999999 9999999999999999999999999975

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.86  E-value=1.1e-21  Score=184.04  Aligned_cols=131  Identities=24%  Similarity=0.346  Sum_probs=100.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||++.+  +|+.||||++.....  ...+.+.+|+.+                           
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE  114 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred             hHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence            4456678899999999999964  689999999976653  445678888887                           


Q ss_pred             --------HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 --------DIMENEDV--KLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 --------~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                              +++.....  .+++..+..++.|++.||.|||+++  + +||||||+|||++.++.+||+|||+++......
T Consensus       115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~i-vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~  193 (309)
T 3p86_A          115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI-VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF  193 (309)
T ss_dssp             CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCC-CCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred             cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCE-ECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence                    33333221  3899999999999999999999999  8 999999999999999999999999987533221


Q ss_pred             -----------------------cccccccceeeeeee
Q psy6828         163 -----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------------~~~~d~~s~g~~~~~  177 (392)
                                             ....|+||+|+++|+
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  231 (309)
T 3p86_A          194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE  231 (309)
T ss_dssp             --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHH
Confidence                                   123488999998888

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=1.1e-22  Score=194.19  Aligned_cols=110  Identities=18%  Similarity=0.227  Sum_probs=92.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+++.||||++++...   ...+.+..|..+                            
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E  101 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  101 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence            4556789999999999999999999999999975432   234556667665                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              +++... ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus       102 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gi-vHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A          102 YVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-EeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence                    222222 269999999999999999999999999 9999999999999999999999999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.86  E-value=2.2e-21  Score=179.03  Aligned_cols=131  Identities=22%  Similarity=0.290  Sum_probs=103.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+. ++..||+|.+...... .+.+.+|+.+                             
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            44666788999999999999754 6778999999866543 3567788877                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                            +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......      
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  180 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG  180 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc-cCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence                  4444434479999999999999999999999999 999999999999999999999999997542211      


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~  213 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE  213 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHH
Confidence                              112389999999988

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.86  E-value=1.8e-21  Score=180.93  Aligned_cols=134  Identities=22%  Similarity=0.286  Sum_probs=106.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecC---cEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKG---RIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..++   ..||+|.+..... ...+.+.+|+.+                        
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            345666778999999999999865433   3689999976433 455678888877                        


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                                  +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......
T Consensus       104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCchheEEECCCCCEEECcccccccccccc
Confidence                        4555555568999999999999999999999999 999999999999999999999999997542211


Q ss_pred             ---------------------------cccccccceeeeeee
Q psy6828         163 ---------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------------~~~~d~~s~g~~~~~  177 (392)
                                                 ....|+||+|+++|+
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  224 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  224 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHH
Confidence                                       112389999999988

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.86  E-value=1e-22  Score=193.15  Aligned_cols=134  Identities=19%  Similarity=0.290  Sum_probs=107.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------HHHHHHHHHHH-------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------ITRAMKKELKI-------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~-------------------   94 (392)
                      ..+.|...+.||+|+||.||++.+..+++.||||.+++....        ..+.+.+|+.+                   
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            455677788999999999999999999999999999765321        22345556665                   


Q ss_pred             -----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                       +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKDI-IHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-EEeccCHHHEEEcCCCcEEEeecccceE
Confidence                             223222 269999999999999999999999999 9999999999999999999999999976


Q ss_pred             cccccc-----------------------ccccccceeeeeee
Q psy6828         158 KRDAEY-----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~~-----------------------~~~d~~s~g~~~~~  177 (392)
                      ......                       ...|+||+|+++|+
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYT  222 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHH
Confidence            433211                       12388888888888

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.86  E-value=8.1e-22  Score=195.68  Aligned_cols=132  Identities=20%  Similarity=0.199  Sum_probs=105.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++......  +.+.+|..+                            
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            34577788999999999999999999999999987654321  124444444                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhcccccc-
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFKRDAEY-  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~~~~~~-  163 (392)
                             +++......+++.++..++.||+.||.|||++++ +||||||+|||+   +.++.+||+|||+++....... 
T Consensus        84 ~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI-vHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF-LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence                   4454444579999999999999999999999999 999999999999   5789999999999986543211 


Q ss_pred             -----------------------------ccccccceeeeeee
Q psy6828         164 -----------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -----------------------------~~~d~~s~g~~~~~  177 (392)
                                                   ...|+||||+++|+
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~e  205 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMY  205 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHH
Confidence                                         01299999999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.86  E-value=1.3e-21  Score=187.48  Aligned_cols=115  Identities=20%  Similarity=0.207  Sum_probs=89.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCChhHHH------H-----HHHHHHH------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSVDITR------A-----MKKELKI------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~------~-----~~~E~~~------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+     ++.||||.+.........      .     ...|...            
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            34677788999999999999988764     588999998766432111      1     1111111            


Q ss_pred             --------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCce
Q psy6828          95 --------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWV  146 (392)
Q Consensus        95 --------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~  146 (392)
                                                +++......+++.++..++.|++.||.|||++++ +||||||+|||++  .++.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-iHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEY-VHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEEESSCTTC
T ss_pred             EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-EEecCCHHHEEEecCCCCe
Confidence                                      3444444579999999999999999999999999 9999999999999  8899


Q ss_pred             EEEeccccchhc
Q psy6828         147 VKLADFGLTEFK  158 (392)
Q Consensus       147 ~kl~DFGla~~~  158 (392)
                      +||+|||+++..
T Consensus       193 ~kl~DFG~a~~~  204 (364)
T 3op5_A          193 VYLVDYGLAYRY  204 (364)
T ss_dssp             EEECCCTTCEES
T ss_pred             EEEEECCcceec
Confidence            999999999754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.86  E-value=5.8e-22  Score=194.94  Aligned_cols=133  Identities=20%  Similarity=0.200  Sum_probs=106.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.||+|+||+||+|.+..+|+.||+|.+.+...  ...+.+.+|+.+                          
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            4456677889999999999999999999999999987654  345668888887                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc---CCceEEEeccccchhccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD---SRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~---~~~~~kl~DFGla~~~~~~~  162 (392)
                               +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++   .++.+||+|||+++......
T Consensus        90 E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~gi-vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           90 DLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMGV-VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             EeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence                     222222 259999999999999999999999999 9999999999998   45789999999997654321


Q ss_pred             c-----------------------ccccccceeeeeee
Q psy6828         163 Y-----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~-----------------------~~~d~~s~g~~~~~  177 (392)
                      .                       ...|+||+|+++|+
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilye  205 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI  205 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHH
Confidence            1                       12399999999998

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.86  E-value=4.3e-22  Score=186.27  Aligned_cols=134  Identities=23%  Similarity=0.257  Sum_probs=101.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~-----------------------   94 (392)
                      ...|...+.||+|+||+||+|.+..+++.||||.+.....     .....+.+|+.+                       
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            3456777889999999999999999999999999863221     111223333332                       


Q ss_pred             -------------------HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 -------------------DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 -------------------~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                         +++.... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCI-VHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEcCCCCEEEeeCcc
Confidence                               2232222 238999999999999999999999999 9999999999999999999999999


Q ss_pred             chhcccccc----------------------ccccccceeeeeee
Q psy6828         155 TEFKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       155 a~~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      ++.......                      ...|+||+|+++|+
T Consensus       167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  211 (308)
T 3g33_A          167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE  211 (308)
T ss_dssp             TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHH
T ss_pred             ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHH
Confidence            976432211                      12388888888888

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=1.5e-22  Score=193.30  Aligned_cols=132  Identities=17%  Similarity=0.209  Sum_probs=106.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||||++++...   ...+.+.+|+.+                          
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            446667789999999999999999999999999965432   234567778877                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus       121 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~  198 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL  198 (350)
T ss_dssp             ECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence                     333322 258999999999999999999999999 9999999999999999999999999986543221  


Q ss_pred             ------------------ccccccceeeeeee
Q psy6828         164 ------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------------~~~d~~s~g~~~~~  177 (392)
                                        ...|+||+|+++|+
T Consensus       199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  230 (350)
T 1rdq_E          199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYE  230 (350)
T ss_dssp             EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             cCCccccCHHHhcCCCCCCcCCEecccHhHhH
Confidence                              12378888888877

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=1.3e-21  Score=180.46  Aligned_cols=134  Identities=19%  Similarity=0.228  Sum_probs=101.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+   +..||+|.+.... ....+.+.+|+.+                        
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            45566778899999999999997653   4579999987643 3455678888877                        


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--  162 (392)
                                +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......  
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY  172 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccccHHHEEECCCCCEEECccccccccCccccc
Confidence                      4454444469999999999999999999999999 999999999999999999999999997643221  


Q ss_pred             ----------------------cccccccceeeeeee
Q psy6828         163 ----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------------~~~~d~~s~g~~~~~  177 (392)
                                            ....|+||+|+++|+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  209 (281)
T 1mp8_A          173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  209 (281)
T ss_dssp             ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             ccccCCCcccccChhhcccCCCCCccCchHHHHHHHH
Confidence                                  112399999999998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.86  E-value=3.2e-22  Score=188.18  Aligned_cols=116  Identities=23%  Similarity=0.302  Sum_probs=96.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.+                          
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            45677888899999999999999999999999999975432 335667778776                          


Q ss_pred             -----------HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchh
Q psy6828          95 -----------DIMENEDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~  157 (392)
                                 ++++....  .+++.++..++.|++.||.|||++++ +||||||+|||+    +.++.+||+|||+++.
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI-VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence                       23322211  28999999999999999999999999 999999999999    7788899999999975


Q ss_pred             c
Q psy6828         158 K  158 (392)
Q Consensus       158 ~  158 (392)
                      .
T Consensus       166 ~  166 (319)
T 4euu_A          166 L  166 (319)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.86  E-value=4.5e-22  Score=190.85  Aligned_cols=112  Identities=13%  Similarity=0.175  Sum_probs=88.9

Q ss_pred             ceeeeccCCCCCcceeEEEEE-----EEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTP-----IGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~-----~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------   94 (392)
                      ...|...+.||+|+||.||+|     .+..+++.||||+++.....   .+..|..+                       
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHH---HHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChh---HHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            455677788999999999999     46778999999999876543   23334333                       


Q ss_pred             ---------------HHhhc----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-----------C
Q psy6828          95 ---------------DIMEN----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-----------R  144 (392)
Q Consensus        95 ---------------~~l~~----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-----------~  144 (392)
                                     +++..    ....+++..+..++.|++.||.|||++++ +||||||+|||++.           +
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~i-vHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEI-IHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCSGGGEEECGGGTCC------C
T ss_pred             CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe-ecCCCCHHHEEecccccCcccccccc
Confidence                           33331    23469999999999999999999999999 99999999999988           8


Q ss_pred             ceEEEeccccchhc
Q psy6828         145 WVVKLADFGLTEFK  158 (392)
Q Consensus       145 ~~~kl~DFGla~~~  158 (392)
                      +.+||+|||+|+..
T Consensus       220 ~~~kl~DFG~a~~~  233 (365)
T 3e7e_A          220 AGLALIDLGQSIDM  233 (365)
T ss_dssp             TTEEECCCTTCEEG
T ss_pred             CCEEEeeCchhhhh
Confidence            99999999999654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.86  E-value=4.7e-22  Score=186.38  Aligned_cols=134  Identities=18%  Similarity=0.188  Sum_probs=106.5

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------   94 (392)
                      ....|...+.||+|+||.||++.+..+++.||||+++....   ...+.+.+|+.+                        
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            45567778889999999999999999999999999976533   345577888876                        


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             ccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence                           222222 258999999999999999999999999 999999999999999999999999997543


Q ss_pred             ccc--------------------------cccccccceeeeeee
Q psy6828         160 DAE--------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~--------------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                          ....|+||+|+++|+
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~  211 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE  211 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHH
Confidence            211                          112388999988888

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.86  E-value=8.9e-22  Score=186.03  Aligned_cols=132  Identities=22%  Similarity=0.334  Sum_probs=102.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcE----EEEEEcCCCC-hhHHHHHHHHHHH-------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRI----FAIKRIPKKS-VDITRAMKKELKI-------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~~-~~~~~~~~~E~~~-------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.    ||+|.+.... ....+.+.+|+.+                         
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~   95 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT   95 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEE
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEE
Confidence            355667899999999999998888875    5777775432 2445678888887                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......   
T Consensus        96 ~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~  174 (327)
T 3lzb_A           96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  174 (327)
T ss_dssp             CCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCC-cCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence                     4555445579999999999999999999999999 999999999999999999999999997643211   


Q ss_pred             ----------------------cccccccceeeeeee
Q psy6828         163 ----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------------~~~~d~~s~g~~~~~  177 (392)
                                            ....|+||+|+++|+
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  211 (327)
T 3lzb_A          175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHH
Confidence                                  112389999999988

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.86  E-value=9.3e-22  Score=189.35  Aligned_cols=133  Identities=22%  Similarity=0.260  Sum_probs=102.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKS-VDITRAMKKELKI-------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+.   .++..||||.++... ....+.+.+|+.+                         
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            34556778999999999999876   457789999997653 3455678889887                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--  162 (392)
                                +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......  
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence                      5555555579999999999999999999999999 999999999999999999999999998653221  


Q ss_pred             ------------------------cccccccceeeeeee
Q psy6828         163 ------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------------~~~~d~~s~g~~~~~  177 (392)
                                              ....|+||||+++|+
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~e  242 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE  242 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHH
Confidence                                    012389999999988

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.86  E-value=3.4e-22  Score=188.92  Aligned_cols=112  Identities=18%  Similarity=0.215  Sum_probs=91.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||||.+......  +.+.+|+.+                             
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS--CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            3456677899999999999999999999999998654321  234445444                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce-----EEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV-----VKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~-----~kl~DFGla~~~  158 (392)
                            +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.     +||+|||+++..
T Consensus        87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           87 LGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL-IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence                  4444444579999999999999999999999999 99999999999999887     999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.86  E-value=5.8e-22  Score=187.23  Aligned_cols=134  Identities=22%  Similarity=0.256  Sum_probs=108.8

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------HHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------ITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~---------------------   94 (392)
                      ....|...+.||+|+||.||++.+..+|+.||+|.+.+....      ..+.+.+|+.+                     
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            345577778899999999999999999999999999754321      35678888877                     


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----eEEEeccccch
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTE  156 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~  156 (392)
                                    +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++    .+||+|||+++
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQI-AHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCe-EcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence                          344332 369999999999999999999999999 9999999999998887    79999999997


Q ss_pred             hcccccc----------------------ccccccceeeeeee
Q psy6828         157 FKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      .......                      ...|+||+|+++|+
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  209 (326)
T 2y0a_A          167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  209 (326)
T ss_dssp             ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHH
Confidence            6532111                      12388888888888

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=5.6e-22  Score=190.48  Aligned_cols=132  Identities=24%  Similarity=0.313  Sum_probs=102.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||||++.....  ...+.+.+|+.+                          
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            4557778889999999999999999999999999965432  345677888877                          


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                    ++++.  ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++....
T Consensus       104 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          104 DFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             CCEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence                          12222  258999999999999999999999999 9999999999999999999999999975432


Q ss_pred             cc---------------------cccccccceeeeeee
Q psy6828         161 AE---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~~---------------------~~~~d~~s~g~~~~~  177 (392)
                      ..                     ....|+||+|+++|+
T Consensus       181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  218 (367)
T 1cm8_A          181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  218 (367)
T ss_dssp             SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHH
Confidence            11                     123499999999998

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.86  E-value=4.2e-22  Score=187.35  Aligned_cols=133  Identities=20%  Similarity=0.255  Sum_probs=94.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+                            
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            456677889999999999999999999999999975432 233567788877                            


Q ss_pred             ------HHhhcC-----CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 ------DIMENE-----DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 ------~~l~~~-----~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                            +++...     ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  163 (317)
T 2pmi_A           85 MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI-LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN  163 (317)
T ss_dssp             CCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred             cCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence                  222211     1248999999999999999999999999 999999999999999999999999987543211 


Q ss_pred             -----------------------cccccccceeeeeee
Q psy6828         163 -----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------------~~~~d~~s~g~~~~~  177 (392)
                                             ....|+||+|+++|+
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  201 (317)
T 2pmi_A          164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE  201 (317)
T ss_dssp             CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHH
Confidence                                   112388888888888

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.86  E-value=9.3e-22  Score=182.57  Aligned_cols=132  Identities=22%  Similarity=0.223  Sum_probs=105.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++......  +.+.+|+.+                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            34566677899999999999999999999999998654321  234555554                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc---CCceEEEeccccchhcccccc-
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD---SRWVVKLADFGLTEFKRDAEY-  163 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~---~~~~~kl~DFGla~~~~~~~~-  163 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+|||++   .++.+||+|||+++....... 
T Consensus        86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           86 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             ecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence                   4454444579999999999999999999999999 9999999999994   788999999999976443211 


Q ss_pred             -----------------------------ccccccceeeeeee
Q psy6828         164 -----------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -----------------------------~~~d~~s~g~~~~~  177 (392)
                                                   ...|+||+|+++|+
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  207 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHH
Confidence                                         12399999999998

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=1.8e-21  Score=178.44  Aligned_cols=130  Identities=22%  Similarity=0.343  Sum_probs=106.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||++.+. +++.||+|++...... .+.+.+|+.+                              
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            3555678999999999999865 5788999999866543 3567888887                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                           +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......       
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  167 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  167 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe-ecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence                 4555555569999999999999999999999999 999999999999999999999999997543211       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  199 (269)
T 4hcu_A          168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  199 (269)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence                             112389999999988

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.85  E-value=2.3e-22  Score=193.45  Aligned_cols=112  Identities=20%  Similarity=0.196  Sum_probs=87.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||+||++.++.+++.||||++++...   ...+.+.+|..+                           
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~  118 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL  118 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEE
Confidence            35667789999999999999999999999999976543   223445555543                           


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++... ..+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       119 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gi-vHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          119 DYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCHHHEEECCCCCEEEeeCcccccc
Confidence                     222222 258999999999999999999999999 99999999999999999999999999863

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.85  E-value=4.7e-22  Score=188.79  Aligned_cols=111  Identities=18%  Similarity=0.219  Sum_probs=92.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      |...+.||+|+||+||++.+..+|+.||||++++...   ...+.+.+|..+                          ++
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~   86 (337)
T 1o6l_A            7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence            4456679999999999999999999999999975422   234567777776                          22


Q ss_pred             hhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          97 MENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        97 l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +..+        ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~g~vkL~DFG~a~~  154 (337)
T 1o6l_A           87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             CTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCcCCHHHEEECCCCCEEEeeccchhh
Confidence            2111        1258999999999999999999999999 9999999999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.85  E-value=3.4e-22  Score=184.96  Aligned_cols=133  Identities=17%  Similarity=0.216  Sum_probs=110.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecC-------cEEEEEEcCCCChhHHHHHHHHHHH----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKG-------RIFAIKRIPKKSVDITRAMKKELKI----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~vAiK~~~~~~~~~~~~~~~E~~~----------------------   94 (392)
                      +.|...+.||+|+||.||+|.+..++       ..||+|.+........+.+.+|+.+                      
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            34566778999999999999999887       4799999987666667788888887                      


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--------EEEeccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--------VKLADFG  153 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--------~kl~DFG  153 (392)
                                   +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.        +||+|||
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL-IHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe-ECCCcCcceEEEecCCcccccccceeeeccCc
Confidence                         4444444459999999999999999999999999 99999999999988876        9999999


Q ss_pred             cchhcccc--------------------ccccccccceeeeeee
Q psy6828         154 LTEFKRDA--------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       154 la~~~~~~--------------------~~~~~d~~s~g~~~~~  177 (392)
                      ++......                    .....|+||+|+++|+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred             ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHH
Confidence            98654221                    1223499999999998

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=3.9e-22  Score=197.63  Aligned_cols=132  Identities=23%  Similarity=0.312  Sum_probs=109.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||++++...   ...+.+.+|+.+                          
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            345667789999999999999999999999999975432   234578888887                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......   
T Consensus        96 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-vHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~  173 (476)
T 2y94_A           96 EYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR  173 (476)
T ss_dssp             ECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTTE-ECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-CcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence                     344332 369999999999999999999999999 999999999999999999999999997653321   


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  208 (476)
T 2y94_A          174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA  208 (476)
T ss_dssp             CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence                                112499999999999

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.85  E-value=2.5e-21  Score=182.24  Aligned_cols=134  Identities=18%  Similarity=0.204  Sum_probs=95.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC--hhHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS--VDITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------   94 (392)
                      .+.|...+.||+|+||.||+|.+..+++   .||||.++...  ....+.+.+|+.+                       
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            4456667889999999999999887765   89999997653  2456678888887                       


Q ss_pred             ------------------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828          95 ------------------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus        95 ------------------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                                        +++..     ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i-vH~Dikp~NIli~~~~~~kl~D  180 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF-IHRDLAARNCMLAEDMTVCVAD  180 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECC
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCc-ccCCCCcceEEEcCCCCEEEee
Confidence                              11110     01148999999999999999999999999 9999999999999999999999


Q ss_pred             cccchhccccc-------------------------cccccccceeeeeee
Q psy6828         152 FGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       152 FGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ||+++......                         ....|+||+|+++|+
T Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  231 (323)
T 3qup_A          181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE  231 (323)
T ss_dssp             CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHH
Confidence            99997543211                         112399999999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=2.4e-21  Score=186.43  Aligned_cols=132  Identities=21%  Similarity=0.297  Sum_probs=101.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecC---cEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKG---RIFAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      .+...+.||+|+||.||+|....++   ..||+|.++... ....+.+.+|+.+                          
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3445678999999999999977553   468999997543 3556778889887                          


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--  162 (392)
                                ++++.....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......  
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~  248 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  248 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCccchheEEECCCCCEEEeeccccccccccccc
Confidence                      5555555568999999999999999999999999 999999999999999999999999997542211  


Q ss_pred             -------------------------cccccccceeeeeee
Q psy6828         163 -------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------------~~~~d~~s~g~~~~~  177 (392)
                                               ....|+||||+++|+
T Consensus       249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  288 (373)
T 3c1x_A          249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  288 (373)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHH
Confidence                                     112399999999998

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.85  E-value=2.5e-21  Score=198.01  Aligned_cols=128  Identities=22%  Similarity=0.263  Sum_probs=104.8

Q ss_pred             cCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------   94 (392)
                      ...||+|+||.||+|....  ++..||||+++.... ...+.+.+|+.+                               
T Consensus       341 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g  420 (613)
T 2ozo_A          341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGG  420 (613)
T ss_dssp             EEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTC
T ss_pred             CcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCC
Confidence            3469999999999998764  456799999986532 456778899988                               


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------  162 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------  162 (392)
                         +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......         
T Consensus       421 ~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-iHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             BHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE-EcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence               4555555569999999999999999999999999 999999999999999999999999998653211         


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||||+++|+
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~e  531 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWE  531 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHH
Confidence                             012399999999998

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.85  E-value=8.1e-22  Score=193.47  Aligned_cols=116  Identities=21%  Similarity=0.375  Sum_probs=98.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||++.+..  ....+.+.+|+.+                         
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            3456777889999999999999999999999999997643  3455678888887                         


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                    +++... ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       104 ~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~gi-vHrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          104 ELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESGI-IHRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             CEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             eEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence                          222222 259999999999999999999999999 999999999999999999999999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.85  E-value=1.6e-21  Score=184.07  Aligned_cols=116  Identities=18%  Similarity=0.274  Sum_probs=97.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||||.+........+.+.+|+.+                            
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            3456778889999999999999999999999999976665556667777765                            


Q ss_pred             ---------------HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccc
Q psy6828          95 ---------------DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLT  155 (392)
Q Consensus        95 ---------------~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla  155 (392)
                                     +++..  ....+++.++..++.|++.||.|||+++  + +||||||+|||++.++.+||+|||++
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPI-IHRDLKVENLLLSNQGTIKLCDFGSA  185 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCC-BCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred             ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCE-EEccCCcccEEECCCCCEEEecCccc
Confidence                           22221  2235999999999999999999999999  8 99999999999999999999999999


Q ss_pred             hhcc
Q psy6828         156 EFKR  159 (392)
Q Consensus       156 ~~~~  159 (392)
                      +...
T Consensus       186 ~~~~  189 (337)
T 3ll6_A          186 TTIS  189 (337)
T ss_dssp             BCCS
T ss_pred             eecc
Confidence            7653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.85  E-value=1.4e-22  Score=197.33  Aligned_cols=113  Identities=18%  Similarity=0.195  Sum_probs=93.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||+||++.++.+++.||+|++++...   ...+.+.+|..+                          
T Consensus        69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~  148 (410)
T 3v8s_A           69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  148 (410)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            346667889999999999999999999999999965321   112235566655                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                               +++.+.  .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus       149 E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~gi-vHrDLKp~NILl~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          149 EYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             CCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeeECCCCCEEEeccceeEeec
Confidence                     333332  58999999999999999999999999 999999999999999999999999997643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.85  E-value=5.9e-22  Score=187.14  Aligned_cols=124  Identities=19%  Similarity=0.286  Sum_probs=99.3

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.||+|+||.||+|.+..+++.||||++.+..   ...+.+|+.+                                  
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            578999999999999999999999999996543   3445556555                                  


Q ss_pred             --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchhccccc-------
Q psy6828          95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~~~~~~-------  162 (392)
                        +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++   .+||+|||+++......       
T Consensus        93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  170 (325)
T 3kn6_A           93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGV-VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC  170 (325)
T ss_dssp             HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence              333332 269999999999999999999999999 9999999999998765   89999999997542211       


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~  201 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYT  201 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHH
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHH
Confidence                            112399999999999

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.85  E-value=1.1e-21  Score=187.57  Aligned_cols=141  Identities=26%  Similarity=0.309  Sum_probs=109.6

Q ss_pred             ccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------
Q psy6828          35 SWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------   94 (392)
Q Consensus        35 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------   94 (392)
                      .|.+.......|...+.||+|+||.||+|.+..+++.||||++.... ...+.+..|..+                    
T Consensus        26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~  104 (360)
T 3llt_A           26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGK  104 (360)
T ss_dssp             CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred             eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence            34444455677888899999999999999999999999999997532 333444455544                    


Q ss_pred             -------------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-----------
Q psy6828          95 -------------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-----------  143 (392)
Q Consensus        95 -------------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-----------  143 (392)
                                         +++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.           
T Consensus       105 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          105 FMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL-THTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             EEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             eeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCcccEEEccccccccccchh
Confidence                               333322 2248999999999999999999999999 99999999999975           


Q ss_pred             --------------CceEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828         144 --------------RWVVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       144 --------------~~~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                                    ++.+||+|||+++......                    ....|+||+|+++|+
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence                          7889999999997543211                    123489999999988

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.85  E-value=1.8e-21  Score=180.01  Aligned_cols=133  Identities=18%  Similarity=0.212  Sum_probs=106.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-------HHHHHHHHHHH----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-------ITRAMKKELKI----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-------~~~~~~~E~~~----------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||+|.+......       ..+.+.+|+.+                      
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l   98 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM   98 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence            4466677899999999999999999999999999754331       11567888877                      


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCce-----EEEeccccch
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWV-----VKLADFGLTE  156 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~-----~kl~DFGla~  156 (392)
                                 +++......+++..+..++.|++.||.|||+++  + +||||||+|||++.++.     +||+|||+++
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i-vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~  177 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ  177 (287)
T ss_dssp             EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC-BCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred             EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence                       344444447999999999999999999999999  8 99999999999988776     9999999987


Q ss_pred             hccccc----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                      ....|+||+|+++|+
T Consensus       178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~  220 (287)
T 4f0f_A          178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT  220 (287)
T ss_dssp             CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence            432211                      012388888888887

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.85  E-value=1e-21  Score=182.45  Aligned_cols=132  Identities=18%  Similarity=0.252  Sum_probs=104.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++......  +.+.+|+.+                            
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc--HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            34466677899999999999999999999999998654321  223344443                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce-----EEEeccccchhccccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV-----VKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~-----~kl~DFGla~~~~~~~  162 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.     +||+|||+++......
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~  165 (298)
T 1csn_A           87 LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL-VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  165 (298)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             ecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence                   4555444469999999999999999999999999 99999999999987766     9999999997653321


Q ss_pred             c------------------------------ccccccceeeeeee
Q psy6828         163 Y------------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~------------------------------~~~d~~s~g~~~~~  177 (392)
                      .                              ...|+||+|+++|+
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  210 (298)
T 1csn_A          166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY  210 (298)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence            1                              12389999999998

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=6.6e-21  Score=176.36  Aligned_cols=132  Identities=20%  Similarity=0.255  Sum_probs=106.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------   94 (392)
                      .++....||+|+||.||+|.+.  .+++.||+|.++... ....+.+.+|+.+                           
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~   90 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEM   90 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEEC
T ss_pred             hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEe
Confidence            3444558999999999999854  467889999998753 3456678888887                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......     
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  169 (287)
T 1u59_A           91 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA  169 (287)
T ss_dssp             CTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECC
T ss_pred             CCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCE-eeCCCchheEEEcCCCCEEECcccceeeeccCcceeec
Confidence                   5555455569999999999999999999999999 999999999999999999999999987543211     


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       170 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  205 (287)
T 1u59_A          170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE  205 (287)
T ss_dssp             CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             cccccccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence                                 112399999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.85  E-value=7.4e-22  Score=193.06  Aligned_cols=130  Identities=19%  Similarity=0.277  Sum_probs=100.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||+|.+..+|+.||||++.+....    ..+|+.+                            
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh----HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            34567788899999999999999999999999998654321    1234443                            


Q ss_pred             ------------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhc
Q psy6828          95 ------------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~  158 (392)
                                  +++.   .....+++..+..++.||+.||.|||++++ +||||||+|||++.+ +.+||+|||+++..
T Consensus       129 ~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence                        1111   123468999999999999999999999999 999999999999965 67899999999754


Q ss_pred             cccc-----------------------cccccccceeeeeee
Q psy6828         159 RDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      ....                       ....|+||+|+++|+
T Consensus       208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  249 (420)
T 1j1b_A          208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  249 (420)
T ss_dssp             CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHH
Confidence            2211                       112388888888888

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.85  E-value=6.7e-22  Score=189.91  Aligned_cols=132  Identities=23%  Similarity=0.345  Sum_probs=97.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||||++....  ....+.+.+|+.+                          
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            456777889999999999999999999999999997643  3445677788877                          


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                    +++..  ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++....
T Consensus       108 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          108 DVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             CCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECC---------
T ss_pred             eEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence                          11111  258999999999999999999999999 9999999999999999999999999975432


Q ss_pred             c---------------------ccccccccceeeeeee
Q psy6828         161 A---------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~---------------------~~~~~d~~s~g~~~~~  177 (392)
                      .                     .....|+||+|+++|+
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (367)
T 2fst_X          185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  222 (367)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHH
T ss_pred             cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHH
Confidence            1                     1123499999999998

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.85  E-value=4.7e-22  Score=192.60  Aligned_cols=112  Identities=21%  Similarity=0.240  Sum_probs=90.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||+||++.++.+++.||+|++++...   ...+.+.+|..+                           
T Consensus        53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~  132 (396)
T 4dc2_A           53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI  132 (396)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence            35567789999999999999999999999999976432   122334555544                           


Q ss_pred             HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +++..+        ...+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus       133 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          133 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-EeccCCHHHEEECCCCCEEEeecceeee
Confidence            222111        1269999999999999999999999999 9999999999999999999999999975

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.85  E-value=4.9e-21  Score=184.86  Aligned_cols=134  Identities=21%  Similarity=0.258  Sum_probs=105.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeec-------CcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYK-------GRIFAIKRIPKKSV-DITRAMKKELKI--------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+       +..||||++..... ...+.+.+|+.+                    
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            34566778899999999999997643       35799999976533 445677788777                    


Q ss_pred             ----------------HHhhcCC---------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 ----------------DIMENED---------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 ----------------~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                      +++....               ..+++.++..++.|++.||.|||++++ +||||||+|||++.
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~  226 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTE  226 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECT
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCcceEEEcC
Confidence                            3333221               248999999999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828         144 RWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       144 ~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ++.+||+|||+++......                         ....|+||+|+++|+
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e  285 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  285 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHH
Confidence            9999999999997543211                         012388888888887

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.85  E-value=4.6e-22  Score=185.22  Aligned_cols=114  Identities=21%  Similarity=0.292  Sum_probs=91.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------------------------HHHHHHHHHHH----
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------------------------ITRAMKKELKI----   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------------------------~~~~~~~E~~~----   94 (392)
                      .|...+.||+|+||.||+|.+..+++.||||++.+....                          ..+.+.+|+.+    
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            456677899999999999999999999999999765321                          13457788877    


Q ss_pred             ------------------------HHhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 ------------------------DIMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 ------------------------~~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                              +++..       ....+++.++..++.|++.||.|||++++ +||||||+|||++.
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKI-IHRDIKPSNLLVGE  172 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECT
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEECC
Confidence                                    22211       11258999999999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhcc
Q psy6828         144 RWVVKLADFGLTEFKR  159 (392)
Q Consensus       144 ~~~~kl~DFGla~~~~  159 (392)
                      ++.+||+|||+++...
T Consensus       173 ~~~~kl~Dfg~~~~~~  188 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFK  188 (298)
T ss_dssp             TSCEEECCCTTCEECS
T ss_pred             CCCEEEecCCCccccc
Confidence            9999999999997654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.85  E-value=5.2e-21  Score=176.88  Aligned_cols=133  Identities=20%  Similarity=0.320  Sum_probs=109.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+                            
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            344566778999999999999999999999999997654 345667788877                            


Q ss_pred             -------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc---
Q psy6828          95 -------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---  163 (392)
Q Consensus        95 -------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---  163 (392)
                             +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++........   
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTC-CCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCc-cCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence                   33332 23359999999999999999999999999 9999999999999999999999999986543221   


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ...|+||+|+++|+
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  204 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  204 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHH
Confidence                                 12389999999988

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.85  E-value=3.6e-21  Score=180.35  Aligned_cols=134  Identities=16%  Similarity=0.220  Sum_probs=100.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------   94 (392)
                      ...|...+.||+|+||.||+|....   +++.||+|.++...  ....+.+.+|+.+                       
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            3556677889999999999998775   45689999997553  2445667788776                       


Q ss_pred             -----------------HHhh-----cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 -----------------DIME-----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 -----------------~~l~-----~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                                       +++.     .....+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+||
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dikp~NIli~~~~~~kl~Df  191 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF-LHRDLAARNCMLRDDMTVCVADF  191 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTC-CCCCCSGGGEEECTTSCEEECSC
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCcceEEEcCCCcEEEeec
Confidence                             2221     122358999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhccccc-------------------------cccccccceeeeeee
Q psy6828         153 GLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       153 Gla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      |+++......                         ....|+||+|+++|+
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  241 (313)
T 3brb_A          192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE  241 (313)
T ss_dssp             SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred             CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHH
Confidence            9987543211                         112399999999998

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.85  E-value=4.7e-21  Score=176.73  Aligned_cols=133  Identities=21%  Similarity=0.271  Sum_probs=105.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI-------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+...   +..||+|.+.+.. ....+.+.+|+.+                         
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~   91 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEE
Confidence            4466677899999999999986643   3469999998653 3456678888877                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......   
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence                     4444333459999999999999999999999999 999999999999999999999999987543211   


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  206 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWE  206 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHH
Confidence                                 112389999999988

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=5.2e-22  Score=189.04  Aligned_cols=114  Identities=27%  Similarity=0.394  Sum_probs=91.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-----HHHHHHHHHHH------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-----ITRAMKKELKI------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||.+......     ..+.+.+|+.+                        
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            4466677899999999999999999999999999754321     12356677776                        


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        90 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           90 VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             EEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             EEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCE-ECCCCCHHHEEEcCCCCEEEEecccceec
Confidence                      4444444568999999999999999999999999 99999999999999999999999999765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.85  E-value=1.4e-21  Score=195.09  Aligned_cols=130  Identities=22%  Similarity=0.351  Sum_probs=108.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||+|.+..+++.||||.++.... ..+.+.+|+.+                               
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~  300 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY  300 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence            4556789999999999999998899999999976543 35678888887                               


Q ss_pred             ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc------
Q psy6828          95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY------  163 (392)
Q Consensus        95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------  163 (392)
                          +++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......      
T Consensus       301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  379 (495)
T 1opk_A          301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA  379 (495)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTC
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCC
Confidence                44443 23358999999999999999999999999 9999999999999999999999999986533211      


Q ss_pred             ------------------ccccccceeeeeee
Q psy6828         164 ------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------------~~~d~~s~g~~~~~  177 (392)
                                        ...|+||||+++|+
T Consensus       380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~e  411 (495)
T 1opk_A          380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  411 (495)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHH
Confidence                              12399999999998

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.85  E-value=4.3e-22  Score=205.61  Aligned_cols=110  Identities=18%  Similarity=0.227  Sum_probs=91.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||++.+..+++.||||++++...   ...+.+..|..+                            
T Consensus       343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E  422 (674)
T 3pfq_A          343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  422 (674)
T ss_dssp             EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred             eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence            4446689999999999999999999999999975422   223455666655                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                              +++... ..+++..+..|+.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus       423 ~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~gI-iHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          423 YVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTSE-ECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             CcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-EeccCChhhEEEcCCCcEEEeecceeec
Confidence                    222222 269999999999999999999999999 9999999999999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=1.9e-21  Score=199.53  Aligned_cols=127  Identities=20%  Similarity=0.289  Sum_probs=102.8

Q ss_pred             cCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------   94 (392)
                      .+.||+|+||.||+|.+.  .+++.||||+++....  ...+.+.+|+.+                              
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~  453 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCC
Confidence            457999999999999654  4568999999976433  345778889887                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-------  163 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------  163 (392)
                          +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.......       
T Consensus       454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i-iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE-eCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence                444333 269999999999999999999999999 9999999999999999999999999986532210       


Q ss_pred             -------------------ccccccceeeeeee
Q psy6828         164 -------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~  177 (392)
                                         ...|+||||+++|+
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~e  564 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE  564 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHH
Confidence                               12389999999888

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.85  E-value=9.9e-22  Score=192.67  Aligned_cols=133  Identities=16%  Similarity=0.202  Sum_probs=105.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..+|...+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+                            
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            345777889999999999999999999999999997643 333445555554                            


Q ss_pred             ------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--EEEeccccchhcc
Q psy6828          95 ------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--VKLADFGLTEFKR  159 (392)
Q Consensus        95 ------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--~kl~DFGla~~~~  159 (392)
                                  +++... ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.  +||+|||+++...
T Consensus       175 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          175 CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI-IHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTE-ECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence                        222222 2248999999999999999999999999 99999999999999887  9999999986543


Q ss_pred             cccc--------------------ccccccceeeeeee
Q psy6828         160 DAEY--------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~~--------------------~~~d~~s~g~~~~~  177 (392)
                      ....                    ...|+||+|+++|+
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  291 (429)
T 3kvw_A          254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAE  291 (429)
T ss_dssp             CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHH
T ss_pred             CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHH
Confidence            2211                    12399999999998

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.85  E-value=8.1e-22  Score=190.22  Aligned_cols=113  Identities=17%  Similarity=0.286  Sum_probs=96.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                          
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            345667789999999999999999999999999965432   234567788877                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        95 e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQRI-IHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             CCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCcHHHeEECCCCCEEEeccceeeec
Confidence                     33333 2369999999999999999999999999 99999999999999999999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.85  E-value=2e-21  Score=188.76  Aligned_cols=128  Identities=18%  Similarity=0.238  Sum_probs=99.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..++..+.||+|+||+||++.+..+|+.||||+++...     .+.+|+.+                             
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcch-----hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            34444567999999999999999999999999996442     23334333                             


Q ss_pred             -----------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhcc
Q psy6828          95 -----------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~~  159 (392)
                                 +++... ...+++.++..++.||+.||.|||++++ +||||||+|||++.   ++.+||+|||+++...
T Consensus       137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKETT  215 (400)
T ss_dssp             EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCcCcceEEEecCCCCccEEEEecccccccC
Confidence                       333322 2359999999999999999999999999 99999999999987   7889999999997543


Q ss_pred             ccc----------------------cccccccceeeeeee
Q psy6828         160 DAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                      ....|+||+|+++|+
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  255 (400)
T 1nxk_A          216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  255 (400)
T ss_dssp             -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHH
T ss_pred             CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHH
Confidence            211                      112399999999998

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.85  E-value=9.1e-22  Score=186.04  Aligned_cols=132  Identities=20%  Similarity=0.257  Sum_probs=102.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||||+++....  ...+.+.+|+.+                           
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  113 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE  113 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence            456777889999999999999999999999999976543  234556778777                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-----CCceEEEeccccchhccccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-----SRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-----~~~~~kl~DFGla~~~~~~~  162 (392)
                             +++.... .+++..+..++.|++.||.|||++++ +||||||+|||++     .++.+||+|||+++......
T Consensus       114 ~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~  191 (329)
T 3gbz_A          114 YAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRC-LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI  191 (329)
T ss_dssp             CCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC---
T ss_pred             cCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCE-ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc
Confidence                   3333332 59999999999999999999999999 9999999999994     45569999999997543111


Q ss_pred             ------------------------cccccccceeeeeee
Q psy6828         163 ------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------------~~~~d~~s~g~~~~~  177 (392)
                                              ....|+||+|+++|+
T Consensus       192 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  230 (329)
T 3gbz_A          192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAE  230 (329)
T ss_dssp             --------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence                                    122389999999888

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=1.6e-21  Score=181.64  Aligned_cols=133  Identities=24%  Similarity=0.276  Sum_probs=106.0

Q ss_pred             eeeeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      ..|...+.||+|+||.||+|.    +..+++.||+|.+..... ...+.+.+|+.+                        
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            445667789999999999998    567899999999975432 344667788877                        


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                   +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCc-ccCCCchheEEEcCCCCEEECcccccccccCC
Confidence                         4443333469999999999999999999999999 99999999999999999999999998764332


Q ss_pred             cc--------------------------ccccccceeeeeee
Q psy6828         162 EY--------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~~--------------------------~~~d~~s~g~~~~~  177 (392)
                      ..                          ...|+||+|+++|+
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  221 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE  221 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHH
Confidence            10                          12389999999998

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.84  E-value=2.6e-21  Score=181.28  Aligned_cols=133  Identities=20%  Similarity=0.275  Sum_probs=104.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+                           
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            34557778889999999999999999999999999987766667788888887                           


Q ss_pred             ---------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEecc
Q psy6828          95 ---------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADF  152 (392)
Q Consensus        95 ---------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DF  152 (392)
                                           ++++  ...+++..+..++.|++.||.|||++++ +||||||+||+++ .++.+||+||
T Consensus        89 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSANV-LHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             --CCSCSEEEEEEECCSEEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccccccCceeEEeeccCCCHHHHhh--cCCccHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCeEEEccC
Confidence                                 1111  1258999999999999999999999999 9999999999997 5679999999


Q ss_pred             ccchhcccc---------------------------ccccccccceeeeeee
Q psy6828         153 GLTEFKRDA---------------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       153 Gla~~~~~~---------------------------~~~~~d~~s~g~~~~~  177 (392)
                      |+++.....                           .....|+||+|+++|+
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~e  217 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  217 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHH
Confidence            998754211                           0112399999999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.84  E-value=2.4e-21  Score=185.78  Aligned_cols=132  Identities=23%  Similarity=0.300  Sum_probs=108.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||||++..... ...+.+.+|+.+                           
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            3457778889999999999999999999999999975433 344678888887                           


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                                  ++++..  .+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus       106 ~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          106 YIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence                        222222  58999999999999999999999999 999999999999999999999999987543211


Q ss_pred             ---------------------------cccccccceeeeeee
Q psy6828         163 ---------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------------~~~~d~~s~g~~~~~  177 (392)
                                                 ....|+||+|+++|+
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  224 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE  224 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHH
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHH
Confidence                                       112389999999988

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.84  E-value=2.8e-22  Score=195.23  Aligned_cols=114  Identities=17%  Similarity=0.180  Sum_probs=94.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||+||++.++.+|+.||||++++...   ...+.+.+|..+                          
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm  140 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM  140 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            446667889999999999999999999999999975332   122335566655                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++......+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-iHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY-VHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecccCHHHeeecCCCCEEEeechhheec
Confidence                     3443333369999999999999999999999999 99999999999999999999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.84  E-value=5.4e-21  Score=178.84  Aligned_cols=133  Identities=18%  Similarity=0.237  Sum_probs=106.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEE-----eecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIG-----IYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------   94 (392)
                      ..|...+.||+|+||.||++.+     ..+++.||+|.++.... ...+.+.+|+.+                       
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~  102 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence            4566678899999999999985     34678999999976543 445677888776                       


Q ss_pred             -------------HHhhcCC-----------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 -------------DIMENED-----------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 -------------~~l~~~~-----------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                   +++....                 ..+++.++..++.|++.||.|||++++ +||||||+||+++.+
T Consensus       103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHG  181 (313)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEETT
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCccceEEEcCC
Confidence                         3333222                 148999999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhcccccc-------------------------ccccccceeeeeee
Q psy6828         145 WVVKLADFGLTEFKRDAEY-------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       145 ~~~kl~DFGla~~~~~~~~-------------------------~~~d~~s~g~~~~~  177 (392)
                      +.+||+|||+++.......                         ...|+||+|+++|+
T Consensus       182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  239 (313)
T 1t46_A          182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (313)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHH
Confidence            9999999999976533211                         12388999988888

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.84  E-value=6.4e-22  Score=198.60  Aligned_cols=133  Identities=20%  Similarity=0.209  Sum_probs=106.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.++.+|+.||||++.+...   ...+.+.+|..+                          
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            446667789999999999999999999999999975432   224567777776                          


Q ss_pred             ---------HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ---------DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                               +++...   ...+++..+..++.||+.||.|||++++ +||||||+|||++.+|.+||+|||+++......
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI-vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~  343 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ  343 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC-cccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence                     223221   2359999999999999999999999999 999999999999999999999999997643221


Q ss_pred             c-----------------------ccccccceeeeeee
Q psy6828         163 Y-----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~-----------------------~~~d~~s~g~~~~~  177 (392)
                      .                       ...|+||+|+++|+
T Consensus       344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilye  381 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE  381 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             cccccccCCccccChhhhcCCCCChHHhcCcchHHHHH
Confidence            1                       11288999998888

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.84  E-value=1.6e-21  Score=182.97  Aligned_cols=112  Identities=21%  Similarity=0.284  Sum_probs=92.9

Q ss_pred             eeec-cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLS-SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~-~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      .|.. .+.||+|+||.||+|.+..+++.||||++.+......+.+.+|+.+                             
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            3444 5789999999999999999999999999977655556677788776                             


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~~~  158 (392)
                             +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.   +||+|||+++..
T Consensus        93 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           93 MRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKGI-AHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             CCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-eeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence                   222222 258999999999999999999999999 99999999999988766   999999998654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.84  E-value=1.1e-21  Score=186.98  Aligned_cols=114  Identities=25%  Similarity=0.352  Sum_probs=95.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||++.....  .....+.+|+.+                           
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            456777889999999999999999999999999865433  223455667766                           


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                     +.+......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        97 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           97 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence                           2222333469999999999999999999999999 99999999999999999999999998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.84  E-value=4.1e-21  Score=178.14  Aligned_cols=126  Identities=21%  Similarity=0.289  Sum_probs=100.7

Q ss_pred             CCCCCcceeEEEEEEE--eecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIG--IYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~--~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      +.||+|+||.||+|.+  ..+++.||||.++....  ...+.+.+|+.+                               
T Consensus        23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  102 (291)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCC
Confidence            3899999999999954  45678999999976532  345678888887                               


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------  162 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------  162 (392)
                         +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......         
T Consensus       103 ~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  180 (291)
T 1xbb_A          103 PLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  180 (291)
T ss_dssp             EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCCe-EcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccC
Confidence               444433 259999999999999999999999999 999999999999999999999999987543211         


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  212 (291)
T 1xbb_A          181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE  212 (291)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             CCCceeeChHHhccCCCChhhhHHHHHHHHHH
Confidence                             012499999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.84  E-value=1.7e-21  Score=184.07  Aligned_cols=132  Identities=23%  Similarity=0.224  Sum_probs=97.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~----------------------   94 (392)
                      ..|...+.||+|+||.||++.+.   .+++.||+|++++...    .....+.+|+.+                      
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            44666778999999999999875   5899999999986532    233456667766                      


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                   +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  174 (327)
T 3a62_A           97 YLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGI-IYRDLKPENIMLNHQGHVKLTDFGLCKESIHD  174 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred             EEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCE-EcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence                         223222 258999999999999999999999999 99999999999999999999999998753211


Q ss_pred             c-----------------------cccccccceeeeeee
Q psy6828         162 E-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      .                       ....|+||+|+++|+
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  213 (327)
T 3a62_A          175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD  213 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHH
T ss_pred             CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHH
Confidence            1                       112389999999988

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.84  E-value=6.3e-22  Score=189.69  Aligned_cols=132  Identities=18%  Similarity=0.175  Sum_probs=102.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||++.+..+++.||||++.+... ..+.+.+|+.+                            
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            3456777889999999999999999999999999976543 22456677766                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--EEEeccccchhccccc---
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--VKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--~kl~DFGla~~~~~~~---  162 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.  +||+|||+++......   
T Consensus        98 ~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~~i-vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~  175 (361)
T 3uc3_A           98 ASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSMQI-CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK  175 (361)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence                   222222 259999999999999999999999999 99999999999987765  9999999987321111   


Q ss_pred             -------------------ccc-ccccceeeeeee
Q psy6828         163 -------------------YTG-TDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~-~d~~s~g~~~~~  177 (392)
                                         ... .|+||+|+++|+
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYV  210 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHH
Confidence                               011 499999999998

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.84  E-value=1.8e-21  Score=181.33  Aligned_cols=129  Identities=19%  Similarity=0.267  Sum_probs=104.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...++..+.||+|+||.||++.+..+++.||+|.++...     .+.+|+.+                            
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccH-----HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            334444577999999999999999999999999996542     23344333                            


Q ss_pred             ------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhc
Q psy6828          95 ------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~  158 (392)
                                  +++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.   ++.+||+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence                        333322 2359999999999999999999999999 99999999999998   788999999999876


Q ss_pred             ccccc-ccccccceeeeeee
Q psy6828         159 RDAEY-TGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~~-~~~d~~s~g~~~~~  177 (392)
                      ..... ...|+||+|+++|+
T Consensus       171 ~~~~~~~~~DiwslG~il~e  190 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYI  190 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHH
T ss_pred             ccccCCchhhHHHHHHHHHH
Confidence            65443 45699999999999

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=7.9e-22  Score=198.67  Aligned_cols=134  Identities=16%  Similarity=0.159  Sum_probs=108.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+|+.||||++.+...   .....+.+|+.+                         
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            3446667889999999999999999999999999965432   234556777777                         


Q ss_pred             ----------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828          95 ----------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY  163 (392)
Q Consensus        95 ----------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  163 (392)
                                +++... ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.......
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI-vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~  341 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI-VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  341 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence                      233322 2249999999999999999999999999 9999999999999999999999999976533211


Q ss_pred             ----------------------ccccccceeeeeee
Q psy6828         164 ----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~  177 (392)
                                            ...|+||+|+++|+
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilye  377 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE  377 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHH
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence                                  12299999999998

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.84  E-value=1.1e-21  Score=185.36  Aligned_cols=132  Identities=22%  Similarity=0.336  Sum_probs=101.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcE----EEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRI----FAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.    ||+|.+..... ...+.+.+|+.+                         
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~   95 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT   95 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEE
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            355567899999999999998877765    58888864332 345678888877                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  174 (327)
T 3poz_A           96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY  174 (327)
T ss_dssp             ECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe-eCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence                     4454445579999999999999999999999999 9999999999999999999999999986532211  


Q ss_pred             -----------------------ccccccceeeeeee
Q psy6828         164 -----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -----------------------~~~d~~s~g~~~~~  177 (392)
                                             ...|+||+|+++|+
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  211 (327)
T 3poz_A          175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  211 (327)
T ss_dssp             -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCCccccccChHHhccCCCCchhhhhhhHHHHHH
Confidence                                   12389999998888

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.2e-21  Score=190.16  Aligned_cols=135  Identities=24%  Similarity=0.302  Sum_probs=108.8

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+                          
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            45677888899999999999999999999999999975432 335566778777                          


Q ss_pred             -----------HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchh
Q psy6828          95 -----------DIMENEDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~  157 (392)
                                 ++++....  .+++..+..++.|++.||.|||++++ +||||||+|||+    +.++.+||+|||+++.
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI-VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE-EECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence                       22322111  28999999999999999999999999 999999999999    7778899999999976


Q ss_pred             cccccc------------------------------ccccccceeeeeee
Q psy6828         158 KRDAEY------------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~~------------------------------~~~d~~s~g~~~~~  177 (392)
                      ......                              ...|+||+|+++|+
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~e  215 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH  215 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHH
Confidence            432211                              12399999999998

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.84  E-value=3.9e-21  Score=175.90  Aligned_cols=131  Identities=21%  Similarity=0.285  Sum_probs=105.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+. ++..||+|.+...... .+.+.+|+.+                             
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            44566778999999999999644 6778999999765443 3557778776                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                            +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......      
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF-IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE-EESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence                  3333333359999999999999999999999999 999999999999999999999999987543221      


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  197 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE  197 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHH
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHH
Confidence                              113489999999888

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.84  E-value=7.4e-21  Score=177.98  Aligned_cols=134  Identities=20%  Similarity=0.251  Sum_probs=106.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKS-VDITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||++.+.     .+++.||+|.++... ....+.+.+|+.+                      
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            345666778999999999999874     345899999997653 3455778888887                      


Q ss_pred             -------------HHhhcCC-----------------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCc
Q psy6828          95 -------------DIMENED-----------------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASN  138 (392)
Q Consensus        95 -------------~~l~~~~-----------------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~N  138 (392)
                                   +++....                       ..+++.++..++.|++.||.|||++++ +||||||+|
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dikp~N  180 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL-VHRDLAARN  180 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCC-cccccchhe
Confidence                         3333211                       238999999999999999999999999 999999999


Q ss_pred             eEEcCCceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828         139 CLVDSRWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       139 Ill~~~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      |+++.++.+||+|||+++......                         ....|+||+|+++|+
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  244 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  244 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHH
Confidence            999999999999999987542211                         112399999999998

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.84  E-value=2e-21  Score=187.72  Aligned_cols=134  Identities=19%  Similarity=0.222  Sum_probs=106.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||+||+|.+..+++.||||++.... ...+.+.+|+.+                           
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            3466777888999999999999999999999999997542 334455666554                           


Q ss_pred             --------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCc--------
Q psy6828          95 --------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRW--------  145 (392)
Q Consensus        95 --------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~--------  145 (392)
                                          .+.......+++..+..++.||+.||.|||++ ++ +||||||+|||++.++        
T Consensus       114 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~gi-vHrDikp~NIll~~~~~~~~~~~~  192 (397)
T 1wak_A          114 GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRI-IHTDIKPENILLSVNEQYIRRLAA  192 (397)
T ss_dssp             ETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE-ECCCCSGGGEEECCCHHHHHHHHH
T ss_pred             CCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHeeEeccchhhhhhhh
Confidence                                11122223599999999999999999999998 99 9999999999999776        


Q ss_pred             -----------------------------------------eEEEeccccchhccccc--------------------cc
Q psy6828         146 -----------------------------------------VVKLADFGLTEFKRDAE--------------------YT  164 (392)
Q Consensus       146 -----------------------------------------~~kl~DFGla~~~~~~~--------------------~~  164 (392)
                                                               .+||+|||+++......                    ..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  272 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT  272 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence                                                     79999999987543221                    12


Q ss_pred             cccccceeeeeee
Q psy6828         165 GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ~~d~~s~g~~~~~  177 (392)
                      ..|+||+|+++|+
T Consensus       273 ~~DiwslG~il~e  285 (397)
T 1wak_A          273 PADIWSTACMAFE  285 (397)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            2389999999988

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.84  E-value=5e-21  Score=177.46  Aligned_cols=112  Identities=21%  Similarity=0.301  Sum_probs=89.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||++.+   ...||+|.++....  ...+.+.+|+.+                          
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~---~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEES---SSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEE---cCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence            45566778899999999999974   34699999976543  455778888888                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i-~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  170 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGLATEK  170 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccccCccceEEECCCCCEEEccceecccc
Confidence                    4554455579999999999999999999999999 99999999999999999999999998743

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=2.9e-21  Score=190.69  Aligned_cols=130  Identities=23%  Similarity=0.285  Sum_probs=105.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .+...+.||+|+||.||+|.+. +++.||||.++.... ..+.+.+|+.+                              
T Consensus       189 ~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~  266 (454)
T 1qcf_A          189 SLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK  266 (454)
T ss_dssp             GEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCC
Confidence            3455678999999999999854 578899999986543 35678889887                              


Q ss_pred             ----HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 ----DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 ----~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                          +++... ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......       
T Consensus       267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~  345 (454)
T 1qcf_A          267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA  345 (454)
T ss_dssp             CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSS
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCC
Confidence                333322 1258889999999999999999999999 999999999999999999999999998653211       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||||+++|+
T Consensus       346 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  377 (454)
T 1qcf_A          346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLME  377 (454)
T ss_dssp             SSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence                             012399999999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.84  E-value=3e-21  Score=185.61  Aligned_cols=134  Identities=22%  Similarity=0.300  Sum_probs=105.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||||++.....  ...+.+.+|+.+                          
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            3456778889999999999999999999999999976433  345667788777                          


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                 ++.+.....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~  199 (371)
T 4exu_A          121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV-VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  199 (371)
T ss_dssp             CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred             eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCC-cCCCcCHHHeEECCCCCEEEEecCcccccccCcC
Confidence                       0011112258999999999999999999999999 999999999999999999999999997532211 


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  234 (371)
T ss_dssp             CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHH
Confidence                                123499999999998

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.84  E-value=1.7e-21  Score=179.20  Aligned_cols=133  Identities=23%  Similarity=0.221  Sum_probs=109.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      .+.|...+.||+|+||.||++.+..+++.||+|.+.+......+.+.+|+.+                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            4556777889999999999999999999999999976655556778888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhccccc--
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~~~~~--  162 (392)
                             +++... ..+++.++..++.|++.||.|||++++ +||||||+||++   +.++.+||+|||++.......  
T Consensus        88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLNV-AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence                   222222 258999999999999999999999999 999999999999   778899999999987543221  


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||+|+++|+
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~  199 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYV  199 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHH
T ss_pred             hccCCCCCccChHHhcccCCchhhehhHHHHHHH
Confidence                               123499999999988

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.84  E-value=5.8e-22  Score=195.28  Aligned_cols=112  Identities=19%  Similarity=0.215  Sum_probs=86.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI   96 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~   96 (392)
                      |...+.||+|+||.||++.+..+|+.||||++.+...   .....+.+|+.+                          ++
T Consensus       150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~  229 (446)
T 4ejn_A          150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY  229 (446)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred             cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence            5557789999999999999999999999999965321   233456666665                          22


Q ss_pred             hhcC--------CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          97 MENE--------DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        97 l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                      +..+        ...+++..+..++.|++.||.|||+ +++ +||||||+|||++.++.+||+|||+++..
T Consensus       230 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~gi-iHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          230 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             CSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCC-CCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCE-EECCCCHHHEEECCCCCEEEccCCCceec
Confidence            2211        1258999999999999999999998 899 99999999999999999999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.84  E-value=8.3e-21  Score=174.79  Aligned_cols=132  Identities=23%  Similarity=0.315  Sum_probs=105.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+ .+++.||+|.+..... ..+.+.+|+.+                            
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEE-cCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence            35566778899999999999984 4677899999976543 34567788877                            


Q ss_pred             ------HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828          95 ------DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY----  163 (392)
Q Consensus        95 ------~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~----  163 (392)
                            +++.... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++........    
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence                  2222211 158999999999999999999999999 9999999999999999999999999976532211    


Q ss_pred             --------------------ccccccceeeeeee
Q psy6828         164 --------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 --------------------~~~d~~s~g~~~~~  177 (392)
                                          ...|+||+|+++|+
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  202 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence                                12399999999998

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.84  E-value=3.3e-21  Score=183.82  Aligned_cols=132  Identities=22%  Similarity=0.227  Sum_probs=96.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+.+                           
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            3455777889999999999999999999999999997543  23456667666                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhccccc-
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~~~~~-  162 (392)
                              +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.   ++.+||+|||+++...... 
T Consensus       129 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          129 LVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGI-VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             CCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             eCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence                    333332 258999999999999999999999999 99999999999975   7899999999987643221 


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  242 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYI  242 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHH
Confidence                                 112389999999988

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.84  E-value=3.7e-22  Score=188.29  Aligned_cols=131  Identities=21%  Similarity=0.296  Sum_probs=101.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH-HHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI-TRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||.||+|.+..+++.||+|++....... ...+.+|+.+                              
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            556678999999999999999999999999996543211 1123345554                              


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                          +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......        
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  162 (324)
T 3mtl_A           84 KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV-LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV  162 (324)
T ss_dssp             EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-EESSCCGGGEEECTTCCEEECSSSEEECC------------
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-cCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccC
Confidence                4444444469999999999999999999999999 999999999999999999999999987432111        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (324)
T 3mtl_A          163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYE  193 (324)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             cccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence                            112388888888888

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.84  E-value=6.1e-21  Score=177.44  Aligned_cols=107  Identities=23%  Similarity=0.307  Sum_probs=87.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+  +++.||||++.....   +.+..|.++                             
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            4456677899999999999975  799999999965432   333444433                             


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHh--------cCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLH--------DSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH--------~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                                  ++++.  ..+++..+..++.|++.||.|||        ++++ +||||||+|||++.++.+||+|||+
T Consensus        83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i-vH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI-AHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEE-ECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCe-ecCCCChHhEEEcCCCCEEEeeCCC
Confidence                        33322  25899999999999999999999        8999 9999999999999999999999999


Q ss_pred             chhc
Q psy6828         155 TEFK  158 (392)
Q Consensus       155 a~~~  158 (392)
                      ++..
T Consensus       160 a~~~  163 (301)
T 3q4u_A          160 AVMH  163 (301)
T ss_dssp             CEEE
T ss_pred             eeec
Confidence            8643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.84  E-value=1.1e-21  Score=187.18  Aligned_cols=135  Identities=20%  Similarity=0.231  Sum_probs=105.5

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH----------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI----------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~----------------------   94 (392)
                      ....|...+.||+|+||+||+|.+..+|+.||||++.....     ...+.+.+|+.+                      
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            34567778889999999999999999999999999864321     135668888887                      


Q ss_pred             ----HHhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccc
Q psy6828          95 ----DIMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLT  155 (392)
Q Consensus        95 ----~~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla  155 (392)
                          +++..            ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.   +||+|||++
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI-IHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCChHHeEEecCCCCCcEEEecCcce
Confidence                22211            12248999999999999999999999999 99999999999987654   999999999


Q ss_pred             hhcccccc-----------------------ccccccceeeeeee
Q psy6828         156 EFKRDAEY-----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       156 ~~~~~~~~-----------------------~~~d~~s~g~~~~~  177 (392)
                      +.......                       ...|+||+|+++|+
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  225 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI  225 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHH
Confidence            76543211                       12388888888887

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.84  E-value=1.2e-21  Score=184.77  Aligned_cols=115  Identities=26%  Similarity=0.372  Sum_probs=99.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------   94 (392)
                      .+.|...+.||+|+||.||++.    +..+++.||||++........+.+.+|+.+                        
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            3456677889999999999998    567899999999988777777788999888                        


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                   +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCChhhEEECCCCCEEEcccccceec
Confidence                         3333333359999999999999999999999999 99999999999999999999999999764

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.84  E-value=1.4e-21  Score=184.47  Aligned_cols=113  Identities=24%  Similarity=0.344  Sum_probs=92.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||+||++.+..+++.||||++..... ...+.+.+|+.+                            
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            345667789999999999999999999999999965433 334557777776                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++.. ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~gi-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           87 CSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             CTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccchHHEEEeCCCCEEEEEeecccee
Confidence                   22222 2259999999999999999999999999 99999999999999999999999999754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.84  E-value=2.5e-21  Score=192.66  Aligned_cols=134  Identities=19%  Similarity=0.276  Sum_probs=110.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+|+.||||++.+...   ...+.+.+|+.+                        
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45667788899999999999999999999999999965432   345678888887                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhccc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~~~  160 (392)
                                 +++... ..+++.++..++.|++.||.|||++++ +||||||+|||+   +.++.+||+|||+++....
T Consensus       104 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNKI-VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             EECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             EEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence                       233222 369999999999999999999999999 999999999999   4678999999999976533


Q ss_pred             cc---------------------cccccccceeeeeee
Q psy6828         161 AE---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~~---------------------~~~~d~~s~g~~~~~  177 (392)
                      ..                     ....|+||+|+++|+
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~  219 (484)
T 3nyv_A          182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYI  219 (484)
T ss_dssp             CCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHH
T ss_pred             ccccccCCCCccccCceeecCCCCCcceeHHHHHHHHH
Confidence            21                     123499999999999

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.84  E-value=4.2e-21  Score=180.76  Aligned_cols=133  Identities=23%  Similarity=0.260  Sum_probs=108.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------HHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------ITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+|+.||+|.+......      ..+.+.+|+.+                      
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            44567778899999999999999999999999999754321      35678888877                      


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----eEEEeccccchh
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTEF  157 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~~  157 (392)
                                   +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++    .+||+|||+++.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i-vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence                         444333 368999999999999999999999999 9999999999999887    799999999876


Q ss_pred             ccccc----------------------cccccccceeeeeee
Q psy6828         158 KRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      .....                      ....|+||+|+++|+
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  210 (321)
T 2a2a_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  210 (321)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHH
Confidence            43321                      112389999999888

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=1e-20  Score=172.84  Aligned_cols=130  Identities=22%  Similarity=0.343  Sum_probs=106.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||++.+. +++.||+|.+...... .+.+.+|+.+                              
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             heeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            3555677999999999999865 6789999999876543 3567788877                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                           +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......       
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  165 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  165 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence                 4554444468999999999999999999999999 999999999999999999999999987542211       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  197 (267)
T 3t9t_A          166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  197 (267)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccChhhhcCCCccchhchhhhHHHHHH
Confidence                             112499999999998

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.83  E-value=1.5e-21  Score=187.81  Aligned_cols=134  Identities=21%  Similarity=0.244  Sum_probs=103.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------HHhhcC-------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------DIMENE-------  100 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~~l~~~-------  100 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.+             ++....       
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            345677788999999999999999999999999997543  2445667788877             000000       


Q ss_pred             -----------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828         101 -----------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus       101 -----------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                       ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  182 (371)
T 2xrw_A          104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  182 (371)
T ss_dssp             EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred             ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCe-ecccCCHHHEEEcCCCCEEEEEeecccccccccc
Confidence                             1148999999999999999999999999 999999999999999999999999997643221 


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  218 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  218 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHH
Confidence                                 123499999999998

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.83  E-value=6.8e-21  Score=187.88  Aligned_cols=127  Identities=23%  Similarity=0.279  Sum_probs=102.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||++..  +|+.||||.++...  ..+.+.+|+.+                               
T Consensus       195 ~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~  270 (450)
T 1k9a_A          195 LKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA  270 (450)
T ss_dssp             EEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred             eEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence            44567899999999999975  48899999997654  34567888887                               


Q ss_pred             -----HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828          95 -----DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------  162 (392)
Q Consensus        95 -----~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------  162 (392)
                           +++.... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......      
T Consensus       271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  349 (450)
T 1k9a_A          271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP  349 (450)
T ss_dssp             TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTTSCEEECCCTTCEECC------CCC
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCC
Confidence                 3333222 237999999999999999999999999 999999999999999999999999987532211      


Q ss_pred             --------------cccccccceeeeeee
Q psy6828         163 --------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------~~~~d~~s~g~~~~~  177 (392)
                                    ....|+||||+++|+
T Consensus       350 ~~y~aPE~~~~~~~~~~sDvwslG~~l~e  378 (450)
T 1k9a_A          350 VKWTAPEALREKKFSTKSDVWSFGILLWE  378 (450)
T ss_dssp             TTTSCHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred             cceeCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence                          112499999999998

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.83  E-value=3.1e-21  Score=180.48  Aligned_cols=131  Identities=18%  Similarity=0.229  Sum_probs=106.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+|+.||+|++.....  ...+.+.+|+.+                            
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            35566789999999999999999999999999866543  335567778877                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......     
T Consensus        84 ~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (311)
T 4agu_A           84 CDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNC-IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD  161 (311)
T ss_dssp             CSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCC-cCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCC
Confidence                   2222 23369999999999999999999999999 999999999999999999999999987543111     


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||+|+++|+
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  195 (311)
T 4agu_A          162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE  195 (311)
T ss_dssp             ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHH
T ss_pred             CcCCccccChHHHhcCCCCCcchhhHHHHHHHHH
Confidence                               122388999998888

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.83  E-value=7.5e-22  Score=185.87  Aligned_cols=134  Identities=19%  Similarity=0.272  Sum_probs=102.7

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------HHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------ITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~---------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||.+......      ..+.+.+|+.+                     
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            455677788999999999999999999999999998653211      01112222222                     


Q ss_pred             -----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEeccccch
Q psy6828          95 -----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADFGLTE  156 (392)
Q Consensus        95 -----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DFGla~  156 (392)
                                       +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++ +++.+||+|||+++
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-EeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence                             222222 258999999999999999999999999 9999999999999 77999999999987


Q ss_pred             hcccccc----------------------ccccccceeeeeee
Q psy6828         157 FKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      .......                      ...|+||+|+++|+
T Consensus       199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  241 (320)
T 3a99_A          199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  241 (320)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHH
Confidence            6433211                      12389999999988

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=1.1e-20  Score=178.88  Aligned_cols=132  Identities=21%  Similarity=0.277  Sum_probs=101.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      .+...+.||+|+||.||+|.+..++    ..||||.++.... .....+.+|+.+                         
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  124 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII  124 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence            3455678999999999999977553    3599999976533 445568888877                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--  162 (392)
                                +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......  
T Consensus       125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  203 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  203 (333)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence                      4555554579999999999999999999999999 999999999999999999999999997643211  


Q ss_pred             ------------------------cccccccceeeeeee
Q psy6828         163 ------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------------~~~~d~~s~g~~~~~  177 (392)
                                              ....|+||+|+++|+
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  242 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE  242 (333)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHH
Confidence                                    012389999999887

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.83  E-value=4.7e-21  Score=181.18  Aligned_cols=133  Identities=22%  Similarity=0.250  Sum_probs=105.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||+|++.....  ...+.+.+|+.+                           
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            446667789999999999999999999999999865443  334567778776                           


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc------
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA------  161 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~------  161 (392)
                             ..+......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....      
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  183 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD  183 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCE-EccCcChheEEEcCCCcEEEEeCCCceeecCCccccCC
Confidence                   1122223369999999999999999999999999 99999999999999999999999998753221      


Q ss_pred             ------------------ccccccccceeeeeee
Q psy6828         162 ------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------------~~~~~d~~s~g~~~~~  177 (392)
                                        .....|+||+|+++|+
T Consensus       184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~  217 (331)
T 4aaa_A          184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE  217 (331)
T ss_dssp             CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             CcCCccccCcccccCCCCcchHHHHHHHHHHHHH
Confidence                              0122499999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=5.2e-21  Score=184.71  Aligned_cols=130  Identities=19%  Similarity=0.259  Sum_probs=99.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||+|.+..+|+.||||++.......    .+|+.+                            
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~----~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~   81 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK----NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ   81 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSC----CHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchH----HHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence            345677788999999999999999999999999986542211    122222                            


Q ss_pred             --------------------------------------------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCC
Q psy6828          95 --------------------------------------------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSA  127 (392)
Q Consensus        95 --------------------------------------------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~  127 (392)
                                                                  +++.   .....+++..+..++.|++.||.|||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A           82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             ----------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence                                                        0111   12336999999999999999999999999


Q ss_pred             cccccCCCCCceEEc-CCceEEEeccccchhccccc-----------------------cccccccceeeeeee
Q psy6828         128 LRYHGNLKASNCLVD-SRWVVKLADFGLTEFKRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       128 iiiHrDlKp~NIll~-~~~~~kl~DFGla~~~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      + +||||||+|||++ .++.+||+|||+++......                       ....|+||+|+++|+
T Consensus       162 i-~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (383)
T 3eb0_A          162 I-CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE  234 (383)
T ss_dssp             E-ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             C-ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence            9 9999999999997 68999999999997542211                       112388999988888

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.83  E-value=7.7e-21  Score=176.97  Aligned_cols=135  Identities=23%  Similarity=0.235  Sum_probs=108.8

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+                           
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            45567777889999999999999999999999999987665556778888877                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc------
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD------  160 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~------  160 (392)
                              +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.....      
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  175 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI-IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD  175 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence                    3333333469999999999999999999999999 9999999999999999999999998753110      


Q ss_pred             ----------------------cccccccccceeeeeee
Q psy6828         161 ----------------------AEYTGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ----------------------~~~~~~d~~s~g~~~~~  177 (392)
                                            ......|+||+|+++|+
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  214 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE  214 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHH
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHH
Confidence                                  01123599999999998

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.83  E-value=3.4e-21  Score=177.30  Aligned_cols=131  Identities=26%  Similarity=0.345  Sum_probs=106.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||.||++.+..+|+.||+|.+.+...   ...+.+.+|+.+                            
T Consensus        13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   92 (278)
T 3cok_A           13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM   92 (278)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence            5566789999999999999989999999999965432   224567788877                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-----  162 (392)
                             +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......     
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  171 (278)
T 3cok_A           93 CHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI-LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT  171 (278)
T ss_dssp             CTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSSCCGGGEEECTTCCEEECCCTTCEECC--------
T ss_pred             CCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCccee
Confidence                   4555554579999999999999999999999999 999999999999999999999999987543211     


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  204 (278)
T 3cok_A          172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYT  204 (278)
T ss_dssp             --------------------CTHHHHHHHHHHH
T ss_pred             ccCCCCcCCcchhcCCCCCchhhHHHHHHHHHH
Confidence                              123488888888887

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.83  E-value=5.1e-21  Score=181.93  Aligned_cols=112  Identities=20%  Similarity=0.289  Sum_probs=93.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||++.+ .+++.||||++.....  ...+.+.+|+.+                          
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            44577788899999999999986 5689999999875433  445667788776                          


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++ ++.+||+|||+++..
T Consensus        87 v~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i-iHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           87 VMECGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EECCCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCcceEEEE-CCcEEEeeccccccc
Confidence                      333332 268999999999999999999999999 9999999999997 678999999999764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.83  E-value=4.6e-22  Score=184.11  Aligned_cols=136  Identities=19%  Similarity=0.256  Sum_probs=107.4

Q ss_pred             ccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          41 HTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        41 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      .....|...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+                         
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            345668888999999999999999999999999999875432 335677888877                         


Q ss_pred             ----------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhc
Q psy6828          95 ----------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~  158 (392)
                                +++..   ....+++..+..++.|++.||.|||++++ +||||||+||++   +.++.+||+|||+++..
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV-VHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCE-EECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence                      22211   12369999999999999999999999999 999999999999   45578999999999754


Q ss_pred             cccc---------------------cccccccceeeeeee
Q psy6828         159 RDAE---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~---------------------~~~~d~~s~g~~~~~  177 (392)
                      ....                     ....|+||+|+++|+
T Consensus       178 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~  217 (285)
T 3is5_A          178 KSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYF  217 (285)
T ss_dssp             ---------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred             CCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHH
Confidence            3221                     113499999999998

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.83  E-value=1.9e-20  Score=177.24  Aligned_cols=134  Identities=19%  Similarity=0.263  Sum_probs=104.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-------ecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-------YKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------   94 (392)
                      ...|...+.||+|+||.||+|.+.       .+++.||+|.++.... ...+.+.+|+.+                    
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            345667788999999999999865       4678899999976543 445667777776                    


Q ss_pred             ----------------HHhhcCC---------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 ----------------DIMENED---------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 ----------------~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                      +++....               ..+++.++..++.|++.||.|||++++ +||||||+||+++.
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~  192 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC-IHRDLAARNVLVTE  192 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECT
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCccceEEEcC
Confidence                            3333321               138999999999999999999999999 99999999999999


Q ss_pred             CceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828         144 RWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       144 ~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ++.+||+|||+++......                         ....|+||+|+++|+
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  251 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE  251 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHH
Confidence            9999999999987543211                         012389999999888

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=2.4e-21  Score=188.50  Aligned_cols=128  Identities=23%  Similarity=0.309  Sum_probs=92.8

Q ss_pred             eccCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      +..+.||+|+||.||+|.+.  .+++.||||.+......  +.+.+|+.+                              
T Consensus        24 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           24 YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             CSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             hcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            34678999999999999965  56889999999765432  346677766                              


Q ss_pred             ------HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccch
Q psy6828          95 ------DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTE  156 (392)
Q Consensus        95 ------~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~  156 (392)
                            +++..        ....+++..++.++.||+.||.|||++++ +||||||+|||+    +.++.+||+|||+++
T Consensus       102 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i-vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  180 (405)
T 3rgf_A          102 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFAR  180 (405)
T ss_dssp             CSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred             CCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCE-eCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence                  11110        11138999999999999999999999999 999999999999    677899999999997


Q ss_pred             hccccc---------------------------cccccccceeeeeee
Q psy6828         157 FKRDAE---------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~---------------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                           ....|+||+|+++|+
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  228 (405)
T 3rgf_A          181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  228 (405)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred             ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHH
Confidence            543210                           112399999999999

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.83  E-value=1.5e-20  Score=175.76  Aligned_cols=133  Identities=16%  Similarity=0.228  Sum_probs=100.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||+|++....   ....+.+.+|+.+                          
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            34666788999999999999999999999999997533   3455678888877                          


Q ss_pred             ---------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ---------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                               +++..   ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe-eCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence                     22221   23358999999999999999999999999 999999999999999999999999987543221


Q ss_pred             -----------------------cccccccceeeeeee
Q psy6828         163 -----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------------~~~~d~~s~g~~~~~  177 (392)
                                             ....|+||+|+++|+
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~  228 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  228 (310)
T ss_dssp             --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHH
Confidence                                   112389999999888

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.83  E-value=9.1e-21  Score=178.81  Aligned_cols=131  Identities=23%  Similarity=0.333  Sum_probs=104.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++....   .+.+.+|+.+                            
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            345677788999999999999999999999999997554   3456667665                            


Q ss_pred             -HHhhcCC-----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccccc-----
Q psy6828          95 -DIMENED-----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAE-----  162 (392)
Q Consensus        95 -~~l~~~~-----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~-----  162 (392)
                       +++....     ..+++.++..++.|++.||.|||++++ +||||||+|||++.++ .+||+|||+++......     
T Consensus       112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  190 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  190 (330)
T ss_dssp             EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSC
T ss_pred             EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccc
Confidence             1111111     148999999999999999999999999 9999999999999776 89999999997543211     


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~  223 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  223 (330)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             cccccccChhhhcCCCcCCchhhHHHHHHHHHH
Confidence                              112399999999998

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.83  E-value=5e-21  Score=182.75  Aligned_cols=115  Identities=23%  Similarity=0.273  Sum_probs=94.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEE-----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPI-----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||+|.     +..+++.||||.++.... ...+.+.+|+.+                      
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            3556677889999999999998     445668999999976543 445678888877                      


Q ss_pred             ---------------HHhhcCC----------------------------------------------------------
Q psy6828          95 ---------------DIMENED----------------------------------------------------------  101 (392)
Q Consensus        95 ---------------~~l~~~~----------------------------------------------------------  101 (392)
                                     +++....                                                          
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  180 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred             ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence                           3333221                                                          


Q ss_pred             -------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828         102 -------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus       102 -------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~i-vH~Dikp~NIll~~~~~~kl~Dfg~a~~~  243 (359)
T 3vhe_A          181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDI  243 (359)
T ss_dssp             ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             cccchhccccCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChhhEEEcCCCcEEEEeccceeee
Confidence                   118999999999999999999999999 99999999999999999999999999754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.83  E-value=1.5e-20  Score=176.84  Aligned_cols=116  Identities=20%  Similarity=0.282  Sum_probs=98.1

Q ss_pred             ccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          41 HTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        41 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      .....|...+.||+|+||.||+|.+ .+++.||||.+........+.+.+|+.+                          
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             HHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            3456677788999999999999985 4789999999987766667788899887                          


Q ss_pred             ---------HHhhcCC---cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ---------DIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------~~l~~~~---~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                               +++....   ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCe-ecCCCCHHHEEECCCCCEEEeeccccccc
Confidence                     2222111   248999999999999999999999999 99999999999999999999999998754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.83  E-value=4.7e-21  Score=185.54  Aligned_cols=112  Identities=19%  Similarity=0.283  Sum_probs=92.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||++.+.. ++.||||++.....  ...+.+.+|+.+                           
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            447778899999999999998654 89999999975533  445677888776                           


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                               +++.... .+++.++..++.||+.||.|||++++ +||||||+|||++ ++.+||+|||+++...
T Consensus       135 ~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i-vHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          135 MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             EECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTC-CCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             EecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence                     3333332 68999999999999999999999999 9999999999995 5899999999998653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.83  E-value=1.2e-20  Score=178.98  Aligned_cols=134  Identities=21%  Similarity=0.325  Sum_probs=107.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||++.+.     .+++.||||.++.... ...+.+.+|+.+                      
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  125 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM  125 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence            345666788999999999999987     3558999999986543 445678888887                      


Q ss_pred             -------------HHhhcC-----------------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCc
Q psy6828          95 -------------DIMENE-----------------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASN  138 (392)
Q Consensus        95 -------------~~l~~~-----------------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~N  138 (392)
                                   +++...                       ...+++.++..++.|++.||.|||++++ +||||||+|
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-vH~Dlkp~N  204 (343)
T 1luf_A          126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRN  204 (343)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGG
T ss_pred             EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCcce
Confidence                         333321                       1368999999999999999999999999 999999999


Q ss_pred             eEEcCCceEEEeccccchhcccccc-------------------------ccccccceeeeeee
Q psy6828         139 CLVDSRWVVKLADFGLTEFKRDAEY-------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       139 Ill~~~~~~kl~DFGla~~~~~~~~-------------------------~~~d~~s~g~~~~~  177 (392)
                      ||++.++.+||+|||+++.......                         ...|+||+|+++|+
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  268 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE  268 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHH
Confidence            9999999999999999976432211                         12388888888887

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.83  E-value=7.2e-21  Score=181.52  Aligned_cols=110  Identities=17%  Similarity=0.232  Sum_probs=87.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEee--------cCcEEEEEEcCCCChhHHHHHHHHHHH--------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIY--------KGRIFAIKRIPKKSVDITRAMKKELKI--------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..        .++.||+|.+.....     +.+|+.+                    
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~-----~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGR-----LFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTST-----HHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccch-----HHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3567778899999999999999887        488999999976532     2222221                    


Q ss_pred             ------------------------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828          95 ------------------------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS  143 (392)
Q Consensus        95 ------------------------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~  143 (392)
                                                    +++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-vH~Dikp~NIl~~~  194 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY-VHGNVTAENIFVDP  194 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC-BCSCCCGGGEEEET
T ss_pred             ccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCCHHHEEEcC
Confidence                                          333322 2469999999999999999999999999 99999999999999


Q ss_pred             Cc--eEEEeccccchhc
Q psy6828         144 RW--VVKLADFGLTEFK  158 (392)
Q Consensus       144 ~~--~~kl~DFGla~~~  158 (392)
                      ++  .+||+|||+++..
T Consensus       195 ~~~~~~kl~Dfg~a~~~  211 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRY  211 (352)
T ss_dssp             TEEEEEEECCGGGCBCS
T ss_pred             CCCceEEEecCcceeec
Confidence            98  8999999999754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.83  E-value=4.2e-21  Score=181.14  Aligned_cols=115  Identities=22%  Similarity=0.348  Sum_probs=99.2

Q ss_pred             eeeeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------   94 (392)
                      ..|...+.||+|+||.||++.    +..+++.||+|.+........+.+.+|+.+                         
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            345667889999999999998    456899999999987766667788888887                         


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                  +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dikp~NIli~~~~~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLP  196 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE-eccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence                        4444444469999999999999999999999999 999999999999999999999999997653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.83  E-value=6.7e-21  Score=183.85  Aligned_cols=133  Identities=17%  Similarity=0.176  Sum_probs=103.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||+|.+..+++.||||+++... ...+.+..|+.+                            
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            455777888999999999999999999999999997543 223444445443                            


Q ss_pred             ------------HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhc--CCcccccCCCCCceEEc--CCceEEEeccccchh
Q psy6828          95 ------------DIMENED-VKLDNMFIASLVADILRGMLYLHD--SALRYHGNLKASNCLVD--SRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ------------~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~--~~iiiHrDlKp~NIll~--~~~~~kl~DFGla~~  157 (392)
                                  +++.... ..+++..+..++.|++.||.|||+  .++ +||||||+|||++  .++.+||+|||+++.
T Consensus       132 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~i-vHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSI-IHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCE-ECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCE-EcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence                        3333222 358999999999999999999994  678 9999999999995  467899999999976


Q ss_pred             ccccc--------------------cccccccceeeeeee
Q psy6828         158 KRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                      .....                    ....|+||+|+++|+
T Consensus       211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  250 (382)
T 2vx3_A          211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVE  250 (382)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHH
Confidence            53321                    123389999999988

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=4.1e-21  Score=180.19  Aligned_cols=114  Identities=22%  Similarity=0.235  Sum_probs=96.6

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||||++........+.+.+|+.+                            
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            3557778889999999999999999999999999977666667788888887                            


Q ss_pred             -----------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                 +++..   ....+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++..
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY-AHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence                       22222   23469999999999999999999999999 9999999999999999999999998764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.83  E-value=5.7e-21  Score=183.43  Aligned_cols=114  Identities=18%  Similarity=0.237  Sum_probs=90.7

Q ss_pred             eeeeccCCCCCcceeEEEEEE-----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPI-----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------   94 (392)
                      ..|...+.||+|+||+||+|.     +..+++.||||.++.... .....+.+|+.+                       
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            446667889999999999999     556788999999975432 445567788776                       


Q ss_pred             ------------HHhhcCC------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccc
Q psy6828          95 ------------DIMENED------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFG  153 (392)
Q Consensus        95 ------------~~l~~~~------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFG  153 (392)
                                  +++....      ..+++.++..++.|++.||.|||++++ +||||||+|||++.++   .+||+|||
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChhhEEEecCCCCceEEECCCc
Confidence                        3333211      248999999999999999999999999 9999999999999555   59999999


Q ss_pred             cchhc
Q psy6828         154 LTEFK  158 (392)
Q Consensus       154 la~~~  158 (392)
                      +++..
T Consensus       230 ~a~~~  234 (367)
T 3l9p_A          230 MARDI  234 (367)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            99754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=2.7e-21  Score=182.65  Aligned_cols=135  Identities=21%  Similarity=0.279  Sum_probs=105.6

Q ss_pred             cceeeecc-CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSS-NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------   94 (392)
                      ...+|... +.||+|+||.||+|.+..+++.||+|++.+...  .....+.+|+.+                        
T Consensus        26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~  105 (327)
T 3lm5_A           26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII  105 (327)
T ss_dssp             HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence            45556554 889999999999999999999999999976432  334567777766                        


Q ss_pred             ------------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhc
Q psy6828          95 ------------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~  158 (392)
                                  +++. .....+++.++..++.|++.||.|||++++ +||||||+|||++.   ++.+||+|||+++..
T Consensus       106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~gi-vH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI-VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence                        2222 122369999999999999999999999999 99999999999987   789999999999764


Q ss_pred             cccc----------------------cccccccceeeeeee
Q psy6828         159 RDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ....                      ....|+||+|+++|+
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  225 (327)
T 3lm5_A          185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYM  225 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             CCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHH
Confidence            3321                      112388888888888

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.83  E-value=1.2e-20  Score=177.33  Aligned_cols=132  Identities=22%  Similarity=0.297  Sum_probs=104.7

Q ss_pred             ceee-eccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVS-LSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~-~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ..+| ...+.||+|+||.||++.    +..+++.||||++..... ...+.+.+|+.+                      
T Consensus        29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (318)
T 3lxp_A           29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA  108 (318)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred             cHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence            3344 668889999999997764    456889999999986543 456678888887                      


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     +++...  .+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          109 SLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             eEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCchheEEEcCCCCEEECCcccccccc
Confidence                           233222  48999999999999999999999999 999999999999999999999999997653


Q ss_pred             cccc--------------------------ccccccceeeeeee
Q psy6828         160 DAEY--------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~~--------------------------~~~d~~s~g~~~~~  177 (392)
                      ....                          ...|+||+|+++|+
T Consensus       186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  229 (318)
T 3lxp_A          186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE  229 (318)
T ss_dssp             TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHH
Confidence            3210                          12399999999988

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=5.9e-21  Score=176.14  Aligned_cols=133  Identities=25%  Similarity=0.233  Sum_probs=105.9

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||+|++.....  ...+.+.+|+.+                          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4456677789999999999999999999999999975433  445667788877                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccchhccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~~~~~~~  162 (392)
                               +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.   +||+|||++.......
T Consensus        85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  162 (284)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-CcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence                     112111 258999999999999999999999999 99999999999986655   9999999986543322


Q ss_pred             c----------------------ccccccceeeeeee
Q psy6828         163 Y----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~----------------------~~~d~~s~g~~~~~  177 (392)
                      .                      ...|+||+|+++|+
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  199 (284)
T 3kk8_A          163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI  199 (284)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHH
Confidence            1                      12488888888888

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.83  E-value=1.1e-20  Score=179.62  Aligned_cols=134  Identities=16%  Similarity=0.230  Sum_probs=105.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecC-cEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..++ +.||+|+++... ...+.+.+|+.+                          
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            3456777888999999999999988776 689999997542 334455556554                          


Q ss_pred             --------------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE------------------
Q psy6828          95 --------------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV------------------  141 (392)
Q Consensus        95 --------------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll------------------  141 (392)
                                    +++. .....+++.++..++.|++.||.|||++++ +||||||+|||+                  
T Consensus        96 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i-vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~  174 (355)
T 2eu9_A           96 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL-THTDLKPENILFVNSEFETLYNEHKSCEEK  174 (355)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred             eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEeccccccccccccccccc
Confidence                          2222 222369999999999999999999999999 999999999999                  


Q ss_pred             -cCCceEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828         142 -DSRWVVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       142 -~~~~~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                       +.++.+||+|||+++......                    ....|+||+|+++|+
T Consensus       175 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  231 (355)
T 2eu9_A          175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE  231 (355)
T ss_dssp             EESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHH
Confidence             567889999999997543221                    112399999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.83  E-value=3.6e-21  Score=188.08  Aligned_cols=116  Identities=22%  Similarity=0.327  Sum_probs=92.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH--------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI--------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~--------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++.+...        .....+.+|+.+                    
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  213 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED  213 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence            3456777889999999999999999999999999975432        112246677776                    


Q ss_pred             -----HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchhc
Q psy6828          95 -----DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~~  158 (392)
                           +++..        ....+++.++..++.|++.||.|||++++ +||||||+|||++.++   .+||+|||+++..
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI-IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCChHhEEEecCCCcceEEEeecccceec
Confidence                 22211        22369999999999999999999999999 9999999999997554   5999999999864


Q ss_pred             c
Q psy6828         159 R  159 (392)
Q Consensus       159 ~  159 (392)
                      .
T Consensus       293 ~  293 (419)
T 3i6u_A          293 G  293 (419)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.83  E-value=2e-21  Score=186.76  Aligned_cols=132  Identities=14%  Similarity=0.016  Sum_probs=97.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-HHhh--c-------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-DIME--N-------------------   99 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-~~l~--~-------------------   99 (392)
                      .|...+.||+|+||.||+|.+..+|+.||||++.....   ...+.+.+|+.+ ..+.  .                   
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence            36678899999999999999999999999999987553   334455555432 1111  0                   


Q ss_pred             --------------------------------------CCcCCCHHHH------HHHHHHHHHHHHHHhcCCcccccCCC
Q psy6828         100 --------------------------------------EDVKLDNMFI------ASLVADILRGMLYLHDSALRYHGNLK  135 (392)
Q Consensus       100 --------------------------------------~~~~l~~~~~------~~i~~qi~~~l~ylH~~~iiiHrDlK  135 (392)
                                                            .+..+++...      ..++.|++.||.|||++++ +|||||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i-vHrDik  221 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGL-VHGHFT  221 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE-EETTCS
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC-ccCcCC
Confidence                                                  0001233333      4666999999999999999 999999


Q ss_pred             CCceEEcCCceEEEeccccchhccccc----------------------cccccccceeeeeee
Q psy6828         136 ASNCLVDSRWVVKLADFGLTEFKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       136 p~NIll~~~~~~kl~DFGla~~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      |+|||++.++.+||+|||+++......                      ....|+||+|+++|+
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e  285 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR  285 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred             HHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence            999999999999999999997653322                      112378888888777

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.83  E-value=4.8e-21  Score=185.25  Aligned_cols=113  Identities=16%  Similarity=0.194  Sum_probs=96.4

Q ss_pred             ceeeeccCCCCCc--ceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------
Q psy6828          43 SQVSLSSNPDSDF--RYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------   94 (392)
                      ...|...+.||+|  +||.||++.+..+|+.||||+++....  ...+.+.+|+.+                        
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4557778899999  999999999999999999999975532  445677888887                        


Q ss_pred             -----------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -----------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -----------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                 +++... ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY-VHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEcccccce
Confidence                       333322 2369999999999999999999999999 999999999999999999999999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.83  E-value=7.2e-21  Score=176.02  Aligned_cols=133  Identities=19%  Similarity=0.259  Sum_probs=95.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||+|.+..... ........|...                            
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e   86 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME   86 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence            345566789999999999999999999999999976533 222223333322                            


Q ss_pred             -------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                             +++..   ....+++..+..++.|++.||.|||++ ++ +||||||+||+++.++.+||+|||+++...... 
T Consensus        87 ~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  165 (290)
T 3fme_A           87 LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV-IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA  165 (290)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC-CCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred             hhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe-ecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence                   22221   334699999999999999999999998 99 999999999999999999999999987532211 


Q ss_pred             -------------------------cccccccceeeeeee
Q psy6828         163 -------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------------~~~~d~~s~g~~~~~  177 (392)
                                               ....|+||+|+++|+
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~  205 (290)
T 3fme_A          166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE  205 (290)
T ss_dssp             ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHH
T ss_pred             ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHH
Confidence                                     112388999988888

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.83  E-value=2e-20  Score=176.42  Aligned_cols=132  Identities=26%  Similarity=0.331  Sum_probs=103.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEE--EEEEcCCCC-hhHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIF--AIKRIPKKS-VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~v--AiK~~~~~~-~~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.+  |+|.+.... ....+.+.+|+.+                           
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  105 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI  105 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence            3455678999999999999999999865  999987532 2344567778776                           


Q ss_pred             ---------HHhhcCC---------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828          95 ---------DIMENED---------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA  150 (392)
Q Consensus        95 ---------~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~  150 (392)
                               +++....               ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECGGGCEEEC
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCccceEEEcCCCeEEEc
Confidence                     3333221               358999999999999999999999999 999999999999999999999


Q ss_pred             ccccchhccccc----------------------cccccccceeeeeee
Q psy6828         151 DFGLTEFKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       151 DFGla~~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      |||+++......                      ....|+||+|+++|+
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  233 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  233 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             ccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHH
Confidence            999986422110                      112399999999998

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.83  E-value=2.5e-21  Score=192.80  Aligned_cols=135  Identities=19%  Similarity=0.242  Sum_probs=107.9

Q ss_pred             ccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------
Q psy6828          41 HTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------   94 (392)
Q Consensus        41 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------   94 (392)
                      .....|...+.||+|+||+||+|.+..+++.||||++.+...  ...+.+.+|+.+                        
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            345667788899999999999999999999999999864322  234667788877                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc---CCceEEEeccccchhccc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD---SRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~---~~~~~kl~DFGla~~~~~  160 (392)
                                 +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++   .++.+||+|||+++....
T Consensus        99 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             EEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence                       222211 268999999999999999999999999 9999999999995   456799999999975432


Q ss_pred             ccc---------------------ccccccceeeeeee
Q psy6828         161 AEY---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~~~---------------------~~~d~~s~g~~~~~  177 (392)
                      ...                     ...|+||+|+++|+
T Consensus       177 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~  214 (486)
T 3mwu_A          177 NTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYI  214 (486)
T ss_dssp             C----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHH
Confidence            211                     12399999999999

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.82  E-value=1.8e-20  Score=177.08  Aligned_cols=133  Identities=18%  Similarity=0.255  Sum_probs=104.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCc-----EEEEEEcCCCCh-hHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGR-----IFAIKRIPKKSV-DITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~~~-~~~~~~~~E~~~-----------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++     .||+|.+..... ...+.+.+|+.+                       
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  125 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV  125 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence            345667889999999999999876554     899999976543 445667788776                       


Q ss_pred             -------------HHhhcC-------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEE
Q psy6828          95 -------------DIMENE-------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK  148 (392)
Q Consensus        95 -------------~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~k  148 (392)
                                   +++...             ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+|
T Consensus       126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~k  204 (333)
T 2i1m_A          126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC-IHRDVAARNVLLTNGHVAK  204 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGCEEEGGGEEE
T ss_pred             EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCc-ccCCcccceEEECCCCeEE
Confidence                         222211             2247899999999999999999999999 9999999999999999999


Q ss_pred             Eeccccchhcccccc-------------------------ccccccceeeeeee
Q psy6828         149 LADFGLTEFKRDAEY-------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       149 l~DFGla~~~~~~~~-------------------------~~~d~~s~g~~~~~  177 (392)
                      |+|||+++.......                         ...|+||+|+++|+
T Consensus       205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  258 (333)
T 2i1m_A          205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE  258 (333)
T ss_dssp             BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHH
Confidence            999999975432211                         12388889888888

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.82  E-value=5.6e-21  Score=181.06  Aligned_cols=134  Identities=21%  Similarity=0.230  Sum_probs=108.9

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~------------------------   94 (392)
                      ....|...+.||+|+||.||++.+..+++.||+|.+.+..   ....+.+.+|+.+                        
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4566778889999999999999999999999999987543   2455678888877                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                 +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... 
T Consensus       119 v~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          119 VLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             EECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-EecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence                       222222 258999999999999999999999999 999999999999999999999999997643211 


Q ss_pred             ----------------------cccccccceeeeeee
Q psy6828         163 ----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------------~~~~d~~s~g~~~~~  177 (392)
                                            ....|+||+|+++|+
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  233 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT  233 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHH
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence                                  112388888888887

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.82  E-value=1.4e-20  Score=177.60  Aligned_cols=134  Identities=19%  Similarity=0.217  Sum_probs=105.4

Q ss_pred             cceeeeccCCCCCcceeEEEEEEE-eecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIG-IYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+ ..+++.||||+++... ...+.+.+|+.+                          
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            455677788899999999999998 5678999999997543 334556666655                          


Q ss_pred             --------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC----------------
Q psy6828          95 --------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS----------------  143 (392)
Q Consensus        95 --------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~----------------  143 (392)
                                    +++.. ....+++.++..++.|++.||.|||++++ +||||||+|||++.                
T Consensus        91 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           91 HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL-THTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC-cCCCCCHHHEEEeccccccccCCccccccc
Confidence                          23322 22358999999999999999999999999 99999999999987                


Q ss_pred             ---CceEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828         144 ---RWVVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       144 ---~~~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                         ++.+||+|||+++......                    ....|+||+|+++|+
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  226 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE  226 (339)
T ss_dssp             EESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHH
T ss_pred             cccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHH
Confidence               6679999999987543221                    112399999999988

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.82  E-value=4.4e-21  Score=176.76  Aligned_cols=131  Identities=19%  Similarity=0.285  Sum_probs=104.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|++.+...   .....+.+|+.+                           
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   89 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence            35667789999999999999999999999999865432   224567777776                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......    
T Consensus        90 ~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i-~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (279)
T 3fdn_A           90 YAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL  167 (279)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTC-EECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecccCChHhEEEcCCCCEEEEeccccccCCccccccc
Confidence                    222222 258999999999999999999999999 999999999999999999999999886432211    


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  199 (279)
T 3fdn_A          168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE  199 (279)
T ss_dssp             CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             CCCCCccCHhHhccCCCCccchhHhHHHHHHH
Confidence                             123489999999888

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.82  E-value=2.5e-20  Score=173.72  Aligned_cols=132  Identities=27%  Similarity=0.383  Sum_probs=109.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||.+..... ...+.+.+|+.+                           
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            4456677889999999999999999999999999975542 345677888776                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++..  ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......    
T Consensus       101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  177 (303)
T 3a7i_A          101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN  177 (303)
T ss_dssp             CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred             eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence                    34433  268999999999999999999999999 999999999999999999999999986543211    


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||+|+++|+
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  211 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE  211 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence                               112399999999999

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=6.8e-21  Score=176.80  Aligned_cols=116  Identities=22%  Similarity=0.281  Sum_probs=98.3

Q ss_pred             ccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH-----------------------
Q psy6828          41 HTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI-----------------------   94 (392)
Q Consensus        41 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~-----------------------   94 (392)
                      .....|...+.||+|+||.||++.+..+++.||+|.+.+..   ....+.+.+|+.+                       
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            34566778889999999999999999999999999986543   2455677888877                       


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                  +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus        92 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCChHhEEEcCCCCEEEEeccCceec
Confidence                        222222 258999999999999999999999999 99999999999999999999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.82  E-value=9.3e-21  Score=186.98  Aligned_cols=130  Identities=24%  Similarity=0.271  Sum_probs=101.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .+...+.||+|+||.||+|.+. .+..||||.++..... .+.+.+|+.+                              
T Consensus       185 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~  262 (452)
T 1fmk_A          185 SLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK  262 (452)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcC
Confidence            3455678999999999999865 3567999999865433 4568888887                              


Q ss_pred             ----HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828          95 ----DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------  162 (392)
Q Consensus        95 ----~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------  162 (392)
                          +++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......       
T Consensus       263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~  341 (452)
T 1fmk_A          263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  341 (452)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChhhEEECCCCCEEECCCccceecCCCceecccCC
Confidence                333321 1248999999999999999999999999 999999999999999999999999998653221       


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||||+++|+
T Consensus       342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e  373 (452)
T 1fmk_A          342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  373 (452)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccCHhHHhcCCCCccccHHhHHHHHHH
Confidence                             112399999999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.82  E-value=8.1e-21  Score=184.10  Aligned_cols=130  Identities=21%  Similarity=0.272  Sum_probs=98.3

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||+||+|.+..+++ ||+|++.+....    ..+|+.+                           
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            34567788899999999999999766555 888887544321    1134433                           


Q ss_pred             -----HHh-----------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEeccccchh
Q psy6828          95 -----DIM-----------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----~~l-----------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DFGla~~  157 (392)
                           +++           ......+++..+..++.|++.||.|||++++ +||||||+|||++ .++.+||+|||+++.
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI-CHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-cCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence                 010           1123368999999999999999999999999 9999999999999 789999999999975


Q ss_pred             ccccc-----------------------cccccccceeeeeee
Q psy6828         158 KRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      .....                       ....|+||+|+++|+
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  234 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE  234 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            42211                       112388888888888

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.82  E-value=2.1e-20  Score=173.18  Aligned_cols=132  Identities=17%  Similarity=0.239  Sum_probs=106.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..++..||+|.+.....  ...+.+.+|+.+                           
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            445566789999999999999999999999999975433  445678888887                           


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEc-CCceEEEeccccchhcc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVD-SRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~-~~~~~kl~DFGla~~~~  159 (392)
                                  +++... ..+++..+..++.|++.||.|||+++  + +||||||+|||++ .++.+||+|||++....
T Consensus       106 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i-~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCC-CCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCE-EECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence                        222221 25899999999999999999999999  8 9999999999997 78999999999997543


Q ss_pred             ccc--------------------cccccccceeeeeee
Q psy6828         160 DAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                    ....|+||+|+++|+
T Consensus       184 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~  221 (290)
T 1t4h_A          184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLE  221 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHH
T ss_pred             ccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHH
Confidence            221                    112388888888888

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=7.4e-21  Score=180.90  Aligned_cols=133  Identities=21%  Similarity=0.177  Sum_probs=100.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHH--HHHHH-HH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA--MKKEL-KI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~--~~~E~-~~-------------------------   94 (392)
                      ...|...+.||+|+||+||+|.++.+|+.||||++++......++  ..... ..                         
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            445666778999999999999999999999999997654322111  11111 11                         


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----ceEEEeccccchhcccccc---
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----WVVKLADFGLTEFKRDAEY---  163 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~DFGla~~~~~~~~---  163 (392)
                          +++... ..+++.++..++.|++.||.|||++++ +||||||+|||+.++    +.+||+|||+++.......   
T Consensus       101 g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~gi-vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  178 (342)
T 2qr7_A          101 GELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGV-VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM  178 (342)
T ss_dssp             CBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBC
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCcee
Confidence                233222 269999999999999999999999999 999999999998543    3599999999986533211   


Q ss_pred             --------------------ccccccceeeeeee
Q psy6828         164 --------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 --------------------~~~d~~s~g~~~~~  177 (392)
                                          ...|+||+|+++|+
T Consensus       179 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  212 (342)
T 2qr7_A          179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT  212 (342)
T ss_dssp             CSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCccccCHHHhcCCCCCCccCeeeHhHHHHH
Confidence                                12399999999998

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=1.3e-20  Score=188.50  Aligned_cols=134  Identities=22%  Similarity=0.290  Sum_probs=106.0

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-------------hHHHHHHHHHHH--------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-------------DITRAMKKELKI--------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------------~~~~~~~~E~~~--------------   94 (392)
                      ....|...+.||+|+||+||+|.+..+++.||+|++.+...             ...+.+.+|+.+              
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            45567778899999999999999999999999999976432             224567888887              


Q ss_pred             ---------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEe
Q psy6828          95 ---------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLA  150 (392)
Q Consensus        95 ---------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~  150 (392)
                                           +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++   .+||+
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHNI-VHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCcHHHEEEecCCCCccEEEE
Confidence                                 222222 258999999999999999999999999 9999999999998776   69999


Q ss_pred             ccccchhccccc---------------------cccccccceeeeeee
Q psy6828         151 DFGLTEFKRDAE---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       151 DFGla~~~~~~~---------------------~~~~d~~s~g~~~~~  177 (392)
                      |||+++......                     ....|+||+|+++|+
T Consensus       192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~  239 (504)
T 3q5i_A          192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYI  239 (504)
T ss_dssp             CCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHH
T ss_pred             ECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHH
Confidence            999997643321                     123499999999999

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.82  E-value=1.5e-20  Score=173.35  Aligned_cols=133  Identities=18%  Similarity=0.238  Sum_probs=103.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||+|.+.....  .....+.+|+..                           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            345667789999999999999999999999999976432  344556666655                           


Q ss_pred             ---------HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC------------------
Q psy6828          95 ---------DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR------------------  144 (392)
Q Consensus        95 ---------~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~------------------  144 (392)
                               +++...   ...+++.++..++.|++.||.|||++++ +||||||+|||++.+                  
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL-VHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEC--------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCE-eecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence                     233221   1258999999999999999999999999 999999999999844                  


Q ss_pred             -ceEEEeccccchhcccccc--------------------ccccccceeeeeee
Q psy6828         145 -WVVKLADFGLTEFKRDAEY--------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       145 -~~~kl~DFGla~~~~~~~~--------------------~~~d~~s~g~~~~~  177 (392)
                       ..+||+|||++........                    ...|+||+|+++|+
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~  223 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVC  223 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHH
Confidence             4799999999876533211                    23489999999888

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.82  E-value=3.2e-21  Score=181.93  Aligned_cols=132  Identities=22%  Similarity=0.276  Sum_probs=101.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcE----EEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRI----FAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.    ||+|.+..... ...+.+.+|+.+                         
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~   93 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT   93 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEE
Confidence            355567899999999999998888875    78888754321 222233444443                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  172 (325)
T 3kex_A           94 QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM-VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL  172 (325)
T ss_dssp             ECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC-CCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred             EeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC-CCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence                     4444444479999999999999999999999999 9999999999999999999999999986533211  


Q ss_pred             -----------------------ccccccceeeeeee
Q psy6828         164 -----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -----------------------~~~d~~s~g~~~~~  177 (392)
                                             ...|+||+|+++|+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  209 (325)
T 3kex_A          173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE  209 (325)
T ss_dssp             C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHH
Confidence                                   12388899988887

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.82  E-value=5.8e-21  Score=182.65  Aligned_cols=133  Identities=18%  Similarity=0.230  Sum_probs=103.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----------hHHHHHHHHHHH-----------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----------DITRAMKKELKI-----------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------~~~~~~~~E~~~-----------------   94 (392)
                      ...|...+.||+|+||.||++.+. +|+.||||++.....           ...+.+.+|+.+                 
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            455677788999999999999865 499999999864321           224678888877                 


Q ss_pred             ----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 ----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 ----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                                            +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+||
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGV-VHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCT
T ss_pred             eccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcC-EecCCChHHEEEcCCCCEEEEec
Confidence                                  3333444469999999999999999999999999 99999999999999999999999


Q ss_pred             ccchhccccc-----------------------cccccccceeeeeee
Q psy6828         153 GLTEFKRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       153 Gla~~~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      |+++......                       ....|+||+|+++|+
T Consensus       179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  226 (362)
T 3pg1_A          179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE  226 (362)
T ss_dssp             TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHH
Confidence            9997432111                       112489999999998

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.9e-21  Score=185.92  Aligned_cols=113  Identities=21%  Similarity=0.278  Sum_probs=88.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~----------------------   94 (392)
                      ..|...+.||+|+||.||++.+.   .+++.||||++++...    ...+.+.+|+.+                      
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            34666788999999999999974   4789999999864321    111122222222                      


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                    +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             EEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence                          233222 258999999999999999999999999 99999999999999999999999998753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.82  E-value=1.2e-20  Score=181.05  Aligned_cols=114  Identities=23%  Similarity=0.331  Sum_probs=93.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~---------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||+++....        ...+.+.+|+.+                     
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            456667899999999999999988999999999865431        123456667665                     


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     +++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi-~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~  251 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNI-VHRDLKPENILLDDNMQIRLSDFGFSCHLE  251 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence                           222221 258999999999999999999999999 999999999999999999999999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.82  E-value=3.4e-21  Score=180.40  Aligned_cols=134  Identities=19%  Similarity=0.206  Sum_probs=100.9

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------HHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------ITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------~~~~~~~E~~~---------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||.++.....      ....+.+|+.+                     
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~  108 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE  108 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence            345677788899999999999999899999999999754321      11112223222                     


Q ss_pred             -------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEecccc
Q psy6828          95 -------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADFGL  154 (392)
Q Consensus        95 -------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DFGl  154 (392)
                                         +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++ .++.+||+|||+
T Consensus       109 ~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~kl~dfg~  186 (312)
T 2iwi_A          109 TQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSRGV-VHRDIKDENILIDLRRGCAKLIDFGS  186 (312)
T ss_dssp             ----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHTE-ECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred             cCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCChhhEEEeCCCCeEEEEEcch
Confidence                               223222 258999999999999999999999999 9999999999999 789999999999


Q ss_pred             chhcccccc----------------------ccccccceeeeeee
Q psy6828         155 TEFKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       155 a~~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      ++.......                      ...|+||+|+++|+
T Consensus       187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  231 (312)
T 2iwi_A          187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD  231 (312)
T ss_dssp             CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHH
Confidence            876433211                      13489999999988

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=7.3e-21  Score=189.85  Aligned_cols=135  Identities=22%  Similarity=0.297  Sum_probs=104.1

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------   94 (392)
                      ....|...+.||+|+||+||+|.+..+++.||+|++.+...  ...+.+.+|+.+                         
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            34567778899999999999999999999999999976543  234667888887                         


Q ss_pred             -HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccccc
Q psy6828          95 -DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 -~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~  162 (392)
                       +++..+        ...+++..+..++.|++.||.|||++++ +||||||+|||++..   +.+||+|||+++......
T Consensus       115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI-VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence             221111        1258999999999999999999999999 999999999999764   559999999987653321


Q ss_pred             c---------------------ccccccceeeeeee
Q psy6828         163 Y---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~---------------------~~~d~~s~g~~~~~  177 (392)
                      .                     ...|+||+|+++|+
T Consensus       194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~  229 (494)
T 3lij_A          194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFI  229 (494)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHH
T ss_pred             cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHH
Confidence            1                     23499999999999

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.82  E-value=5.2e-21  Score=179.19  Aligned_cols=132  Identities=17%  Similarity=0.169  Sum_probs=104.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|++.....   ...+.+.+|+.+                          
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            346677889999999999999999999999999975432   334678888877                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......   
T Consensus       114 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  191 (309)
T 2h34_A          114 RLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAGA-THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ  191 (309)
T ss_dssp             ECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCcC-CcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence                     333322 259999999999999999999999999 999999999999999999999999986543211   


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  227 (309)
T 2h34_A          192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYE  227 (309)
T ss_dssp             -----CCGGGCCGGGTCC----CCCHHHHHHHHHHH
T ss_pred             ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHH
Confidence                                 113488888888888

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.82  E-value=1.2e-20  Score=175.04  Aligned_cols=127  Identities=9%  Similarity=-0.038  Sum_probs=106.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      ..+|...+.||+|+||.||+|.+..+++.||||++.....   ...+.+.+|...                         
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3557777899999999999999999999999999986543   344667788776                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT  164 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~  164 (392)
                                +++++   .....++..++.|++.||.|||++++ +||||||+|||++.++.+||+++|...    ....
T Consensus       110 ~e~~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~gi-vH~Dikp~NIll~~~g~~kl~~~~~~~----~~~~  181 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRAGV-ALSIDHPSRVRVSIDGDVVLAYPATMP----DANP  181 (286)
T ss_dssp             EECCCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEEETTSCEEECSCCCCT----TCCH
T ss_pred             EEecCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCC-ccCCCCcccEEEcCCCCEEEEeccccC----CCCc
Confidence                      44433   24667889999999999999999999 999999999999999999999887653    2345


Q ss_pred             cccccceeeeeee
Q psy6828         165 GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ~~d~~s~g~~~~~  177 (392)
                      ..|+||+|+++|+
T Consensus       182 ~~Di~slG~il~e  194 (286)
T 3uqc_A          182 QDDIRGIGASLYA  194 (286)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH
Confidence            6799999999999

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.82  E-value=3.5e-20  Score=169.72  Aligned_cols=127  Identities=22%  Similarity=0.327  Sum_probs=94.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~---------------------------   94 (392)
                      |...+.||+|+||.||++.+  +++.||||++.....    ...+.+.+|+.+                           
T Consensus         9 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            9 LTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             eeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            45566799999999999985  489999999975433    224567777776                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC---cccccCCCCCceEEcC--------CceEEEeccccc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA---LRYHGNLKASNCLVDS--------RWVVKLADFGLT  155 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~---iiiHrDlKp~NIll~~--------~~~~kl~DFGla  155 (392)
                              +++.+  ..+++..+..++.|++.||.|||+++   + +||||||+|||++.        ++.+||+|||++
T Consensus        87 ~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i-~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~  163 (271)
T 3dtc_A           87 FARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPI-IHRDLKSSNILILQKVENGDLSNKILKITDFGLA  163 (271)
T ss_dssp             CCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCC-CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred             cCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCce-eecCCchHHEEEecccccccccCcceEEccCCcc
Confidence                    33332  36999999999999999999999999   6 99999999999986        678999999999


Q ss_pred             hhccccc---------------------cccccccceeeeeee
Q psy6828         156 EFKRDAE---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       156 ~~~~~~~---------------------~~~~d~~s~g~~~~~  177 (392)
                      +......                     ....|+||+|+++|+
T Consensus       164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  206 (271)
T 3dtc_A          164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWE  206 (271)
T ss_dssp             ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHH
Confidence            7543221                     112389999999888

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.82  E-value=5.6e-20  Score=168.06  Aligned_cols=130  Identities=13%  Similarity=0.162  Sum_probs=103.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      .|...+.||+|+||.||+|.+  +++.||+|.+.....  ...+.+.+|+.+                            
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            345567899999999999986  489999999986543  445678888877                            


Q ss_pred             ---------HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828          95 ---------DIMENEDV-KLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  162 (392)
                               +++..... .+++.++..++.|++.||.|||+++  + +||||||+||+++.++.++++|||++.......
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i-~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~  167 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLI-PRHALNSRSVMIDEDMTARISMADVKFSFQSPG  167 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCC-TTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence                     44443322 4899999999999999999999999  8 999999999999999999999888764322111


Q ss_pred             ------------------cc---cccccceeeeeee
Q psy6828         163 ------------------YT---GTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~---~~d~~s~g~~~~~  177 (392)
                                        ..   ..|+||+|+++|+
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  203 (271)
T 3kmu_A          168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWE  203 (271)
T ss_dssp             CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHH
T ss_pred             ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHH
Confidence                              11   3599999999998

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.82  E-value=7.9e-21  Score=177.30  Aligned_cols=115  Identities=20%  Similarity=0.340  Sum_probs=93.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+|+.||+|.+........+.+.+|+.+                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            3456667789999999999999999999999999986654445667788777                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE---cCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV---DSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll---~~~~~~kl~DFGla~~~~  159 (392)
                             +++... ..+++..+..++.|++.||.|||++++ +||||||+||++   +.++.+||+|||+++...
T Consensus        88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHENGI-VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence                   222222 258999999999999999999999999 999999999999   778899999999987543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.81  E-value=2.1e-20  Score=172.91  Aligned_cols=133  Identities=18%  Similarity=0.210  Sum_probs=97.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeec-Cc--EEEEEEcCCCCh---hHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYK-GR--IFAIKRIPKKSV---DITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~--~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+ ++  .||+|+++....   ...+.+.+|+.+                       
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            3466677899999999999986543 33  699999976532   445677888877                       


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                                 +++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...... 
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  176 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD  176 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCchheEEEcCCCCEEEcccccccccccccc
Confidence                       3333333469999999999999999999999999 999999999999999999999999987643221 


Q ss_pred             -------------------------cccccccceeeeeee
Q psy6828         163 -------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------------~~~~d~~s~g~~~~~  177 (392)
                                               ....|+||+|+++|+
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  216 (291)
T 1u46_A          177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE  216 (291)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHH
Confidence                                     112399999999998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=1.2e-20  Score=189.99  Aligned_cols=129  Identities=24%  Similarity=0.276  Sum_probs=103.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||.||+|.+. .+..||||+++..... .+.+.+|+.+                               
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~g  346 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG  346 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTE
T ss_pred             hhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCC
Confidence            455678999999999999865 3567999999865433 4568888887                               


Q ss_pred             ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828          95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------  162 (392)
Q Consensus        95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------  162 (392)
                         +++... ...+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......        
T Consensus       347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  425 (535)
T 2h8h_A          347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK  425 (535)
T ss_dssp             EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTT
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCc
Confidence               333321 1248999999999999999999999999 999999999999999999999999998653211        


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||||+++|+
T Consensus       426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~e  456 (535)
T 2h8h_A          426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTE  456 (535)
T ss_dssp             SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CcccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence                            112399999999998

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.81  E-value=1.1e-20  Score=175.62  Aligned_cols=113  Identities=21%  Similarity=0.327  Sum_probs=94.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||+|.+..+++.||||.+... ....+.+.+|+.+                              
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            455667899999999999999999999999999643 3445667788776                              


Q ss_pred             ------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 ------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 ------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                        +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~  164 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI-IHRDLKPMNIFIDESRNVKIGDFGLAK  164 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCe-ecccCCHHhEEEcCCCCEEEeeCcchh
Confidence                              2222233357888999999999999999999999 999999999999999999999999987


Q ss_pred             hcc
Q psy6828         157 FKR  159 (392)
Q Consensus       157 ~~~  159 (392)
                      ...
T Consensus       165 ~~~  167 (303)
T 1zy4_A          165 NVH  167 (303)
T ss_dssp             CTT
T ss_pred             hcc
Confidence            653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.81  E-value=1.3e-20  Score=174.09  Aligned_cols=131  Identities=17%  Similarity=0.266  Sum_probs=105.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+.+...   ...+.+.+|+.+                           
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            45567789999999999999999999999999965422   223567778776                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                              +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......    
T Consensus        95 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  172 (284)
T 2vgo_A           95 FAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKV-IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTM  172 (284)
T ss_dssp             CCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCC
T ss_pred             eCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCHHHEEEcCCCCEEEecccccccCcccccccc
Confidence                    233222 258999999999999999999999999 999999999999999999999999886433211    


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ....|+||+|+++|+
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  204 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE  204 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred             cCCCCcCCHHHhccCCCCcccchhhHHHHHHH
Confidence                             123489999998888

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.81  E-value=2e-20  Score=176.91  Aligned_cols=106  Identities=24%  Similarity=0.280  Sum_probs=85.0

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||.||+|.  .+++.||||++.....   ..+..|..+                              
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~--~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGS--LDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEE--ETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HhheeeecccCCCeEEEEEE--ECCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            35566789999999999995  4799999999964432   233334333                              


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC---------CcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDS---------ALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~---------~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                                  +++...  ..++..+..++.|++.||.|||++         ++ +||||||+|||++.++.+||+|||
T Consensus        89 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~i-vH~Dikp~Nill~~~~~~kL~DFG  165 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI-SHRDLNSRNVLVKNDGTCVISDFG  165 (336)
T ss_dssp             EEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCE-ECSSCSGGGEEECTTSCEEECCCT
T ss_pred             EEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccce-eecccccceEEEcCCCcEEEeecc
Confidence                        222222  368889999999999999999999         99 999999999999999999999999


Q ss_pred             cchhc
Q psy6828         154 LTEFK  158 (392)
Q Consensus       154 la~~~  158 (392)
                      +++..
T Consensus       166 ~a~~~  170 (336)
T 3g2f_A          166 LSMRL  170 (336)
T ss_dssp             TCEEC
T ss_pred             ceeec
Confidence            99754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.81  E-value=2.9e-20  Score=172.73  Aligned_cols=132  Identities=23%  Similarity=0.207  Sum_probs=105.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---------hHHHHHHHHHHH--------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---------DITRAMKKELKI--------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~~E~~~--------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||.++....         ...+.+.+|+.+                    
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence            446667789999999999999999999999999975431         234556677665                    


Q ss_pred             ----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                      +++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  174 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQL  174 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcceEEEcCCCcEEEecccchhhc
Confidence                            333222 258999999999999999999999999 99999999999999999999999998754


Q ss_pred             cccc----------------------------cccccccceeeeeee
Q psy6828         159 RDAE----------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~----------------------------~~~~d~~s~g~~~~~  177 (392)
                      ....                            ....|+||+|+++|+
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence            3211                            113488999988888

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=2e-20  Score=179.44  Aligned_cols=134  Identities=18%  Similarity=0.292  Sum_probs=103.6

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------   94 (392)
                      ....|...+.||+|+||.||+|.+..+++.||||++..... ..+.+.+|+.+                           
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            34567778899999999999999999999999999975432 23334444433                           


Q ss_pred             ----------------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEc------CC
Q psy6828          95 ----------------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVD------SR  144 (392)
Q Consensus        95 ----------------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~------~~  144 (392)
                                            +++.. ....+++..+..++.||+.||.|||++ ++ +||||||+|||++      ..
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~i-vH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI-IHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE-ECSCCSGGGEEEEEEETTTTE
T ss_pred             hccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCE-EecCCChHHeEEeccCCCcCc
Confidence                                  22222 223599999999999999999999998 99 9999999999994      44


Q ss_pred             ceEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828         145 WVVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       145 ~~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~  177 (392)
                      +.+||+|||+++......                    ....|+||+|+++|+
T Consensus       175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e  227 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFE  227 (373)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHH
T ss_pred             ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHH
Confidence            589999999997543321                    112389999999998

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.81  E-value=1.1e-20  Score=177.93  Aligned_cols=132  Identities=20%  Similarity=0.258  Sum_probs=102.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~---------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+++.||||.+.+...        .....+.+|+.+                     
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   89 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY   89 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence            446667789999999999999999999999999976432        122346677776                     


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccchhc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTEFK  158 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~~~  158 (392)
                                   +++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.   +||+|||+++..
T Consensus        90 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A           90 YIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGI-IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  167 (322)
T ss_dssp             EEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence                         33332 2369999999999999999999999999 99999999999987654   999999998754


Q ss_pred             cccc-------------------------cccccccceeeeeee
Q psy6828         159 RDAE-------------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~-------------------------~~~~d~~s~g~~~~~  177 (392)
                      ....                         ....|+||+|+++|+
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~  211 (322)
T 2ycf_A          168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  211 (322)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHH
T ss_pred             ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHH
Confidence            3211                         123489999999988

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=3e-20  Score=171.31  Aligned_cols=131  Identities=21%  Similarity=0.252  Sum_probs=105.2

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+.....      ...+.+.+|+.+                        
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            45666789999999999999999999999999875432      135678888877                        


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----eEEEeccccchhcc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~~~~  159 (392)
                                 +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++    .+||+|||++....
T Consensus        86 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           86 ILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRI-AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-cCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence                       333322 258999999999999999999999999 9999999999998877    79999999987543


Q ss_pred             ccc----------------------cccccccceeeeeee
Q psy6828         160 DAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ...                      ....|+||+|+++|+
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  203 (283)
T 3bhy_A          164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  203 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHH
Confidence            211                      113489999998888

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.81  E-value=1.2e-20  Score=173.24  Aligned_cols=132  Identities=23%  Similarity=0.304  Sum_probs=105.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||||.+.....   ...+.+.+|+.+                          
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            345667789999999999999988999999999965432   234567778776                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......   
T Consensus        91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  168 (276)
T 2h6d_A           91 EYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRHMV-VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR  168 (276)
T ss_dssp             ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHCS-SCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred             eccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence                     333222 258999999999999999999999999 999999999999999999999999987643221   


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  203 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA  203 (276)
T ss_dssp             --------CCTGGGTTSCCCHHHHHHHHHHHHHHH
T ss_pred             cccCCccccCHHHHcCCCCCCccchHHHHHHHHHH
Confidence                                123488888888887

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.81  E-value=4.9e-20  Score=169.61  Aligned_cols=129  Identities=22%  Similarity=0.273  Sum_probs=98.5

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+  +|+.||+|.++...  ..+.+.+|+.+                             
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            3456677899999999999965  58999999997653  34567788877                             


Q ss_pred             -------HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828          95 -------DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 -------~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----  162 (392)
                             +++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......    
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  175 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  175 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence                   2222111 127889999999999999999999999 999999999999999999999999987543211    


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  206 (278)
T 1byg_A          176 LPVKWTAPEALREKKFSTKSDVWSFGILLWE  206 (278)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHhCCCCCCchhcHHHHHHHHHH
Confidence                            123499999999998

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.81  E-value=1.1e-20  Score=174.22  Aligned_cols=111  Identities=24%  Similarity=0.362  Sum_probs=90.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+.....    .+.+|+.+                             
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            345667789999999999999988999999999976543    23344444                             


Q ss_pred             ----------------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828          95 ----------------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD  151 (392)
Q Consensus        95 ----------------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D  151 (392)
                                            +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~D  165 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL-INRDLKPSNIFLVDTKQVKIGD  165 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECC
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCCHHHEEEcCCCCEEECc
Confidence                                  22211 12358999999999999999999999999 9999999999999999999999


Q ss_pred             cccchhcc
Q psy6828         152 FGLTEFKR  159 (392)
Q Consensus       152 FGla~~~~  159 (392)
                      ||+++...
T Consensus       166 fg~~~~~~  173 (284)
T 2a19_B          166 FGLVTSLK  173 (284)
T ss_dssp             CTTCEESS
T ss_pred             chhheecc
Confidence            99987654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.81  E-value=2.2e-20  Score=175.87  Aligned_cols=155  Identities=21%  Similarity=0.212  Sum_probs=107.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------HH--------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------DI--------------   96 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------~~--------------   96 (392)
                      .|...+.||+|+||.||+|.+..+|+.||||+++.... ...+.+.+|+.+             ++              
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~   86 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD   86 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence            35556789999999999999999999999999975433 355678888876             00              


Q ss_pred             -----------------------------------------------------------------hhc--CCcCCCHHHH
Q psy6828          97 -----------------------------------------------------------------MEN--EDVKLDNMFI  109 (392)
Q Consensus        97 -----------------------------------------------------------------l~~--~~~~l~~~~~  109 (392)
                                                                                       +..  .....++..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  166 (332)
T 3qd2_B           87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC  166 (332)
T ss_dssp             C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred             hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence                                                                             000  0012455568


Q ss_pred             HHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc----------cccccceeeeeeecc
Q psy6828         110 ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT----------GTDQHSFLQHTYHVN  179 (392)
Q Consensus       110 ~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~----------~~d~~s~g~~~~~~~  179 (392)
                      ..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++........          .......|...|.+|
T Consensus       167 ~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHHHHhCCe-eecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence            8999999999999999999 99999999999999999999999999876543211          011122345555544


Q ss_pred             C----CCCcccccccccchhhhccC
Q psy6828         180 R----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       180 ~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      +    ..++.+.|.|+.+.++..++
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~  270 (332)
T 3qd2_B          246 EQIHGNNYSHKVDIFSLGLILFELL  270 (332)
T ss_dssp             HHHHCCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHH
Confidence            4    23344555566555555544

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=1.7e-20  Score=175.61  Aligned_cols=114  Identities=30%  Similarity=0.414  Sum_probs=91.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||+|.+.....  .+.+.+|+.+                            
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC--CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH--HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            4556677889999999999999999999999999976532  3456777776                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus       106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  176 (314)
T 3com_A          106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKAGNILLNTEGHAKLADFGVAGQLT  176 (314)
T ss_dssp             CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence                   4444334469999999999999999999999999 999999999999999999999999987543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=8.1e-21  Score=180.30  Aligned_cols=115  Identities=22%  Similarity=0.326  Sum_probs=93.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-----hhHHHHHHHHHHH-----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-----VDITRAMKKELKI-----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~E~~~-----------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||+|++.+..     ....+.+.+|+.+                       
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            456777889999999999999999999999999986542     2445678888887                       


Q ss_pred             ---HHhhcC------------------------------------------------CcCCCHHHHHHHHHHHHHHHHHH
Q psy6828          95 ---DIMENE------------------------------------------------DVKLDNMFIASLVADILRGMLYL  123 (392)
Q Consensus        95 ---~~l~~~------------------------------------------------~~~l~~~~~~~i~~qi~~~l~yl  123 (392)
                         +++..+                                                ...+++..+..++.|++.||.||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence               221111                                                11236778889999999999999


Q ss_pred             hcCCcccccCCCCCceEEcCCc--eEEEeccccchhc
Q psy6828         124 HDSALRYHGNLKASNCLVDSRW--VVKLADFGLTEFK  158 (392)
Q Consensus       124 H~~~iiiHrDlKp~NIll~~~~--~~kl~DFGla~~~  158 (392)
                      |++++ +||||||+|||++.++  .+||+|||+++..
T Consensus       185 H~~~i-vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~  220 (345)
T 3hko_A          185 HNQGI-CHRDIKPENFLFSTNKSFEIKLVDFGLSKEF  220 (345)
T ss_dssp             HHTTE-ECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred             HHCCc-cccCCChhhEEEecCCCceEEEeeccccccc
Confidence            99999 9999999999998776  8999999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.81  E-value=3.6e-20  Score=174.08  Aligned_cols=115  Identities=19%  Similarity=0.276  Sum_probs=95.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||+|.+.     .+++.||+|.+..... .....+.+|+.+                      
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            455777888999999999999877     4678999999976543 445568888887                      


Q ss_pred             -------------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828          95 -------------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF  152 (392)
Q Consensus        95 -------------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF  152 (392)
                                   +++...         ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+||
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dikp~NIli~~~~~~kl~Df  182 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDF  182 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC-BCSCCSGGGEEECTTCCEEECCT
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCccceEEEcCCCeEEECcC
Confidence                         222211         1246889999999999999999999999 99999999999999999999999


Q ss_pred             ccchhc
Q psy6828         153 GLTEFK  158 (392)
Q Consensus       153 Gla~~~  158 (392)
                      |+++..
T Consensus       183 g~~~~~  188 (322)
T 1p4o_A          183 GMTRDI  188 (322)
T ss_dssp             TCCCGG
T ss_pred             cccccc
Confidence            999754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=3.7e-20  Score=175.71  Aligned_cols=116  Identities=21%  Similarity=0.212  Sum_probs=91.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||+|.+.     .+++.||+|.+..... ...+.+.+|+.+                      
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            345667789999999999999974     3567899999975432 334567777776                      


Q ss_pred             --------------HHhhcCC----------------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCc
Q psy6828          95 --------------DIMENED----------------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASN  138 (392)
Q Consensus        95 --------------~~l~~~~----------------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~N  138 (392)
                                    +++....                      ..+++..+..++.|++.||.|||++++ +||||||+|
T Consensus       124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dikp~N  202 (344)
T 1rjb_A          124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-VHRDLAARN  202 (344)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE-EETTCSGGG
T ss_pred             cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChhh
Confidence                          3333322                      137899999999999999999999999 999999999


Q ss_pred             eEEcCCceEEEeccccchhcc
Q psy6828         139 CLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus       139 Ill~~~~~~kl~DFGla~~~~  159 (392)
                      ||++.++.+||+|||+++...
T Consensus       203 Ill~~~~~~kL~Dfg~~~~~~  223 (344)
T 1rjb_A          203 VLVTHGKVVKICDFGLARDIM  223 (344)
T ss_dssp             EEEETTTEEEECCCGGGSCGG
T ss_pred             EEEcCCCcEEeCCCccCcccc
Confidence            999999999999999997553

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.80  E-value=8.1e-20  Score=171.97  Aligned_cols=133  Identities=23%  Similarity=0.315  Sum_probs=104.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+++.||||++..... ..+.+.+|+.+                            
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            4556677889999999999999988999999999865432 23445566554                            


Q ss_pred             --------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 --------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                    +++... ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence                          222221 2358999999999999999999999999 999999999999999999999999987532


Q ss_pred             cc----------------------------ccccccccceeeeeee
Q psy6828         160 DA----------------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~----------------------------~~~~~d~~s~g~~~~~  177 (392)
                      ..                            .....|+||+|+++|+
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  226 (326)
T 2x7f_A          181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE  226 (326)
T ss_dssp             ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHH
T ss_pred             cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHH
Confidence            11                            0123499999999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.80  E-value=5.2e-20  Score=170.65  Aligned_cols=127  Identities=21%  Similarity=0.346  Sum_probs=102.7

Q ss_pred             CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------------   94 (392)
                      ..||+|+||.||+|.+..+++.||||.+........+.+.+|+.+                                   
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            369999999999999999999999999987665556778888877                                   


Q ss_pred             HHhhcC--CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhcccc----------
Q psy6828          95 DIMENE--DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRDA----------  161 (392)
Q Consensus        95 ~~l~~~--~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~~----------  161 (392)
                      +++...  ...+++..+..++.|++.||.|||++++ +||||||+||+++. ++.+||+|||+++.....          
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  186 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI-VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGT  186 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCC
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE-EccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCC
Confidence            444332  2356789999999999999999999999 99999999999987 899999999998754321          


Q ss_pred             ---------------ccccccccceeeeeee
Q psy6828         162 ---------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ---------------~~~~~d~~s~g~~~~~  177 (392)
                                     .....|+||+|+++|+
T Consensus       187 ~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  217 (295)
T 2clq_A          187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIE  217 (295)
T ss_dssp             GGGCCHHHHHHGGGGCSHHHHHHHHHHHHHH
T ss_pred             ccccChhhhcCCCCCCCcHHHHHHHHHHHHH
Confidence                           1123499999999988

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.80  E-value=5.9e-20  Score=175.33  Aligned_cols=132  Identities=17%  Similarity=0.150  Sum_probs=90.8

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||++...... .+...+|+..                             
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  101 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL  101 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence            3466788999999999999999999999999988654321 1112222221                             


Q ss_pred             ------------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHh--cCCcccccCCCCCceEEcC-CceEEEeccccch
Q psy6828          95 ------------DIME---NEDVKLDNMFIASLVADILRGMLYLH--DSALRYHGNLKASNCLVDS-RWVVKLADFGLTE  156 (392)
Q Consensus        95 ------------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH--~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~  156 (392)
                                  +.+.   .....+++..+..++.|++.||.|||  ++++ +||||||+|||++. ++.+||+|||+++
T Consensus       102 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~i-vH~Dlkp~NIll~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          102 NVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV-CHRDIKPHNVLVNEADGTLKLCDFGSAK  180 (360)
T ss_dssp             EEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCC-BCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred             EEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCe-ecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence                        0111   12336889999999999999999999  9999 99999999999997 8999999999997


Q ss_pred             hccccc-----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                       ....|+||+|+++|+
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  224 (360)
T 3e3p_A          181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAE  224 (360)
T ss_dssp             CCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             ecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            543221                       112399999999998

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.80  E-value=1.1e-20  Score=177.91  Aligned_cols=116  Identities=22%  Similarity=0.356  Sum_probs=92.9

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------   94 (392)
                      ....|...+.||+|+||.||+|. ..+|+.||||++...... ....+.+|+.+                          
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  106 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY  106 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEEC-CSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEE
T ss_pred             HhhccccceeEecCCCcEEEEEE-ecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEE
Confidence            45567778899999999999997 446899999999765432 22257778776                          


Q ss_pred             ---------HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcC---CcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------DIMENE---DVKLDNMFIASLVADILRGMLYLHDS---ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~---~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                               +++...   ...+++..+..++.|++.||.|||++   ++ +||||||+|||++.++.+||+|||+++...
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          107 PYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI-IHRDVKAANILLDEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             ECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCE-ECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe-EeCCCchhhEEECCCCCEEeccCccccccC
Confidence                     333322   12499999999999999999999999   99 999999999999999999999999997643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.80  E-value=3.9e-20  Score=175.20  Aligned_cols=127  Identities=14%  Similarity=0.125  Sum_probs=98.2

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH----H----------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI----D----------------   95 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~----~----------------   95 (392)
                      ..|...+.||+|+||+||+|.+  +|+.||||+++....        ...+.+.+|+.+    .                
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            4456677899999999999986  789999999975431        122344444443    1                


Q ss_pred             ---------------------------------------------HhhcC-------CcCCCHHHHHHHHHHHHHHHHHH
Q psy6828          96 ---------------------------------------------IMENE-------DVKLDNMFIASLVADILRGMLYL  123 (392)
Q Consensus        96 ---------------------------------------------~l~~~-------~~~l~~~~~~~i~~qi~~~l~yl  123 (392)
                                                                   ++..+       ...+++.++..++.||+.||.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                                                         00011       12479999999999999999999


Q ss_pred             h-cCCcccccCCCCCceEEcCCc--------------------eEEEeccccchhccccccccccccceeeeeeeccC
Q psy6828         124 H-DSALRYHGNLKASNCLVDSRW--------------------VVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNR  180 (392)
Q Consensus       124 H-~~~iiiHrDlKp~NIll~~~~--------------------~~kl~DFGla~~~~~~~~~~~d~~s~g~~~~~~~~  180 (392)
                      | ++++ +||||||+|||++.++                    .+||+|||+|+.....       +..|+..|.+||
T Consensus       178 H~~~~i-vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE  247 (336)
T 2vuw_A          178 EASLRF-EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDED  247 (336)
T ss_dssp             HHHHCC-BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSG
T ss_pred             HHhCCE-eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChh
Confidence            9 9999 9999999999999887                    8999999999876542       457888888777

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.80  E-value=7.9e-20  Score=188.11  Aligned_cols=133  Identities=20%  Similarity=0.264  Sum_probs=106.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      ..|...+.||+|+||.||+|.+..+   +..||||.+..... ...+.+.+|+.+                         
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~  469 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM  469 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEE
Confidence            3455677899999999999987654   46799999876433 445678888877                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus       470 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi-vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~  548 (656)
T 2j0j_A          470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK  548 (656)
T ss_dssp             ECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----
T ss_pred             EcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccchHhEEEeCCCCEEEEecCCCeecCCCccee
Confidence                     4454444469999999999999999999999999 9999999999999999999999999986533211  


Q ss_pred             ----------------------ccccccceeeeeee
Q psy6828         164 ----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------------~~~d~~s~g~~~~~  177 (392)
                                            ...|+||+|+++|+
T Consensus       549 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  584 (656)
T 2j0j_A          549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  584 (656)
T ss_dssp             -----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHH
Confidence                                  12389999999887

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.80  E-value=1.9e-20  Score=179.09  Aligned_cols=133  Identities=20%  Similarity=0.272  Sum_probs=108.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------   94 (392)
                      ...|...+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+                           
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            345666778999999999999999999999999997653 3445678888877                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                              +++... ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||+++......   
T Consensus       112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  189 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  189 (360)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHCC-CCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHhCCE-EcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence                    233222 2589999999999999999999986 89 999999999999999999999999986532111   


Q ss_pred             ------------------cccccccceeeeeee
Q psy6828         163 ------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ------------------~~~~d~~s~g~~~~~  177 (392)
                                        ....|+||+|+++|+
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  222 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE  222 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHH
Confidence                              112499999999998

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.80  E-value=2e-20  Score=173.96  Aligned_cols=114  Identities=26%  Similarity=0.349  Sum_probs=79.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||||.+..... ...+.+.+|+.+                            
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            345567789999999999999999999999999975432 334566777766                            


Q ss_pred             -------HHhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -------DIMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -------~~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                             +++..       ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCC-CCCCCChhhEEEcCCCCEEEEeccchhee
Confidence                   33321       23358999999999999999999999999 99999999999999999999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.80  E-value=3.2e-20  Score=173.79  Aligned_cols=115  Identities=23%  Similarity=0.284  Sum_probs=94.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||+|.+.     .+++.||||.+..... ...+.+.+|+.+                      
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            345667788999999999999854     4668999999976543 345567788776                      


Q ss_pred             ---------------HHhhcCCc---------------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 ---------------DIMENEDV---------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ---------------~~l~~~~~---------------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                     +++.....               .+++..+..++.|++.||.|||++++ +||||||+||+++.+
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~H~dikp~Nil~~~~  184 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEK  184 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGG
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCc-ccccCccceEEECCC
Confidence                           33333221               18899999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhc
Q psy6828         145 WVVKLADFGLTEFK  158 (392)
Q Consensus       145 ~~~kl~DFGla~~~  158 (392)
                      +.+||+|||+++..
T Consensus       185 ~~~kl~Dfg~~~~~  198 (316)
T 2xir_A          185 NVVKICDFGLARDI  198 (316)
T ss_dssp             GCEEECCCGGGSCT
T ss_pred             CCEEECCCcccccc
Confidence            99999999999754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.80  E-value=2.9e-20  Score=176.68  Aligned_cols=132  Identities=22%  Similarity=0.315  Sum_probs=106.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-----------------HHHHHHHHHHH-----------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-----------------ITRAMKKELKI-----------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-----------------~~~~~~~E~~~-----------   94 (392)
                      ...|...+.||+|+||.||+|.+  +++.||||.+......                 ..+.+.+|+.+           
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            34567778899999999999997  8999999998643221                 12778888887           


Q ss_pred             ------------------------HH------hhc-CCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEc
Q psy6828          95 ------------------------DI------MEN-EDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVD  142 (392)
Q Consensus        95 ------------------------~~------l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~  142 (392)
                                              ++      +.. ....+++..+..++.|++.||.|||+ +++ +||||||+||+++
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i-~H~dl~p~Nil~~  186 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI-CHRDVKPSNILMD  186 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCE-ECCCCCGGGEEEC
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCE-eecCCChHhEEEc
Confidence                                    22      222 13468999999999999999999999 999 9999999999999


Q ss_pred             CCceEEEeccccchhcccc---------------------c-cc-cccccceeeeeee
Q psy6828         143 SRWVVKLADFGLTEFKRDA---------------------E-YT-GTDQHSFLQHTYH  177 (392)
Q Consensus       143 ~~~~~kl~DFGla~~~~~~---------------------~-~~-~~d~~s~g~~~~~  177 (392)
                      .++.+||+|||++......                     . .. ..|+||+|+++|+
T Consensus       187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~  244 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV  244 (348)
T ss_dssp             TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHH
Confidence            9999999999998753221                     0 01 4599999999998

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.80  E-value=5.4e-20  Score=175.17  Aligned_cols=113  Identities=27%  Similarity=0.325  Sum_probs=95.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+..+|+.||||.+..... .....+.+|+.+                           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            4456667789999999999999999999999999975433 445567788776                           


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                  +++..  ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        90 ~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~i-vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           90 YIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNV-IHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EEEECCCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeccCccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence                        12222  258999999999999999999999999 99999999999999999999999998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.80  E-value=4.3e-20  Score=169.86  Aligned_cols=132  Identities=20%  Similarity=0.247  Sum_probs=105.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+.....  ...+.+.+|+.+                            
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   86 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   86 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred             heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence            45566789999999999999999999999999976543  445667888877                            


Q ss_pred             ---------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCC-----cccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSA-----LRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~-----iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                               +++..   ....+++..+..++.|++.||.|||+++     + +||||||+||+++.++.+||+|||+++.
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~i-vH~dl~p~NIl~~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV-LHRDLKPANVFLDGKQNVKLGDFGLARI  165 (279)
T ss_dssp             ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC-------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred             eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCee-EEeccchhhEEEcCCCCEEEecCchhee
Confidence                     22221   1124899999999999999999999998     8 9999999999999999999999999876


Q ss_pred             ccccc-----------------------cccccccceeeeeee
Q psy6828         158 KRDAE-----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       158 ~~~~~-----------------------~~~~d~~s~g~~~~~  177 (392)
                      .....                       ....|+||+|+++|+
T Consensus       166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  208 (279)
T 2w5a_A          166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE  208 (279)
T ss_dssp             C---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHH
T ss_pred             eccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHH
Confidence            43221                       112499999999998

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=8.5e-20  Score=172.47  Aligned_cols=107  Identities=23%  Similarity=0.279  Sum_probs=86.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+  +++.||||++.....   .....|.++                            
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            34566778899999999999975  499999999864432   233334333                            


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC--------CcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDS--------ALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~--------~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                                   ++++..  .+++..+..++.|++.||.|||++        ++ +||||||+|||++.++.+||+|||
T Consensus       111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i-vH~Dikp~Nill~~~~~~kl~Dfg  187 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI-AHRDLKSKNILVKKNGTCCIADLG  187 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCE-ECSCCCGGGEEECTTSCEEECCCT
T ss_pred             EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCE-EecccchHHEEECCCCCEEEEeCC
Confidence                         222222  589999999999999999999998        99 999999999999999999999999


Q ss_pred             cchh
Q psy6828         154 LTEF  157 (392)
Q Consensus       154 la~~  157 (392)
                      +++.
T Consensus       188 ~a~~  191 (337)
T 3mdy_A          188 LAVK  191 (337)
T ss_dssp             TCEE
T ss_pred             Ccee
Confidence            9864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.80  E-value=2.5e-20  Score=175.63  Aligned_cols=110  Identities=20%  Similarity=0.281  Sum_probs=89.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+  .++.||||++..... ......+|+.+                            
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            45567778899999999999975  489999999965432 22334446554                            


Q ss_pred             -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC----------CcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDS----------ALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~----------~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                                 ++++..  .+++..+..++.|++.||.|||+.          ++ +||||||+|||++.++.+||+|||
T Consensus       100 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~i-vH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI-SHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEE-ECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCE-EeCCCChHhEEECCCCeEEEccCC
Confidence                       233222  489999999999999999999999          99 999999999999999999999999


Q ss_pred             cchhc
Q psy6828         154 LTEFK  158 (392)
Q Consensus       154 la~~~  158 (392)
                      +++..
T Consensus       177 ~a~~~  181 (322)
T 3soc_A          177 LALKF  181 (322)
T ss_dssp             TCEEE
T ss_pred             ccccc
Confidence            99754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.80  E-value=5.3e-20  Score=168.89  Aligned_cols=112  Identities=25%  Similarity=0.352  Sum_probs=94.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH-----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-----------------------------   94 (392)
                      .|...+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+                             
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (276)
T 2yex_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (276)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence            3555667999999999999999999999999986443 2445677888877                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.. ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        88 ~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A           88 SGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             TTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCChHHEEEccCCCEEEeeCCCcccc
Confidence                  22222 2368999999999999999999999999 99999999999999999999999998754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.79  E-value=1.1e-19  Score=173.40  Aligned_cols=133  Identities=23%  Similarity=0.305  Sum_probs=105.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------HH------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------DI------------   96 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~~------------   96 (392)
                      ..|...+.||+|+||.||+|.+..+|+.||||.+.....  ...+.+.+|+.+             ++            
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            456677889999999999999999999999999976432  345667788777             00            


Q ss_pred             ------------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---
Q psy6828          97 ------------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---  161 (392)
Q Consensus        97 ------------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---  161 (392)
                                  .......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....   
T Consensus       104 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i-vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  182 (353)
T 3coi_A          104 FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV-VHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG  182 (353)
T ss_dssp             CEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred             EEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEeECCCCcEEEeecccccCCCCCccc
Confidence                        01112258999999999999999999999999 99999999999999999999999998754221   


Q ss_pred             ------------------ccccccccceeeeeee
Q psy6828         162 ------------------EYTGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ------------------~~~~~d~~s~g~~~~~  177 (392)
                                        .....|+||+|+++|+
T Consensus       183 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~e  216 (353)
T 3coi_A          183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE  216 (353)
T ss_dssp             -CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHH
T ss_pred             cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHH
Confidence                              1123488999998888

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.79  E-value=3.8e-20  Score=174.13  Aligned_cols=134  Identities=24%  Similarity=0.312  Sum_probs=100.7

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEe-ecCcEEEEEEcCCCChh--HHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGI-YKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------------------   94 (392)
                      ...|...+.||+|+||.||++.+. .+|+.||+|.++.....  ....+.+|+.+                         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            345667788999999999999985 67899999998642210  01112223222                         


Q ss_pred             -----------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 -----------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 -----------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                       +++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++
T Consensus        90 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi-~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCHHHeEEcCCCCEEEecCcccc
Confidence                             22222 22248999999999999999999999999 999999999999999999999999987


Q ss_pred             hccccc----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                      ....|+||+|+++|+
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  211 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE  211 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHH
Confidence            543211                      112399999999998

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.79  E-value=5.4e-20  Score=175.00  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=84.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCChhHH-----------HHHHHHHHH--------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKSVDIT-----------RAMKKELKI--------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~-----------~~~~~E~~~--------------   94 (392)
                      ...|...+.||+|+||.||+|.+..   ++..||||.+........           +.+.+|+..              
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            3567778899999999999999887   788999999976542111           112333333              


Q ss_pred             ------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc--eEE
Q psy6828          95 ------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW--VVK  148 (392)
Q Consensus        95 ------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~--~~k  148 (392)
                                              +++.... .+++.++..++.|++.||.|||++++ +||||||+|||++.++  .+|
T Consensus       116 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEY-VHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEESSSTTSEE
T ss_pred             ccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCcCHHHEEEccCCCCcEE
Confidence                                    2222222 68999999999999999999999999 9999999999998887  999


Q ss_pred             Eeccccchhc
Q psy6828         149 LADFGLTEFK  158 (392)
Q Consensus       149 l~DFGla~~~  158 (392)
                      |+|||+++..
T Consensus       194 L~Dfg~a~~~  203 (345)
T 2v62_A          194 LADYGLSYRY  203 (345)
T ss_dssp             ECCCTTCEES
T ss_pred             EEeCCCceec
Confidence            9999999754

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.79  E-value=6.9e-20  Score=173.70  Aligned_cols=132  Identities=17%  Similarity=0.189  Sum_probs=98.6

Q ss_pred             eeeec-cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLS-SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~-~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..|.. .+.||+|+||.||+|.+..+|+.||||++.... ...+.+..+...                            
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  106 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME  106 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence            34444 456999999999999999999999999996542 222333333332                            


Q ss_pred             --------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccccc
Q psy6828          95 --------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 --------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~  162 (392)
                              +++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.+   +.+||+|||+++......
T Consensus       107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i-vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~  185 (336)
T 3fhr_A          107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI-AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA  185 (336)
T ss_dssp             CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEEecCCCceEEEeccccceeccccc
Confidence                    333332 2369999999999999999999999999 999999999999764   559999999997543221


Q ss_pred             c---------------------ccccccceeeeeee
Q psy6828         163 Y---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ~---------------------~~~d~~s~g~~~~~  177 (392)
                      .                     ...|+||+|+++|+
T Consensus       186 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~  221 (336)
T 3fhr_A          186 LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  221 (336)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHH
Confidence            1                     12388888888887

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=7e-20  Score=171.62  Aligned_cols=112  Identities=17%  Similarity=0.312  Sum_probs=82.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||.||++.+..+|+.||||++..... ........|...                              
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~  106 (318)
T 2dyl_A           27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM  106 (318)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc
Confidence            4556789999999999999999999999999976543 222233333322                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           .+.......+++..+..++.|++.||.|||++ ++ +||||||+||+++.++.+||+|||++...
T Consensus       107 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV-IHRDVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCE-EeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence                 22222234689999999999999999999995 99 99999999999999999999999998654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.79  E-value=4e-19  Score=166.20  Aligned_cols=127  Identities=20%  Similarity=0.220  Sum_probs=96.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.||+|+||.||++.+  .++.||||.+....  ..+.+.+|+.+                               
T Consensus        10 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~   85 (307)
T 2eva_A           10 IEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS   85 (307)
T ss_dssp             EEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred             eeeeeEeecCCCceEEEEEE--CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence            44566799999999999975  58999999997543  34667788776                               


Q ss_pred             --HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhc---CCcccccCCCCCceEEcCCce-EEEeccccchhccccc----
Q psy6828          95 --DIMENEDV--KLDNMFIASLVADILRGMLYLHD---SALRYHGNLKASNCLVDSRWV-VKLADFGLTEFKRDAE----  162 (392)
Q Consensus        95 --~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~---~~iiiHrDlKp~NIll~~~~~-~kl~DFGla~~~~~~~----  162 (392)
                        +++.....  .+++..+..++.|++.||.|||+   +++ +||||||+|||++.++. +||+|||++.......    
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~i-vH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (307)
T 2eva_A           86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL-IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK  164 (307)
T ss_dssp             HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCC-CCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred             HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCe-ecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence              33332221  37889999999999999999999   788 99999999999988876 7999999987543211    


Q ss_pred             ----------------cccccccceeeeeee
Q psy6828         163 ----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ----------------~~~~d~~s~g~~~~~  177 (392)
                                      ....|+||+|+++|+
T Consensus       165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  195 (307)
T 2eva_A          165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWE  195 (307)
T ss_dssp             CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHH
T ss_pred             CCCceEChhhhCCCCCCcHHHHHHHHHHHHH
Confidence                            123499999999998

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.79  E-value=5.8e-20  Score=171.22  Aligned_cols=114  Identities=18%  Similarity=0.275  Sum_probs=96.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----hHHHHHHHHHHH-------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----DITRAMKKELKI-------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~-------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+++.||+|.+.+...    ...+.+.+|+.+                         
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            346667889999999999999999999999999975432    345678888887                         


Q ss_pred             -----------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                 +++. .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus        85 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI-VHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCcccEEEcCCCcEEeecccccccc
Confidence                       2222 123469999999999999999999999999 99999999999999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=9.1e-20  Score=168.68  Aligned_cols=133  Identities=20%  Similarity=0.263  Sum_probs=106.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .+.|...+.||+|+||.||++.+..+++.||+|++.....  ...+.+.+|+.+                          
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            4557777889999999999999988999999999865432  345667888877                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccccc
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAE  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~  162 (392)
                               +++... ..+++.++..++.|++.||.|||++++ +||||||+||+++.+   +.+||+|||++.......
T Consensus       101 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i-~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHNI-VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             EccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence                     222221 258999999999999999999999999 999999999999764   469999999987653322


Q ss_pred             ---------------------cccccccceeeeeee
Q psy6828         163 ---------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 ---------------------~~~~d~~s~g~~~~~  177 (392)
                                           ....|+||+|+++|+
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~  214 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYI  214 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHH
T ss_pred             ccccccCcccccChHHhcCCCCCchhhHhHHHHHHH
Confidence                                 123499999999988

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.79  E-value=2.3e-19  Score=181.62  Aligned_cols=108  Identities=19%  Similarity=0.262  Sum_probs=80.3

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----------hHHHHHHHHHHH------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----------DITRAMKKELKI------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~E~~~------------------------   94 (392)
                      ....+.|++|.+..++..+.|+.||+|.+.+...          ...+.+.+|+++                        
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            3457889999999999999999999999975421          234568889888                        


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  161 (392)
                                  +++.... .+++.   .|+.||+.||.|+|++|| |||||||+|||++.+|.+||+|||+|+.....
T Consensus       319 LVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~GI-IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQGF-WHDDVRPWNVMVDARQHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTTC-EESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred             EEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCCc-eeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence                        4444443 57665   478999999999999999 99999999999999999999999999876543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.78  E-value=1.8e-19  Score=169.99  Aligned_cols=115  Identities=18%  Similarity=0.239  Sum_probs=89.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEE-----EeecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPI-----GIYKGRIFAIKRIPKKS-VDITRAMKKELKI----------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------   94 (392)
                      ...|...+.||+|+||.||+|.     +..+++.||||.+.... ......+.+|+.+                      
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            4556778889999999999998     55678899999997543 2445567788876                      


Q ss_pred             -------------HHhhcCC------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEecc
Q psy6828          95 -------------DIMENED------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADF  152 (392)
Q Consensus        95 -------------~~l~~~~------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DF  152 (392)
                                   +++....      ..+++.++..++.|++.||.|||++++ +||||||+|||++.+   ..+||+||
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i-~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe-ecCcCCHhHEEEecCCCcceEEECcc
Confidence                         4444322      248999999999999999999999999 999999999999844   46999999


Q ss_pred             ccchhc
Q psy6828         153 GLTEFK  158 (392)
Q Consensus       153 Gla~~~  158 (392)
                      |+++..
T Consensus       188 g~~~~~  193 (327)
T 2yfx_A          188 GMARDI  193 (327)
T ss_dssp             HHHHHH
T ss_pred             cccccc
Confidence            998754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.78  E-value=2e-19  Score=167.86  Aligned_cols=130  Identities=18%  Similarity=0.328  Sum_probs=102.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC----hhHHHHHHHHHHH--------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS----VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~~E~~~--------------------------   94 (392)
                      .+...+.||+|+||.||+|..  +++.||+|.+....    ....+.+.+|+.+                          
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence            344567899999999999974  68999999987532    2445678888877                          


Q ss_pred             ---------HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 ---------DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 ---------~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                               +++..  ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...... 
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred             EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe-ecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence                     33321  12358999999999999999999999999 999999999999999999999999987543211 


Q ss_pred             -----------------------cccccccceeeeeee
Q psy6828         163 -----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------------~~~~d~~s~g~~~~~  177 (392)
                                             ....|+||+|+++|+
T Consensus       189 ~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~  226 (307)
T 2nru_A          189 TVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLE  226 (307)
T ss_dssp             CEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHH
T ss_pred             cccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHH
Confidence                                   112388888888887

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.78  E-value=1.9e-19  Score=168.66  Aligned_cols=113  Identities=19%  Similarity=0.300  Sum_probs=92.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||++.+. +++.||||.+.....  ...+.+.+|+.+                          
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            456777889999999999999864 589999999975433  445667777766                          


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                +++.... .+++.++..++.|++.||.|||++++ +||||||+|||+++ +.+||+|||+++...
T Consensus       106 v~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          106 VMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGI-VHSDLKPANFLIVD-GMLKLIDFGIANQMQ  177 (313)
T ss_dssp             EECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred             EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCcccEEEEC-CeEEEeecccccccc
Confidence                      3333332 68999999999999999999999999 99999999999964 899999999987643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.77  E-value=5.3e-19  Score=166.60  Aligned_cols=115  Identities=18%  Similarity=0.256  Sum_probs=92.6

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||||.++.... .....+..|...                            
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            446667889999999999999999999999999976533 334455566553                            


Q ss_pred             -------HHhh----cCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIME----NEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~----~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++.    .....+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||+++...
T Consensus       102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~i-vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKI-IHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSC-CCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCE-eECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence                   2222    1234689999999999999999999998 99 999999999999999999999999987643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.77  E-value=2.2e-19  Score=170.07  Aligned_cols=109  Identities=21%  Similarity=0.281  Sum_probs=89.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||.||++.+  +|+.||||.+....   .+.+.+|..+                            
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~  115 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL  115 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence            34566778899999999999975  69999999996543   3345555554                            


Q ss_pred             -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHh--------cCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828          95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLH--------DSALRYHGNLKASNCLVDSRWVVKLADFG  153 (392)
Q Consensus        95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH--------~~~iiiHrDlKp~NIll~~~~~~kl~DFG  153 (392)
                                   +++...  .+++.++..++.|++.||.|||        ++++ +||||||+|||++.++.+||+|||
T Consensus       116 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg  192 (342)
T 1b6c_B          116 WLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNGTCCIADLG  192 (342)
T ss_dssp             EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEE-ECSCCSGGGEEECTTSCEEECCCT
T ss_pred             EEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCe-eeCCCCHHHEEECCCCCEEEEECC
Confidence                         222222  5899999999999999999999        8899 999999999999999999999999


Q ss_pred             cchhcc
Q psy6828         154 LTEFKR  159 (392)
Q Consensus       154 la~~~~  159 (392)
                      +++...
T Consensus       193 ~~~~~~  198 (342)
T 1b6c_B          193 LAVRHD  198 (342)
T ss_dssp             TCEEEE
T ss_pred             Cceecc
Confidence            987544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.77  E-value=2.7e-19  Score=185.36  Aligned_cols=133  Identities=17%  Similarity=0.156  Sum_probs=105.2

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||++.+.. +|+.||||.+.... ....+.+.+|+.+                          
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            3557778899999999999999876 78999999987543 3455677888877                          


Q ss_pred             -----HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828          95 -----DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-  162 (392)
Q Consensus        95 -----~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-  162 (392)
                           +++..      ....+++.++..++.||+.||.|||++++ +||||||+|||++.+ .+||+|||+++...... 
T Consensus       159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi-iHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~  236 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGL-VYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGY  236 (681)
T ss_dssp             EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECSS-CEEECCCTTCEETTCCSC
T ss_pred             eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecccChHHeEEeCC-cEEEEecccchhcccCCc
Confidence                 11111      11158999999999999999999999999 999999999999875 89999999997654321 


Q ss_pred             -----------------cccccccceeeeeee
Q psy6828         163 -----------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -----------------~~~~d~~s~g~~~~~  177 (392)
                                       ...+|+||||+++|+
T Consensus       237 ~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~  268 (681)
T 2pzi_A          237 LYGTPGFQAPEIVRTGPTVATDIYTVGRTLAA  268 (681)
T ss_dssp             CCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHH
T ss_pred             cCCCccccCHHHHcCCCCCceehhhhHHHHHH
Confidence                             112388888888887

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.75  E-value=6e-19  Score=179.83  Aligned_cols=133  Identities=20%  Similarity=0.213  Sum_probs=106.0

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC-ChhHHHHHHHHHHH----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK-SVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..|...+.||+|+||.||++.+..+|+.||||.++.. .....+.+.+|+.+                            
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            4577788999999999999999999999999999764 23455678888877                            


Q ss_pred             -------------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccch
Q psy6828          95 -------------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTE  156 (392)
Q Consensus        95 -------------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~  156 (392)
                                   +++....  ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.   +||+|||++.
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gI-VHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI-IHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTB-CCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCHHHeEeecCCCceeEEEccccccc
Confidence                         2222211  148889999999999999999999999 99999999999997764   9999999997


Q ss_pred             hccccc----------------------cccccccceeeeeee
Q psy6828         157 FKRDAE----------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~----------------------~~~~d~~s~g~~~~~  177 (392)
                      ......                      ....|+||+|+++|+
T Consensus       173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLye  215 (676)
T 3qa8_A          173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE  215 (676)
T ss_dssp             BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHH
T ss_pred             ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHH
Confidence            643321                      113399999999999

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.74  E-value=2.9e-19  Score=167.58  Aligned_cols=110  Identities=24%  Similarity=0.323  Sum_probs=85.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      ...|...+.||+|+||.||+|.+.   ..||+|.++....  ...+.+.+|+.+                          
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEES---SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             HHHeEEeeEeccCCceEEEEEEEc---CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            345677889999999999999754   3499999975322  122334445544                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                               +++......+++.++..++.|++.||.|||++++ +||||||+||+++ ++.+||+|||+++.
T Consensus       109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI-LHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCChhhEEEe-CCCEEEeecCCccc
Confidence                     4555544469999999999999999999999999 9999999999998 67999999998764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.72  E-value=2.9e-18  Score=168.04  Aligned_cols=109  Identities=21%  Similarity=0.291  Sum_probs=83.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||+|+. ....+++.||||++.......   +.+|+.+                              
T Consensus        25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~---~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~  100 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSF---ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC  100 (432)
T ss_dssp             EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEE---CHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHH---HHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence            355567899999999763 446789999999997654321   2233333                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-----ceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-----WVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-----~~~kl~DFGla~~~  158 (392)
                           +++......+++.++..++.|++.||.|||++++ +||||||+|||++.+     ..+||+|||+++..
T Consensus       101 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI-VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             SEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC-CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC-EeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence                 4555555556667788999999999999999999 999999999999532     35889999998754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.71  E-value=6.6e-18  Score=165.70  Aligned_cols=111  Identities=25%  Similarity=0.344  Sum_probs=82.4

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ..++...+.||+|+||+||.+ ...+|+.||||++....   .+.+.+|+.+                            
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            455666778999999999875 46789999999986442   3345566655                            


Q ss_pred             -------HHhhcCCcC------CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-------------ceEE
Q psy6828          95 -------DIMENEDVK------LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-------------WVVK  148 (392)
Q Consensus        95 -------~~l~~~~~~------l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-------------~~~k  148 (392)
                             +++......      .++..+..++.||+.||.|||++++ +||||||+|||++.+             +.+|
T Consensus        90 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           90 LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-IHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             CCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             cCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCc-cccCCChHhEEEecCcccccccccCCCceEEE
Confidence                   333322211      1233456799999999999999999 999999999999764             4899


Q ss_pred             Eeccccchhc
Q psy6828         149 LADFGLTEFK  158 (392)
Q Consensus       149 l~DFGla~~~  158 (392)
                      |+|||+++..
T Consensus       169 L~DFG~a~~~  178 (434)
T 2rio_A          169 ISDFGLCKKL  178 (434)
T ss_dssp             ECCCTTCEEC
T ss_pred             Ecccccceec
Confidence            9999998754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.70  E-value=7.6e-18  Score=155.68  Aligned_cols=108  Identities=16%  Similarity=0.149  Sum_probs=83.4

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------------------hHHHHHHHHHHH----------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------------------DITRAMKKELKI----------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------------------~~~~~~~~E~~~----------------   94 (392)
                      .+.||+|+||.||+|.+ .+|+.||||.++....                  .....+.+|+.+                
T Consensus        95 ~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~~~~  173 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE  173 (282)
T ss_dssp             EEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             cCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEEecc
Confidence            47899999999999998 8899999999965322                  124557777765                


Q ss_pred             ------HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ------DIMENEDV-KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                            +++..+.+ .+...+...++.|++.||.|||++++ +||||||+|||++ ++.+||+|||+|+...
T Consensus       174 ~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~gi-iHrDlkp~NILl~-~~~vkl~DFG~a~~~~  243 (282)
T 1zar_A          174 GNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGI-VHGDLSQYNVLVS-EEGIWIIDFPQSVEVG  243 (282)
T ss_dssp             TTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTE-ECSCCSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred             ceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCCC-EeCCCCHHHEEEE-CCcEEEEECCCCeECC
Confidence                  11111111 12334566899999999999999999 9999999999999 9999999999987543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.65  E-value=1.1e-16  Score=146.05  Aligned_cols=110  Identities=17%  Similarity=0.272  Sum_probs=82.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcE--EEEEEcCCCChh------------------------HHHHHHHHHHH-----
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRI--FAIKRIPKKSVD------------------------ITRAMKKELKI-----   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~~~~------------------------~~~~~~~E~~~-----   94 (392)
                      +...+.||+|+||.||+|.+..+|+.  ||||+++.....                        ....+.+|..+     
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            34457899999999999998789999  999987543211                        11245666655     


Q ss_pred             -------------------HHhhc-C----Cc-----CCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCC
Q psy6828          95 -------------------DIMEN-E----DV-----KLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 -------------------~~l~~-~----~~-----~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~  144 (392)
                                         +++.. +    ..     ..++..+..++.|++.+|.||| ++++ +||||||+|||++. 
T Consensus       129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~gi-vHrDlkp~NILl~~-  206 (258)
T 1zth_A          129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAEL-VHADLSEYNIMYID-  206 (258)
T ss_dssp             HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCE-ECSSCSTTSEEESS-
T ss_pred             hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCE-EeCCCCHHHEEEcC-
Confidence                               33311 0    00     1223467889999999999999 9999 99999999999988 


Q ss_pred             ceEEEeccccchhc
Q psy6828         145 WVVKLADFGLTEFK  158 (392)
Q Consensus       145 ~~~kl~DFGla~~~  158 (392)
                       .++|+|||+|...
T Consensus       207 -~~~liDFG~a~~~  219 (258)
T 1zth_A          207 -KVYFIDMGQAVTL  219 (258)
T ss_dssp             -SEEECCCTTCEET
T ss_pred             -cEEEEECcccccC
Confidence             8999999999754

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.65  E-value=7.7e-17  Score=162.13  Aligned_cols=121  Identities=17%  Similarity=0.201  Sum_probs=77.2

Q ss_pred             ccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH------------
Q psy6828          35 SWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI------------   94 (392)
Q Consensus        35 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~------------   94 (392)
                      .|.........+...+.||+|+||.||++  ...++.+++|.......        ...+++.+|+.+            
T Consensus       327 ~w~~~~~~~~~~~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~  404 (540)
T 3en9_A          327 NWIKEIKGKKRKIPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAP  404 (540)
T ss_dssp             CCC------------------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCC
T ss_pred             cccccccccccCCCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCce
Confidence            34444433444456778999999999999  56688999998755332        123457888877            


Q ss_pred             --------------HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------------DIMENEDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------------~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                    +|+..+++  .+..  +..++.|++.||.|||++++ +||||||+|||++.  .+||+|||+++..
T Consensus       405 ~~~~~~~~~~~lVmE~~~ggsL~~~l~~--~~~i~~qi~~aL~~LH~~gI-iHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          405 YIFDVDLDNKRIMMSYINGKLAKDVIED--NLDIAYKIGEIVGKLHKNDV-IHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             CEEEEETTTTEEEEECCCSEEHHHHSTT--CTHHHHHHHHHHHHHHHTTE-ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             EEEEEeCCccEEEEECCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHCcC-ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence                          11111110  0111  56899999999999999999 99999999999998  9999999999987


Q ss_pred             cccc
Q psy6828         159 RDAE  162 (392)
Q Consensus       159 ~~~~  162 (392)
                      ....
T Consensus       480 ~~~~  483 (540)
T 3en9_A          480 NLDE  483 (540)
T ss_dssp             CCHH
T ss_pred             CCcc
Confidence            6543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.41  E-value=8.6e-14  Score=132.76  Aligned_cols=110  Identities=19%  Similarity=0.123  Sum_probs=76.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---------------hH-----HHH--HHHHHHH--------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---------------DI-----TRA--MKKELKI--------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------------~~-----~~~--~~~E~~~--------   94 (392)
                      .|...++||+|+||.||+|.+ .+|+.||||+++....               ..     ..+  ..+|...        
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            466788999999999999986 4699999998753210               00     001  1122222        


Q ss_pred             ----------------HHhhcCCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----------e
Q psy6828          95 ----------------DIMENEDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----------V  146 (392)
Q Consensus        95 ----------------~~l~~~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----------~  146 (392)
                                      +++.....  ..+.+.+..++.|++.+|.|||++|+ |||||||.|||+++++          .
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gI-VHrDLKp~NILl~~dgd~~d~~~~~~~  253 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGL-IHGDFNEFNILIREEKDAEDPSSITLT  253 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTE-ECSCCSTTSEEEEEEECSSCTTSEEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCC-cCCCCCHHHEEEeCCCCcccccccccc
Confidence                            12211100  12334567789999999999999999 9999999999998876          3


Q ss_pred             EEEeccccch
Q psy6828         147 VKLADFGLTE  156 (392)
Q Consensus       147 ~kl~DFGla~  156 (392)
                      +.|+||+=+.
T Consensus       254 ~~iID~~Q~V  263 (397)
T 4gyi_A          254 PIIIXFPQMV  263 (397)
T ss_dssp             EEECCCTTCE
T ss_pred             eEEEEeCCcc
Confidence            8899998543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.16  E-value=1e-06  Score=79.53  Aligned_cols=106  Identities=16%  Similarity=0.203  Sum_probs=69.8

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-HHhhc-----------------------CCc-C
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-DIMEN-----------------------EDV-K  103 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-~~l~~-----------------------~~~-~  103 (392)
                      ....+.|+.+.||+...  .++.+++|..+.........+.+|..+ ..+..                       -.+ .
T Consensus        19 ~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   96 (263)
T 3tm0_A           19 VKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL   96 (263)
T ss_dssp             EECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred             EeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence            34567788899999863  378999999874211112235555554 11111                       000 1


Q ss_pred             C-----CHHHHHHHHHHHHHHHHHHhc-----------------------------------------------------
Q psy6828         104 L-----DNMFIASLVADILRGMLYLHD-----------------------------------------------------  125 (392)
Q Consensus       104 l-----~~~~~~~i~~qi~~~l~ylH~-----------------------------------------------------  125 (392)
                      +     +......++.++..+|..||+                                                     
T Consensus        97 l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  176 (263)
T 3tm0_A           97 CSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKT  176 (263)
T ss_dssp             HHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHH
T ss_pred             hhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHh
Confidence            1     122344678899999999998                                                     


Q ss_pred             ------CCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         126 ------SALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       126 ------~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                            ..+ +|+|++|.|||+++++.+.|+||+.+..
T Consensus       177 ~~~~~~~~l-~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          177 EKPEEELVF-SHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CCCCCCEEE-ECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cCCCCCceE-ECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                  224 8999999999998766677999987653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.16  E-value=1.1e-06  Score=78.80  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=25.1

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|++|.||++++++.++++||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            39999999999998776677999998754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.02  E-value=7.7e-06  Score=77.39  Aligned_cols=108  Identities=13%  Similarity=0.265  Sum_probs=72.5

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcC--CCCh-hHHHHHHHHHHH------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIP--KKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~--~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      ...+++.|.++.||+...  .+..+++|+..  .... .....+.+|..+                              
T Consensus        42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            345689999999999864  35789999886  3321 122345556555                              


Q ss_pred             -HHhhcCCc------CCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q psy6828          95 -DIMENEDV------KLDNMFIASLVADILRGMLYLHDS-----------------------------------------  126 (392)
Q Consensus        95 -~~l~~~~~------~l~~~~~~~i~~qi~~~l~ylH~~-----------------------------------------  126 (392)
                       +++.....      .++..+...++.++...|..||+.                                         
T Consensus       120 me~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (359)
T 3dxp_A          120 MEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS  199 (359)
T ss_dssp             EECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred             EEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence             11111110      245778888999999999999972                                         


Q ss_pred             ----------------CcccccCCCCCceEEcCCce--EEEeccccchh
Q psy6828         127 ----------------ALRYHGNLKASNCLVDSRWV--VKLADFGLTEF  157 (392)
Q Consensus       127 ----------------~iiiHrDlKp~NIll~~~~~--~kl~DFGla~~  157 (392)
                                      ..++|+|++|.|||++.++.  +.++||+.+..
T Consensus       200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                            12499999999999987753  68999998764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.08  E-value=0.00059  Score=62.71  Aligned_cols=102  Identities=16%  Similarity=0.164  Sum_probs=69.3

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-HHh------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-DIM------------------------------   97 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-~~l------------------------------   97 (392)
                      ..+++.|....||+..     +.+++|.....  .....+.+|..+ ..+                              
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            3457889999999873     56889986533  334556667665 111                              


Q ss_pred             -hcCCc------CCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q psy6828          98 -ENEDV------KLDNMFIASLVADILRGMLYLHDS--------------------------------------------  126 (392)
Q Consensus        98 -~~~~~------~l~~~~~~~i~~qi~~~l~ylH~~--------------------------------------------  126 (392)
                       .....      .++..+...++.|++..+..||+.                                            
T Consensus        98 i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  177 (304)
T 3sg8_A           98 IKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFY  177 (304)
T ss_dssp             CCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred             cCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence             10000      234555677888888888888851                                            


Q ss_pred             -------------CcccccCCCCCceEEcC--CceEEEeccccchh
Q psy6828         127 -------------ALRYHGNLKASNCLVDS--RWVVKLADFGLTEF  157 (392)
Q Consensus       127 -------------~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~  157 (392)
                                   ..++|+|++|.||+++.  ...+.++||+.+..
T Consensus       178 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          178 RDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             HHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             HHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence                         11389999999999988  55688999998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.79  E-value=0.017  Score=52.95  Aligned_cols=28  Identities=25%  Similarity=0.436  Sum_probs=23.6

Q ss_pred             cccCCCCCceEEcC---Cce-EEEeccccchh
Q psy6828         130 YHGNLKASNCLVDS---RWV-VKLADFGLTEF  157 (392)
Q Consensus       130 iHrDlKp~NIll~~---~~~-~kl~DFGla~~  157 (392)
                      +|+|++|.||+++.   ++. ..|+||+.+..
T Consensus       193 ~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          193 IHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             ECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             EeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            89999999999987   355 48999997754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.72  E-value=0.017  Score=54.86  Aligned_cols=31  Identities=16%  Similarity=0.118  Sum_probs=22.8

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcC
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIP   78 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~   78 (392)
                      ..+++|.|.++.||++....+++.|++|...
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~   64 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAV   64 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEEC
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecc
Confidence            3457899999999999766667899999864

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.12  E-value=0.022  Score=52.53  Aligned_cols=30  Identities=17%  Similarity=0.234  Sum_probs=26.2

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      ..+ +|+|++|.|||++.++.+.++||+.+.
T Consensus       222 ~~l-~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNL-CHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCE-ECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             Cce-ecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            345 999999999999888889999999764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.00  E-value=0.055  Score=48.89  Aligned_cols=46  Identities=9%  Similarity=0.117  Sum_probs=31.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~   94 (392)
                      ...++|.|..+.||+.. ..+|+.|.+|+-+.........+..|...
T Consensus        19 ~v~~~g~G~~~~vyrv~-l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~   64 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVE-LADGTPLFVKALPDDAPALDGLFRAEALG   64 (288)
T ss_dssp             EEEEEEEETTEEEEEEE-ETTSCEEEEEECCTTCCCCTTHHHHHHHH
T ss_pred             EEEecCCCCCeEEEEEE-ECCCCEEEEEEeCCCCcchhhHHHHHHHH
Confidence            34568999999999997 56789999998765433222334555544

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=94.09  E-value=0.0076  Score=55.02  Aligned_cols=28  Identities=11%  Similarity=0.354  Sum_probs=24.7

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++.+|.+.
T Consensus        70 ~~~~~E~~il~~l~HpnIV~~~~~~~~~   97 (290)
T 3fpq_A           70 QRFKEEAEMLKGLQHPNIVRFYDSWEST   97 (290)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEeec
Confidence            5688999999999999999999887653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=93.64  E-value=0.015  Score=54.51  Aligned_cols=28  Identities=14%  Similarity=0.204  Sum_probs=25.2

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        68 ~~~~~E~~il~~l~HpnIV~~~~~~~~~   95 (350)
T 4b9d_A           68 EESRREVAVLANMKHPNIVQYRESFEEN   95 (350)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence            5688999999999999999999888765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=93.63  E-value=0.066  Score=51.33  Aligned_cols=32  Identities=22%  Similarity=0.393  Sum_probs=26.9

Q ss_pred             hcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         124 HDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       124 H~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      +...+ +|+|++|.|||++.++ ++++||+.+..
T Consensus       230 ~~~~l-iHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQAL-IHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEE-ECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeE-EecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            34455 9999999999998776 99999998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=93.56  E-value=0.0099  Score=54.48  Aligned_cols=29  Identities=10%  Similarity=0.516  Sum_probs=26.2

Q ss_pred             cccccccceeeeccccceeeeeecccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      +.+.+|+++|++|+|||||+++.+|.+..
T Consensus        48 ~~~~~E~~il~~l~HpnIV~~~~~~~~~~   76 (299)
T 4g31_A           48 EKVMREVKALAKLEHPGIVRYFNAWLEKN   76 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEEEEC
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEecC
Confidence            56889999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=93.18  E-value=0.015  Score=53.34  Aligned_cols=28  Identities=4%  Similarity=0.284  Sum_probs=25.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        60 ~~f~~E~~il~~l~HpnIV~l~g~~~~~   87 (299)
T 4asz_A           60 KDFHREAELLTNLQHEHIVKFYGVCVEG   87 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            5688999999999999999999887765

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=93.00  E-value=0.023  Score=53.06  Aligned_cols=29  Identities=3%  Similarity=0.256  Sum_probs=25.8

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+.+|++|+|||||+++..|.+.
T Consensus       115 ~~~~~~Ei~il~~l~HpnIV~l~~~~~~~  143 (346)
T 4fih_A          115 RELLFNEVVIMRDYQHENVVEMYNSYLVG  143 (346)
T ss_dssp             GGGGHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            36688999999999999999999988766

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=92.92  E-value=0.022  Score=52.49  Aligned_cols=28  Identities=11%  Similarity=0.278  Sum_probs=25.2

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        77 ~~~~~E~~il~~l~HpnIv~l~~~~~~~  104 (311)
T 4aw0_A           77 PYVTRERDVMSRLDHPFFVKLYFTFQDD  104 (311)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            5688999999999999999999888766

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=92.90  E-value=0.049  Score=49.90  Aligned_cols=28  Identities=4%  Similarity=0.033  Sum_probs=19.6

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ..+.+|+.+|++|+|||||+++..+.+.
T Consensus        71 ~~~~~E~~il~~l~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           71 VRTKMERDILVEVNHPFIVKLHYAFQTE   98 (304)
T ss_dssp             C------CCCCCCCCTTEECEEEEEEET
T ss_pred             HHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            4678899999999999999999887765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=92.72  E-value=0.019  Score=53.41  Aligned_cols=28  Identities=7%  Similarity=0.350  Sum_probs=25.1

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        88 ~~f~~E~~il~~l~HpnIV~l~g~~~~~  115 (329)
T 4aoj_A           88 QDFQREAELLTMLQHQHIVRFFGVCTEG  115 (329)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            5688999999999999999999887765

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=92.39  E-value=0.034  Score=53.43  Aligned_cols=29  Identities=3%  Similarity=0.256  Sum_probs=25.7

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+.+|++|+|||||+++.++.+.
T Consensus       192 ~~~~~~Ei~il~~l~HpnIV~l~~~~~~~  220 (423)
T 4fie_A          192 RELLFNEVVIMRDYQHENVVEMYNSYLVG  220 (423)
T ss_dssp             GGGHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEEEC
Confidence            35688999999999999999999988765

>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}

Probab=91.54  E-value=0.85  Score=40.52  Aligned_cols=61  Identities=18%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             cCceEEEeecccchhh-hhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccC
Q psy6828         219 FDSVTIYFSDIVGFTA-MSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSG  279 (392)
Q Consensus       219 ~~~vtvlf~DI~~ft~-l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g  279 (392)
                      ...+++...|+.++|. .....++-+......+++..+.+.+++++|...-.-||-||+++.
T Consensus       129 dsqIaVahiDI~d~t~~~t~~~s~yd~~~~~l~l~~~Ll~y~~~igG~lf~iGgdny~iftt  190 (268)
T 2qv6_A          129 DGYVQIAHIDINNITGTLTDIVSAYDTYLNVNKVKLALMEELLKYNALLFFIGGDNFMAPSN  190 (268)
T ss_dssp             SCCEEEEEEEETTHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTTCCCEEEETTEEEEECT
T ss_pred             cCceEEEEEEecCccccccccCChHHHHHHHHHHHHHHHHHHHHhCCEEEEECCCEEEEEeC
Confidence            4678999999999998 455568999999999999999999999999998888999988763

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=91.44  E-value=0.04  Score=49.73  Aligned_cols=28  Identities=11%  Similarity=0.210  Sum_probs=24.7

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        58 ~~~~~Ei~il~~l~HpnIv~~~~~~~~~   85 (275)
T 3hyh_A           58 GRIEREISYLRLLRHPHIIKLYDVIKSK   85 (275)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            4678999999999999999999887665

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=91.35  E-value=0.031  Score=51.39  Aligned_cols=28  Identities=0%  Similarity=-0.005  Sum_probs=25.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        74 ~~f~~E~~il~~l~HpNIV~l~g~~~~~  101 (308)
T 4gt4_A           74 EEFRHEAMLRARLQHPNVVCLLGVVTKD  101 (308)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence            5688999999999999999999887665

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=90.38  E-value=0.041  Score=50.50  Aligned_cols=26  Identities=4%  Similarity=0.087  Sum_probs=22.8

Q ss_pred             cccccccceeeeccccceeeeeeccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWF   37 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~   37 (392)
                      +.+.+|+.+|++|+|||||+++..+.
T Consensus        77 ~~f~~E~~il~~l~HpNIV~l~g~~~  102 (307)
T 3omv_A           77 QAFRNEVAVLRKTRHVNILLFMGYMT  102 (307)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            57889999999999999999987543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=90.31  E-value=0.13  Score=45.63  Aligned_cols=29  Identities=21%  Similarity=0.333  Sum_probs=25.3

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++.++..-|+||+.+..
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            48999999999999877778999998764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=89.89  E-value=0.093  Score=48.77  Aligned_cols=26  Identities=0%  Similarity=0.022  Sum_probs=22.7

Q ss_pred             cccccceeeeccccceeeeeeccccc
Q psy6828          14 ILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        14 ~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ..+|+.+|++|+|||||+++..+.+.
T Consensus        97 ~~~E~~il~~l~HpnIV~l~~~~~~~  122 (336)
T 4g3f_A           97 RVEELVACAGLSSPRIVPLYGAVREG  122 (336)
T ss_dssp             CTHHHHTTTTCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            35899999999999999998877655

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=89.65  E-value=0.14  Score=46.75  Aligned_cols=28  Identities=21%  Similarity=0.179  Sum_probs=24.3

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccch
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      ++|+|+.|.|||++.++.+.++||+.+.
T Consensus       189 liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          189 VIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cCCCCCCccCEEEeCCceEEEecchhcc
Confidence            3999999999999887666899998765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=89.62  E-value=0.22  Score=45.74  Aligned_cols=29  Identities=24%  Similarity=0.195  Sum_probs=25.1

Q ss_pred             ccccCCCCCceEEcCC----ceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSR----WVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~----~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++.+    +.+.++||+.+..
T Consensus       185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             EECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            4999999999999874    6789999998754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=89.26  E-value=0.39  Score=43.86  Aligned_cols=27  Identities=26%  Similarity=0.263  Sum_probs=23.3

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|++|.|||++ + .+.++||+.+..
T Consensus       197 l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          197 RLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             ECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            38999999999998 4 889999987653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=89.21  E-value=0.075  Score=50.65  Aligned_cols=28  Identities=11%  Similarity=0.090  Sum_probs=24.5

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+++|+++|+.|+|||||+++..+...
T Consensus        98 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~  125 (398)
T 4b99_A           98 KRTLRELKILKHFKHDNIIAIKDILRPT  125 (398)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             HHHHHHHHHHHhcCCCCcceEeeeeecc
Confidence            5678999999999999999998877654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=88.75  E-value=0.18  Score=46.87  Aligned_cols=29  Identities=17%  Similarity=0.265  Sum_probs=24.4

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++++..+.|+||+.+..
T Consensus       224 l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          224 LLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             EECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             EEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            49999999999998655578999998753

>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*

Probab=88.32  E-value=2.5  Score=35.33  Aligned_cols=59  Identities=8%  Similarity=0.082  Sum_probs=47.0

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ...++++.||.+|..+......+..-.+|..+-..+...+...+..+-.+-||.+++++
T Consensus        60 ~~~~l~~idid~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~~~~~~~R~~~d~F~il~  118 (206)
T 3i5c_A           60 SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVL  118 (206)
T ss_dssp             CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTCCSTTCEEEEEETTEEEEEE
T ss_pred             CcEEEEEEECcchhHHHhccChhHHHHHHHHHHHHHHHhcCCCCcEEEEecCCeEEEEE
Confidence            45689999999999999888888888888887777777665566677788888886554

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=88.09  E-value=0.5  Score=45.83  Aligned_cols=14  Identities=29%  Similarity=0.287  Sum_probs=13.1

Q ss_pred             ccccCCCCCceEEc
Q psy6828         129 RYHGNLKASNCLVD  142 (392)
Q Consensus       129 iiHrDlKp~NIll~  142 (392)
                      ++|.|+.+.|||++
T Consensus       292 ~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          292 LCHCDLLSSNIINT  305 (458)
T ss_dssp             EECSCCCGGGEEEC
T ss_pred             EEecCCCCCcEEee
Confidence            48999999999998

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=87.17  E-value=0.42  Score=41.26  Aligned_cols=89  Identities=12%  Similarity=-0.017  Sum_probs=56.5

Q ss_pred             HHhhcCCcCCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCCceEEEeccccchh----ccccc------c
Q psy6828          95 DIMENEDVKLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSRWVVKLADFGLTEF----KRDAE------Y  163 (392)
Q Consensus        95 ~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~----~~~~~------~  163 (392)
                      ++|+..+.++++++++.++.|.+.+|.-+- .+.. ..+=..|..|++..+|.+...+ ..+..    .....      .
T Consensus        37 eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~~~~~~~~~pe~~~~~~t  114 (229)
T 2yle_A           37 EILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP-RHRVRSAAQIRVWRDGAVTLAP-AADDAGEPPPVAGKLGYSQCM  114 (229)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC-CCCCCSGGGEEEETTSCEEECC-C------------CCSSSSSC
T ss_pred             HHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC-CceecCCcceEEecCCceeccc-ccccccccCCCChhhccccch
Confidence            344444558999999999999999987652 2222 3344567899999999988774 33211    11111      1


Q ss_pred             ccccccceeeeeeeccCCCCcc
Q psy6828         164 TGTDQHSFLQHTYHVNRAGSTE  185 (392)
Q Consensus       164 ~~~d~~s~g~~~~~~~~~~~~~  185 (392)
                      ...-|||+|+++|.+-.|.-.+
T Consensus       115 e~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A          115 ETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCc
Confidence            2236899999999865555443

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=86.85  E-value=0.56  Score=42.35  Aligned_cols=28  Identities=18%  Similarity=0.218  Sum_probs=23.7

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.||+ ..++.+.++||..+..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            499999999999 5667789999987653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=85.59  E-value=0.62  Score=43.04  Aligned_cols=29  Identities=21%  Similarity=0.325  Sum_probs=25.5

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.||+++.++.+.++||+.+..
T Consensus       208 ~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          208 LCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             eEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            49999999999999888899999977653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=85.50  E-value=0.21  Score=50.00  Aligned_cols=28  Identities=4%  Similarity=0.208  Sum_probs=25.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|+.|+|||||+++..+.+.
T Consensus       199 ~~~~~Ei~il~~l~hpnIv~l~~~~~~~  226 (573)
T 3uto_A          199 ETVRKEIQTMSVLRHPTLVNLHDAFEDD  226 (573)
T ss_dssp             HHHHHHHHHHHHTCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            5678999999999999999999888765

>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}

Probab=85.41  E-value=2.4  Score=35.21  Aligned_cols=57  Identities=16%  Similarity=0.138  Sum_probs=42.7

Q ss_pred             ceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         221 SVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       221 ~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      .+++++.||-+|..+-....-..--.+|..+=+.+...+.. +..+-.+-||.+++++
T Consensus        33 ~~~l~~iDiD~FK~INd~~Gh~~GD~vL~~va~~L~~~~~~-~~~v~R~gGDEF~ill   89 (179)
T 3tvk_A           33 NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRD-YETVYRYGGEEFIIIV   89 (179)
T ss_dssp             EEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHTSCT-TSCEEECSSSEEEEEE
T ss_pred             CEEEEEEECCCCcHHHhccCchhHHHHHHHHHHHhHhcCCc-ccEEEEccCCEEEEEc
Confidence            47899999999999887776666666777777777666654 4567788889886654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=84.30  E-value=0.53  Score=45.14  Aligned_cols=29  Identities=24%  Similarity=0.360  Sum_probs=23.4

Q ss_pred             ccccCCCCCceEEcCC----------------------------ceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSR----------------------------WVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~----------------------------~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++.+                            +.+.++||..+..
T Consensus       251 ~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~  307 (429)
T 1nw1_A          251 FCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY  307 (429)
T ss_dssp             EECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred             EEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence            4899999999999875                            6789999987653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=84.22  E-value=0.46  Score=44.35  Aligned_cols=28  Identities=25%  Similarity=0.518  Sum_probs=23.1

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|++|.|||++.++ +.++||..+..
T Consensus       214 l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          214 FCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            48999999999997654 89999987753

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}

Probab=83.97  E-value=0.71  Score=39.99  Aligned_cols=44  Identities=41%  Similarity=0.612  Sum_probs=35.6

Q ss_pred             ccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhc
Q psy6828         291 GNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFT  338 (392)
Q Consensus       291 ~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~  338 (392)
                      ..++.+++|++||+||++||+    +..+..+|.+++...++.++.++
T Consensus        53 ~~~~g~v~k~~GD~~ma~fg~----p~~~~~~a~~a~~~al~~~~~~~   96 (225)
T 3uvj_A           53 GELDVYKVETIGDAYCVAGGL----HKESDTHAVQIALMALKMMELSD   96 (225)
T ss_dssp             HHHTCEEECCSTTCEEEEESS----SSCCTTHHHHHHHHHHHHHHHHT
T ss_pred             HhcCeEEEEeeCcEEEEEECC----CCCchHHHHHHHHHHHHHHHHHH
Confidence            446678899999999999986    77777888888887777777753

>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A

Probab=82.82  E-value=9.3  Score=36.19  Aligned_cols=59  Identities=8%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhc---CeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNY---DVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~---~g~~~~~~Gd~~~a~~  278 (392)
                      ....+++.||.+|..+......+..-.+|..+-..+...+..+   +..+-.+-||.++.+.
T Consensus        47 ~~~~l~~idid~fk~iNd~~G~~~gD~lL~~va~~L~~~~~~~~~~~~~v~R~ggdeF~ill  108 (430)
T 3pjx_A           47 SSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIRGGEFAVLA  108 (430)
T ss_dssp             SCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTSGGGTTCEEEEETTEEEEEE
T ss_pred             CceEEEEEEchhhhHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCcCceEEEecCceEEEEe
Confidence            4567999999999999888888888888888877887777664   5667788889886554

>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}

Probab=82.66  E-value=3.5  Score=33.39  Aligned_cols=58  Identities=10%  Similarity=0.154  Sum_probs=43.0

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ...++++.||.+|..+......+..-.+|..+-..+...+.. +..+-.+-||.++.++
T Consensus        43 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~~a~~L~~~~~~-~~~~~R~~~d~F~ill  100 (177)
T 3hva_A           43 KPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGE-EADLARFGDSIFAALF  100 (177)
T ss_dssp             CCEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GCEEEECSSSEEEEEE
T ss_pred             CCeEEEEEeCCCHHHHHHHhCchhHHHHHHHHHHHHHHhCCC-CceEEEecCCeEEEEe
Confidence            456899999999999988877777777777777777766654 4556677777775553

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=81.62  E-value=0.24  Score=45.03  Aligned_cols=29  Identities=10%  Similarity=0.517  Sum_probs=25.5

Q ss_pred             cccccccceeeeccccceeeeeecccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      +.+.+|+++|++|+|||||+++..|.+..
T Consensus        49 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B           49 EKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            56789999999999999999999886653

>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}

Probab=81.20  E-value=5.8  Score=32.04  Aligned_cols=58  Identities=9%  Similarity=0.080  Sum_probs=43.2

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ...++++.||.+|..+......+..-.+|..+-..+...+.. +..+-.+-||.++.++
T Consensus        38 ~~~~l~~i~id~f~~in~~~G~~~gd~~L~~ia~~L~~~~~~-~~~~~R~~~d~F~ill   95 (177)
T 3ign_A           38 QATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQ-SDSAGRYGGEEFGIIL   95 (177)
T ss_dssp             CCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTSCT-TSEEEECSSSEEEEEE
T ss_pred             CceEEEEEEchhhHHHHHhhChHHHHHHHHHHHHHHHHhCCC-CCEEEEecCCeEEEEe
Confidence            456899999999999988888877777777777777766644 3456677777775443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	392
d1azsb_	199	d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {	1e-29
d1fx2a_	235	d.58.29.1 (A:) Receptor-type monomeric adenylyl cy	2e-27
d1wc1a_	197	d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p	2e-20
d1azsa_	190	d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D	2e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-11
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-08
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-07
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-06
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-04
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.001
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.004

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  111 bits (278), Expect = 1e-29
 Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 30/178 (16%)

Query: 217 ESFDSVTIYFSDIVGFTAMSAES----TPLQVVDFLNDLYTCFDSI---VGNYDVYKVET 269
           +S+D V + F+ I  F     ES      L+ +  LN++   FD +        V K++T
Sbjct: 2   QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61

Query: 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLD 329
           IG  YM  +GL     ++HA                             H G +   +  
Sbjct: 62  IGSTYMAATGLSAIPSQEHAQE---------------------PERQYMHIGTMVEFAYA 100

Query: 330 LLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTG 387
           L+  +           D KLR+GI+ GPV AGV+G + P+Y ++G+TVN ASRM+STG
Sbjct: 101 LVGKLDAINKHSFN--DFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 156

>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]

 Score =  106 bits (266), Expect = 2e-27
 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 7/176 (3%)

Query: 213 SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGD 272
               E  D VT+ F+DI   TA+   + P  + D +   +    S++G Y  Y+V+T+GD
Sbjct: 4   RAPKEPTDPVTLIFTDIESSTALW-AAHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGD 62

Query: 273 AYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLE 332
           ++M+ S  P     Q A      +     G   +           +              
Sbjct: 63  SFMIASKSPFAA-VQLAQELQLCFLHHDWGTNALD----DSYREFEEQRAEGECEYTPPT 117

Query: 333 AVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           A     V  R  + L++R+GIH+G        +    Y  +G T N A+R ES   
Sbjct: 118 AHMDPEVYSRLWNGLRVRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVAN 172

>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]

 Score = 86.2 bits (212), Expect = 2e-20
 Identities = 37/169 (21%), Positives = 56/169 (33%), Gaps = 23/169 (13%)

Query: 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281
           +TI FSDIVGFT MS       V + LN+        V        + +GDA M + G P
Sbjct: 8   ITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAP 67

Query: 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRH 341
                                           R        + ++        +R  V  
Sbjct: 68  EEMSPSEQ----------------------VRRAIATARQMLVALEKLNQGWQERGLVGR 105

Query: 342 RPHDDLKLRIGIHSGPVCAGVVG-LKMPRYCLFGDTVNTASRMESTGED 389
                ++ R GIH G    G+ G  +   +   G +VN A+R++     
Sbjct: 106 NEVPPVRFRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAP 154

>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 34/175 (19%)

Query: 214 VEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDA 273
           +  +  D+V+I F+DI GFT+++++ T  ++V  LN+L+  FD +       +++ +GD 
Sbjct: 7   IYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDC 66

Query: 274 YMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEA 333
           Y  VSGLP    +                                       M +D++EA
Sbjct: 67  YYCVSGLPEARADHA--------------------------------HCCVEMGMDMIEA 94

Query: 334 VKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGE 388
           +         + +  +R+GIHSG V  GV+GL+  ++ ++ + V  A+ ME+ G+
Sbjct: 95  ISLVREMTGVNVN--MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGK 147

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 3e-12
 Identities = 33/174 (18%), Positives = 51/174 (29%), Gaps = 43/174 (24%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
             + A K I  KS +       E+ I                                  
Sbjct: 37  SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 96

Query: 95  -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
             +M   +  L    I  +    L  + YLHD+ +  H +LKA N L      +KLADFG
Sbjct: 97  DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFG 155

Query: 154 L-TEFKRDAEYTGTD--QHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEML 200
           +  +  R  +   +      ++     +           K D       L EM 
Sbjct: 156 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 209

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.8 bits (149), Expect = 2e-11
 Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 5/131 (3%)

Query: 74  IKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGN 133
           ++ +   +V          +  +       L       +   +  GM YL +     H +
Sbjct: 107 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF-VHRD 165

Query: 134 LKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE 193
           L   NCLV    VVK+ADFGL+     A+Y   D +  +   +    +        + D 
Sbjct: 166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDV 225

Query: 194 ----ALLFEML 200
                +L+E+ 
Sbjct: 226 WAYGVVLWEIF 236

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 1e-10
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             +   + K + + +  +     +GM YLH  ++  H +LK++N  +     VK+ DFGL
Sbjct: 92  HHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL 150

Query: 155 TEFKRDAEYTGTDQH---SFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
              K     +   +    S L     V R         + D      +L+E++
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (143), Expect = 1e-10
 Identities = 28/171 (16%), Positives = 50/171 (29%), Gaps = 41/171 (23%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
               A+K + + ++++     KE  +                                  
Sbjct: 42  SLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 100

Query: 95  --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
              + E    ++  + +  +   I   M YL       H +L A NCLV    +VK+ADF
Sbjct: 101 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADF 159

Query: 153 GLTEFKRDAEY---TGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEML 200
           GL+       Y    G            +     +          LL+E+ 
Sbjct: 160 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.2 bits (143), Expect = 2e-10
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 45/175 (25%)

Query: 69  GRIFAIKRIPKKSVDITRAMK---KELKI------------------------------- 94
             + AIK++           +   KE++                                
Sbjct: 40  SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG 99

Query: 95  ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
              D++E     L  + IA++    L+G+ YLH   +  H ++KA N L+    +VKL D
Sbjct: 100 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGD 158

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEMLPR 202
           FG            +   +       V  A        K D         E+  R
Sbjct: 159 FGSA---SIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 35/131 (26%)

Query: 69  GRIFAIKRIPKKSVDITRA-MKKELKI--------------------------DIMENED 101
           G + A K I  +     R  + +EL++                          + M+   
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 90

Query: 102 V--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
           +        ++    +  +   +++G+ YL +     H ++K SN LV+SR  +KL DFG
Sbjct: 91  LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG 150

Query: 154 LTEFKRDAEYT 164
           ++    D+   
Sbjct: 151 VSGQLIDSMAN 161

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 4e-10
 Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 42/171 (24%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI----------------------DIME-------- 98
               A+K + + S+    A   E  +                       I E        
Sbjct: 37  HTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLV 95

Query: 99  -----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                   +KL    +  + A I  GM ++ +     H +L+A+N LV      K+ADFG
Sbjct: 96  DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFG 154

Query: 154 LTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
           L     D EYT   + +     +    A +  +   K D      LL E++
Sbjct: 155 LARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 5e-10
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 36/133 (27%)

Query: 69  GRIFAIKRIPKK-SVDITRAMKKELKID-----------------------IME------ 98
               A+K +  K +VD    +KKE+ I+                        +E      
Sbjct: 30  EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89

Query: 99  -----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                  D+ +           ++ G++YLH      H ++K  N L+D R  +K++DFG
Sbjct: 90  LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIKPENLLLDERDNLKISDFG 148

Query: 154 LTEFKRDAEYTGT 166
           L    R       
Sbjct: 149 LATVFRYNNRERL 161

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 6e-10
 Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 5/138 (3%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSAL 128
           G +    R  ++         +  K    E +   L    +      + +GM +L   + 
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185

Query: 129 RYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYH----VNRAGST 184
             H +L A N LV    VVK+ DFGL              ++ L   +     +     T
Sbjct: 186 -VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 244

Query: 185 ESLHCKCDEALLFEMLPR 202
                     LL+E+   
Sbjct: 245 IKSDVWSYGILLWEIFSL 262

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-10
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  + A I  GM Y+       H +L+A+N LV    V K+ADFGL     D EYT   Q
Sbjct: 115 LVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-Q 172

Query: 169 HSFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
            +     +    A        K D      LL E+ 
Sbjct: 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.5 bits (138), Expect = 7e-10
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 8/99 (8%)

Query: 109 IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168
           +  ++  I  GM YL D     H +L A N LV+S  V K++DFGL+ F  D     T  
Sbjct: 130 LVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 188

Query: 169 HSFLQHT---YHVNRAGSTESLHCKCD----EALLFEML 200
            +        +    A          D      +++E++
Sbjct: 189 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 227

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 1e-09
 Identities = 24/159 (15%), Positives = 43/159 (27%), Gaps = 49/159 (30%)

Query: 65  GIYKGRIFAIKRIPKKSVDITRAMKKELKIDIM---------------ENEDVKLDNMFI 109
           G ++G   A+K    +     R+  +E +I                    ++     +++
Sbjct: 22  GKWRGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78

Query: 110 ------------------------ASLVADILRGMLYLHDSALRY-------HGNLKASN 138
                                     L      G+ +LH   +         H +LK+ N
Sbjct: 79  VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138

Query: 139 CLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYH 177
            LV       +AD GL      A  T     +    T  
Sbjct: 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 2e-09
 Identities = 35/187 (18%), Positives = 59/187 (31%), Gaps = 42/187 (22%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPKKSVDITRA-MKKELKI--------------------- 94
           Y  +       K    AIK +     +  R     E  I                     
Sbjct: 24  YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 83

Query: 95  --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCL 140
                           +  +D +   + +  ++  I  GM YL +     H +L A N L
Sbjct: 84  MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNIL 142

Query: 141 VDSRWVVKLADFGLTE-FKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EAL 195
           V+S  V K++DFGL+   + D E T T     +   +    A S        D      +
Sbjct: 143 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV 202

Query: 196 LFEMLPR 202
           ++E++  
Sbjct: 203 MWEVMTY 209

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 6e-09
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 38/132 (28%)

Query: 69  GRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN 99
             I A+K + K  +    +   +++E++I                          +    
Sbjct: 31  KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 90

Query: 100 EDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
             V        K D    A+ + ++   + Y H   +  H ++K  N L+ S   +K+AD
Sbjct: 91  GTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV-IHRDIKPENLLLGSAGELKIAD 149

Query: 152 FGLTEFKRDAEY 163
           FG +     +  
Sbjct: 150 FGWSVHAPSSRR 161

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 54/182 (29%)

Query: 69  GRIFAIKRIPKKSVD--ITRAMKKELKI----------------------------DIME 98
           G+I   K +   S+     + +  E+ +                            +  E
Sbjct: 29  GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 88

Query: 99  NEDVK------------LDNMFIASLVADILRGMLYLHDSALRY----HGNLKASNCLVD 142
             D+             LD  F+  ++  +   +   H  +       H +LK +N  +D
Sbjct: 89  GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148

Query: 143 SRWVVKLADFGL-TEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLF 197
            +  VKL DFGL      D  +      +     Y      +  S + K D      LL+
Sbjct: 149 GKQNVKLGDFGLARILNHDTSFAKAFVGTP---YYMSPEQMNRMSYNEKSDIWSLGCLLY 205

Query: 198 EM 199
           E+
Sbjct: 206 EL 207

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 23/173 (13%), Positives = 52/173 (30%), Gaps = 46/173 (26%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
            + +  K +  K  D     KKE+ I                                  
Sbjct: 30  KKTYMAKFVKVKGTDQVLV-KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88

Query: 95  -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLAD 151
            + +     +L+   I S V  +   + +LH   +  H +++  N +  +R    +K+ +
Sbjct: 89  FERINTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIE 147

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEML 200
           FG     +  +       +     Y+       + +    D      L++ +L
Sbjct: 148 FGQARQLKPGDNFRLLFTA---PEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 3e-08
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           IME++++ LD   + S    + +GM +L       H +L A N L+    + K+ DFGL 
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNILLTHGRITKICDFGLA 192

Query: 156 EFKRDAEYTGTDQHS-----FLQHTYHVNRAGSTESLHCKCDEALLFEML 200
              ++        ++     ++      N   + ES         L+E+ 
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG-IFLWELF 241

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 35/179 (19%), Positives = 55/179 (30%), Gaps = 49/179 (27%)

Query: 65  GIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------DIM 97
           G Y+G   A+K I   +    +A   E  +                           + M
Sbjct: 26  GDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83

Query: 98  ENEDVK----------LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
               +           L    +     D+   M YL  +    H +L A N LV    V 
Sbjct: 84  AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVA 142

Query: 148 KLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTE----SLHCKCDEALLFEMLPR 202
           K++DFGLT+     + TG     +        +  ST+    S        LL+E+   
Sbjct: 143 KVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGI-----LLWEIYSF 196

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-08
 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             +  +  ++    +A L+  +  GM YL +     H +L A N L+ +R   K++DFGL
Sbjct: 97  KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGL 155

Query: 155 TEFKRDAEYTGTDQHSFLQ-HTYHVNRAGSTESLHCKCD----EALLFEML 200
           ++     +   T + +      ++     +      + D       ++E L
Sbjct: 156 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 206

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 3e-08
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 6/112 (5%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
             ++     LD   +      +   + YL       H ++ A N LV S   VKL DFGL
Sbjct: 96  SFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL 154

Query: 155 TEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EALLFEMLPR 202
           + +  D+ Y    +       +    + +        D       ++E+L  
Sbjct: 155 SRYMEDSTYYKASKGKLPIK-WMAPESINFRRFTSASDVWMFGVCMWEILMH 205

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 3e-08
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 40/185 (21%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPK-KSVDITRAMKKELKI--------------------- 94
           Y  ++ P G       AIK + +  S    + +  E  +                     
Sbjct: 26  YKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV 85

Query: 95  -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV 141
                        D +      + + ++ +    I +GM YL D  L  H +L A N LV
Sbjct: 86  QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLV 144

Query: 142 DSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYH----VNRAGSTESLHCKCDEALLF 197
            +   VK+ DFGL +     E     +   +   +     +     T           ++
Sbjct: 145 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 204

Query: 198 EMLPR 202
           E++  
Sbjct: 205 ELMTF 209

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 4e-08
 Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 40/169 (23%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI-------------DIMENED-------------- 101
           G+  AI+++  +       +  E+ +             D     D              
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Query: 102 ------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
                   +D   IA++  + L+ + +LH + +  H ++K+ N L+     VKL DFG  
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFC 163

Query: 156 EFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEML 200
                 +   +         +      + ++   K D      +  EM+
Sbjct: 164 AQITPEQSKRSTMVGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 52/183 (28%)

Query: 69  GRIFAIKRIPKKSV---------DITRAMKKELKID------------------------ 95
            + +A+K I              ++  A  KE+ I                         
Sbjct: 28  CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 87

Query: 96  IME-----------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR 144
           + +            E V L       ++  +L  +  LH   +  H +LK  N L+D  
Sbjct: 88  VFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI-VHRDLKPENILLDDD 146

Query: 145 WVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAG---STESLHCKCDE----ALLF 197
             +KL DFG +      E       +       +       +      + D      +++
Sbjct: 147 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 206

Query: 198 EML 200
            +L
Sbjct: 207 TLL 209

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 5e-08
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 37/134 (27%)

Query: 68  KGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94
                AIK I + ++       +E ++                                 
Sbjct: 28  NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 86

Query: 95  --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
             D +  +        +  +  D+  GM YL ++ +  H +L A NCLV    V+K++DF
Sbjct: 87  LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDF 145

Query: 153 GLTEFKRDAEYTGT 166
           G+T F  D +YT +
Sbjct: 146 GMTRFVLDDQYTSS 159

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 7e-08
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 88  MKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
           ++ +    I  +    L +  +    AD+ RGM YL       H +L A N LV   +V 
Sbjct: 108 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVA 166

Query: 148 KLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
           K+ADFGL+  +         +       +    + +        D      LL+E++
Sbjct: 167 KIADFGLSRGQEVYVKKTMGRLPVR---WMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 51.2 bits (122), Expect = 8e-08
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 38/138 (27%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
           G  FA K +          ++KE++                                   
Sbjct: 51  GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 110

Query: 95  -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW--VVKLAD 151
            + + +E  K+        +  + +G+ ++H++    H +LK  N +  ++    +KL D
Sbjct: 111 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLID 169

Query: 152 FGLTEFKRDAEYTGTDQH 169
           FGLT      +       
Sbjct: 170 FGLTAHLDPKQSVKVTTG 187

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 36/138 (26%)

Query: 69  GRIFAIKRIPKKSVD--ITRAMKKELKI----------------------DIME------ 98
            +  A+K +  ++ D  +   +  E  +                       +ME      
Sbjct: 34  VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP 93

Query: 99  -----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
                 ++  + +  I  LV  +  GM YL +S    H +L A N L+ ++   K++DFG
Sbjct: 94  LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFG 152

Query: 154 LTEFKRDAEYTGTDQHSF 171
           L++  R  E     Q   
Sbjct: 153 LSKALRADENYYKAQTHG 170

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 2e-07
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145
           R      K+   +     L    +      + +GM +L       H +L A N L+  + 
Sbjct: 113 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSEKN 171

Query: 146 VVKLADFGLTEFKRDAEYTGTDQHSFL----QHTYHVNRAGSTESLHCKCDEALLFEML 200
           VVK+ DFGL               + L         +     T          LL+E+ 
Sbjct: 172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 230

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 38/133 (28%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
           GR+F  K I          +K E+ I                                  
Sbjct: 54  GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 113

Query: 95  -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLAD 151
            D +  ED K+    + + +     G+ ++H+ ++  H ++K  N + +++    VK+ D
Sbjct: 114 FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIID 172

Query: 152 FGLTEFKRDAEYT 164
           FGL       E  
Sbjct: 173 FGLATKLNPDEIV 185

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 37/133 (27%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94
               AIK I + S+       +E K+                                  
Sbjct: 28  QYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 86

Query: 95  -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153
            + +     +     +  +  D+   M YL       H +L A NCLV+ + VVK++DFG
Sbjct: 87  LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFG 145

Query: 154 LTEFKRDAEYTGT 166
           L+ +  D EYT +
Sbjct: 146 LSRYVLDDEYTSS 158

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.7 bits (118), Expect = 3e-07
 Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 48/177 (27%)

Query: 69  GRIFAIKRIPKKSV----DITRAMKKELKIDIMENED----VKLDNMF------------ 108
           G+++A+K + KK +      T A+ + + + ++   D    V +   F            
Sbjct: 29  GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 88

Query: 109 --------------------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK 148
                               +    A+I+ G+ ++H+  +  + +LK +N L+D    V+
Sbjct: 89  MNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVR 147

Query: 149 LADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEMLP 201
           ++D GL       +   +           + +  + +S     D      +LF++L 
Sbjct: 148 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS---SADWFSLGCMLFKLLR 201

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 39/169 (23%)

Query: 69  GRIFAIKRIPKKSV---DITRAMKKELKI-------------DIMENED----------- 101
           GR +A+K + K+ V           E  +                ++             
Sbjct: 29  GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 88

Query: 102 ----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
                      +  N       A++   + YLH   +  + +LK  N L+D    +K+ D
Sbjct: 89  GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI-IYRDLKPENILLDKNGHIKITD 147

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEML 200
           FG  ++  D  YT      ++       +    +S+       L++EML
Sbjct: 148 FGFAKYVPDVTYTLCGTPDYIAPEVVSTK-PYNKSIDWWSFGILIYEML 195

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 5e-07
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 86  RAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145
           R    E   +   N + +L +  + S    + RGM YL       H +L A N LV    
Sbjct: 114 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTEDN 172

Query: 146 VVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
           V+K+ADFGL       +Y     +  L   +    A        + D      LL+E+ 
Sbjct: 173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 6e-07
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           + + NE        +      + +GM +L       H +L A NC++D ++ VK+ADFGL
Sbjct: 118 NFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGL 176

Query: 155 TEFKRDAEYTGTDQHSFLQHT--YHVNRAGSTESLHCKCD----EALLFEMLPR 202
                D E+      +  +    +    +  T+    K D      LL+E++ R
Sbjct: 177 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 9e-07
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 5/122 (4%)

Query: 83  DITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142
           D+   ++                   +  +  +I  GM YL+ +    H +L A NC+V 
Sbjct: 109 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVA 167

Query: 143 SRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFE 198
             + VK+ DFG+T    + +Y        L   +    +          D      +L+E
Sbjct: 168 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 227

Query: 199 ML 200
           + 
Sbjct: 228 IA 229

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 94  IDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRY-HGNLKASNCLVDSR-WVVKLAD 151
           +         +    + S    IL+G+ +LH       H +LK  N  +      VK+ D
Sbjct: 99  LKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 158

Query: 152 FGLTEFKRDAEYTG 165
            GL   KR +    
Sbjct: 159 LGLATLKRASFAKA 172

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-06
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 43/161 (26%)

Query: 69  GRIFAIKRI-PKKSVDITRAMKKELKI-------------DIMENEDV------------ 102
               AIK+I P +     +   +E+KI             DI+    +            
Sbjct: 33  KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHL 92

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                        L N  I   +  ILRG+ Y+H SA   H +LK SN L+++   +K+ 
Sbjct: 93  MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKIC 151

Query: 151 DFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKC 191
           DFGL                ++   ++     + E +    
Sbjct: 152 DFGLARVADPDHDHTGFLTEYVATRWYR----APEIMLNSK 188

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 42/173 (24%)

Query: 69  GRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN 99
            R +AIK + K+ +   +    + +E  +                             +N
Sbjct: 33  SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 92

Query: 100 EDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
            ++          D        A+I+  + YLH   +  H +LK  N L++    +++ D
Sbjct: 93  GELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI-IHRDLKPENILLNEDMHIQITD 151

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEML 200
           FG  +                   Y      + +S     D      ++++++
Sbjct: 152 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 4e-06
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 40/171 (23%)

Query: 69  GRIFAIKRIPKKSVD--ITRAMKKELKI-------DIMENEDVKLDNMF----------- 108
             I A+KR+     D  +  +  +E+ +       +I+   DV   +             
Sbjct: 27  HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD 86

Query: 109 ----------------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
                           + S +  +L+G+ + H   +  H +LK  N L++    +KLA+F
Sbjct: 87  LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANF 145

Query: 153 GLTEFKRDAEYTGTDQ---HSFLQHTYHVNRAGSTESLHCKCDEALLFEML 200
           GL           + +     +            + S+       +  E+ 
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
           D +           ++     +  GM YL  S    H +L A N L+ +R +VK+ DFGL
Sbjct: 99  DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE-SKRFIHRDLAARNLLLATRDLVKIGDFGL 157

Query: 155 TEFKRDAEYTGTDQHSF 171
                  +     Q   
Sbjct: 158 MRALPQNDDHYVMQEHR 174

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 7e-06
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 95  DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
            ++ N  VK     I  ++  +L G+ Y+H + +  H ++KA+N L+    V+KLADFGL
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGL 163

Query: 155 TEFKRDAEYTGTDQHSFLQHT 175
                 A+ +  ++++    T
Sbjct: 164 ARAFSLAKNSQPNRYTNRVVT 184

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 91  ELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VV 147
           EL   I +  D        + ++  I   + YLH   +  H ++K  N L  S+    ++
Sbjct: 95  ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-AHRDVKPENLLYTSKRPNAIL 153

Query: 148 KLADFGLTEFKRDAEYTGTDQHS 170
           KL DFG  +         T  ++
Sbjct: 154 KLTDFGFAKETTSHNSLTTPCYT 176

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 40/139 (28%)

Query: 69  GRIFAIKRIPKKSV-----DITRAMKKELKI----------------------------- 94
            +I AIK+I           I R   +E+K+                             
Sbjct: 23  NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82

Query: 95  -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL 149
                 I+++  + L    I + +   L+G+ YLH   + +  +LK +N L+D   V+KL
Sbjct: 83  ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR-DLKPNNLLLDENGVLKL 141

Query: 150 ADFGLTEFKRDAEYTGTDQ 168
           ADFGL +         T Q
Sbjct: 142 ADFGLAKSFGSPNRAYTHQ 160

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.6 bits (99), Expect = 4e-05
 Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 37/132 (28%)

Query: 69  GRIFAIKRIPKKSVD--ITRAMKKELKI-------------------------------- 94
           G  FA+K+I  +  D  I     +E+ I                                
Sbjct: 26  GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85

Query: 95  --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152
              +++  +  L+++   S +  +L G+ Y HD  +  H +LK  N L++    +K+ADF
Sbjct: 86  LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV-LHRDLKPQNLLINREGELKIADF 144

Query: 153 GLTEFKRDAEYT 164
           GL          
Sbjct: 145 GLARAFGIPVRK 156

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 4e-05
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 99  NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEF 157
                L  +++   +  + R + Y+H   +  H ++K  N L+D    V+KL DFG  + 
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172

Query: 158 KRDAEYTGTDQHSF-------LQHTYHVNRAGSTESLHCKCDEALLFEML 200
               E   +   S        +        +    S  C     +L E+L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC-----VLAELL 217

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 7e-05
 Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 7/135 (5%)

Query: 70  RIFAIKRIPKKSVDITRAMKKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSALR 129
           R+      P   V I    +    +     E   L      S    +L  + + H+  + 
Sbjct: 73  RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV- 131

Query: 130 YHGNLKASNCLVD-SRWVVKLADFGLTEFKRDAEYT---GTDQHSFLQHTYHVNRAGSTE 185
            H ++K  N L+D +R  +KL DFG     +D  YT   GT    +    +         
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT--RVYSPPEWIRYHRYHGR 189

Query: 186 SLHCKCDEALLFEML 200
           S        LL++M+
Sbjct: 190 SAAVWSLGILLYDMV 204

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 37/135 (27%)

Query: 69  GRIFAIKRIPKKSVDITRA-MKKELKI--------------------------DIMENED 101
            ++ AIK I KK+++     M+ E+ +                           ++   +
Sbjct: 34  QKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGE 93

Query: 102 V--------KLDNMFIASLVADILRGMLYLHDSAL--RYHGNLKASNCLVDSRWVVKLAD 151
           +               + L+  +L  + YLHD  +  R           +D    + ++D
Sbjct: 94  LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 153

Query: 152 FGLTEFKRDAEYTGT 166
           FGL++ +       T
Sbjct: 154 FGLSKMEDPGSVLST 168

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 31/178 (17%), Positives = 58/178 (32%), Gaps = 35/178 (19%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELK-----------IDIMENEDVKLD 105
           YS +F  I I       +K +        +   K L+            DI+++   +  
Sbjct: 48  YSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 107

Query: 106 NMF--------------------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR- 144
            +                     I   + +IL+ + Y H   + +  ++K  N ++D   
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHR-DVKPHNVMIDHEH 166

Query: 145 WVVKLADFGLTEFKRDAEYTGTDQHS--FLQHTYHVNRAGSTESLHCKCDEALLFEML 200
             ++L D+GL EF    +       S  F      V+      SL       +L  M+
Sbjct: 167 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 224

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 1e-04
 Identities = 22/171 (12%), Positives = 54/171 (31%), Gaps = 40/171 (23%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELK-IDIMEN---------------------------- 99
           GR +A+K + K+ +     +   +    +++N                            
Sbjct: 30  GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89

Query: 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
                    +            A+I+  + YLH   +  + ++K  N ++D    +K+ D
Sbjct: 90  GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITD 148

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTY--HVNRAGSTESLHCKCDEALLFEML 200
           FGL +       T        ++     +       ++       +++EM+
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 38/155 (24%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELK-IDIME----------------------------- 98
           G  +A+K + K+ V   + ++  L    I++                             
Sbjct: 66  GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125

Query: 99  -------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
                      +          A I+    YLH   L  + +LK  N L+D +  +++ D
Sbjct: 126 GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTD 184

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTES 186
           FG  +  +   +T       L     +++  +   
Sbjct: 185 FGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 28/191 (14%), Positives = 58/191 (30%), Gaps = 48/191 (25%)

Query: 57  YSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------- 94
           +  IF    +   +  AIK  P++S     R   +  K+                     
Sbjct: 18  FGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 77

Query: 95  -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143
                      D+++    K     +A     +L  +  +H+ +L  + ++K  N L+  
Sbjct: 78  LVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL-VYRDIKPDNFLIGR 136

Query: 144 RWV-----VKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHC-----KCDE 193
                   + + DFG+ +F RD        +   ++     R  S  +        + D 
Sbjct: 137 PNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDL 196

Query: 194 ----ALLFEML 200
                +    L
Sbjct: 197 EALGHVFMYFL 207

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 4e-04
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 4/107 (3%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155
           + +  +  +    I  ++  +LRG+ +LH   +  H +LK  N LV S   +KLADFGL 
Sbjct: 105 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLA 163

Query: 156 EFKRDAEYTGTDQHS--FLQHTYHVNRAGSTESLHCKCDEALLFEML 200
                     +   +  +      +  + +T          +  EM 
Sbjct: 164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG-CIFAEMF 209

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 41/172 (23%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKIDIMENED----VKLDNMF---------------- 108
            R  AIK++ +   + T A +   ++ +M+  +    + L N+F                
Sbjct: 42  DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 101

Query: 109 -------------------IASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL 149
                              ++ L+  +L G+ +LH SA   H +LK SN +V S   +K+
Sbjct: 102 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKI 160

Query: 150 ADFGLTEFKRDAEYTGTDQHSFLQHTY-HVNRAGSTESLHCKCDEALLFEML 200
            DFGL      +        +        +   G  E++       ++ EM+
Sbjct: 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 7e-04
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 41/172 (23%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELKIDIME------------------------------ 98
           G   A+K++ +    I  A +   ++ +++                              
Sbjct: 43  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102

Query: 99  ----------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK 148
                      +  KL +  +  L+  ILRG+ Y+H SA   H +LK SN  V+    +K
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-SADIIHRDLKPSNLAVNEDCELK 161

Query: 149 LADFGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDEALLFEML 200
           + DFGL     D          +      +N     +++       ++ E+L
Sbjct: 162 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 8e-04
 Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 45/178 (25%)

Query: 69  GRIFAIKRIPKKSV----DITRAMKKELKI------------------------------ 94
           G+++A+K + K ++      T   + E ++                              
Sbjct: 52  GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 111

Query: 95  -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL 149
                    ++  +     +   V +I+  + +LH   +  + ++K  N L+DS   V L
Sbjct: 112 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI-IYRDIKLENILLDSNGHVVL 170

Query: 150 ADFGLTEFKRDAEYTGTDQHSFLQHTY-HVNRAGSTESLHCKCDE----ALLFEMLPR 202
            DFGL++     E                    G         D      L++E+L  
Sbjct: 171 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 228

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 9e-04
 Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 39/136 (28%)

Query: 69  GRIFAIKRIPKKSVDITRAMKKELK-----------------IDIMENEDV--------- 102
            + FAIK + K  V +   ++  +                      + ++          
Sbjct: 27  NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 86

Query: 103 ------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150
                       K D        A+I+ G+ +LH   +  + +LK  N L+D    +K+A
Sbjct: 87  GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIA 145

Query: 151 DFGLTEFKRDAEYTGT 166
           DFG+ +     +    
Sbjct: 146 DFGMCKENMLGDAKTN 161

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 107 MFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154
                ++  IL  +   +   +  HG+L   N LV     + + DF  
Sbjct: 103 ENPDEVLDMILEEVAKFYHRGI-VHGDLSQYNVLVSE-EGIWIIDFPQ 148

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 5/110 (4%)

Query: 96  IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGL 154
           I + E   +  +++  +   +L G+ Y+H      H ++K  N L++       L    +
Sbjct: 114 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 173

Query: 155 TEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCD----EALLFEML 200
            +      Y     +S     Y            C  D      L+FE++
Sbjct: 174 ADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 47/178 (26%)

Query: 69  GRIFAIKRIPKKSV---DITRAMKKELKI-------------DIMENEDVKLDNMFI--- 109
            R  A+K +              ++E +              D  E E       +I   
Sbjct: 32  HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 91

Query: 110 ----------------------ASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147
                                   ++AD  + + + H + +  H ++K +N ++ +   V
Sbjct: 92  YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAV 150

Query: 148 KLADFGLTEFKRDAEYTGTDQHSFLQ-HTYHVNRAGSTESLHCKCDE----ALLFEML 200
           K+ DFG+     D+  + T   + +    Y        +S+  + D      +L+E+L
Sbjct: 151 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 208

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.004
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 43/173 (24%)

Query: 69  GRIFAIKRIPKKSVD--ITRAMKKELKI-------------DIMENED------------ 101
           G + A+K+I   +    +     +E+ +             D++  E+            
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86

Query: 102 ----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151
                       +    I S +  +L+G+ + H   +  H +LK  N L+++   +KLAD
Sbjct: 87  LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLAD 145

Query: 152 FGLTEFKRDAEYTGTDQHSFLQHTYHVNRAGSTESLHCKCDE----ALLFEML 200
           FGL         T T +   L +          +      D      +  EM+
Sbjct: 146 FGLARAFGVPVRTYTHEVVTLWY-RAPEILLGCKYYSTAVDIWSLGCIFAEMV 197

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	392
d1azsb_	199	Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor	100.0
d1azsa_	190	Adenylyl cyclase VC1, domain C1a {Dog (Canis famil	99.97
d1wc1a_	197	Adenylate cyclase CyaC {Spirulina platensis [TaxId	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.93
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.93
d1fx2a_	235	Receptor-type monomeric adenylyl cyclase {Trypanos	99.93
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.92
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.92
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.92
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.92
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.92
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.92
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.92
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.91
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.91
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.91
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.91
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.91
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.91
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.91
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.9
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.86
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.76
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	97.19
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	96.58
d1azsb_	199	Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor	95.99
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.26
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.08
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.77
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	92.92
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	92.25
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	92.01
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	91.82
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	91.34
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	91.07
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	91.03
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	90.77
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	90.37
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	89.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	89.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	89.72
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	89.58
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	89.51
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	89.5
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	89.27
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	89.26
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	89.09
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	88.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	88.84
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	88.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	88.63
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	88.57
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	88.13
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	87.84
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	87.8
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	87.74
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	87.57
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	87.15
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	86.71
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	86.46
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	86.41
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	86.1
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	85.44
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	85.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	84.2
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	83.87
d1w25a3	162	Response regulator PleD, C-terminal domain {Caulob	82.65
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	82.57
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	81.66
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	81.14

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6e-33  Score=241.42  Aligned_cols=152  Identities=35%  Similarity=0.607  Sum_probs=127.1

Q ss_pred             cccCceEEEeecccchhhhhccCC----hhhHHHhHHHHHHHHHHhhhh---cCeEEEeeeCceeeeccCCCcCCCCccc
Q psy6828         217 ESFDSVTIYFSDIVGFTAMSAEST----PLQVVDFLNDLYTCFDSIVGN---YDVYKVETIGDAYMVVSGLPIRNGEQHA  289 (392)
Q Consensus       217 ~~~~~vtvlf~DI~~ft~l~~~~~----p~~l~~~Ln~~~~~~~~~v~~---~~g~~~~~~Gd~~~a~~g~~~~~~~~~~  289 (392)
                      +.+++++++|+||+|||.++++++    |++++++||++|..|++++.+   |+|+++|++||+|||+||.|....+.++
T Consensus         2 ~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~~~~~Ln~~~~~fd~~~~~~~~~g~~~~k~iGD~~~a~~g~~~~~~~~~a   81 (199)
T d1azsb_           2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHA   81 (199)
T ss_dssp             CEEEEEEEEEEECTTHHHHCCCCTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEESSSCC------
T ss_pred             CCCCcEEEEEEEcCCChHHHHhCCcccCHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCeEEEEecCCCCcccccc
Confidence            567899999999999999998764    678999999999999999877   8999999999999999999865433221


Q ss_pred             cccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCce
Q psy6828         290 VGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPR  369 (392)
Q Consensus       290 ~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~  369 (392)
                      ..                     ......++.+|+.+|++|++.+++++..  ...++++|||||+|+|++|++|.++++
T Consensus        82 ~~---------------------~~~~~~~~~~av~~a~~~~~~~~~~~~~--~~~~l~~rIGIh~G~v~~Gv~g~~~~~  138 (199)
T d1azsb_          82 QE---------------------PERQYMHIGTMVEFAYALVGKLDAINKH--SFNDFKLRVGINHGPVIAGVIGAQKPQ  138 (199)
T ss_dssp             -------------------------CTTHHHHHHHHHHHHHHHHHHHHHHH--HTCCCCCEEEEEEEEEEEEEECSSSCE
T ss_pred             cc---------------------hHHHHHhHHHHHHHHHHHHHHhhhcccc--CCCCeeEEeeeeecCceeeeecccccc
Confidence            10                     0123358999999999999999987643  345799999999999999999998889


Q ss_pred             eeeecchHHHHHhhhhcCCCCC
Q psy6828         370 YCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       370 y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      ||+|||+||+|+|||+.|+||.
T Consensus       139 y~v~Gd~VN~AaRle~~a~~g~  160 (199)
T d1azsb_         139 YDIWGNTVNVASRMDSTGVLDK  160 (199)
T ss_dssp             EEEESHHHHHHHHHHHTCCTTE
T ss_pred             ccccchHHHHHHHHHhcCCCCe
Confidence            9999999999999999999984

>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.97  E-value=2.7e-32  Score=235.86  Aligned_cols=144  Identities=32%  Similarity=0.577  Sum_probs=130.3

Q ss_pred             ccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccc
Q psy6828         214 VEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNY  293 (392)
Q Consensus       214 ~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~  293 (392)
                      ...+.+++++++|+||+|||.+++..+|+++.++||++|..+++++.+|+|+++|++||++||+||.|..          
T Consensus         7 ~~~~~~~~Vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~~~k~~GD~~~a~f~~~~~----------   76 (190)
T d1azsa_           7 IYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEA----------   76 (190)
T ss_dssp             CEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSC----------
T ss_pred             hhhhcCCcEEEEEEEcCChhHHHHhCCHHHHHHHHHHHHHHHhhcccccCccccccceeEEEEEecCCCc----------
Confidence            3556778999999999999999999999999999999999999999999999999999999888887632          


Q ss_pred             cccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeee
Q psy6828         294 DVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLF  373 (392)
Q Consensus       294 ~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~  373 (392)
                                            ..+++.+|+.+|++|++.+++++..  ...++++|||||+|+|++|++|+.+++||+|
T Consensus        77 ----------------------~~d~~~~a~~~a~~~~~~~~~~~~~--~~~~l~~riGih~G~v~~g~~G~~~~~~~~~  132 (190)
T d1azsa_          77 ----------------------RADHAHCCVEMGMDMIEAISLVREM--TGVNVNMRVGIHSGRVHCGVLGLRKWQFDVW  132 (190)
T ss_dssp             ----------------------CSTHHHHHHHHHHHHHHHHHHHHHH--HCSCCEEEEEEEEEEEEEEECSSSSCCCEEE
T ss_pred             ----------------------cccchhHHHHHHHHHHHHHhhhhcc--cccccceEEEEeeecccccccccccccccee
Confidence                                  2358899999999999999987633  3457999999999999999999988899999


Q ss_pred             cchHHHHHhhhhcCCCCC
Q psy6828         374 GDTVNTASRMESTGEDVV  391 (392)
Q Consensus       374 G~~Vn~AsRle~~~~~g~  391 (392)
                      |++||+|+|||+.|+||.
T Consensus       133 G~~Vn~Aarl~~~a~~~~  150 (190)
T d1azsa_         133 SNDVTLANHMEAGGKAGR  150 (190)
T ss_dssp             SHHHHHHHHHHHTCCTTS
T ss_pred             ccceehHHHHhccCCCCE
Confidence            999999999999999984

>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylate cyclase CyaC
species: Spirulina platensis [TaxId: 118562]

Probab=99.97  E-value=4.6e-30  Score=223.29  Aligned_cols=144  Identities=25%  Similarity=0.359  Sum_probs=123.1

Q ss_pred             ccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccc
Q psy6828         218 SFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYK  297 (392)
Q Consensus       218 ~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~  297 (392)
                      +.+.+|++|+||+|||.+++.++|+++.++||++|+.+++++.+|+|+++|++||++|++|+.|...             
T Consensus         4 e~r~vtvlF~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~~~f~~~~~~-------------   70 (197)
T d1wc1a_           4 EPRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEM-------------   70 (197)
T ss_dssp             EEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCC-------------
T ss_pred             ccEEEEEEEEEeCCHHHHHHhCCHHHHHHHHHHHHHHHHhhHhhhhhhceeeccceEEEEecCCccc-------------
Confidence            3468999999999999999999999999999999999999999999999999999999999887432             


Q ss_pred             eeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhccc--------CCCCCCceEEEEeeccceeEeeeccCCc-
Q psy6828         298 VETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVR--------HRPHDDLKLRIGIHSGPVCAGVVGLKMP-  368 (392)
Q Consensus       298 ~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~--------~~~~~~~~~~iGi~~G~v~~g~iG~~~~-  368 (392)
                                       ....++..|+.++..+++++...+..        .....++++|||||+|+|++|++|+..+ 
T Consensus        71 -----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rIGI~~G~v~~g~iG~~~r~  133 (197)
T d1wc1a_          71 -----------------SPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGMAVVGLFGSQERS  133 (197)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSSTTCCCCCEEEEEEEEEEEEEEEECSSSE
T ss_pred             -----------------cchhhhHHHHHHHHHHHHHhhhcccchhcccccccCCCCceEEEEEEEEEEEEeccccccccc
Confidence                             23457778888888877776654321        1223579999999999999999998665 


Q ss_pred             eeeeecchHHHHHhhhhcCCCCC
Q psy6828         369 RYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       369 ~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                      +||+||++||+|||||+.|++|.
T Consensus       134 ~y~~~G~~Vn~AaRle~~a~~~~  156 (197)
T d1wc1a_         134 DFTAIGPSVNIAARLQEATAPNS  156 (197)
T ss_dssp             EEEEESHHHHHHHHHHHHSCTTC
T ss_pred             cccccccHHHHHHHHHhcCCCCE
Confidence            99999999999999999999884

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.1e-28  Score=223.93  Aligned_cols=130  Identities=22%  Similarity=0.348  Sum_probs=108.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +...+.||+|+||+||+|.+..+|+.||||++++... ..+.+.+|+.+                               
T Consensus        19 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   97 (287)
T d1opja_          19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   97 (287)
T ss_dssp             EEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc-hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccC
Confidence            4456789999999999999999999999999976543 35678899988                               


Q ss_pred             ----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-----
Q psy6828          95 ----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-----  164 (392)
Q Consensus        95 ----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-----  164 (392)
                          +++. .....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+........     
T Consensus        98 g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~i-iHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~  176 (287)
T d1opja_          98 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA  176 (287)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTE
T ss_pred             cchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCc-ccCccccCeEEECCCCcEEEccccceeecCCCCceeeccc
Confidence                3333 234479999999999999999999999999 99999999999999999999999999876443211     


Q ss_pred             -------------------cccccceeeeeee
Q psy6828         165 -------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -------------------~~d~~s~g~~~~~  177 (392)
                                         ..|+||||+++|+
T Consensus       177 ~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~e  208 (287)
T d1opja_         177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  208 (287)
T ss_dssp             EECGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             cccccccChHHHcCCCCCchhhhhhHHHHHHH
Confidence                               1289999999988

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.3e-29  Score=228.95  Aligned_cols=115  Identities=19%  Similarity=0.308  Sum_probs=100.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      .++|...+.||+|+||+||+|.+..+|+.||||+++.......+.+.+|+.+                            
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            4467777889999999999999999999999999976655556778999888                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                             +++...  .+++.++..++.||+.||.|||++|+ +||||||+|||++.++.+||+|||+|+....
T Consensus        99 ~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~i-iHrDiKp~NILl~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1          99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             cCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCcHHHeEECCCCcEeeccchhheeecc
Confidence                   332222  59999999999999999999999999 9999999999999999999999999987543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=3.6e-28  Score=225.57  Aligned_cols=134  Identities=22%  Similarity=0.324  Sum_probs=111.1

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      ...|...+.||+|+||+||+|++..+|+.||||++++...   ...+.+.+|+.+                         
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            4557777899999999999999999999999999976543   345678899988                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---  162 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---  162 (392)
                               +.+......+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+......   
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i-iHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV  172 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eccCCCcceEEECCCCCEEEeecccccccCCCCccc
Confidence                     2222233479999999999999999999999999 999999999999999999999999998643211   


Q ss_pred             -------------------cccccccceeeeeee
Q psy6828         163 -------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 -------------------~~~~d~~s~g~~~~~  177 (392)
                                         ....|+||+|+++|+
T Consensus       173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilye  206 (309)
T d1u5ra_         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  206 (309)
T ss_dssp             SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHH
T ss_pred             cCccccCHHHHhccCCCCcCchhhhhhHHHHHHH
Confidence                               112489999999998

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.6e-28  Score=221.13  Aligned_cols=130  Identities=25%  Similarity=0.338  Sum_probs=105.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------HHhhc
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------DIMEN   99 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------~~l~~   99 (392)
                      .+...+.||+|+||+||+|.+ .+++.||||+++..... .+.+.+|+.+                         +|+.+
T Consensus        14 ~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~-~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~   91 (272)
T d1qpca_          14 TLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN   91 (272)
T ss_dssp             GEEEEEEEEEETTEEEEEEEE-TTTEEEEEEEECTTSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             HeEEeEEEecCCCcEEEEEEE-CCCCEEEEEEEccCcCC-HHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCC
Confidence            455567899999999999985 46789999999765543 4678899888                         22222


Q ss_pred             CC----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-----
Q psy6828         100 ED----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-----  164 (392)
Q Consensus       100 ~~----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-----  164 (392)
                      ++          ..+++.++..++.||+.||.|||++++ +||||||+|||+++++.+||+|||+|+........     
T Consensus        92 g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~i-vHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (272)
T d1qpca_          92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA  170 (272)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCccchhheeeecccceeeccccceEEccCCcccccccc
Confidence            21          148999999999999999999999999 99999999999999999999999999876432211     


Q ss_pred             -------------------cccccceeeeeee
Q psy6828         165 -------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -------------------~~d~~s~g~~~~~  177 (392)
                                         .+|+||||+++||
T Consensus       171 ~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~e  202 (272)
T d1qpca_         171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (272)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CCcccccChHHHhCCCCCchhhhhhhHHHHHH
Confidence                               1299999999998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.5e-29  Score=227.36  Aligned_cols=114  Identities=25%  Similarity=0.272  Sum_probs=100.3

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      +.|...+.||+|+||+||+|.+..+|+.||||++++......+.+.+|+.+                             
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            446666789999999999999999999999999987766667788889888                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                            +++.+....+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+..
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~i-vHrDiKp~NIll~~~~~~Kl~DFG~a~~~  160 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKN  160 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-EEeecChhheeECCCCCEEEEechhhhcc
Confidence                  4444444469999999999999999999999999 99999999999999999999999998643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.4e-28  Score=222.58  Aligned_cols=153  Identities=22%  Similarity=0.261  Sum_probs=113.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+|+.||||++++... ...+.+.+|+.+                              
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccC
Confidence            5556789999999999999999999999999976543 345678889887                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccccc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQH  169 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~  169 (392)
                           +++.. ...+++.++..++.|+++||.|||++++ +||||||+|||++.++.+||+|||+|+.............
T Consensus        87 gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~~I-iHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~  164 (271)
T d1nvra_          87 GGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  164 (271)
T ss_dssp             TEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred             CCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcCC-ccCcccHHHEEECCCCCEEEccchhheeeccCCccccccc
Confidence                 33333 2369999999999999999999999999 9999999999999999999999999987644332222222


Q ss_pred             ceeeeeeeccC----CC-CcccccccccchhhhccC
Q psy6828         170 SFLQHTYHVNR----AG-STESLHCKCDEALLFEML  200 (392)
Q Consensus       170 s~g~~~~~~~~----~~-~~~~~d~~~~~~lL~~~l  200 (392)
                      ..|++.|++||    .. .+.+.|+|+.+.++..++
T Consensus       165 ~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml  200 (271)
T d1nvra_         165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML  200 (271)
T ss_dssp             CCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHH
T ss_pred             eeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHH
Confidence            34556666555    11 123456666666655554

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.9e-28  Score=221.11  Aligned_cols=113  Identities=19%  Similarity=0.327  Sum_probs=96.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+++.||+|++.+...   ...+.+.+|+.+                            
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEee
Confidence            5556789999999999999999999999999975432   235668888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                             +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+....
T Consensus        88 ~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~~i-vHrDiKp~Nill~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          88 APLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred             cCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eeeeeccccceecCCCCEeecccceeeecCC
Confidence                   333322 269999999999999999999999999 9999999999999999999999999986543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=1.7e-27  Score=225.00  Aligned_cols=132  Identities=20%  Similarity=0.229  Sum_probs=112.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||+||+|.+..+|+.||||++++......+.+.+|+.+                              
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            46667889999999999999999999999999988776666788899988                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCceEEEeccccchhccccccc---
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~~kl~DFGla~~~~~~~~~---  164 (392)
                           +++......+++.++..++.||+.||.|||++|+ +||||||+|||++  .++.+||+|||+|+........   
T Consensus       110 gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i-iHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~  188 (352)
T d1koba_         110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT  188 (352)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEE
T ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecccccccccccccCCCeEEEeecccceecCCCCceeec
Confidence                 3344444469999999999999999999999999 9999999999997  5689999999999876443211   


Q ss_pred             -------------------cccccceeeeeee
Q psy6828         165 -------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -------------------~~d~~s~g~~~~~  177 (392)
                                         ..|+||+|+++|+
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  220 (352)
T d1koba_         189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYV  220 (352)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHH
T ss_pred             cCcccccCHHHHcCCCCCCccchHHHHHHHHH
Confidence                               1299999999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.3e-27  Score=213.95  Aligned_cols=126  Identities=21%  Similarity=0.269  Sum_probs=104.5

Q ss_pred             CCCCcceeEEEEEEEee--cCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------------   94 (392)
                      .||+|+||+||+|.++.  ++..||||++++.. ....+.+.+|+.+                                 
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL   95 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcH
Confidence            48999999999997654  45589999997654 3456789999988                                 


Q ss_pred             -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----------
Q psy6828          95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY----------  163 (392)
Q Consensus        95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~----------  163 (392)
                       +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+.......          
T Consensus        96 ~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~i-iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~g  174 (285)
T d1u59a_          96 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW  174 (285)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCC
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCcCchhheeeccCCceeeccchhhhccccccccccccccccc
Confidence             5555555579999999999999999999999999 9999999999999999999999999986533211          


Q ss_pred             ----------------ccccccceeeeeee
Q psy6828         164 ----------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ----------------~~~d~~s~g~~~~~  177 (392)
                                      ..+|+||||+++||
T Consensus       175 t~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E  204 (285)
T d1u59a_         175 PLKWYAPECINFRKFSSRSDVWSYGVTMWE  204 (285)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhCCCCCccchhhcchHHHHH
Confidence                            01299999999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=4.2e-27  Score=217.54  Aligned_cols=131  Identities=24%  Similarity=0.331  Sum_probs=100.1

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +...+.||+|+||+||+|.+..+++   .||||.+..... ...+.+.+|+.+                           
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            3445679999999999999877665   689999876533 456779999998                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc---
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---  163 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---  163 (392)
                              +++......+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+.......   
T Consensus       108 y~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i-iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~  186 (299)
T d1jpaa_         108 FMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT  186 (299)
T ss_dssp             CCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred             ecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCC-ccCccccceEEECCCCcEEECCcccceEccCCCCcce
Confidence                    4555555579999999999999999999999999 9999999999999999999999999986532211   


Q ss_pred             -------------------------ccccccceeeeeee
Q psy6828         164 -------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------------~~~d~~s~g~~~~~  177 (392)
                                               ..+|+||||+++||
T Consensus       187 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~e  225 (299)
T d1jpaa_         187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE  225 (299)
T ss_dssp             ---------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             eeecccccCCccccCHHHHhcCCCCcccccccchHHHHH
Confidence                                     11289999999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.1e-27  Score=222.25  Aligned_cols=123  Identities=22%  Similarity=0.308  Sum_probs=91.7

Q ss_pred             cccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------
Q psy6828          36 WFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------   94 (392)
Q Consensus        36 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------   94 (392)
                      |.+.....+.|...+.||+|+||+||+|.++.+|+.||||++.+... ...+.+.+|+.+                    
T Consensus         1 ~~~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~   80 (307)
T d1a06a_           1 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG   80 (307)
T ss_dssp             CEECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCCCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            44444456667778899999999999999999999999999986654 334567788887                    


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc---CCceEEEeccccch
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD---SRWVVKLADFGLTE  156 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~---~~~~~kl~DFGla~  156 (392)
                                     +++... ..+++.++..++.||+.||.|||++++ +||||||+|||+.   .++.+||+|||+|+
T Consensus        81 ~~~lvmE~~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~i-iHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          81 HLYLIMQLVSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             EEEEEEeccCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhhhcee-eeEEecccceeecccCCCceEEEeccceeE
Confidence                           444433 369999999999999999999999999 9999999999995   46899999999998


Q ss_pred             hccc
Q psy6828         157 FKRD  160 (392)
Q Consensus       157 ~~~~  160 (392)
                      ....
T Consensus       159 ~~~~  162 (307)
T d1a06a_         159 MEDP  162 (307)
T ss_dssp             ----
T ss_pred             EccC
Confidence            6543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.5e-27  Score=212.38  Aligned_cols=128  Identities=24%  Similarity=0.386  Sum_probs=100.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+.||+|+||.||+|.+. +++.||||++++.... .+.+.+|+.+                                
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCc-HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            33567999999999999854 6788999999865443 4678889888                                


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-------
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-------  164 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------  164 (392)
                         +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++........       
T Consensus        86 ~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i-iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~g  164 (263)
T d1sm2a_          86 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF  164 (263)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCTTCSGGGEEECGGGCEEECSCC------------------
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce-eecccchhheeecCCCCeEecccchheeccCCCceeecceec
Confidence               5555555579999999999999999999999999 99999999999999999999999999865332111       


Q ss_pred             -----------------cccccceeeeeee
Q psy6828         165 -----------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -----------------~~d~~s~g~~~~~  177 (392)
                                       .+|+||||+++||
T Consensus       165 t~~y~aPE~l~~~~~~~k~DVwS~Gvil~e  194 (263)
T d1sm2a_         165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWE  194 (263)
T ss_dssp             CTTSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             CcccCChHHhcCCCCCchhhhcchHHHHHH
Confidence                             1289999999988

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=4e-27  Score=222.14  Aligned_cols=131  Identities=19%  Similarity=0.209  Sum_probs=111.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+|+.||||++.+......+.+.+|+.+                               
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  107 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  107 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            5566789999999999999999999999999988777777888999988                               


Q ss_pred             ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC--CceEEEeccccchhccccccc----
Q psy6828          95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS--RWVVKLADFGLTEFKRDAEYT----  164 (392)
Q Consensus        95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~~~~~~~~----  164 (392)
                          +++......+++.++..++.||+.||.|||++++ +||||||+|||++.  ++.+||+|||+|+........    
T Consensus       108 g~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i-iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~  186 (350)
T d1koaa2         108 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT  186 (350)
T ss_dssp             CBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEEC
T ss_pred             CCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eeeeechhHeeeccCCCCeEEEeecchheecccccccceec
Confidence                4554444579999999999999999999999999 99999999999964  578999999999865433211    


Q ss_pred             ------------------cccccceeeeeee
Q psy6828         165 ------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ------------------~~d~~s~g~~~~~  177 (392)
                                        ..|+||+|+++|+
T Consensus       187 gT~~Y~aPEv~~~~~~~~~~DiwSlGvilye  217 (350)
T d1koaa2         187 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYI  217 (350)
T ss_dssp             SCTTTCCHHHHHTCCBCHHHHHHHHHHHHHH
T ss_pred             CcccccCHHHHcCCCCChhHhhhhhhHHHHH
Confidence                              2288888888888

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.9e-27  Score=213.46  Aligned_cols=131  Identities=21%  Similarity=0.277  Sum_probs=101.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      +...+.||+|+||+||+|....++    ..||||+++.... ...+.+.+|+.+                          
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~   88 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT   88 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence            334567999999999999977654    4799999976543 345568899988                          


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+.......  
T Consensus        89 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i-iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  167 (283)
T d1mqba_          89 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT  167 (283)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             EecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc-ccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence                     4444455579999999999999999999999999 9999999999999999999999999986533211  


Q ss_pred             ------------------------ccccccceeeeeee
Q psy6828         164 ------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------------------~~~d~~s~g~~~~~  177 (392)
                                              ..+|+||||+++||
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~e  205 (283)
T d1mqba_         168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWE  205 (283)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHH
Confidence                                    01289999999998

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-26  Score=211.74  Aligned_cols=109  Identities=20%  Similarity=0.322  Sum_probs=93.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------   94 (392)
                      +...+.||+|+||+||+|..   +..||||+++...  ....+.+.+|+.+                             
T Consensus        10 ~~~~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~   86 (276)
T d1uwha_          10 ITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCE   86 (276)
T ss_dssp             CCCCSEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCC
T ss_pred             EEEEEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCC
Confidence            45567899999999999963   3469999997553  3566789999998                             


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                           +++......+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+..
T Consensus        87 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i-vHrDlKp~NiLl~~~~~~Kl~DFGla~~~  154 (276)
T d1uwha_          87 GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGLATVK  154 (276)
T ss_dssp             EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCE-eccccCHHHEEEcCCCCEEEccccceeec
Confidence                 6665555579999999999999999999999999 99999999999999999999999999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1e-27  Score=226.34  Aligned_cols=131  Identities=18%  Similarity=0.214  Sum_probs=107.1

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------   94 (392)
                      .|...+.||+|+||+||+|.++.+|+.||||++++...   ...+.+.+|+.+                           
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            46667789999999999999999999999999975432   335678889888                           


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--  164 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--  164 (392)
                              +++... ..+++.+++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+.......+  
T Consensus       122 ~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~i-iHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~  199 (350)
T d1rdqe_         122 YVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC  199 (350)
T ss_dssp             CCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred             cccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCcCCHHHcccCCCCCEEeeeceeeeeccccccccc
Confidence                    222222 269999999999999999999999999 99999999999999999999999999876543211  


Q ss_pred             ------------------cccccceeeeeee
Q psy6828         165 ------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ------------------~~d~~s~g~~~~~  177 (392)
                                        ..|+||+|+++|+
T Consensus       200 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilye  230 (350)
T d1rdqe_         200 GTPEALAPEIILSKGYNKAVDWWALGVLIYE  230 (350)
T ss_dssp             ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             CccccCCHHHHcCCCCCccccccchhHHHHH
Confidence                              1277777777777

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.8e-27  Score=212.87  Aligned_cols=110  Identities=18%  Similarity=0.304  Sum_probs=93.2

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------   94 (392)
                      ....||+|+||+||+|.+..+++.||+|.+.....  ...+.+.+|+.+                               
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            34569999999999999999999999999876543  445678899988                               


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEc-CCceEEEeccccchhcc
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVD-SRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~-~~~~~kl~DFGla~~~~  159 (392)
                              +++.+. ..+++.++..++.||+.||.|||+++  + +||||||+|||++ +++.+||+|||+|+...
T Consensus        93 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~~~I-iHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          93 LMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCC-CCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             CCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHCCCCE-EeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence                    333222 26999999999999999999999998  8 9999999999996 57899999999998644

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-26  Score=211.50  Aligned_cols=129  Identities=21%  Similarity=0.305  Sum_probs=103.2

Q ss_pred             eccCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      +..+.||+|+||+||+|....  +++.||||+++....  ...+.+.+|+.+                            
T Consensus        10 le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~   89 (277)
T d1xbba_          10 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMA   89 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECC
T ss_pred             ecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcC
Confidence            334579999999999998654  457899999975432  345679999988                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-----
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-----  163 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-----  163 (392)
                            +++.... .+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.......     
T Consensus        90 ~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~~i-iHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          90 ELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             TTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             CCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhCCc-ccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence                  4444333 69999999999999999999999999 9999999999999999999999999986432211     


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ..+|+||||+++||
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~e  202 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE  202 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhH
Confidence                                 12299999999998

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.93  E-value=1.3e-27  Score=218.45  Aligned_cols=131  Identities=23%  Similarity=0.205  Sum_probs=107.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---------hHHHHHHHHHHH---------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---------DITRAMKKELKI---------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~~E~~~---------------------   94 (392)
                      .|...+.||+|+||+||+|++..+|+.||||++++...         ...+.+.+|+.+                     
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~   83 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   83 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc
Confidence            35567789999999999999999999999999976542         133467788877                     


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     ++++.. ..+++.+++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~Nill~~~~~~kl~DFG~a~~~~  161 (277)
T d1phka_          84 FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI-VHRDLKPENILLDDDMNIKLTDFGFSCQLD  161 (277)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ceEEEEEcCCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCC-cccccccceEEEcCCCCeEEccchheeEcc
Confidence                           344332 269999999999999999999999999 999999999999999999999999998654


Q ss_pred             ccccc----------------------------cccccceeeeeee
Q psy6828         160 DAEYT----------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~~~----------------------------~~d~~s~g~~~~~  177 (392)
                      .....                            ..|+||+|+++|+
T Consensus       162 ~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilye  207 (277)
T d1phka_         162 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  207 (277)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             CCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhh
Confidence            32110                            1288999999888

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.6e-28  Score=219.79  Aligned_cols=132  Identities=20%  Similarity=0.276  Sum_probs=101.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH-----------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI-----------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~-----------------------   94 (392)
                      ..|...+.||+|+||+||+|.+..+|+.||||++++...      ....++.+|+.+                       
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            456677889999999999999999999999999865321      111123344433                       


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~  158 (392)
                                     +++... ..+++.+++.++.|++.||.|||++++ +||||||+|||++. ++.+||+|||+|+..
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~~i-iHrDiKp~NIll~~~~~~vkl~DFG~a~~~  161 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALL  161 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEEEEEeccCcchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCC-ccccCcccceEEecCCCeEEECccccceec
Confidence                           233222 269999999999999999999999999 99999999999985 479999999999865


Q ss_pred             cccccc----------------------cccccceeeeeee
Q psy6828         159 RDAEYT----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       159 ~~~~~~----------------------~~d~~s~g~~~~~  177 (392)
                      ......                      ..|+||+|+++|+
T Consensus       162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilye  202 (273)
T d1xwsa_         162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  202 (273)
T ss_dssp             CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehh
Confidence            432211                      1288888888887

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3e-27  Score=215.22  Aligned_cols=114  Identities=20%  Similarity=0.286  Sum_probs=90.7

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+|+.||||.++....  ...+.+.+|+.+                             
T Consensus         6 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEE
T ss_pred             CEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEe
Confidence            4445679999999999999999999999999987654  345678899888                             


Q ss_pred             --------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCC-----cccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSA-----LRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~-----iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                              +++..   ....+++.+++.++.|++.||.|||+++     + +||||||+|||++.++.+||+|||+|+..
T Consensus        86 y~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~I-iHrDiKp~NIll~~~~~vkl~DFG~a~~~  164 (269)
T d2java1          86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV-LHRDLKPANVFLDGKQNVKLGDFGLARIL  164 (269)
T ss_dssp             CCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC----------CCGGGEEECTTSCEEECCHHHHHHC
T ss_pred             cCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCE-EeCcCchhhcCcCCCCcEEEeeccceeec
Confidence                    22221   1235999999999999999999999876     7 99999999999999999999999999876


Q ss_pred             cc
Q psy6828         159 RD  160 (392)
Q Consensus       159 ~~  160 (392)
                      ..
T Consensus       165 ~~  166 (269)
T d2java1         165 NH  166 (269)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=3.4e-27  Score=219.72  Aligned_cols=130  Identities=22%  Similarity=0.304  Sum_probs=105.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|+++.+|+.||||++++...   ...+.+.+|+.+                            
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            4456779999999999999999999999999975432   335678888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~---  164 (392)
                             .++... ..+++..+..++.||+.||.|||++++ +||||||+|||++.+|.+||+|||+|+........   
T Consensus        86 ~~gg~l~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i-iHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G  163 (316)
T d1fota_          86 IEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  163 (316)
T ss_dssp             CCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             cCCcccccccccc-ccccccHHHHHHHHHHHhhhhhccCcE-EccccCchheeEcCCCCEEEecCccceEeccccccccC
Confidence                   222222 268999999999999999999999999 99999999999999999999999999876443221   


Q ss_pred             -----------------cccccceeeeeee
Q psy6828         165 -----------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -----------------~~d~~s~g~~~~~  177 (392)
                                       ..|+||+|+++|+
T Consensus       164 t~~Y~APE~l~~~~y~~~~DiwSlGvilye  193 (316)
T d1fota_         164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYE  193 (316)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHH
T ss_pred             cccccCHHHHcCCCCCchhhccccchhHHH
Confidence                             2277777777777

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-26  Score=212.40  Aligned_cols=132  Identities=22%  Similarity=0.244  Sum_probs=94.4

Q ss_pred             eeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      .|...+.||+|+||+||+|.+..     +++.||||+++.... ...+.+.+|...                        
T Consensus        14 ~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~   93 (299)
T d1ywna1          14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL   93 (299)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCC
T ss_pred             HEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeE
Confidence            35556789999999999999764     347899999976443 334556666555                        


Q ss_pred             -------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce
Q psy6828          95 -------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV  146 (392)
Q Consensus        95 -------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~  146 (392)
                                   +++...               ...+++.++..++.||+.||.|||++++ +||||||+|||++.++.
T Consensus        94 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i-vHrDlKp~NILl~~~~~  172 (299)
T d1ywna1          94 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEKNV  172 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECGGGC
T ss_pred             EEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCC-cCCcCCccceeECCCCc
Confidence                         333321               1248999999999999999999999999 99999999999999999


Q ss_pred             EEEeccccchhccccccc-------------------------cccccceeeeeee
Q psy6828         147 VKLADFGLTEFKRDAEYT-------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       147 ~kl~DFGla~~~~~~~~~-------------------------~~d~~s~g~~~~~  177 (392)
                      +||+|||+|+........                         ..|+||||+++||
T Consensus       173 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~e  228 (299)
T d1ywna1         173 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  228 (299)
T ss_dssp             EEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             EEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHH
Confidence            999999999864322111                         1288899888888

>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Receptor-type monomeric adenylyl cyclase
species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]

Probab=99.93  E-value=5.9e-26  Score=202.43  Aligned_cols=136  Identities=29%  Similarity=0.413  Sum_probs=107.3

Q ss_pred             cccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccc
Q psy6828         215 EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYD  294 (392)
Q Consensus       215 ~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~  294 (392)
                      +.+...+++++|+||+|||.+++. .|+++.++|+.|+..+++++.+|+|+++|++||++|++||.|..           
T Consensus         6 p~~~~~~vtilF~DI~gfT~l~e~-~p~~~~~~l~~~~~~~~~~i~~~~G~~~k~~GD~~l~~F~~p~~-----------   73 (235)
T d1fx2a_           6 PKEPTDPVTLIFTDIESSTALWAA-HPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPFA-----------   73 (235)
T ss_dssp             CCCTTSCEEEEEEEETTHHHHHHH-CTTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCHHH-----------
T ss_pred             CCCCCCCEEEEEEeccChHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEeeCCCch-----------
Confidence            344457799999999999999987 57899999999999999999999999999999999999987632           


Q ss_pred             ccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcc--------------------cC-------------
Q psy6828         295 VYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTV--------------------RH-------------  341 (392)
Q Consensus       295 ~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~--------------------~~-------------  341 (392)
                                                  |+.+|++++..+...++                    ..             
T Consensus        74 ----------------------------a~~~A~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (235)
T d1fx2a_          74 ----------------------------AVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVY  125 (235)
T ss_dssp             ----------------------------HHHHHHHHHHHHHHSCCSCSHHHHHHHHHHHHHHHHCSSCCCSSTTSCHHHH
T ss_pred             ----------------------------HHHHHHHHHHHHhhcccchhhhhhhhHHHHHHHHHhhhhhhhhHHHHHHHHh
Confidence                                        22233333322221110                    00             


Q ss_pred             -CCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828         342 -RPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV  391 (392)
Q Consensus       342 -~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~  391 (392)
                       ....++++|||||+|+|++|.+|.+. +|+++|++||+|||||++++||.
T Consensus       126 ~~~~~~l~vriGi~~G~v~~g~~g~~~-~~~~~G~~Vn~AaRles~a~~g~  175 (235)
T d1fx2a_         126 SRLWNGLRVRVGIHTGLCDIRHDEVTK-GYDYYGRTPNMAARTESVANGGQ  175 (235)
T ss_dssp             HHHCCSCCEEEEEEEECCEEEECTTSS-SEEEESHHHHHHHHHHHTCCTTC
T ss_pred             hccCCCceEEEEEEecceEEeccccce-eeeeecHHHHHHHHHHhccCCCe
Confidence             01235899999999999999999764 69999999999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-26  Score=215.97  Aligned_cols=131  Identities=18%  Similarity=0.270  Sum_probs=109.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      +|...+.||+|+||+||+|.++.+|+.||||++++.... ...+.+|+.+                              
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~-~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH-HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc-HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            466677899999999999999999999999999876543 3567888887                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC--ceEEEeccccchhccccccc---
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLADFGLTEFKRDAEYT---  164 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~--~~~kl~DFGla~~~~~~~~~---  164 (392)
                           +++......+++.+++.|+.||+.||.|||++++ +||||||+|||++.+  ..+||+|||+++........   
T Consensus        85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~i-iHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~  163 (321)
T d1tkia_          85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI-GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL  163 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC-CcccccccceeecCCCceEEEEcccchhhccccCCccccc
Confidence                 5555555579999999999999999999999999 999999999999854  57999999999865432211   


Q ss_pred             -------------------cccccceeeeeee
Q psy6828         165 -------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -------------------~~d~~s~g~~~~~  177 (392)
                                         ..|+||+|+++|+
T Consensus       164 ~~t~~y~ape~~~~~~~~~~~DiWSlGvily~  195 (321)
T d1tkia_         164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHH
T ss_pred             ccccccccchhccCCCCCchhhcccHHHHHHH
Confidence                               1299999999999

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.5e-27  Score=216.41  Aligned_cols=109  Identities=28%  Similarity=0.405  Sum_probs=90.4

Q ss_pred             CCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH-----HHHHHHHHHH-------------------------------
Q psy6828          51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI-----TRAMKKELKI-------------------------------   94 (392)
Q Consensus        51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-----~~~~~~E~~~-------------------------------   94 (392)
                      .||+|+||+||+|++..+|+.||||+++......     .+.+.+|+.+                               
T Consensus         5 ~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~   84 (299)
T d1ua2a_           5 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET   84 (299)
T ss_dssp             EEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE
T ss_pred             EeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcc
Confidence            4899999999999999999999999997654321     2457888887                               


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                         ..+...+..+++.++..+++||+.||.|||++++ +||||||+|||++.++.+||+|||+|+....
T Consensus        85 ~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i-iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~  152 (299)
T d1ua2a_          85 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGLAKSFGS  152 (299)
T ss_dssp             EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             hHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccce-ecccCCcceEEecCCCccccccCccccccCC
Confidence               3334445579999999999999999999999999 9999999999999999999999999976543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.8e-27  Score=216.66  Aligned_cols=131  Identities=21%  Similarity=0.294  Sum_probs=105.3

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-----------------------------   94 (392)
                      |...+.||+|+||+||+|.+..+|+.||||+++....  ...+.+.+|+.+                             
T Consensus         4 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~   83 (298)
T d1gz8a_           4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   83 (298)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             CEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeec
Confidence            4456779999999999999999999999999975543  234678889988                             


Q ss_pred             -----HHh-hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-----
Q psy6828          95 -----DIM-ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-----  163 (392)
Q Consensus        95 -----~~l-~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-----  163 (392)
                           +++ ......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+.......     
T Consensus        84 ~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~I-iHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~  162 (298)
T d1gz8a_          84 HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE  162 (298)
T ss_dssp             SEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCC
T ss_pred             CCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCE-EccccCchheeecccCcceeccCCcceeccCCcccceee
Confidence                 222 2334469999999999999999999999999 9999999999999999999999999986543221     


Q ss_pred             -------------------ccccccceeeeeee
Q psy6828         164 -------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~  177 (392)
                                         ..+|+||+|+++|+
T Consensus       163 ~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~  195 (298)
T d1gz8a_         163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE  195 (298)
T ss_dssp             BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             cccceeeehhhhccccCCCccccccccchhhhH
Confidence                               11288888888887

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9e-27  Score=218.51  Aligned_cols=151  Identities=17%  Similarity=0.152  Sum_probs=110.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|+++.+|+.||||++++...   ...+.+.+|+.+                            
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceec
Confidence            4445679999999999999999999999999976533   345678888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD  167 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d  167 (392)
                             +++... ..+++..++.++.|++.||.|||++++ +||||||+|||++.+|.+||+|||+|+.........  
T Consensus        87 ~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~~i-iHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~--  162 (337)
T d1o6la_          87 ANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--  162 (337)
T ss_dssp             CTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB--
T ss_pred             cCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhhcCc-cccccCHHHeEecCCCCEEEeecccccccccCCccc--
Confidence                   222222 269999999999999999999999999 999999999999999999999999998654322111  


Q ss_pred             ccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828         168 QHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML  200 (392)
Q Consensus       168 ~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l  200 (392)
                      ....|++.|++||    .+++...|+|+.+.+++.++
T Consensus       163 ~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml  199 (337)
T d1o6la_         163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM  199 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH
T ss_pred             ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHH
Confidence            1123444444443    22333444555555444443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.7e-27  Score=216.53  Aligned_cols=112  Identities=19%  Similarity=0.308  Sum_probs=96.0

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+|+.||||++++...   ...+.+.+|+.+                            
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy   89 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY   89 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEc
Confidence            5566789999999999999999999999999975432   334678888887                            


Q ss_pred             -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+|+...
T Consensus        90 ~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~i-iHrDiKp~NIll~~~~~vkl~DFG~a~~~~  159 (288)
T d1uu3a_          90 AKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLS  159 (288)
T ss_dssp             CTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             cCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhccccE-EcCcCCccccccCCCceEEecccccceecc
Confidence                   333322 269999999999999999999999999 999999999999999999999999998654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.2e-27  Score=217.58  Aligned_cols=112  Identities=21%  Similarity=0.326  Sum_probs=95.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------   94 (392)
                      |...+.||+|+||+||+|+++.+|+.||+|++++.. ....+.+.+|+.+                              
T Consensus         8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~   87 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD   87 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             CEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            455677999999999999999999999999997643 2445678899888                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                           +++.+. ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||+|+...
T Consensus        88 gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~~~I-iHRDiKP~NILl~~~~~vkl~DFGla~~~~  156 (322)
T d1s9ja_          88 GGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLI  156 (322)
T ss_dssp             TEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHCC-CCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             CCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCE-EccccCHHHeeECCCCCEEEeeCCCccccC
Confidence                 333332 2699999999999999999999975 89 999999999999999999999999998654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-26  Score=210.50  Aligned_cols=134  Identities=22%  Similarity=0.257  Sum_probs=109.5

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH---------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI---------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~---------------------   94 (392)
                      ..++|...+.||+|+||+||+|+++.+|+.||||++++...      ...+.+.+|+.+                     
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            45667778899999999999999999999999999975433      235778899887                     


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc----eEEEeccccch
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTE  156 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~  156 (392)
                                    +++.... .+++.++..++.|++.||.|||++++ +||||||+|||++.++    .+|++|||+|+
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~i-vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQI-AHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcce-eecccccceEEEecCCCcccceEecchhhhh
Confidence                          3333322 69999999999999999999999999 9999999999998776    49999999998


Q ss_pred             hccccccc----------------------cccccceeeeeee
Q psy6828         157 FKRDAEYT----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       157 ~~~~~~~~----------------------~~d~~s~g~~~~~  177 (392)
                      ........                      ..|+||+|+++|+
T Consensus       166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilye  208 (293)
T d1jksa_         166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  208 (293)
T ss_dssp             ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHH
Confidence            65432211                      1288888888888

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=5.1e-26  Score=210.55  Aligned_cols=131  Identities=21%  Similarity=0.326  Sum_probs=104.9

Q ss_pred             eeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +...+.||+|+||+||+|+.+     .+++.||||+++.... ...+.+.+|+.+                         
T Consensus        15 ~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v   94 (301)
T d1lufa_          15 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLL   94 (301)
T ss_dssp             CEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEE
Confidence            455667999999999999865     3567899999976543 456679999988                         


Q ss_pred             ----------HHhhcC-----------------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE
Q psy6828          95 ----------DIMENE-----------------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV  141 (392)
Q Consensus        95 ----------~~l~~~-----------------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll  141 (392)
                                +++...                       ...+++.++..++.|++.||.|||++++ +||||||+|||+
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i-vHrDlKp~NILl  173 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLV  173 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEE
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCe-EeeEEcccceEE
Confidence                      222211                       1148999999999999999999999999 999999999999


Q ss_pred             cCCceEEEeccccchhccccccc-------------------------cccccceeeeeee
Q psy6828         142 DSRWVVKLADFGLTEFKRDAEYT-------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       142 ~~~~~~kl~DFGla~~~~~~~~~-------------------------~~d~~s~g~~~~~  177 (392)
                      +.++.+||+|||+|+...+....                         ..|+||||+++||
T Consensus       174 d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~e  234 (301)
T d1lufa_         174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE  234 (301)
T ss_dssp             CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHH
Confidence            99999999999999865332111                         1299999999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-26  Score=206.33  Aligned_cols=128  Identities=24%  Similarity=0.335  Sum_probs=106.0

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      ...+.||+|+||+||+|++ .+++.||||++++.... .+.+.+|+.+                                
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~-~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSSC-HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             EEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcCC-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            3467899999999999996 47889999999876543 4578899988                                


Q ss_pred             ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-------
Q psy6828          95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-------  164 (392)
Q Consensus        95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------  164 (392)
                         +++......+++..+..++.|+++||.|||++++ +||||||+|||+++++.+||+|||+++........       
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~i-iH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~  163 (258)
T d1k2pa_          85 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF  163 (258)
T ss_dssp             EHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTB-CCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCC
T ss_pred             cHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCc-ccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCC
Confidence               3334444479999999999999999999999999 99999999999999999999999999764332211       


Q ss_pred             -----------------cccccceeeeeee
Q psy6828         165 -----------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -----------------~~d~~s~g~~~~~  177 (392)
                                       .+|+||||+++||
T Consensus       164 t~~y~aPE~~~~~~~~~ksDiwS~G~~l~e  193 (258)
T d1k2pa_         164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWE  193 (258)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCCcCCcHHhcCCCCCcceeecccchhhHh
Confidence                             2299999999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=2.3e-26  Score=211.36  Aligned_cols=131  Identities=23%  Similarity=0.298  Sum_probs=106.9

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------   94 (392)
                      +|...+.||+|+||+||+|+++ +|+.||||+++....  ...+.+.+|+.+                            
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            3556678999999999999874 789999999976543  235678889988                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-----
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-----  163 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-----  163 (392)
                            ..+......+++.++..++.||+.||+|||++++ +||||||+|||++.++.+|++|||+|........     
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~I-vHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE  160 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcE-EecCCCCceeeEcCCCCEEecccccceecccCcccccee
Confidence                  3344444579999999999999999999999999 9999999999999999999999999986533211     


Q ss_pred             -------------------ccccccceeeeeee
Q psy6828         164 -------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~  177 (392)
                                         ...|+||+|+++|+
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~e  193 (286)
T d1ob3a_         161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE  193 (286)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             cccchhhhHHHHhCCCCCCcceeehhcCcHHHH
Confidence                               11288888888888

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=205.15  Aligned_cols=132  Identities=20%  Similarity=0.257  Sum_probs=100.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV-DITRAMKKELKI--------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------   94 (392)
                      .|...+.||+|+||+||+|.+..+   +..||||.++.... ...+.+.+|+.+                          
T Consensus         8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E   87 (273)
T d1mp8a_           8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIME   87 (273)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             HeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEE
Confidence            355567899999999999987654   35799999975443 445678899888                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc---
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---  163 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---  163 (392)
                              +++......+++.++..++.||+.||.|||++++ +||||||+||+++.++.+||+|||+|+.......   
T Consensus        88 ~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i-iHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~  166 (273)
T d1mp8a_          88 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA  166 (273)
T ss_dssp             CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEEEETTEEEECC---------------
T ss_pred             eccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCe-eccccchhheeecCCCcEEEccchhheeccCCcceec
Confidence                    4444555579999999999999999999999999 9999999999999999999999999986532211   


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ..+|+||||+++||
T Consensus       167 ~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e  201 (273)
T d1mp8a_         167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  201 (273)
T ss_dssp             ----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             cceecCcccchhhHhccCCCCCccccccchHHHHH
Confidence                                 11299999999998

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.1e-27  Score=217.20  Aligned_cols=130  Identities=23%  Similarity=0.258  Sum_probs=103.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------   94 (392)
                      |...+.||+|+||+||+|.++.+|+.||||++++...   ...+.+.+|..+                            
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            4456789999999999999999999999999975432   223445555443                            


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc---
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---  163 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---  163 (392)
                              +++... ..+++.++..++.||+.||.|||++++ +||||||+|||+++++.+||+|||+++.......   
T Consensus        84 y~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~~i-iHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~  161 (320)
T d1xjda_          84 YLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN  161 (320)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTC-BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred             ecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCcccceeecCCCceeccccchhhhccccccccc
Confidence                    333322 269999999999999999999999999 9999999999999999999999999985432211   


Q ss_pred             --------------------ccccccceeeeeee
Q psy6828         164 --------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 --------------------~~~d~~s~g~~~~~  177 (392)
                                          ...|+||+|+++|+
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  195 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE  195 (320)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHH
Confidence                                11299999999999

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.8e-26  Score=209.57  Aligned_cols=132  Identities=20%  Similarity=0.246  Sum_probs=109.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH----------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------   94 (392)
                      +|...+.||+|+||+||+|++..+|+.||||+++...  ....+.+.+|+.+                            
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            4566678999999999999999999999999986543  2456788999998                            


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-----
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-----  163 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-----  163 (392)
                            ..+......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||.++.......     
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~I-vHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~  161 (292)
T d1unla_          83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE  161 (292)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSC
T ss_pred             ccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCE-eeecccCcccccccCCceeeeecchhhcccCCCccceee
Confidence                  2223344579999999999999999999999999 9999999999999999999999999986533221     


Q ss_pred             -------------------ccccccceeeeeee
Q psy6828         164 -------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~  177 (392)
                                         ...|+||+|+++|+
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~e  194 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHH
Confidence                               12388888888888

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=1.5e-26  Score=219.52  Aligned_cols=130  Identities=17%  Similarity=0.186  Sum_probs=101.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHH---HHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKE---LKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E---~~~-------------------------   94 (392)
                      |...+.||+|+||+||+|.+..+|+.||||++++....   ....+.+|   +.+                         
T Consensus         6 y~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           6 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            44566799999999999999999999999999754331   12233344   332                         


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-  163 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-  163 (392)
                                +++... ..+++.+++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+....... 
T Consensus        86 mE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~i-iHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~  163 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  163 (364)
T ss_dssp             ECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC
T ss_pred             EEecCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHCCc-cceeeccceeEEcCCCcEEEeeeceeeecCCCccc
Confidence                      333322 268999999999999999999999999 9999999999999999999999999986543221 


Q ss_pred             ---------------------ccccccceeeeeee
Q psy6828         164 ---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ---------------------~~~d~~s~g~~~~~  177 (392)
                                           ...|+||+|+++|+
T Consensus       164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilye  198 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  198 (364)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             ccccccccchhHHhhcCCCCCcccchhHHHHHHHH
Confidence                                 11288888888888

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.92  E-value=9.1e-26  Score=211.37  Aligned_cols=131  Identities=21%  Similarity=0.299  Sum_probs=105.8

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      ...|...+.||+|+||+||+|++..+|+.||||++++..   .+.+.+|+.+                            
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            345777889999999999999999999999999997654   3456777776                            


Q ss_pred             -HHhh-----cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcccccc----
Q psy6828          95 -DIME-----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAEY----  163 (392)
Q Consensus        95 -~~l~-----~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~~----  163 (392)
                       +++.     .....+++.+++.++.||+.||.|||++++ +||||||+|||++.++ .+||+|||+|+.......    
T Consensus       111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gI-vHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~  189 (328)
T d3bqca1         111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI-MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  189 (328)
T ss_dssp             EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSC
T ss_pred             EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhccc-ccccccccceEEcCCCCeeeecccccceeccCCCccccc
Confidence             1111     112269999999999999999999999999 9999999999998654 699999999986543221    


Q ss_pred             -------------------ccccccceeeeeee
Q psy6828         164 -------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 -------------------~~~d~~s~g~~~~~  177 (392)
                                         ...|+||+|+++|+
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e  222 (328)
T d3bqca1         190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  222 (328)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             ccCccccCcccccCCCCCCcccchhhhhhhhHH
Confidence                               11289999999998

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.3e-26  Score=214.86  Aligned_cols=127  Identities=20%  Similarity=0.286  Sum_probs=100.5

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      |...+.||+|+||+||+|++..+|+.||||++.+....    ..+|+.+                               
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            55567799999999999999999999999999765432    1234444                               


Q ss_pred             ---------HHh---hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcccc
Q psy6828          95 ---------DIM---ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDA  161 (392)
Q Consensus        95 ---------~~l---~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~  161 (392)
                               +.+   ......+++.+++.++.||+.||.|||++|+ +||||||+|||++.++ .+||+|||+++.....
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~I-iHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI-CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCC-cccCCCcceEEEecCCCceeEecccchhhccCC
Confidence                     111   1233369999999999999999999999999 9999999999999775 8999999999865332


Q ss_pred             cc-----------------------ccccccceeeeeee
Q psy6828         162 EY-----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       162 ~~-----------------------~~~d~~s~g~~~~~  177 (392)
                      ..                       ...|+||+|+++|+
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~e  215 (350)
T d1q5ka_         177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  215 (350)
T ss_dssp             SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             cccccccccccccChHHhhcccCCCcceeecccceEEEe
Confidence            21                       11289999999888

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.5e-26  Score=207.44  Aligned_cols=130  Identities=24%  Similarity=0.271  Sum_probs=101.7

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------HHhhc
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------DIMEN   99 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------~~l~~   99 (392)
                      .+...+.||+|+||+||+|++. +++.||||+++.... ..+.+.+|+.+                         +|+..
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~   95 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   95 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECcccC-CHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCC
Confidence            3555667999999999999865 456799999976544 34678899888                         22222


Q ss_pred             C----------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc------
Q psy6828         100 E----------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY------  163 (392)
Q Consensus       100 ~----------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------  163 (392)
                      +          ...+++.++..++.||+.||.|||++++ +||||||+|||++.++++||+|||+++.......      
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i-vH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~  174 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA  174 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe-ecccccceEEEECCCCcEEEcccchhhhccCCCceeeccc
Confidence            1          1258999999999999999999999999 9999999999999999999999999986532221      


Q ss_pred             ------------------ccccccceeeeeee
Q psy6828         164 ------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------------~~~d~~s~g~~~~~  177 (392)
                                        ..+|+||||+++||
T Consensus       175 ~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~e  206 (285)
T d1fmka3         175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  206 (285)
T ss_dssp             -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccChHHHhCCCCCcHHhhhcchHHHHH
Confidence                              11289999999998

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=1.1e-25  Score=205.75  Aligned_cols=114  Identities=18%  Similarity=0.200  Sum_probs=97.5

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      +.+|...+.||+|+||+||+|.+..+|+.||||++++...   ...+.+.+|+.+                         
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            4556777889999999999999999999999999976543   445678899988                         


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                    +++... ..+++.++..++.||+.||.|||++++ +||||||+|||++.++..+++|||+++..
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~~i-iHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGI-IHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-cCccccCcccccCccccceeehhhhhhhh
Confidence                          222222 269999999999999999999999999 99999999999999999999999987643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=211.99  Aligned_cols=133  Identities=24%  Similarity=0.311  Sum_probs=104.9

Q ss_pred             cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------
Q psy6828          42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------   94 (392)
Q Consensus        42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------   94 (392)
                      ..++|...+.||+|+||+||+|.+..+|+.||||++++...  ...+.+.+|+.+                         
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            45677788899999999999999999999999999976433  345678888888                         


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     .+.++  ..+++..++.++.||+.||.|||++|+ +||||||+|||++.++.+|++|||+|+...
T Consensus        96 ~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~I-iHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          96 TDFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CCCEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             ceEEEEEecccccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhCCC-cccccCcchhhcccccccccccccceeccC
Confidence                           12222  269999999999999999999999999 999999999999999999999999998654


Q ss_pred             cccc---------------------ccccccceeeeeee
Q psy6828         160 DAEY---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       160 ~~~~---------------------~~~d~~s~g~~~~~  177 (392)
                      ....                     ...|+||+|+++|+
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  211 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHH
Confidence            3221                     12389999999988

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.9e-25  Score=210.58  Aligned_cols=113  Identities=25%  Similarity=0.378  Sum_probs=96.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------   94 (392)
                      +.+|...+.||+|+||+||+|.+..+|+.||||++++... ...+.+.+|+.+                           
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            3457778899999999999999999999999999976543 446678889888                           


Q ss_pred             ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828          95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK  158 (392)
Q Consensus        95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~  158 (392)
                                  ++++..  .+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus        87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~~i-iHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCC-cCCCCCcceEEECCCCCEEEcccCceeec
Confidence                        444433  59999999999999999999999999 99999999999999999999999998754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-25  Score=211.21  Aligned_cols=108  Identities=19%  Similarity=0.278  Sum_probs=89.7

Q ss_pred             eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828          47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------   94 (392)
Q Consensus        47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------   94 (392)
                      +..+.||+|+||+||+|.+..+++.||||++++..     .+.+|+.+                                
T Consensus        15 i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-----~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          15 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcH-----HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            33456999999999999999999999999997542     34455544                                


Q ss_pred             --------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhccc
Q psy6828          95 --------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~~~  160 (392)
                              +++... ...+++.+++.|+.||+.||.|||++++ +||||||+|||++.   ++.+||+|||+|+....
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~i-iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI-AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTE-ECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCC-ccccccccccccccccccccccccccceeeeccC
Confidence                    445433 3469999999999999999999999999 99999999999985   46799999999986544

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=1.4e-25  Score=207.41  Aligned_cols=113  Identities=22%  Similarity=0.252  Sum_probs=92.9

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------   94 (392)
                      .+|...+.||+|+||+||+|++..+|+.||||++......  +.+..|..+                             
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            3466778899999999999999999999999998654332  234556665                             


Q ss_pred             ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhcc
Q psy6828          95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~~  159 (392)
                            +.+......+++..+..++.|++.||+|||++++ +||||||+|||++.   +..+|++|||+|+...
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-iHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          85 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             cCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCe-eeccCCHhhccccccCCCceeeeeccCcceecc
Confidence                  3334444579999999999999999999999999 99999999999864   4569999999998754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-25  Score=209.24  Aligned_cols=131  Identities=22%  Similarity=0.341  Sum_probs=104.2

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKS-VDITRAMKKELKI--------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------   94 (392)
                      |...+.||+|+||+||+|.+..+|+    +||+|.++... ....+.+.+|+.+                          
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e   90 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ   90 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEE
Confidence            3445679999999999999887776    58999886532 3456778999988                          


Q ss_pred             --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--
Q psy6828          95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--  164 (392)
Q Consensus        95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--  164 (392)
                              +++......+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+|+........  
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i-iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~  169 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH  169 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCc-ccCcchhhcceeCCCCCeEeeccccceeccccccccc
Confidence                    4444455579999999999999999999999999 99999999999999999999999999875432211  


Q ss_pred             -----------------------cccccceeeeeee
Q psy6828         165 -----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 -----------------------~~d~~s~g~~~~~  177 (392)
                                             .+|+||||+++||
T Consensus       170 ~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~e  205 (317)
T d1xkka_         170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE  205 (317)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCccccChHHHhcCCCChhhhhhhHHHHHHH
Confidence                                   1288888888887

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-25  Score=211.27  Aligned_cols=132  Identities=23%  Similarity=0.343  Sum_probs=108.0

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      .++|...+.||+|+||+||+|.+..+|+.||||++++...  ...+.+.+|+.+                          
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4567888899999999999999999999999999986543  445678889888                          


Q ss_pred             --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828          95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus        95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  160 (392)
                                    +++...  .+++.+++.++.||+.||.|||++++ +||||||+|||++.++.+|++|||++.....
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~gi-iHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             eEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhCCC-cccccCCccccccccccccccccchhcccCc
Confidence                          344332  69999999999999999999999999 9999999999999999999999999875432


Q ss_pred             ccc---------------------ccccccceeeeeee
Q psy6828         161 AEY---------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       161 ~~~---------------------~~~d~~s~g~~~~~  177 (392)
                      ...                     ...|+||+|+++|+
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~  211 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  211 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHH
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHH
Confidence            221                     23499999999998

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-25  Score=210.12  Aligned_cols=115  Identities=24%  Similarity=0.348  Sum_probs=95.1

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      .+|...+.||+|+||+||+|++..+|+.||||++.....  ...+.+.+|+.+                           
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            556777889999999999999999999999999865432  334567788877                           


Q ss_pred             ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                                     .........+++.+++.++.|++.||.|||++++ +||||||+|||++.++.+|++|||+++...
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~i-vHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTE-ECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCE-EecCcCchheeecCCCcEEeeecceeeecc
Confidence                           2222334479999999999999999999999999 999999999999999999999999997543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=201.77  Aligned_cols=127  Identities=21%  Similarity=0.322  Sum_probs=103.7

Q ss_pred             CCCCCcceeEEEEEEEeecC---cEEEEEEcCCC-ChhHHHHHHHHHHH-------------------------------
Q psy6828          50 NPDSDFRYSAIFTPIGIYKG---RIFAIKRIPKK-SVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        50 ~~lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~-~~~~~~~~~~E~~~-------------------------------   94 (392)
                      +.||+|+||+||+|.+..++   ..||||.+++. .....+.+.+|+.+                               
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            45999999999999976543   36999999753 44566789999988                               


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-----
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-----  164 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-----  164 (392)
                           +++......+++..+..++.|++.||.|+|++++ +||||||+|||+++++.+||+|||+++........     
T Consensus       113 ~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i-iHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~  191 (311)
T d1r0pa_         113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK  191 (311)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred             cCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc-ccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence                 4555555568889999999999999999999999 99999999999999999999999999865332111     


Q ss_pred             ----------------------cccccceeeeeee
Q psy6828         165 ----------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       165 ----------------------~~d~~s~g~~~~~  177 (392)
                                            .+|+||||+++||
T Consensus       192 ~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~E  226 (311)
T d1r0pa_         192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  226 (311)
T ss_dssp             TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccChHHHhcCCCCChhHhhhhHHHHHH
Confidence                                  1289999999998

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=200.41  Aligned_cols=133  Identities=22%  Similarity=0.297  Sum_probs=99.7

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecC-------cEEEEEEcCCCCh-hHHHHHHHHHHH---------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKG-------RIFAIKRIPKKSV-DITRAMKKELKI---------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------   94 (392)
                      +.|...+.||+|+||.||+|++..++       ..||||++++... .....+.+|...                     
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            34556678999999999999876554       4799999976543 345667777665                     


Q ss_pred             ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828          95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR  144 (392)
Q Consensus        95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~  144 (392)
                                     +++...               ...+++.++..++.||+.||.|||++++ +||||||+|||++.+
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~i-vHrDiKp~NiLl~~~  171 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTED  171 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTT
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCE-EeeeecccceeecCC
Confidence                           333222               1258999999999999999999999999 999999999999999


Q ss_pred             ceEEEeccccchhccccccc-------------------------cccccceeeeeee
Q psy6828         145 WVVKLADFGLTEFKRDAEYT-------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       145 ~~~kl~DFGla~~~~~~~~~-------------------------~~d~~s~g~~~~~  177 (392)
                      +.+||+|||+++........                         ..|+||||+++|+
T Consensus       172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~e  229 (299)
T d1fgka_         172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  229 (299)
T ss_dssp             CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHH
Confidence            99999999999865443211                         1288888888887

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.6e-25  Score=201.06  Aligned_cols=131  Identities=18%  Similarity=0.202  Sum_probs=97.4

Q ss_pred             eeccCCCCCcceeEEEEEEEeec-C--cEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYK-G--RIFAIKRIPKKSV---DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~-~--~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------   94 (392)
                      |...+.||+|+||.||+|....+ +  ..||||++.+...   ...+.+.+|+.+                         
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~   89 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT   89 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheee
Confidence            44456799999999999986543 3  3689999976532   445678999987                         


Q ss_pred             ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--
Q psy6828          95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--  163 (392)
Q Consensus        95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--  163 (392)
                               +++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......  
T Consensus        90 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i-iHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~  168 (273)
T d1u46a_          90 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY  168 (273)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEE
T ss_pred             eeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCE-eeeeecHHHhccccccceeeccchhhhhcccCCCcc
Confidence                     2333333469999999999999999999999999 9999999999999999999999999986533211  


Q ss_pred             ------------------------ccccccceeeeeee
Q psy6828         164 ------------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------------------~~~d~~s~g~~~~~  177 (392)
                                              ..+|+||||+++||
T Consensus       169 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~e  206 (273)
T d1u46a_         169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE  206 (273)
T ss_dssp             EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             eecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHH
Confidence                                    02399999999998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.7e-26  Score=210.76  Aligned_cols=154  Identities=19%  Similarity=0.239  Sum_probs=115.0

Q ss_pred             ccccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----h
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----D   83 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~   83 (392)
                      +..+..|.+......|+.-+..           +.|...+.||+|+||+||+|.+.   .+|+.||||.+++...    .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~l-----------~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~   70 (322)
T d1vzoa_           2 LLTVKHELRTANLTGHAEKVGI-----------ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAK   70 (322)
T ss_dssp             CEEEEEECCCEECSSCCCCCCG-----------GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEES
T ss_pred             cccccccccccccCCCCcccch-----------hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchH
Confidence            3456677777777777755432           22556678999999999999874   4689999999875432    1


Q ss_pred             HHHHHHHHHHH------------------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC
Q psy6828          84 ITRAMKKELKI------------------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA  127 (392)
Q Consensus        84 ~~~~~~~E~~~------------------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~  127 (392)
                      ..+.+.+|+.+                                    +++.... .+++..+..++.|++.||.|+|+++
T Consensus        71 ~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_          71 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcCC
Confidence            23345555555                                    2222222 5889999999999999999999999


Q ss_pred             cccccCCCCCceEEcCCceEEEeccccchhccccccc--------------------------cccccceeeeeee
Q psy6828         128 LRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       128 iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--------------------------~~d~~s~g~~~~~  177 (392)
                      + +||||||+|||++.++.+||+|||+++........                          ..|+||+|+++|+
T Consensus       150 i-vHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLye  224 (322)
T d1vzoa_         150 I-IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE  224 (322)
T ss_dssp             C-CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHH
T ss_pred             E-EeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHH
Confidence            9 99999999999999999999999999764322111                          1288888888888

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.8e-25  Score=205.05  Aligned_cols=114  Identities=21%  Similarity=0.232  Sum_probs=89.9

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCc-----EEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGR-----IFAIKRIPKKSV-DITRAMKKELKI-------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------   94 (392)
                      +...+.||+|+||+||+|++..+++     .||+|.+..... .....+.+|+.+                         
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  118 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEE
Confidence            4556789999999999999876554     699999875432 334567777766                         


Q ss_pred             -----------HHhhcCC----------------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE
Q psy6828          95 -----------DIMENED----------------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV  141 (392)
Q Consensus        95 -----------~~l~~~~----------------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll  141 (392)
                                 +++....                      ..+++.++..++.|++.||.|||++++ +||||||+|||+
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I-iHRDlKp~Nill  197 (325)
T d1rjba_         119 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-VHRDLAARNVLV  197 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE-EETTCSGGGEEE
T ss_pred             EEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCchhcccc
Confidence                       3333221                      248999999999999999999999999 999999999999


Q ss_pred             cCCceEEEeccccchhccc
Q psy6828         142 DSRWVVKLADFGLTEFKRD  160 (392)
Q Consensus       142 ~~~~~~kl~DFGla~~~~~  160 (392)
                      +.++.+||+|||+|+....
T Consensus       198 ~~~~~~Kl~DFGla~~~~~  216 (325)
T d1rjba_         198 THGKVVKICDFGLARDIMS  216 (325)
T ss_dssp             ETTTEEEECCCGGGSCGGG
T ss_pred             ccCCeEEEeeccccccccC
Confidence            9999999999999986544

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-25  Score=207.40  Aligned_cols=115  Identities=25%  Similarity=0.377  Sum_probs=89.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeec-CcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYK-GRIFAIKRIPKKSV--DITRAMKKELKI--------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------   94 (392)
                      +.|...+.||+|+||+||+|++..+ ++.||||+++....  .....+.+|+.+                          
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            4567777899999999999998765 67799999864321  111123334332                          


Q ss_pred             -----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828          95 -----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus        95 -----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                                       .........+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i-vHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             CceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE-EecCCCccEEEEcCCCCeeecchhhhhh
Confidence                             1112233369999999999999999999999999 9999999999999999999999999886


Q ss_pred             cc
Q psy6828         158 KR  159 (392)
Q Consensus       158 ~~  159 (392)
                      ..
T Consensus       166 ~~  167 (305)
T d1blxa_         166 YS  167 (305)
T ss_dssp             CC
T ss_pred             hc
Confidence            53

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.6e-24  Score=199.67  Aligned_cols=128  Identities=27%  Similarity=0.355  Sum_probs=101.5

Q ss_pred             cCCCCCcceeEEEEEEEeecCcE--EEEEEcCCCC-hhHHHHHHHHHHH-------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRI--FAIKRIPKKS-VDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~~-~~~~~~~~~E~~~-------------------------------   94 (392)
                      .+.||+|+||+||+|+++.+|..  ||||.++... ....+.+.+|+.+                               
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~   94 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   94 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecC
Confidence            45699999999999999988874  7788875432 2345678889888                               


Q ss_pred             -----HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 -----DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 -----~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                           +++...               ...+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus        95 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~i-iHrDlkp~NIL~~~~~~~kl~DfG~  173 (309)
T d1fvra_          95 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGL  173 (309)
T ss_dssp             TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE-ECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCc-cccccccceEEEcCCCceEEccccc
Confidence                 333221               2368999999999999999999999999 9999999999999999999999999


Q ss_pred             chhcccccc----------------------ccccccceeeeeee
Q psy6828         155 TEFKRDAEY----------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       155 a~~~~~~~~----------------------~~~d~~s~g~~~~~  177 (392)
                      ++.......                      ...|+||||+++||
T Consensus       174 a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~e  218 (309)
T d1fvra_         174 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  218 (309)
T ss_dssp             EESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             cccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHH
Confidence            975432211                      12399999999998

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=1.9e-24  Score=199.03  Aligned_cols=112  Identities=20%  Similarity=0.318  Sum_probs=91.3

Q ss_pred             eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------   94 (392)
                      .|...+.||+|+||+||+|++..+|+.||||+++.....  +.+.+|...                              
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc--HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            456677899999999999999999999999998654321  122333333                              


Q ss_pred             -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-----CceEEEeccccchhcc
Q psy6828          95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-----RWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-----~~~~kl~DFGla~~~~  159 (392)
                           +++......+++.++..++.|++.||.|||++|+ +||||||+|||++.     ++.+||+|||+|+...
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~gi-iHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          84 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL-VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE-ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCc-eeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence                 5555555579999999999999999999999999 99999999999964     5789999999998653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-24  Score=197.50  Aligned_cols=144  Identities=17%  Similarity=0.247  Sum_probs=109.1

Q ss_pred             eeeeeccccccccceeeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------
Q psy6828          30 FDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI---------   94 (392)
Q Consensus        30 v~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------   94 (392)
                      +.|...|...   .+.+...+.||+|+||.||+|...     .+++.||||++++... .....+.+|+.+         
T Consensus        12 ~~~~~~~~~~---~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn   88 (311)
T d1t46a_          12 LPYDHKWEFP---RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN   88 (311)
T ss_dssp             SCCCGGGBCC---GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             CCCcccccCC---HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC
Confidence            3455556322   123444678999999999999864     4567999999976543 445567888777         


Q ss_pred             ---------------------------HHhhc-----------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCccc
Q psy6828          95 ---------------------------DIMEN-----------------EDVKLDNMFIASLVADILRGMLYLHDSALRY  130 (392)
Q Consensus        95 ---------------------------~~l~~-----------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iii  130 (392)
                                                 +++..                 ....+++..+..++.||+.||.|||++++ +
T Consensus        89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~i-v  167 (311)
T d1t46a_          89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC-I  167 (311)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred             EEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCe-e
Confidence                                       22221                 12258999999999999999999999999 9


Q ss_pred             ccCCCCCceEEcCCceEEEeccccchhccccccc-------------------------cccccceeeeeee
Q psy6828         131 HGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-------------------------GTDQHSFLQHTYH  177 (392)
Q Consensus       131 HrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------------------------~~d~~s~g~~~~~  177 (392)
                      ||||||+|||++.++.+|++|||+++........                         ..|+||||+++|+
T Consensus       168 HrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~e  239 (311)
T d1t46a_         168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE  239 (311)
T ss_dssp             CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHH
Confidence            9999999999999999999999999875432211                         1288888888887

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.6e-24  Score=193.81  Aligned_cols=124  Identities=23%  Similarity=0.299  Sum_probs=97.4

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------   94 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------   94 (392)
                      .+.||+|+||.||+|..  +|+.||||++++..  ..+.+.+|+.+                                  
T Consensus        12 ~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~   87 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS   87 (262)
T ss_dssp             EEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred             eEEEecCCCeEEEEEEE--CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCC
Confidence            45699999999999975  58899999997653  34678889988                                  


Q ss_pred             --HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828          95 --DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY--------  163 (392)
Q Consensus        95 --~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~--------  163 (392)
                        +++... ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.+|++|||+++.......        
T Consensus        88 L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i-vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y  166 (262)
T d1byga_          88 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW  166 (262)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCSGGGEEECTTSCEEECCCCC------------CCTTT
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce-eccccchHhheecCCCCEeecccccceecCCCCccccccccC
Confidence              333221 1248999999999999999999999999 9999999999999999999999999986433221        


Q ss_pred             ------------ccccccceeeeeee
Q psy6828         164 ------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       164 ------------~~~d~~s~g~~~~~  177 (392)
                                  ..+|+||||+++||
T Consensus       167 ~aPE~l~~~~~t~~sDIwSfG~il~e  192 (262)
T d1byga_         167 TAPEALREKKFSTKSDVWSFGILLWE  192 (262)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CChHHHhCCCCChHHHHHhHHHHHHH
Confidence                        12399999999999

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4e-24  Score=202.25  Aligned_cols=133  Identities=21%  Similarity=0.236  Sum_probs=103.4

Q ss_pred             eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------
Q psy6828          44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------   94 (392)
Q Consensus        44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------   94 (392)
                      ++|...+.||+|+||+||+|.+..+|+.||||++++...  ...+++.+|+.+                           
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            557778899999999999999999999999999976543  445568888887                           


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--  162 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--  162 (392)
                                ..+......+++..++.++.|++.||.|||++|+ +||||||+|||++.++.+|++|||+++......  
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~gi-iHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~  175 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM  175 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhccc-ccccCCccccccccccceeeechhhhhcccccccc
Confidence                      0111112269999999999999999999999999 999999999999999999999999987543221  


Q ss_pred             --------------------cccccccceeeeeee
Q psy6828         163 --------------------YTGTDQHSFLQHTYH  177 (392)
Q Consensus       163 --------------------~~~~d~~s~g~~~~~  177 (392)
                                          ....|+||+|+++|+
T Consensus       176 ~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~e  210 (355)
T d2b1pa1         176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  210 (355)
T ss_dssp             -----CCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             ccccccccccChhhhcCCCCCCCcccccccchHHH
Confidence                                122389999999988

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-23  Score=193.62  Aligned_cols=105  Identities=22%  Similarity=0.299  Sum_probs=85.6

Q ss_pred             eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828          46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------   94 (392)
Q Consensus        46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------   94 (392)
                      ++..+.||+|+||.||+|+  .+|+.||||+++...   .+.+.+|.++                               
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~--~~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEE--ETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEE--ECCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            4456679999999999997  479999999996543   2334444444                               


Q ss_pred             ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc--------CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828          95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHD--------SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus        95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~--------~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                                ++++..  .+++.+...++.|++.||.|+|+        +++ +||||||+|||++.++.+||+|||+++
T Consensus        80 ~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~I-vHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI-AHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEE-ECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCe-eccccCccceEEcCCCCeEEEecCccc
Confidence                      333332  58999999999999999999996        578 999999999999999999999999988


Q ss_pred             hc
Q psy6828         157 FK  158 (392)
Q Consensus       157 ~~  158 (392)
                      ..
T Consensus       157 ~~  158 (303)
T d1vjya_         157 RH  158 (303)
T ss_dssp             EE
T ss_pred             cc
Confidence            65

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.7e-23  Score=193.93  Aligned_cols=115  Identities=20%  Similarity=0.294  Sum_probs=93.5

Q ss_pred             eeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828          45 VSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------   94 (392)
Q Consensus        45 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------   94 (392)
                      .+...+.||+|+||.||+|.+..     +++.||||++++... .....+.+|+.+                        
T Consensus        21 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  100 (308)
T d1p4oa_          21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV  100 (308)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeE
Confidence            34456789999999999998763     457899999976543 445678899998                        


Q ss_pred             --HHhhcC------------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828          95 --DIMENE------------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL  154 (392)
Q Consensus        95 --~~l~~~------------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl  154 (392)
                        +++.++                  ...+++..+..++.|++.||.|||++++ +||||||+|||++.++++||+|||+
T Consensus       101 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~i-vHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         101 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC-BCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             EEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCe-eeceEcCCceeecCCceEEEeeccc
Confidence              111111                  1146889999999999999999999999 9999999999999999999999999


Q ss_pred             chhccc
Q psy6828         155 TEFKRD  160 (392)
Q Consensus       155 a~~~~~  160 (392)
                      ++....
T Consensus       180 a~~~~~  185 (308)
T d1p4oa_         180 TRDIYE  185 (308)
T ss_dssp             CCGGGG
T ss_pred             ceeccC
Confidence            986543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=1.2e-22  Score=192.33  Aligned_cols=133  Identities=19%  Similarity=0.264  Sum_probs=103.3

Q ss_pred             ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828          43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------   94 (392)
Q Consensus        43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------   94 (392)
                      +.+|...+.||+|+||+||+|++..+|+.||||++++... ..+.+.+|+.+                            
T Consensus        12 ~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          12 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            3568888999999999999999999999999999976543 23444555543                            


Q ss_pred             ----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCc------
Q psy6828          95 ----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRW------  145 (392)
Q Consensus        95 ----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~------  145 (392)
                                            .........+++..+..++.|++.||.|||+ .|+ +||||||+|||++.++      
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~I-vHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI-IHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE-ECSCCSGGGEEEEEEETTTTEE
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCc-ccccCChhHeeeeccCcccccc
Confidence                                  1112233368999999999999999999997 889 9999999999998665      


Q ss_pred             eEEEeccccchhcccccc--------------------ccccccceeeeeee
Q psy6828         146 VVKLADFGLTEFKRDAEY--------------------TGTDQHSFLQHTYH  177 (392)
Q Consensus       146 ~~kl~DFGla~~~~~~~~--------------------~~~d~~s~g~~~~~  177 (392)
                      .+|++|||.+........                    ...|+||+|+++++
T Consensus       170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  221 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFE  221 (362)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHH
T ss_pred             eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHH
Confidence            499999999875433221                    12388888888877

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.76  E-value=1.3e-19  Score=155.61  Aligned_cols=109  Identities=16%  Similarity=0.140  Sum_probs=78.7

Q ss_pred             ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh------------------HHHHHHHHHHH---------------
Q psy6828          48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD------------------ITRAMKKELKI---------------   94 (392)
Q Consensus        48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------------------~~~~~~~E~~~---------------   94 (392)
                      .+++||+|+||+||+|.+ .+|+.||||+++.....                  ......+|...               
T Consensus         4 vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            356899999999999986 47999999987532110                  01122233332               


Q ss_pred             -------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828          95 -------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR  159 (392)
Q Consensus        95 -------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~  159 (392)
                             +++... ...++...+..++.|++.++.|||++++ +||||||+|||++++ .++|+|||+|....
T Consensus        83 ~~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~gi-iHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2          83 EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGI-VHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTE-ECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             cCCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCE-EEccCChhheeeeCC-CEEEEECCCcccCC
Confidence                   111110 1136677788999999999999999999 999999999999865 58999999986543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=4.5e-06  Score=73.74  Aligned_cols=28  Identities=7%  Similarity=0.303  Sum_probs=24.8

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        48 ~~~~~Ei~~l~~l~HpnIv~~~~~~~~~   75 (271)
T d1nvra_          48 ENIKKEICINKMLNHENVVKFYGHRREG   75 (271)
T ss_dssp             -CHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCEeeEeeeeccC
Confidence            5788999999999999999999888765

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=5.9e-05  Score=66.93  Aligned_cols=28  Identities=11%  Similarity=0.278  Sum_probs=24.5

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        53 ~~~~~E~~il~~l~HpnIv~l~~~~~~~   80 (288)
T d1uu3a_          53 PYVTRERDVMSRLDHPFFVKLYFTFQDD   80 (288)
T ss_dssp             HHHHHHHHHHHHCCSTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHcCCCCeeEEEEEEEEC
Confidence            5688999999999999999998877655

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.99  E-value=0.0015  Score=54.12  Aligned_cols=31  Identities=39%  Similarity=0.571  Sum_probs=20.5

Q ss_pred             cccccceeeccceeEEEeCCCCCCChhhHHH
Q psy6828         292 NYDVYKVETIGDAYMVVSGLPIRNGEQHAGE  322 (392)
Q Consensus       292 ~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~  322 (392)
                      .+...++|++||+||++||+|....++||..
T Consensus        53 ~~g~~~~k~iGD~~~a~~g~~~~~~~~~a~~   83 (199)
T d1azsb_          53 FSGVEKIKTIGSTYMAATGLSAIPSQEHAQE   83 (199)
T ss_dssp             GTTEEEEEEETTEEEEEESSSCC--------
T ss_pred             ccCcEEEEEecCeEEEEecCCCCcccccccc
Confidence            4667889999999999999998766666654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.26  E-value=0.066  Score=47.17  Aligned_cols=27  Identities=26%  Similarity=0.302  Sum_probs=21.8

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++++  ..++||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            3999999999999743  45899997763

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.08  E-value=0.068  Score=46.66  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=26.3

Q ss_pred             CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828         126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE  156 (392)
Q Consensus       126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~  156 (392)
                      .++ ||.|+.+.|++++.+...-+.||+.+.
T Consensus       183 ~gi-IHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGV-IHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEE-ECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccc-ccCCcchhhhhcccccceeEecccccc
Confidence            455 999999999999988777899999875

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.77  E-value=0.088  Score=47.73  Aligned_cols=30  Identities=17%  Similarity=0.105  Sum_probs=21.9

Q ss_pred             cCCCCCcceeEEEEEEEeecCcEEEEEEcC
Q psy6828          49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIP   78 (392)
Q Consensus        49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~   78 (392)
                      ..++|.|....||+..+..+++.|.+|.-.
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~   60 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAV   60 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEEC
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCC
Confidence            446899999999999877778899999754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.0081  Score=52.00  Aligned_cols=28  Identities=11%  Similarity=0.354  Sum_probs=24.5

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..|.+.
T Consensus        53 ~~~~~E~~il~~l~HpnIv~~~~~~~~~   80 (270)
T d1t4ha_          53 QRFKEEAEMLKGLQHPNIVRFYDSWEST   80 (270)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEeec
Confidence            4678999999999999999999887654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.024  Score=50.17  Aligned_cols=28  Identities=14%  Similarity=0.476  Sum_probs=25.1

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        49 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~   76 (322)
T d1s9ja_          49 NQIIRELQVLHECNSPYIVGFYGAFYSD   76 (322)
T ss_dssp             HHHHHHGGGGGGCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            5688999999999999999999888765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.018  Score=50.29  Aligned_cols=29  Identities=10%  Similarity=0.200  Sum_probs=25.6

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+.+|++|+|||||+++..|.+.
T Consensus        57 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_          57 REDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            46688999999999999999999888765

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.022  Score=49.57  Aligned_cols=29  Identities=7%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ++.+.+|+++|++|+|||||+++..+.+.
T Consensus        53 ~~~~~~E~~il~~l~HpnIv~l~~~~~~~   81 (288)
T d2jfla1          53 LEDYMVEIDILASCDHPNIVKLLDAFYYE   81 (288)
T ss_dssp             GGGTHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            46788999999999999999998877655

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.34  E-value=0.015  Score=50.70  Aligned_cols=29  Identities=14%  Similarity=0.305  Sum_probs=25.7

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+++|++|+|||||+++..|.+.
T Consensus        57 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (287)
T d1opja_          57 VEEFLKEAAVMKEIKHPNLVQLLGVCTRE   85 (287)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHHhCCCCCEecCCccEeeC
Confidence            46788999999999999999999988765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.07  E-value=0.025  Score=48.72  Aligned_cols=28  Identities=0%  Similarity=0.245  Sum_probs=24.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..|.+.
T Consensus        48 ~~~~~E~~il~~l~HpnIv~~~~~~~~~   75 (269)
T d2java1          48 QMLVSEVNLLRELKHPNIVRYYDRIIDR   75 (269)
T ss_dssp             HHHHHHHHHTTSCCCTTBCCEEEEEEC-
T ss_pred             HHHHHHHHHHHHCCCCCEeeEEEEEEeC
Confidence            4578999999999999999998887654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.03  E-value=0.018  Score=50.51  Aligned_cols=28  Identities=7%  Similarity=0.131  Sum_probs=24.7

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        72 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~   99 (299)
T d1jpaa_          72 RDFLSEASIMGQFDHPNVIHLEGVVTKS   99 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            4688999999999999999999887655

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.77  E-value=0.023  Score=50.07  Aligned_cols=28  Identities=4%  Similarity=0.275  Sum_probs=24.8

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        60 ~~~~~Ei~il~~l~HpnIv~~~~~~~~~   87 (309)
T d1u5ra_          60 QDIIKEVRFLQKLRHPNTIQYRGCYLRE   87 (309)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHCCCCCEeeEEEEEEEC
Confidence            4688999999999999999999887665

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=90.37  E-value=0.035  Score=49.76  Aligned_cols=28  Identities=7%  Similarity=0.215  Sum_probs=25.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..|.+.
T Consensus        71 ~~~~~Ei~il~~l~HpnIv~~~~~~~~~   98 (352)
T d1koba_          71 YTVKNEISIMNQLHHPKLINLHDAFEDK   98 (352)
T ss_dssp             HHHHHHHHHHTTCCSTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            4678999999999999999999988765

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.95  E-value=0.039  Score=48.38  Aligned_cols=28  Identities=7%  Similarity=0.056  Sum_probs=22.6

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        52 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~   79 (307)
T d1a06a_          52 GSMENEIAVLHKIKHPNIVALDDIYESG   79 (307)
T ss_dssp             ---CHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            5678999999999999999998877655

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.033  Score=47.63  Aligned_cols=28  Identities=11%  Similarity=0.258  Sum_probs=24.6

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        45 ~~~~~E~~~l~~l~HpnIv~~~g~~~~~   72 (262)
T d1byga_          45 QAFLAEASVMTQLRHSNLVQLLGVIVEE   72 (262)
T ss_dssp             HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEEec
Confidence            6688999999999999999998877653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.72  E-value=0.036  Score=48.30  Aligned_cols=28  Identities=14%  Similarity=0.316  Sum_probs=25.0

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..|.+.
T Consensus        62 ~~~~~E~~il~~l~HpnIv~~~~~~~~~   89 (293)
T d1yhwa1          62 ELIINEILVMRENKNPNIVNYLDSYLVG   89 (293)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCEeeEeEEEEEC
Confidence            5688999999999999999999888765

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.58  E-value=0.042  Score=46.98  Aligned_cols=28  Identities=4%  Similarity=0.223  Sum_probs=24.5

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        51 ~~~~~E~~il~~l~hpnIv~~~~~~~~~   78 (263)
T d2j4za1          51 HQLRREVEIQSHLRHPNILRLYGYFHDA   78 (263)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEEEEEEC
Confidence            4578999999999999999998887765

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.51  E-value=0.025  Score=48.90  Aligned_cols=26  Identities=15%  Similarity=0.230  Sum_probs=23.0

Q ss_pred             cccccccceeeeccccceeeeeeccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWF   37 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~   37 (392)
                      +.+.+|+++|++|+|||||+++..+.
T Consensus        53 ~~~~~E~~il~~l~HpnIv~~~g~~~   78 (277)
T d1xbba_          53 DELLAEANVMQQLDNPYIVRMIGICE   78 (277)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCCceEEEEec
Confidence            56889999999999999999987664

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.50  E-value=0.027  Score=48.24  Aligned_cols=29  Identities=10%  Similarity=0.259  Sum_probs=25.5

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      -+.+.+|++++++|+|||||+++..+.+.
T Consensus        44 ~~~~~~E~~~l~~l~HpnIv~~~g~~~~~   72 (263)
T d1sm2a_          44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   72 (263)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHHhcCCCCcccccceeccC
Confidence            36789999999999999999999887655

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.27  E-value=0.039  Score=48.05  Aligned_cols=29  Identities=7%  Similarity=0.193  Sum_probs=25.8

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+++|++|+|||||+++..|.+.
T Consensus        45 ~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~   73 (298)
T d1gz8a_          45 PSTAIREISLLKELNHPNIVKLLDVIHTE   73 (298)
T ss_dssp             CHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHhCCCCcEEEeccccccc
Confidence            35678999999999999999999988766

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=89.26  E-value=0.077  Score=44.49  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=25.1

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||++++...-|+||+.+..
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            49999999999999877778999987654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.09  E-value=0.087  Score=44.35  Aligned_cols=29  Identities=31%  Similarity=0.349  Sum_probs=24.8

Q ss_pred             ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828         129 RYHGNLKASNCLVDSRWVVKLADFGLTEF  157 (392)
Q Consensus       129 iiHrDlKp~NIll~~~~~~kl~DFGla~~  157 (392)
                      ++|+|+.|.|||+++++..-++||+.+..
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEeeccCcceeecCCceEEEeechhccc
Confidence            38999999999998876677999987754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.92  E-value=0.032  Score=48.30  Aligned_cols=28  Identities=7%  Similarity=0.074  Sum_probs=24.4

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        54 ~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_          54 VDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            3578999999999999999999877655

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.04  Score=48.66  Aligned_cols=27  Identities=4%  Similarity=0.190  Sum_probs=24.2

Q ss_pred             ccccccceeeeccccceeeeeeccccc
Q psy6828          13 SILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        13 ~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+|+++|+.++|||||+++..|.+.
T Consensus        47 ~~~~Ei~il~~l~HpnIv~~~~~~~~~   73 (321)
T d1tkia_          47 LVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             HHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            467999999999999999999888766

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.65  E-value=0.03  Score=49.34  Aligned_cols=28  Identities=21%  Similarity=0.283  Sum_probs=24.6

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        56 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~   83 (317)
T d1xkka_          56 KEILDEAYVMASVDNPHVCRLLGICLTS   83 (317)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            5688999999999999999998877654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.63  E-value=0.03  Score=48.61  Aligned_cols=26  Identities=12%  Similarity=0.271  Sum_probs=23.0

Q ss_pred             cccccccceeeeccccceeeeeeccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWF   37 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~   37 (392)
                      +.+.+|+++|++|+|||||+++..+.
T Consensus        54 ~~~~~E~~il~~l~HpnIv~l~g~~~   79 (285)
T d1u59a_          54 EEMMREAQIMHQLDNPYIVRLIGVCQ   79 (285)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCEeeEeeeec
Confidence            56889999999999999999987654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.57  E-value=0.035  Score=47.77  Aligned_cols=28  Identities=4%  Similarity=-0.006  Sum_probs=24.5

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|+.++|||||+++..+...
T Consensus        52 ~~~~~E~~~l~~~~hpniv~~~~~~~~~   79 (277)
T d1o6ya_          52 LRFRREAQNAAALNHPAIVAVYDTGEAE   79 (277)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEEEEE
T ss_pred             HHHHHHHHHHHhcCCCCCCcccceeeec
Confidence            4678999999999999999998877655

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.13  E-value=0.036  Score=47.26  Aligned_cols=30  Identities=10%  Similarity=0.226  Sum_probs=25.9

Q ss_pred             cccccccccceeeeccccceeeeeeccccc
Q psy6828          10 GLNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        10 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      ..+.+++|+.++++++|||||+++..+.+.
T Consensus        42 ~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~   71 (258)
T d1k2pa_          42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ   71 (258)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECCS
T ss_pred             CHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Confidence            346788999999999999999999877655

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.037  Score=47.55  Aligned_cols=27  Identities=15%  Similarity=0.364  Sum_probs=23.5

Q ss_pred             cccccccceeeeccccceeeeeecccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQ   38 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~   38 (392)
                      +.+.+|+.+|++|+|||||+++..+.+
T Consensus        53 ~~~~~E~~~l~~l~HpnIv~~~g~~~~   79 (272)
T d1qpca_          53 DAFLAEANLMKQLQHQRLVRLYAVVTQ   79 (272)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCEeEEEeeecc
Confidence            568999999999999999999876543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=87.80  E-value=0.05  Score=48.66  Aligned_cols=28  Identities=4%  Similarity=0.208  Sum_probs=24.7

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        68 ~~~~~E~~il~~l~HpnIv~~~~~~~~~   95 (350)
T d1koaa2          68 ETVRKEIQTMSVLRHPTLVNLHDAFEDD   95 (350)
T ss_dssp             HHHHHHHHHHHHTCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            5678999999999999999998877655

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=87.74  E-value=0.053  Score=46.74  Aligned_cols=29  Identities=7%  Similarity=0.235  Sum_probs=25.6

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+.+|++|+|||||+++..|.+.
T Consensus        44 ~~~~~~E~~il~~l~hpnIv~~~~~~~~~   72 (286)
T d1ob3a_          44 PSTTIREISILKELKHSNIVKLYDVIHTK   72 (286)
T ss_dssp             CHHHHHHHHGGGGCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCCcEEeeeeecccC
Confidence            35788999999999999999998888766

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.57  E-value=0.041  Score=47.21  Aligned_cols=27  Identities=7%  Similarity=0.195  Sum_probs=23.4

Q ss_pred             cccccccceeeeccccceeeeeecccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQ   38 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~   38 (392)
                      +.+.+|+.+|++|+|||||+++..+.+
T Consensus        53 ~~~~~E~~~l~~l~HpnIv~l~~~~~~   79 (273)
T d1mp8a_          53 EKFLQEALTMRQFDHPHIVKLIGVITE   79 (273)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            568899999999999999999887643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.15  E-value=0.062  Score=47.24  Aligned_cols=28  Identities=4%  Similarity=0.130  Sum_probs=24.8

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.+|++|+|||||+++..+.+.
T Consensus        49 ~~~~~E~~il~~l~HpnIv~~~~~~~~~   76 (316)
T d1fota_          49 EHTNDERLMLSIVTHPFIIRMWGTFQDA   76 (316)
T ss_dssp             HHHHHHHHHHHSCCBTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhccCcChhheeeeEeeC
Confidence            5678999999999999999998887765

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.71  E-value=0.043  Score=48.18  Aligned_cols=28  Identities=7%  Similarity=0.216  Sum_probs=24.6

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..|.+.
T Consensus        73 ~~~~~E~~~l~~l~HpnIv~~~g~~~~~  100 (311)
T d1r0pa_          73 SQFLTEGIIMKDFSHPNVLSLLGICLRS  100 (311)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCCCEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCEeEEeEEEEec
Confidence            5689999999999999999998877654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.46  E-value=0.056  Score=46.93  Aligned_cols=29  Identities=7%  Similarity=0.205  Sum_probs=25.4

Q ss_pred             cccccccceeeeccccceeeeeecccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      +.+++|+.+|++++|||||+++..+.+..
T Consensus        45 ~~~~~Ei~il~~l~hpnIv~~~~~~~~~~   73 (299)
T d1ua2a_          45 RTALREIKLLQELSHPNIIGLLDAFGHKS   73 (299)
T ss_dssp             THHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHHHHHHHHHhCCCCCEeEEEeeeccCC
Confidence            46789999999999999999998887663

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.41  E-value=0.051  Score=46.80  Aligned_cols=27  Identities=7%  Similarity=0.085  Sum_probs=22.9

Q ss_pred             ccccccccceeeeccccceeeeeeccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWF   37 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~   37 (392)
                      .+.+.+|+.+|++|+|||||+++....
T Consensus        48 ~~~~~~E~~~l~~l~HpnIv~~~~~~~   74 (276)
T d1uwha_          48 LQAFKNEVGVLRKTRHVNILLFMGYST   74 (276)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeeeEEEe
Confidence            367889999999999999999976543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=0.053  Score=46.58  Aligned_cols=27  Identities=11%  Similarity=0.337  Sum_probs=23.2

Q ss_pred             cccccccceeeeccccceeeeeecccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQ   38 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~   38 (392)
                      +.+.+|+.+|++|+|||||+++..+.+
T Consensus        56 ~~~~~Ei~~l~~l~H~nIv~~~g~~~~   82 (273)
T d1u46a_          56 DDFIREVNAMHSLDHRNLIRLYGVVLT   82 (273)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            568999999999999999999875543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.44  E-value=0.1  Score=45.49  Aligned_cols=29  Identities=3%  Similarity=0.044  Sum_probs=24.6

Q ss_pred             ccccccccceeeec-cccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLV-DNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+++|++| +|||||+++..+.+.
T Consensus        54 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~   83 (309)
T d1fvra_          54 HRDFAGELEVLCKLGHHPNIINLLGACEHR   83 (309)
T ss_dssp             -CHHHHHHHHHTTCCCCTTBCCEEEEEEET
T ss_pred             HHHHHHHHHHHHhccCCCCEeeEEEEEecC
Confidence            45789999999999 799999998887755

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.00  E-value=0.11  Score=46.07  Aligned_cols=29  Identities=10%  Similarity=0.077  Sum_probs=25.6

Q ss_pred             ccccccccceeeeccccceeeeeeccccc
Q psy6828          11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+.+|+.+|+.++|||||+++..|.+.
T Consensus        49 ~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   77 (337)
T d1o6la_          49 VAHTVTESRVLQNTRHPFLTALKYAFQTH   77 (337)
T ss_dssp             HHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEeeeccc
Confidence            35678999999999999999999888876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.20  E-value=0.074  Score=45.99  Aligned_cols=28  Identities=18%  Similarity=0.356  Sum_probs=24.3

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+.++++++|||||+++..+.++
T Consensus        57 ~~~~~E~~~l~~l~h~nIv~~~g~~~~~   84 (285)
T d1fmka3          57 EAFLQEAQVMKKLRHEKLVQLYAVVSEE   84 (285)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHhcccCCEeEEEEEEecC
Confidence            6789999999999999999998876543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=83.87  E-value=0.12  Score=44.32  Aligned_cols=27  Identities=11%  Similarity=0.263  Sum_probs=24.0

Q ss_pred             ccccccceeeecc-ccceeeeeeccccc
Q psy6828          13 SILRQSTVVKLVD-NHKLFDWFCSWFQN   39 (392)
Q Consensus        13 ~~~~E~~~l~~l~-hpniv~~~~~~~~~   39 (392)
                      .+.+|+.+|++|+ |||||+++..+.++
T Consensus        55 ~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_          55 ATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             HHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5789999999998 99999999888766

>d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: GGDEF domain
domain: Response regulator PleD, C-terminal domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=82.65  E-value=2.8  Score=31.63  Aligned_cols=58  Identities=19%  Similarity=0.177  Sum_probs=42.5

Q ss_pred             CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828         220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS  278 (392)
Q Consensus       220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~  278 (392)
                      ...+++..||.+|..+.+....+..-.+|..+-+.+...+...+ .+-.+-||.+..++
T Consensus        26 ~~~~l~~i~id~~~~in~~~G~~~~d~ll~~~a~~l~~~~~~~d-~~~R~~~~~F~il~   83 (162)
T d1w25a3          26 DPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAID-LPCRYGGEEFVVIM   83 (162)
T ss_dssp             CCCEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHTSCTTS-EEEECSSSEEEEEE
T ss_pred             CCEEEEEeccccchhccccccccccchhhhhhhhhhhhccCCcc-eeeecCCCeEEEEe
Confidence            45688999999999998888877777777777777777766544 46666666665443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.57  E-value=0.16  Score=45.17  Aligned_cols=28  Identities=18%  Similarity=0.189  Sum_probs=24.3

Q ss_pred             cccccccceeeeccccceeeeeeccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      +.+.+|+++|++|+|||||+++..+.+.
T Consensus        86 ~~~~~E~~il~~l~hpnIv~~~~~~~~~  113 (350)
T d1rdqe_          86 EHTLNEKRILQAVNFPFLVKLEFSFKDN  113 (350)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             HHHHHHHHHHHHcCCCcEeecccccccc
Confidence            5678999999999999999998877655

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.66  E-value=0.14  Score=44.62  Aligned_cols=27  Identities=19%  Similarity=0.247  Sum_probs=24.0

Q ss_pred             ccccccceeeeccccceeeeeeccccc
Q psy6828          13 SILRQSTVVKLVDNHKLFDWFCSWFQN   39 (392)
Q Consensus        13 ~~~~E~~~l~~l~hpniv~~~~~~~~~   39 (392)
                      .+.+|+.++++++|||||+++..+...
T Consensus        69 ~~~~E~~il~~l~h~nIv~~~~~~~~~   95 (308)
T d1p4oa_          69 EFLNEASVMKEFNCHHVVRLLGVVSQG   95 (308)
T ss_dssp             HHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             HHHHHHHHHHHcCCCCEeeeeeEEecC
Confidence            478999999999999999998877655

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.14  E-value=0.12  Score=44.85  Aligned_cols=29  Identities=10%  Similarity=0.138  Sum_probs=25.5

Q ss_pred             cccccccceeeeccccceeeeeecccccc
Q psy6828          12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV   40 (392)
Q Consensus        12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~   40 (392)
                      +.+.+|+.+|++|+||||++++..|.+..
T Consensus        61 ~~~~~E~~il~~l~h~niv~~~~~~~~~~   89 (301)
T d1lufa_          61 ADFQREAALMAEFDNPNIVKLLGVCAVGK   89 (301)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             HHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence            46899999999999999999998887653